Basic leucine zipper
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G24800 |
| fragaria_vesca | FvH4_2g36400 FvH4_2g36400 FvH4_2g36400 |
| malus_domestica | MD08G1123300.v1.1 MD15G1102300.v1.1 |
| prunus_persica | Prupe.1G455300_v2.0.a1 |
| pyrus_communis | pycom08g10240 pycom08g10250 pycom15g09350 |
| rosa_chinensis | RchiOBHm_Chr6g0305501 |
| rosa_laevigata | RLG00000010886 |
| rosa_multiflora | Rmu_sc0001809.1_g000001 Rmu_sc0002810.1_g000001 Rmu_sc0004319.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00162750 |
| rosa_rugosa | Rorug06G0340700.1 |
| rosa_samantha | Rh6AG452800 Rh6BG449000 Rh6CG466500 Rh6DG453200 |
| rosa_wichuraiana | Rw6G039460 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 150 |
| AccII | CGCG | 1 cut(s) | 861 |
| AccIII | TCCGGA | 1 cut(s) | 458 |
| AciI | CCGC | 4 cut(s) | 70, 608, 833, 861 |
| AcsI | RAATTY | 4 cut(s) | 193, 494, 646, 807 |
| AcuI | CTGAAG | 1 cut(s) | 783 |
| AcyI | GRCGYC | 1 cut(s) | 47 |
| AdeI | CACNNNGTG | 1 cut(s) | 856 |
| AfaI | GTAC | 2 cut(s) | 101, 188 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 920 |
| AflIII | ACRYGT | 1 cut(s) | 874 |
| AgsI | TTSAA | 8 cut(s) | 67, 256, 285, 651, 721, 742, 802, 815 |
| AjiI | CACGTC | 2 cut(s) | 730, 877 |
| AjnI | CCWGG | 1 cut(s) | 153 |
| AluBI | AGCT | 7 cut(s) | 246, 288, 613, 667, 757, 761, 1020 |
| AluI | AGCT | 7 cut(s) | 246, 288, 613, 667, 757, 761, 1020 |
| Alw21I | GWGCWC | 2 cut(s) | 36, 615 |
| Alw26I | GTCTC | 9 cut(s) | 57, 299, 504, 559, 631, 787, 883, 937, 1030 |
| Alw44I | GTGCAC | 1 cut(s) | 32 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 935 |
| Ama87I | CYCGRG | 2 cut(s) | 614, 777 |
| Aor13HI | TCCGGA | 1 cut(s) | 458 |
| AoxI | GGCC | 2 cut(s) | 90, 949 |
| ApaLI | GTGCAC | 1 cut(s) | 32 |
| ApeKI | GCWGC | 3 cut(s) | 404, 664, 869 |
| ApoI | RAATTY | 4 cut(s) | 193, 494, 646, 807 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 230, 262, 551, 583 |
| AspLEI | GCGC | 3 cut(s) | 137, 233, 861 |
| AspS9I | GGNCC | 1 cut(s) | 500 |
| AsuHPI | GGTGA | 3 cut(s) | 305, 763, 873 |
| AsuII | TTCGAA | 1 cut(s) | 60 |
| AsuNHI | GCTAGC | 1 cut(s) | 757 |
| AvaI | CYCGRG | 2 cut(s) | 614, 777 |
| AvaII | GGWCC | 1 cut(s) | 500 |
| BaeGI | GKGCMC | 2 cut(s) | 36, 153 |
| BanI | GGYRCC | 1 cut(s) | 150 |
| BanII | GRGCYC | 1 cut(s) | 615 |
| Bbv12I | GWGCWC | 2 cut(s) | 36, 615 |
| BbvCI | CCTCAGC | 1 cut(s) | 242 |
| BbvI | GCAGC | 3 cut(s) | 391, 676, 881 |
| BccI | CCATC | 3 cut(s) | 269, 484, 544 |
| BceAI | ACGGC | 1 cut(s) | 60 |
| BciT130I | CCWGG | 1 cut(s) | 155 |
| BcoDI | GTCTC | 9 cut(s) | 57, 299, 504, 559, 631, 787, 883, 937, 1030 |
| BfaI | CTAG | 4 cut(s) | 573, 758, 795, 824 |
| BfmI | CTRYAG | 1 cut(s) | 445 |
| BfoI | RGCGCY | 1 cut(s) | 138 |
| BglII | AGATCT | 1 cut(s) | 766 |
| BisI | GCNGC | 4 cut(s) | 405, 665, 833, 870 |
| BlsI | GCNGC | 4 cut(s) | 406, 666, 834, 871 |
| BmcAI | AGTACT | 1 cut(s) | 101 |
| Bme1390I | CCNGG | 1 cut(s) | 155 |
| Bme18I | GGWCC | 1 cut(s) | 500 |
| BmeT110I | CYCGRG | 2 cut(s) | 614, 777 |
| BmgBI | CACGTC | 2 cut(s) | 730, 877 |
| BmgT120I | GGNCC | 1 cut(s) | 500 |
| BmiI | GGNNCC | 2 cut(s) | 152, 442 |
| BmrFI | CCNGG | 1 cut(s) | 155 |
| BmrI | ACTGGG | 1 cut(s) | 364 |
| BmsI | GCATC | 3 cut(s) | 357, 664, 898 |
| BmtI | GCTAGC | 1 cut(s) | 761 |
| BmuI | ACTGGG | 1 cut(s) | 364 |
| Bpu10I | CCTNAGC | 1 cut(s) | 242 |
| Bpu14I | TTCGAA | 1 cut(s) | 60 |
| BpuEI | CTTGAG | 1 cut(s) | 129 |
| Bsa29I | ATCGAT | 1 cut(s) | 377 |
| BsaHI | GRCGYC | 1 cut(s) | 47 |
| BsaI | GGTCTC | 3 cut(s) | 299, 559, 787 |
| BsaJI | CCNNGG | 4 cut(s) | 93, 360, 747, 952 |
| BsaWI | WCCGGW | 2 cut(s) | 189, 458 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 602, 632 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 920 |
| Bse118I | RCCGGY | 2 cut(s) | 13, 233 |
| Bse1I | ACTGG | 2 cut(s) | 201, 370 |
| BseAI | TCCGGA | 1 cut(s) | 458 |
| BseBI | CCWGG | 1 cut(s) | 155 |
| BseCI | ATCGAT | 1 cut(s) | 377 |
| BseDI | CCNNGG | 4 cut(s) | 93, 360, 747, 952 |
| BseGI | GGATG | 7 cut(s) | 163, 280, 455, 484, 555, 679, 913 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 920 |
| BseMII | CTCAG | 3 cut(s) | 256, 626, 980 |
| BseNI | ACTGG | 2 cut(s) | 201, 370 |
| BseRI | GAGGAG | 1 cut(s) | 453 |
| BseSI | GKGCMC | 2 cut(s) | 36, 153 |
| BseXI | GCAGC | 3 cut(s) | 391, 676, 881 |
| BsgI | GTGCAG | 2 cut(s) | 225, 301 |
| Bsh1236I | CGCG | 1 cut(s) | 861 |
| BshFI | GGCC | 2 cut(s) | 92, 951 |
| BshNI | GGYRCC | 1 cut(s) | 150 |
| BshVI | ATCGAT | 1 cut(s) | 377 |
| BsiHKAI | GWGCWC | 2 cut(s) | 36, 615 |
| BsiHKCI | CYCGRG | 2 cut(s) | 614, 777 |
| BsiSI | CCGG | 5 cut(s) | 14, 190, 219, 234, 459 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 920 |
| BsmAI | GTCTC | 9 cut(s) | 57, 299, 504, 559, 631, 787, 883, 937, 1030 |
| BsmBI | CGTCTC | 3 cut(s) | 57, 631, 883 |
| BsnI | GGCC | 2 cut(s) | 92, 951 |
| Bso31I | GGTCTC | 3 cut(s) | 299, 559, 787 |
| BsoBI | CYCGRG | 2 cut(s) | 614, 777 |
| Bsp119I | TTCGAA | 1 cut(s) | 60 |
| Bsp1286I | GDGCHC | 3 cut(s) | 36, 153, 615 |
| Bsp13I | TCCGGA | 1 cut(s) | 458 |
| Bsp143I | GATC | 3 cut(s) | 120, 578, 766 |
| Bsp19I | CCATGG | 1 cut(s) | 360 |
| BspACI | CCGC | 4 cut(s) | 70, 608, 833, 861 |
| BspANI | GGCC | 2 cut(s) | 92, 951 |
| BspCNI | CTCAG | 3 cut(s) | 255, 627, 981 |
| BspDI | ATCGAT | 1 cut(s) | 377 |
| BspEI | TCCGGA | 1 cut(s) | 458 |
| BspFNI | CGCG | 1 cut(s) | 861 |
| BspLI | GGNNCC | 2 cut(s) | 152, 442 |
| BspOI | GCTAGC | 1 cut(s) | 761 |
| BspT104I | TTCGAA | 1 cut(s) | 60 |
| BspT107I | GGYRCC | 1 cut(s) | 150 |
| BspTNI | GGTCTC | 3 cut(s) | 299, 559, 787 |
| BsrFI | RCCGGY | 2 cut(s) | 13, 233 |
| BsrI | ACTGG | 2 cut(s) | 201, 370 |
| BssAI | RCCGGY | 2 cut(s) | 13, 233 |
| BssECI | CCNNGG | 4 cut(s) | 93, 360, 747, 952 |
| BssMI | GATC | 3 cut(s) | 120, 578, 766 |
| BssNI | GRCGYC | 1 cut(s) | 47 |
| BssT1I | CCWWGG | 4 cut(s) | 93, 360, 747, 952 |
| Bst2UI | CCWGG | 1 cut(s) | 155 |
| Bst4CI | ACNGT | 4 cut(s) | 449, 687, 895, 1015 |
| BstACI | GRCGYC | 1 cut(s) | 47 |
| BstBI | TTCGAA | 1 cut(s) | 60 |
| BstC8I | GCNNGC | 8 cut(s) | 15, 19, 235, 597, 624, 759, 830, 949 |
| BstDEI | CTNAG | 3 cut(s) | 242, 635, 989 |
| BstDSI | CCRYGG | 1 cut(s) | 360 |
| BstF5I | GGATG | 7 cut(s) | 163, 280, 455, 484, 555, 679, 913 |
| BstFNI | CGCG | 1 cut(s) | 861 |
| BstH2I | RGCGCY | 1 cut(s) | 138 |
| BstHHI | GCGC | 3 cut(s) | 137, 233, 861 |
| BstKTI | GATC | 3 cut(s) | 123, 581, 769 |
| BstMAI | GTCTC | 9 cut(s) | 57, 299, 504, 559, 631, 787, 883, 937, 1030 |
| BstMBI | GATC | 3 cut(s) | 120, 578, 766 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 228, 243, 440, 605, 619, 743, 917, 926, 974 |
| BstNI | CCWGG | 1 cut(s) | 155 |
| BstSCI | CCNGG | 1 cut(s) | 153 |
| BstSFI | CTRYAG | 1 cut(s) | 445 |
| BstSLI | GKGCMC | 2 cut(s) | 36, 153 |
| BstUI | CGCG | 1 cut(s) | 861 |
| BstV1I | GCAGC | 3 cut(s) | 391, 676, 881 |
| BstX2I | RGATCY | 1 cut(s) | 766 |
| BstYI | RGATCY | 1 cut(s) | 766 |
| Bsu15I | ATCGAT | 1 cut(s) | 377 |
| BsuRI | GGCC | 2 cut(s) | 92, 951 |
| BsuTUI | ATCGAT | 1 cut(s) | 377 |
| BtgI | CCRYGG | 1 cut(s) | 360 |
| BtgZI | GCGATG | 2 cut(s) | 36, 237 |
| BtrI | CACGTC | 2 cut(s) | 730, 877 |
| BtsCI | GGATG | 7 cut(s) | 163, 280, 455, 484, 555, 679, 913 |
| BtsIMutI | CAGTG | 2 cut(s) | 208, 454 |
| Cac8I | GCNNGC | 8 cut(s) | 15, 19, 235, 597, 624, 759, 830, 949 |
| CaiI | CAGNNNCTG | 1 cut(s) | 935 |
| CfoI | GCGC | 3 cut(s) | 137, 233, 861 |
| Cfr10I | RCCGGY | 2 cut(s) | 13, 233 |
| Cfr13I | GGNCC | 1 cut(s) | 500 |
| ClaI | ATCGAT | 1 cut(s) | 377 |
| CseI | GACGC | 2 cut(s) | 36, 704 |
| Csp6I | GTAC | 2 cut(s) | 100, 187 |
| CviAII | CATG | 3 cut(s) | 118, 361, 504 |
| CviQI | GTAC | 2 cut(s) | 100, 187 |
| DdeI | CTNAG | 3 cut(s) | 242, 635, 989 |
| DpnI | GATC | 3 cut(s) | 122, 580, 768 |
| DpnII | GATC | 3 cut(s) | 120, 578, 766 |
| DraIII | CACNNNGTG | 1 cut(s) | 856 |
| EciI | GGCGGA | 1 cut(s) | 623 |
| Ecl136II | GAGCTC | 1 cut(s) | 613 |
| Eco130I | CCWWGG | 4 cut(s) | 93, 360, 747, 952 |
| Eco147I | AGGCCT | 2 cut(s) | 92, 951 |
| Eco24I | GRGCYC | 1 cut(s) | 615 |
| Eco31I | GGTCTC | 3 cut(s) | 299, 559, 787 |
| Eco47I | GGWCC | 1 cut(s) | 500 |
| Eco53kI | GAGCTC | 1 cut(s) | 613 |
| Eco57I | CTGAAG | 1 cut(s) | 783 |
| Eco88I | CYCGRG | 2 cut(s) | 614, 777 |
| EcoICRI | GAGCTC | 1 cut(s) | 613 |
| EcoRII | CCWGG | 1 cut(s) | 153 |
| EcoT14I | CCWWGG | 4 cut(s) | 93, 360, 747, 952 |
| EcoT38I | GRGCYC | 1 cut(s) | 615 |
| ErhI | CCWWGG | 4 cut(s) | 93, 360, 747, 952 |
| Esp3I | CGTCTC | 3 cut(s) | 57, 631, 883 |
| FaeI | CATG | 3 cut(s) | 121, 364, 507 |
| FatI | CATG | 3 cut(s) | 117, 360, 503 |
| FauI | CCCGC | 2 cut(s) | 63, 854 |
| Fnu4HI | GCNGC | 4 cut(s) | 405, 665, 833, 870 |
| FokI | GGATG | 7 cut(s) | 170, 287, 442, 491, 562, 686, 920 |
| FriOI | GRGCYC | 1 cut(s) | 615 |
| Fsp4HI | GCNGC | 4 cut(s) | 405, 665, 833, 870 |
| FspBI | CTAG | 4 cut(s) | 573, 758, 795, 824 |
| GlaI | GCGC | 3 cut(s) | 136, 232, 860 |
| GluI | GCNGC | 4 cut(s) | 405, 665, 833, 870 |
| HaeII | RGCGCY | 1 cut(s) | 138 |
| HaeIII | GGCC | 2 cut(s) | 92, 951 |
| HapII | CCGG | 5 cut(s) | 14, 190, 219, 234, 459 |
| HgaI | GACGC | 2 cut(s) | 36, 704 |
| HhaI | GCGC | 3 cut(s) | 137, 233, 861 |
| Hin1I | GRCGYC | 1 cut(s) | 47 |
| Hin1II | CATG | 3 cut(s) | 121, 364, 507 |
| Hin6I | GCGC | 3 cut(s) | 135, 231, 859 |
| HinP1I | GCGC | 3 cut(s) | 135, 231, 859 |
| HindIII | AAGCTT | 1 cut(s) | 286 |
| HinfI | GANTC | 4 cut(s) | 365, 566, 802, 957 |
| HpaII | CCGG | 5 cut(s) | 14, 190, 219, 234, 459 |
| HphI | GGTGA | 3 cut(s) | 305, 763, 873 |
| Hpy166II | GTNNAC | 3 cut(s) | 34, 296, 898 |
| Hpy188I | TCNGA | 5 cut(s) | 472, 727, 962, 990, 1030 |
| Hpy188III | TCNNGA | 5 cut(s) | 128, 459, 582, 784, 936 |
| Hpy8I | GTNNAC | 3 cut(s) | 34, 296, 898 |
| Hpy99I | CGWCG | 1 cut(s) | 52 |
| HpyAV | CCTTC | 2 cut(s) | 67, 540 |
| HpyCH4III | ACNGT | 4 cut(s) | 449, 687, 895, 1015 |
| HpyCH4IV | ACGT | 2 cut(s) | 729, 876 |
| HpyCH4V | TGCA | 7 cut(s) | 34, 206, 318, 348, 622, 664, 929 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 228, 243, 440, 605, 619, 743, 917, 926, 974 |
| HpyF3I | CTNAG | 3 cut(s) | 242, 635, 989 |
| HpySE526I | ACGT | 2 cut(s) | 729, 876 |
| Hsp92I | GRCGYC | 1 cut(s) | 47 |
| Hsp92II | CATG | 3 cut(s) | 121, 364, 507 |
| HspAI | GCGC | 3 cut(s) | 135, 231, 859 |
| Kpn2I | TCCGGA | 1 cut(s) | 458 |
| KroI | GCCGGC | 2 cut(s) | 13, 233 |
| KroNI | GCCGGC | 2 cut(s) | 15, 235 |
| Kzo9I | GATC | 3 cut(s) | 120, 578, 766 |
| LmnI | GCTCC | 4 cut(s) | 4, 440, 610, 916 |
| Lsp1109I | GCAGC | 3 cut(s) | 391, 676, 881 |
| LweI | GCATC | 3 cut(s) | 357, 664, 898 |
| MaeI | CTAG | 4 cut(s) | 573, 758, 795, 824 |
| MaeII | ACGT | 2 cut(s) | 729, 876 |
| MaeIII | GTNAC | 2 cut(s) | 692, 992 |
| MalI | GATC | 3 cut(s) | 122, 580, 768 |
| MboI | GATC | 3 cut(s) | 120, 578, 766 |
| MboII | GAAGA | 4 cut(s) | 597, 600, 776, 803 |
| MflI | RGATCY | 1 cut(s) | 766 |
| MhlI | GDGCHC | 3 cut(s) | 36, 153, 615 |
| MluCI | AATT | 6 cut(s) | 62, 193, 494, 646, 807, 924 |
| MlyI | GAGTC | 2 cut(s) | 575, 951 |
| MmeI | TCCRAC | 1 cut(s) | 419 |
| MnlI | CCTC | 9 cut(s) | 82, 124, 251, 256, 431, 469, 536, 802, 858 |
| MreI | CGCCGGCG | 1 cut(s) | 233 |
| MroI | TCCGGA | 1 cut(s) | 458 |
| MroNI | GCCGGC | 2 cut(s) | 13, 233 |
| MseI | TTAA | 1 cut(s) | 104 |
| MslI | CAYNNNNRTG | 1 cut(s) | 156 |
| MspI | CCGG | 5 cut(s) | 14, 190, 219, 234, 459 |
| MspR9I | CCNGG | 1 cut(s) | 155 |
| MvaI | CCWGG | 1 cut(s) | 155 |
| MvnI | CGCG | 1 cut(s) | 861 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 228, 243, 440, 605, 619, 743, 917, 926, 974 |
| NaeI | GCCGGC | 2 cut(s) | 15, 235 |
| NcoI | CCATGG | 1 cut(s) | 360 |
| NdeII | GATC | 3 cut(s) | 120, 578, 766 |
| NgoMIV | GCCGGC | 2 cut(s) | 13, 233 |
| NheI | GCTAGC | 1 cut(s) | 757 |
| NlaIII | CATG | 3 cut(s) | 121, 364, 507 |
| NlaIV | GGNNCC | 2 cut(s) | 152, 442 |
| NmeAIII | GCCGAG | 1 cut(s) | 332 |
| NmuCI | GTSAC | 1 cut(s) | 692 |
| NspV | TTCGAA | 1 cut(s) | 60 |
| PaeR7I | CTCGAG | 1 cut(s) | 614 |
| PceI | AGGCCT | 2 cut(s) | 92, 951 |
| PdiI | GCCGGC | 2 cut(s) | 15, 235 |
| PfeI | GAWTC | 2 cut(s) | 365, 802 |
| PkrI | GCNGC | 4 cut(s) | 406, 666, 834, 871 |
| PleI | GAGTC | 2 cut(s) | 574, 951 |
| PpsI | GAGTC | 2 cut(s) | 574, 951 |
| Psp124BI | GAGCTC | 1 cut(s) | 615 |
| Psp6I | CCWGG | 1 cut(s) | 153 |
| PspGI | CCWGG | 1 cut(s) | 153 |
| PspN4I | GGNNCC | 2 cut(s) | 152, 442 |
| PspPI | GGNCC | 1 cut(s) | 500 |
| PspXI | VCTCGAGB | 1 cut(s) | 614 |
| PstNI | CAGNNNCTG | 1 cut(s) | 935 |
| PsuI | RGATCY | 1 cut(s) | 766 |
| RsaI | GTAC | 2 cut(s) | 101, 188 |
| RsaNI | GTAC | 2 cut(s) | 100, 187 |
| RseI | CAYNNNNRTG | 1 cut(s) | 156 |
| SacI | GAGCTC | 1 cut(s) | 615 |
| SaqAI | TTAA | 1 cut(s) | 104 |
| SatI | GCNGC | 4 cut(s) | 405, 665, 833, 870 |
| Sau3AI | GATC | 3 cut(s) | 120, 578, 766 |
| Sau96I | GGNCC | 1 cut(s) | 500 |
| ScaI | AGTACT | 1 cut(s) | 101 |
| SchI | GAGTC | 2 cut(s) | 575, 951 |
| ScrFI | CCNGG | 1 cut(s) | 155 |
| SduI | GDGCHC | 3 cut(s) | 36, 153, 615 |
| SfaNI | GCATC | 3 cut(s) | 357, 664, 898 |
| SfcI | CTRYAG | 1 cut(s) | 445 |
| Sfr274I | CTCGAG | 1 cut(s) | 614 |
| SfuI | TTCGAA | 1 cut(s) | 60 |
| SgrAI | CRCCGGYG | 1 cut(s) | 233 |
| SinI | GGWCC | 1 cut(s) | 500 |
| SlaI | CTCGAG | 1 cut(s) | 614 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 156 |
| SmlI | CTYRAG | 2 cut(s) | 144, 614 |
| SmoI | CTYRAG | 2 cut(s) | 144, 614 |
| Sse9I | AATT | 6 cut(s) | 62, 193, 494, 646, 807, 924 |
| SseBI | AGGCCT | 2 cut(s) | 92, 951 |
| SsiI | CCGC | 4 cut(s) | 70, 608, 833, 861 |
| SspI | AATATT | 1 cut(s) | 176 |
| SspMI | CTAG | 4 cut(s) | 573, 758, 795, 824 |
| SstI | GAGCTC | 1 cut(s) | 615 |
| StuI | AGGCCT | 2 cut(s) | 92, 951 |
| StyD4I | CCNGG | 1 cut(s) | 153 |
| StyI | CCWWGG | 4 cut(s) | 93, 360, 747, 952 |
| TaaI | ACNGT | 4 cut(s) | 449, 687, 895, 1015 |
| TaiI | ACGT | 2 cut(s) | 732, 879 |
| TaqI | TCGA | 5 cut(s) | 60, 377, 528, 615, 785 |
| TaqII | GACCGA | 1 cut(s) | 113 |
| TasI | AATT | 6 cut(s) | 62, 193, 494, 646, 807, 924 |
| TatI | WGTACW | 1 cut(s) | 99 |
| TauI | GCSGC | 1 cut(s) | 835 |
| TfiI | GAWTC | 2 cut(s) | 365, 802 |
| Tru1I | TTAA | 1 cut(s) | 104 |
| Tru9I | TTAA | 1 cut(s) | 104 |
| TscAI | CASTG | 2 cut(s) | 208, 454 |
| TseFI | GTSAC | 1 cut(s) | 692 |
| TseI | GCWGC | 3 cut(s) | 404, 664, 869 |
| Tsp45I | GTSAC | 1 cut(s) | 692 |
| TspDTI | ATGAA | 1 cut(s) | 174 |
| TspGWI | ACGGA | 4 cut(s) | 680, 686, 903, 915 |
| TspRI | CASTG | 2 cut(s) | 208, 454 |
| VneI | GTGCAC | 1 cut(s) | 32 |
| VpaK11BI | GGWCC | 1 cut(s) | 500 |
| XapI | RAATTY | 4 cut(s) | 193, 494, 646, 807 |
| XhoI | CTCGAG | 1 cut(s) | 614 |
| XspI | CTAG | 4 cut(s) | 573, 758, 795, 824 |
| ZrmI | AGTACT | 1 cut(s) | 101 |