MD08G1123300.v1.1
BZIP Family

Basic leucine zipper

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
11387543 .. 11390896
3354 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1123300.v1.1.491

Sequence Viewer

Length: 1041 bp
ATGGAGCAAAAGCCGGCTTGCGATGTGTCGGTGCACTCCCAAACGGCGTCGTCTCCCTTCGAATTGAAGCGGGAGTTTTCTCTTGGCGAGGCCTTGGAGTACTTAATGGACAAGTCCATGATCGGTCAGGAGGGCGCTGATACTCAAGGGCACCAGGATGAAAAAATGGACGAATATTGGGCGAAGTACCGGAATTTCGCCAGTGCAGATGTATTTTCCGGCGATGTTTGCGCCGGCGACCTCAGCTTCGCTTTCAAAAATGAGGATATAATGGATGGGTTTTCAAGCTTTGGTGAACTGACAGAGACCCTACTCTGCACTCAAAATCTCACTCCAAAAAACTCCTGCATCTCGGCAACCATGGATTCCCAGTCATCGATTTGTGTTGGCTGTCCAACATCGGCTGCTAAACCGATTGGCAGAGATAACCAAGCAAGAGGAGCCTACAGTGGCTCATCCGGAGAACAATCCGATGAGGATGATTTTGAGATGGAATTTGGTCCATGTGGAGACAGCACAGACCCCCTCGATATAAAACGCATTAGAAGGATGGTCTCAAACAGGGAGTCTGCTAGGCGATCAAGAAGAAGAAAGCAAGCACATCTGGCGGAGCTCGAGTTGCAGGCTGAACAACTGAGACGAGAAAATTCAACCCTATGTATGCAGCTTACGGATGCTTCTCAACAGTTCCGTGACGCTGATACAAATAATAGAGTATTGAAATCGGACGTGGAAGCCTTGAAAGCCAAGGTGAAGCTAGCTGAAGATCTGGTTGCTCGGGTCTCGATAACCTCTAGTTTGAATCAAATTCTTCAAGGTCATCTAGGCACGCCGCAACCACTCAACCCTCACAATGTGCGCGGGGTAGCAGCACACGTCTCACCAACCATTACGGTTCACGGACAGGATGCTCCGTATGCTGGAATTGCAGTCTCTGGACAGAACGCAGGCCTTGGACTCGGAAATGCTGGTATGGCTAATAGCAATCTGAGTAACCTGATGATGAGCGATACTGTTAGCTGTGTCTCGGATATGTGGTGA

Protein Analysis

347

Amino Acids

37.61

Weight (kDa)

4.93

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 178 - 223 4.2e-11 bZIP transcription factor
bZIP_2 PF07716 179 - 223 4.2e-06 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 150
AccII CGCG 1 cut(s) 861
AccIII TCCGGA 1 cut(s) 458
AciI CCGC 4 cut(s) 70, 608, 833, 861
AcsI RAATTY 4 cut(s) 193, 494, 646, 807
AcuI CTGAAG 1 cut(s) 783
AcyI GRCGYC 1 cut(s) 47
AdeI CACNNNGTG 1 cut(s) 856
AfaI GTAC 2 cut(s) 101, 188
AfiI CCNNNNNNNGG 1 cut(s) 920
AflIII ACRYGT 1 cut(s) 874
AgsI TTSAA 8 cut(s) 67, 256, 285, 651, 721, 742, 802, 815
AjiI CACGTC 2 cut(s) 730, 877
AjnI CCWGG 1 cut(s) 153
AluBI AGCT 7 cut(s) 246, 288, 613, 667, 757, 761, 1020
AluI AGCT 7 cut(s) 246, 288, 613, 667, 757, 761, 1020
Alw21I GWGCWC 2 cut(s) 36, 615
Alw26I GTCTC 9 cut(s) 57, 299, 504, 559, 631, 787, 883, 937, 1030
Alw44I GTGCAC 1 cut(s) 32
AlwNI CAGNNNCTG 1 cut(s) 935
Ama87I CYCGRG 2 cut(s) 614, 777
Aor13HI TCCGGA 1 cut(s) 458
AoxI GGCC 2 cut(s) 90, 949
ApaLI GTGCAC 1 cut(s) 32
ApeKI GCWGC 3 cut(s) 404, 664, 869
ApoI RAATTY 4 cut(s) 193, 494, 646, 807
ArsI GACNNNNNNTTYG 4 cut(s) 230, 262, 551, 583
AspLEI GCGC 3 cut(s) 137, 233, 861
AspS9I GGNCC 1 cut(s) 500
AsuHPI GGTGA 3 cut(s) 305, 763, 873
AsuII TTCGAA 1 cut(s) 60
AsuNHI GCTAGC 1 cut(s) 757
AvaI CYCGRG 2 cut(s) 614, 777
AvaII GGWCC 1 cut(s) 500
BaeGI GKGCMC 2 cut(s) 36, 153
BanI GGYRCC 1 cut(s) 150
BanII GRGCYC 1 cut(s) 615
Bbv12I GWGCWC 2 cut(s) 36, 615
BbvCI CCTCAGC 1 cut(s) 242
BbvI GCAGC 3 cut(s) 391, 676, 881
BccI CCATC 3 cut(s) 269, 484, 544
BceAI ACGGC 1 cut(s) 60
BciT130I CCWGG 1 cut(s) 155
BcoDI GTCTC 9 cut(s) 57, 299, 504, 559, 631, 787, 883, 937, 1030
BfaI CTAG 4 cut(s) 573, 758, 795, 824
BfmI CTRYAG 1 cut(s) 445
BfoI RGCGCY 1 cut(s) 138
BglII AGATCT 1 cut(s) 766
BisI GCNGC 4 cut(s) 405, 665, 833, 870
BlsI GCNGC 4 cut(s) 406, 666, 834, 871
BmcAI AGTACT 1 cut(s) 101
Bme1390I CCNGG 1 cut(s) 155
Bme18I GGWCC 1 cut(s) 500
BmeT110I CYCGRG 2 cut(s) 614, 777
BmgBI CACGTC 2 cut(s) 730, 877
BmgT120I GGNCC 1 cut(s) 500
BmiI GGNNCC 2 cut(s) 152, 442
BmrFI CCNGG 1 cut(s) 155
BmrI ACTGGG 1 cut(s) 364
BmsI GCATC 3 cut(s) 357, 664, 898
BmtI GCTAGC 1 cut(s) 761
BmuI ACTGGG 1 cut(s) 364
Bpu10I CCTNAGC 1 cut(s) 242
Bpu14I TTCGAA 1 cut(s) 60
BpuEI CTTGAG 1 cut(s) 129
Bsa29I ATCGAT 1 cut(s) 377
BsaHI GRCGYC 1 cut(s) 47
BsaI GGTCTC 3 cut(s) 299, 559, 787
BsaJI CCNNGG 4 cut(s) 93, 360, 747, 952
BsaWI WCCGGW 2 cut(s) 189, 458
BsaXI ACNNNNNCTCC 2 cut(s) 602, 632
Bsc4I CCNNNNNNNGG 1 cut(s) 920
Bse118I RCCGGY 2 cut(s) 13, 233
Bse1I ACTGG 2 cut(s) 201, 370
BseAI TCCGGA 1 cut(s) 458
BseBI CCWGG 1 cut(s) 155
BseCI ATCGAT 1 cut(s) 377
BseDI CCNNGG 4 cut(s) 93, 360, 747, 952
BseGI GGATG 7 cut(s) 163, 280, 455, 484, 555, 679, 913
BseLI CCNNNNNNNGG 1 cut(s) 920
BseMII CTCAG 3 cut(s) 256, 626, 980
BseNI ACTGG 2 cut(s) 201, 370
BseRI GAGGAG 1 cut(s) 453
BseSI GKGCMC 2 cut(s) 36, 153
BseXI GCAGC 3 cut(s) 391, 676, 881
BsgI GTGCAG 2 cut(s) 225, 301
Bsh1236I CGCG 1 cut(s) 861
BshFI GGCC 2 cut(s) 92, 951
BshNI GGYRCC 1 cut(s) 150
BshVI ATCGAT 1 cut(s) 377
BsiHKAI GWGCWC 2 cut(s) 36, 615
BsiHKCI CYCGRG 2 cut(s) 614, 777
BsiSI CCGG 5 cut(s) 14, 190, 219, 234, 459
BslI CCNNNNNNNGG 1 cut(s) 920
BsmAI GTCTC 9 cut(s) 57, 299, 504, 559, 631, 787, 883, 937, 1030
BsmBI CGTCTC 3 cut(s) 57, 631, 883
BsnI GGCC 2 cut(s) 92, 951
Bso31I GGTCTC 3 cut(s) 299, 559, 787
BsoBI CYCGRG 2 cut(s) 614, 777
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 3 cut(s) 36, 153, 615
Bsp13I TCCGGA 1 cut(s) 458
Bsp143I GATC 3 cut(s) 120, 578, 766
Bsp19I CCATGG 1 cut(s) 360
BspACI CCGC 4 cut(s) 70, 608, 833, 861
BspANI GGCC 2 cut(s) 92, 951
BspCNI CTCAG 3 cut(s) 255, 627, 981
BspDI ATCGAT 1 cut(s) 377
BspEI TCCGGA 1 cut(s) 458
BspFNI CGCG 1 cut(s) 861
BspLI GGNNCC 2 cut(s) 152, 442
BspOI GCTAGC 1 cut(s) 761
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 150
BspTNI GGTCTC 3 cut(s) 299, 559, 787
BsrFI RCCGGY 2 cut(s) 13, 233
BsrI ACTGG 2 cut(s) 201, 370
BssAI RCCGGY 2 cut(s) 13, 233
BssECI CCNNGG 4 cut(s) 93, 360, 747, 952
BssMI GATC 3 cut(s) 120, 578, 766
BssNI GRCGYC 1 cut(s) 47
BssT1I CCWWGG 4 cut(s) 93, 360, 747, 952
Bst2UI CCWGG 1 cut(s) 155
Bst4CI ACNGT 4 cut(s) 449, 687, 895, 1015
BstACI GRCGYC 1 cut(s) 47
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 8 cut(s) 15, 19, 235, 597, 624, 759, 830, 949
BstDEI CTNAG 3 cut(s) 242, 635, 989
BstDSI CCRYGG 1 cut(s) 360
BstF5I GGATG 7 cut(s) 163, 280, 455, 484, 555, 679, 913
BstFNI CGCG 1 cut(s) 861
BstH2I RGCGCY 1 cut(s) 138
BstHHI GCGC 3 cut(s) 137, 233, 861
BstKTI GATC 3 cut(s) 123, 581, 769
BstMAI GTCTC 9 cut(s) 57, 299, 504, 559, 631, 787, 883, 937, 1030
BstMBI GATC 3 cut(s) 120, 578, 766
BstMWI GCNNNNNNNGC 9 cut(s) 228, 243, 440, 605, 619, 743, 917, 926, 974
BstNI CCWGG 1 cut(s) 155
BstSCI CCNGG 1 cut(s) 153
BstSFI CTRYAG 1 cut(s) 445
BstSLI GKGCMC 2 cut(s) 36, 153
BstUI CGCG 1 cut(s) 861
BstV1I GCAGC 3 cut(s) 391, 676, 881
BstX2I RGATCY 1 cut(s) 766
BstYI RGATCY 1 cut(s) 766
Bsu15I ATCGAT 1 cut(s) 377
BsuRI GGCC 2 cut(s) 92, 951
BsuTUI ATCGAT 1 cut(s) 377
BtgI CCRYGG 1 cut(s) 360
BtgZI GCGATG 2 cut(s) 36, 237
BtrI CACGTC 2 cut(s) 730, 877
BtsCI GGATG 7 cut(s) 163, 280, 455, 484, 555, 679, 913
BtsIMutI CAGTG 2 cut(s) 208, 454
Cac8I GCNNGC 8 cut(s) 15, 19, 235, 597, 624, 759, 830, 949
CaiI CAGNNNCTG 1 cut(s) 935
CfoI GCGC 3 cut(s) 137, 233, 861
Cfr10I RCCGGY 2 cut(s) 13, 233
Cfr13I GGNCC 1 cut(s) 500
ClaI ATCGAT 1 cut(s) 377
CseI GACGC 2 cut(s) 36, 704
Csp6I GTAC 2 cut(s) 100, 187
CviAII CATG 3 cut(s) 118, 361, 504
CviQI GTAC 2 cut(s) 100, 187
DdeI CTNAG 3 cut(s) 242, 635, 989
DpnI GATC 3 cut(s) 122, 580, 768
DpnII GATC 3 cut(s) 120, 578, 766
DraIII CACNNNGTG 1 cut(s) 856
EciI GGCGGA 1 cut(s) 623
Ecl136II GAGCTC 1 cut(s) 613
Eco130I CCWWGG 4 cut(s) 93, 360, 747, 952
Eco147I AGGCCT 2 cut(s) 92, 951
Eco24I GRGCYC 1 cut(s) 615
Eco31I GGTCTC 3 cut(s) 299, 559, 787
Eco47I GGWCC 1 cut(s) 500
Eco53kI GAGCTC 1 cut(s) 613
Eco57I CTGAAG 1 cut(s) 783
Eco88I CYCGRG 2 cut(s) 614, 777
EcoICRI GAGCTC 1 cut(s) 613
EcoRII CCWGG 1 cut(s) 153
EcoT14I CCWWGG 4 cut(s) 93, 360, 747, 952
EcoT38I GRGCYC 1 cut(s) 615
ErhI CCWWGG 4 cut(s) 93, 360, 747, 952
Esp3I CGTCTC 3 cut(s) 57, 631, 883
FaeI CATG 3 cut(s) 121, 364, 507
FatI CATG 3 cut(s) 117, 360, 503
FauI CCCGC 2 cut(s) 63, 854
Fnu4HI GCNGC 4 cut(s) 405, 665, 833, 870
FokI GGATG 7 cut(s) 170, 287, 442, 491, 562, 686, 920
FriOI GRGCYC 1 cut(s) 615
Fsp4HI GCNGC 4 cut(s) 405, 665, 833, 870
FspBI CTAG 4 cut(s) 573, 758, 795, 824
GlaI GCGC 3 cut(s) 136, 232, 860
GluI GCNGC 4 cut(s) 405, 665, 833, 870
HaeII RGCGCY 1 cut(s) 138
HaeIII GGCC 2 cut(s) 92, 951
HapII CCGG 5 cut(s) 14, 190, 219, 234, 459
HgaI GACGC 2 cut(s) 36, 704
HhaI GCGC 3 cut(s) 137, 233, 861
Hin1I GRCGYC 1 cut(s) 47
Hin1II CATG 3 cut(s) 121, 364, 507
Hin6I GCGC 3 cut(s) 135, 231, 859
HinP1I GCGC 3 cut(s) 135, 231, 859
HindIII AAGCTT 1 cut(s) 286
HinfI GANTC 4 cut(s) 365, 566, 802, 957
HpaII CCGG 5 cut(s) 14, 190, 219, 234, 459
HphI GGTGA 3 cut(s) 305, 763, 873
Hpy166II GTNNAC 3 cut(s) 34, 296, 898
Hpy188I TCNGA 5 cut(s) 472, 727, 962, 990, 1030
Hpy188III TCNNGA 5 cut(s) 128, 459, 582, 784, 936
Hpy8I GTNNAC 3 cut(s) 34, 296, 898
Hpy99I CGWCG 1 cut(s) 52
HpyAV CCTTC 2 cut(s) 67, 540
HpyCH4III ACNGT 4 cut(s) 449, 687, 895, 1015
HpyCH4IV ACGT 2 cut(s) 729, 876
HpyCH4V TGCA 7 cut(s) 34, 206, 318, 348, 622, 664, 929
HpyF10VI GCNNNNNNNGC 9 cut(s) 228, 243, 440, 605, 619, 743, 917, 926, 974
HpyF3I CTNAG 3 cut(s) 242, 635, 989
HpySE526I ACGT 2 cut(s) 729, 876
Hsp92I GRCGYC 1 cut(s) 47
Hsp92II CATG 3 cut(s) 121, 364, 507
HspAI GCGC 3 cut(s) 135, 231, 859
Kpn2I TCCGGA 1 cut(s) 458
KroI GCCGGC 2 cut(s) 13, 233
KroNI GCCGGC 2 cut(s) 15, 235
Kzo9I GATC 3 cut(s) 120, 578, 766
LmnI GCTCC 4 cut(s) 4, 440, 610, 916
Lsp1109I GCAGC 3 cut(s) 391, 676, 881
LweI GCATC 3 cut(s) 357, 664, 898
MaeI CTAG 4 cut(s) 573, 758, 795, 824
MaeII ACGT 2 cut(s) 729, 876
MaeIII GTNAC 2 cut(s) 692, 992
MalI GATC 3 cut(s) 122, 580, 768
MboI GATC 3 cut(s) 120, 578, 766
MboII GAAGA 4 cut(s) 597, 600, 776, 803
MflI RGATCY 1 cut(s) 766
MhlI GDGCHC 3 cut(s) 36, 153, 615
MluCI AATT 6 cut(s) 62, 193, 494, 646, 807, 924
MlyI GAGTC 2 cut(s) 575, 951
MmeI TCCRAC 1 cut(s) 419
MnlI CCTC 9 cut(s) 82, 124, 251, 256, 431, 469, 536, 802, 858
MreI CGCCGGCG 1 cut(s) 233
MroI TCCGGA 1 cut(s) 458
MroNI GCCGGC 2 cut(s) 13, 233
MseI TTAA 1 cut(s) 104
MslI CAYNNNNRTG 1 cut(s) 156
MspI CCGG 5 cut(s) 14, 190, 219, 234, 459
MspR9I CCNGG 1 cut(s) 155
MvaI CCWGG 1 cut(s) 155
MvnI CGCG 1 cut(s) 861
MwoI GCNNNNNNNGC 9 cut(s) 228, 243, 440, 605, 619, 743, 917, 926, 974
NaeI GCCGGC 2 cut(s) 15, 235
NcoI CCATGG 1 cut(s) 360
NdeII GATC 3 cut(s) 120, 578, 766
NgoMIV GCCGGC 2 cut(s) 13, 233
NheI GCTAGC 1 cut(s) 757
NlaIII CATG 3 cut(s) 121, 364, 507
NlaIV GGNNCC 2 cut(s) 152, 442
NmeAIII GCCGAG 1 cut(s) 332
NmuCI GTSAC 1 cut(s) 692
NspV TTCGAA 1 cut(s) 60
PaeR7I CTCGAG 1 cut(s) 614
PceI AGGCCT 2 cut(s) 92, 951
PdiI GCCGGC 2 cut(s) 15, 235
PfeI GAWTC 2 cut(s) 365, 802
PkrI GCNGC 4 cut(s) 406, 666, 834, 871
PleI GAGTC 2 cut(s) 574, 951
PpsI GAGTC 2 cut(s) 574, 951
Psp124BI GAGCTC 1 cut(s) 615
Psp6I CCWGG 1 cut(s) 153
PspGI CCWGG 1 cut(s) 153
PspN4I GGNNCC 2 cut(s) 152, 442
PspPI GGNCC 1 cut(s) 500
PspXI VCTCGAGB 1 cut(s) 614
PstNI CAGNNNCTG 1 cut(s) 935
PsuI RGATCY 1 cut(s) 766
RsaI GTAC 2 cut(s) 101, 188
RsaNI GTAC 2 cut(s) 100, 187
RseI CAYNNNNRTG 1 cut(s) 156
SacI GAGCTC 1 cut(s) 615
SaqAI TTAA 1 cut(s) 104
SatI GCNGC 4 cut(s) 405, 665, 833, 870
Sau3AI GATC 3 cut(s) 120, 578, 766
Sau96I GGNCC 1 cut(s) 500
ScaI AGTACT 1 cut(s) 101
SchI GAGTC 2 cut(s) 575, 951
ScrFI CCNGG 1 cut(s) 155
SduI GDGCHC 3 cut(s) 36, 153, 615
SfaNI GCATC 3 cut(s) 357, 664, 898
SfcI CTRYAG 1 cut(s) 445
Sfr274I CTCGAG 1 cut(s) 614
SfuI TTCGAA 1 cut(s) 60
SgrAI CRCCGGYG 1 cut(s) 233
SinI GGWCC 1 cut(s) 500
SlaI CTCGAG 1 cut(s) 614
SmiMI CAYNNNNRTG 1 cut(s) 156
SmlI CTYRAG 2 cut(s) 144, 614
SmoI CTYRAG 2 cut(s) 144, 614
Sse9I AATT 6 cut(s) 62, 193, 494, 646, 807, 924
SseBI AGGCCT 2 cut(s) 92, 951
SsiI CCGC 4 cut(s) 70, 608, 833, 861
SspI AATATT 1 cut(s) 176
SspMI CTAG 4 cut(s) 573, 758, 795, 824
SstI GAGCTC 1 cut(s) 615
StuI AGGCCT 2 cut(s) 92, 951
StyD4I CCNGG 1 cut(s) 153
StyI CCWWGG 4 cut(s) 93, 360, 747, 952
TaaI ACNGT 4 cut(s) 449, 687, 895, 1015
TaiI ACGT 2 cut(s) 732, 879
TaqI TCGA 5 cut(s) 60, 377, 528, 615, 785
TaqII GACCGA 1 cut(s) 113
TasI AATT 6 cut(s) 62, 193, 494, 646, 807, 924
TatI WGTACW 1 cut(s) 99
TauI GCSGC 1 cut(s) 835
TfiI GAWTC 2 cut(s) 365, 802
Tru1I TTAA 1 cut(s) 104
Tru9I TTAA 1 cut(s) 104
TscAI CASTG 2 cut(s) 208, 454
TseFI GTSAC 1 cut(s) 692
TseI GCWGC 3 cut(s) 404, 664, 869
Tsp45I GTSAC 1 cut(s) 692
TspDTI ATGAA 1 cut(s) 174
TspGWI ACGGA 4 cut(s) 680, 686, 903, 915
TspRI CASTG 2 cut(s) 208, 454
VneI GTGCAC 1 cut(s) 32
VpaK11BI GGWCC 1 cut(s) 500
XapI RAATTY 4 cut(s) 193, 494, 646, 807
XhoI CTCGAG 1 cut(s) 614
XspI CTAG 4 cut(s) 573, 758, 795, 824
ZrmI AGTACT 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.