MD15G1102300.v1.1
BZIP Family

Basic leucine zipper

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
7237154 .. 7239997
2844 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1102300.v1.1.491

Sequence Viewer

Length: 1050 bp
ATGGAGCAAAAGCCCCGTTTCCACGTGGAGGTACACTCCCAAACAGCCTCGTCCCCCTTCGAATTGAAGCGGAGCCCGTCGGAGGTTTGTCTTGGCGAGGCCCTGGAGTACTTACTGGAGAAGCCCATGATCGGTCAGGAGGCCGCCGATACGCAAGGGCACCGCGATGAAAAAATCGGCGAACTTCGGGCCAGAGACCGGGGTTTCGCCGATACGGATGTATTTTTCGGCGACGTCTGCGCCGGCGACCACAGCTTCGGTTTCCAAAATCGGGATATAATGAATGGTTTTTCAAGCAGTGAACTGACAGAAACCCTACTCTGCACTCAAAATCTCACTCCAAAAAACTCCTGCATCTCAGCAGCCATGGATTCCCAGTCATCGATTTGTGTGGGCAGTCCAACATCGGCTGCTAAACCGATTGGAGGAGATAACCAAGCAAGAGGAGCCTACAGTGGTTCCTCCGGAGAACAATCGGACGAGGATGATTTCGAGATAGAAGTTAGTCCGTGTGGAGACAGCACAGAACCGCTCGACATCAAACGCATTAGAAGGAAGGTCTCGAACAGGGAGTCTGCTAGGCGATCAAGAAGACGAAAGCAAGCACATCTTGCGGATCTCGAGTCACAGGTTGAACAACTGAGAGGAGAAAATTCAACCTTATATAGGCAGCTAACGGATGCTTTTCAACAGTTCCGTGACGCTGATACAAACAATAGAGTAATGAAATCGGATGTGGAAGCCTTGAGAGCCAAGGTGAAGCTAGCTGAAGATATGGTTGCTCGGGGCTCAATGACCTCTAATTTGAATCAAATTCTTCAAGGTCATCTAGGCACGCCGCAACCACTCAACCCTCAAAATTTTCGCGGGGTAGCAGCACTCGTCTCACCGACTATTACCATCCATGGAGAGGATGCTCCGTATGCTGGAATTGCAGTCTCCGGTGAGAATGCAAGCTTTGGACTCGGAAATGCTGGTATGGCGAATAGCAATCTGAGTAATCGGATGATGAGCGATACTGTTAGCTGTGTCTCGGATATGTGGTCATAA

Protein Analysis

350

Amino Acids

38.05

Weight (kDa)

5.15

Isoelectric Point (pI)

45.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bZIP_1 PF00170 180 - 225 3.9e-13 bZIP transcription factor
bZIP_2 PF07716 181 - 225 1.8e-08 Basic region leucine zipper
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 237
AccB1I GGYRCC 1 cut(s) 159
AccBSI CCGCTC 1 cut(s) 532
AccII CGCG 2 cut(s) 165, 867
AccIII TCCGGA 1 cut(s) 464
AciI CCGC 7 cut(s) 70, 144, 163, 530, 614, 839, 867
AclWI GGATC 1 cut(s) 624
AcsI RAATTY 3 cut(s) 652, 813, 859
AcuI CTGAAG 1 cut(s) 789
AcvI CACGTG 1 cut(s) 25
AcyI GRCGYC 1 cut(s) 234
AfaI GTAC 2 cut(s) 33, 110
AfiI CCNNNNNNNGG 9 cut(s) 28, 82, 131, 198, 271, 425, 666, 910, 926
AgsI TTSAA 7 cut(s) 67, 294, 635, 657, 689, 808, 821
AjnI CCWGG 1 cut(s) 102
AluBI AGCT 6 cut(s) 255, 673, 763, 767, 957, 1026
AluI AGCT 6 cut(s) 255, 673, 763, 767, 957, 1026
Alw26I GTCTC 6 cut(s) 189, 510, 565, 889, 943, 1036
AlwI GGATC 1 cut(s) 624
Ama87I CYCGRG 2 cut(s) 620, 783
Aor13HI TCCGGA 1 cut(s) 464
AoxI GGCC 3 cut(s) 99, 141, 189
ApeKI GCWGC 4 cut(s) 362, 410, 670, 875
ApoI RAATTY 3 cut(s) 652, 813, 859
ArsI GACNNNNNNTTYG 8 cut(s) 188, 220, 239, 271, 557, 589, 787, 819
AspLEI GCGC 1 cut(s) 242
AspS9I GGNCC 2 cut(s) 100, 189
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 3 cut(s) 769, 879, 956
AsuII TTCGAA 1 cut(s) 60
AsuNHI GCTAGC 1 cut(s) 763
AvaI CYCGRG 2 cut(s) 620, 783
BaeGI GKGCMC 1 cut(s) 162
BaeI ACNNNNGTAYC 2 cut(s) 204, 237
BanI GGYRCC 1 cut(s) 159
BanII GRGCYC 2 cut(s) 77, 791
BbrPI CACGTG 1 cut(s) 25
BbsI GAAGAC 1 cut(s) 598
BbvI GCAGC 4 cut(s) 374, 397, 682, 887
BccI CCATC 1 cut(s) 908
BciT130I CCWGG 1 cut(s) 104
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 6 cut(s) 189, 510, 565, 889, 943, 1036
BfaI CTAG 3 cut(s) 579, 764, 830
BfmI CTRYAG 1 cut(s) 451
BisI GCNGC 6 cut(s) 144, 363, 411, 671, 839, 876
BlsI GCNGC 6 cut(s) 145, 364, 412, 672, 840, 877
BmcAI AGTACT 1 cut(s) 110
Bme1390I CCNGG 2 cut(s) 104, 200
BmeT110I CYCGRG 2 cut(s) 620, 783
BmgT120I GGNCC 2 cut(s) 100, 189
BmiI GGNNCC 4 cut(s) 74, 161, 448, 460
BmrFI CCNGG 2 cut(s) 104, 200
BmrI ACTGGG 1 cut(s) 370
BmsI GCATC 3 cut(s) 363, 670, 904
BmtI GCTAGC 1 cut(s) 767
BmuI ACTGGG 1 cut(s) 370
BpiI GAAGAC 1 cut(s) 598
BplI GAGNNNNNCTC 2 cut(s) 20, 52
BpmI CTGGAG 2 cut(s) 125, 137
Bpu14I TTCGAA 1 cut(s) 60
BpuEI CTTGAG 1 cut(s) 766
BpuMI CCSGG 1 cut(s) 200
Bsa29I ATCGAT 1 cut(s) 383
BsaAI YACGTR 1 cut(s) 25
BsaHI GRCGYC 1 cut(s) 234
BsaI GGTCTC 2 cut(s) 189, 565
BsaJI CCNNGG 5 cut(s) 102, 199, 366, 753, 904
BsaWI WCCGGW 2 cut(s) 464, 941
Bsc4I CCNNNNNNNGG 9 cut(s) 28, 82, 131, 198, 271, 425, 666, 910, 926
Bse118I RCCGGY 1 cut(s) 242
Bse1I ACTGG 2 cut(s) 120, 376
BseAI TCCGGA 1 cut(s) 464
BseBI CCWGG 1 cut(s) 104
BseCI ATCGAT 1 cut(s) 383
BseDI CCNNGG 5 cut(s) 102, 199, 366, 753, 904
BseGI GGATG 7 cut(s) 223, 490, 685, 739, 900, 919, 1011
BseLI CCNNNNNNNGG 9 cut(s) 28, 82, 131, 198, 271, 425, 666, 910, 926
BseMII CTCAG 3 cut(s) 372, 632, 986
BseNI ACTGG 2 cut(s) 120, 376
BseRI GAGGAG 3 cut(s) 441, 459, 660
BseSI GKGCMC 1 cut(s) 162
BseXI GCAGC 4 cut(s) 374, 397, 682, 887
BsgI GTGCAG 1 cut(s) 307
Bsh1236I CGCG 2 cut(s) 165, 867
BshFI GGCC 3 cut(s) 101, 143, 191
BshNI GGYRCC 1 cut(s) 159
BshVI ATCGAT 1 cut(s) 383
BsiHKCI CYCGRG 2 cut(s) 620, 783
BsiSI CCGG 4 cut(s) 199, 243, 465, 942
BslFI GGGAC 1 cut(s) 37
BslI CCNNNNNNNGG 9 cut(s) 28, 82, 131, 198, 271, 425, 666, 910, 926
BsmAI GTCTC 6 cut(s) 189, 510, 565, 889, 943, 1036
BsmBI CGTCTC 1 cut(s) 889
BsmFI GGGAC 1 cut(s) 37
BsmI GAATGC 1 cut(s) 955
BsnI GGCC 3 cut(s) 101, 143, 191
Bso31I GGTCTC 2 cut(s) 189, 565
BsoBI CYCGRG 2 cut(s) 620, 783
Bsp119I TTCGAA 1 cut(s) 60
Bsp1286I GDGCHC 3 cut(s) 77, 162, 791
Bsp13I TCCGGA 1 cut(s) 464
Bsp143I GATC 3 cut(s) 129, 584, 616
Bsp19I CCATGG 2 cut(s) 366, 904
BspACI CCGC 7 cut(s) 70, 144, 163, 530, 614, 839, 867
BspANI GGCC 3 cut(s) 101, 143, 191
BspCNI CTCAG 3 cut(s) 371, 633, 987
BspDI ATCGAT 1 cut(s) 383
BspEI TCCGGA 1 cut(s) 464
BspFNI CGCG 2 cut(s) 165, 867
BspLI GGNNCC 4 cut(s) 74, 161, 448, 460
BspOI GCTAGC 1 cut(s) 767
BspPI GGATC 1 cut(s) 624
BspT104I TTCGAA 1 cut(s) 60
BspT107I GGYRCC 1 cut(s) 159
BspTNI GGTCTC 2 cut(s) 189, 565
BsrBI CCGCTC 1 cut(s) 532
BsrFI RCCGGY 1 cut(s) 242
BsrI ACTGG 2 cut(s) 120, 376
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 5 cut(s) 102, 199, 366, 753, 904
BssMI GATC 3 cut(s) 129, 584, 616
BssNI GRCGYC 1 cut(s) 234
BssT1I CCWWGG 3 cut(s) 366, 753, 904
Bst2UI CCWGG 1 cut(s) 104
Bst4CI ACNGT 3 cut(s) 455, 693, 1021
BstACI GRCGYC 1 cut(s) 234
BstAPI GCANNNNNTGC 1 cut(s) 611
BstBAI YACGTR 1 cut(s) 25
BstBI TTCGAA 1 cut(s) 60
BstC8I GCNNGC 5 cut(s) 244, 603, 765, 836, 955
BstDEI CTNAG 3 cut(s) 358, 641, 995
BstDSI CCRYGG 2 cut(s) 366, 904
BstENI CCTNNNNNAGG 1 cut(s) 664
BstF5I GGATG 7 cut(s) 223, 490, 685, 739, 900, 919, 1011
BstFNI CGCG 2 cut(s) 165, 867
BstHHI GCGC 1 cut(s) 242
BstKTI GATC 3 cut(s) 132, 587, 619
BstMAI GTCTC 6 cut(s) 189, 510, 565, 889, 943, 1036
BstMBI GATC 3 cut(s) 129, 584, 616
BstMWI GCNNNNNNNGC 8 cut(s) 237, 252, 446, 611, 749, 923, 932, 980
BstNI CCWGG 1 cut(s) 104
BstSCI CCNGG 2 cut(s) 102, 198
BstSFI CTRYAG 1 cut(s) 451
BstSLI GKGCMC 1 cut(s) 162
BstUI CGCG 2 cut(s) 165, 867
BstV1I GCAGC 4 cut(s) 374, 397, 682, 887
BstV2I GAAGAC 1 cut(s) 598
BstX2I RGATCY 1 cut(s) 616
BstYI RGATCY 1 cut(s) 616
Bsu15I ATCGAT 1 cut(s) 383
BsuRI GGCC 3 cut(s) 101, 143, 191
BsuTUI ATCGAT 1 cut(s) 383
BtgI CCRYGG 2 cut(s) 366, 904
BtgZI GCGATG 1 cut(s) 180
BtsCI GGATG 7 cut(s) 223, 490, 685, 739, 900, 919, 1011
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 2 cut(s) 304, 460
Cac8I GCNNGC 5 cut(s) 244, 603, 765, 836, 955
CfoI GCGC 1 cut(s) 242
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 2 cut(s) 100, 189
ClaI ATCGAT 1 cut(s) 383
CseI GACGC 1 cut(s) 710
Csp6I GTAC 2 cut(s) 32, 109
CviAII CATG 3 cut(s) 127, 367, 905
CviQI GTAC 2 cut(s) 32, 109
DdeI CTNAG 3 cut(s) 358, 641, 995
DpnI GATC 3 cut(s) 131, 586, 618
DpnII GATC 3 cut(s) 129, 584, 616
Eco130I CCWWGG 3 cut(s) 366, 753, 904
Eco24I GRGCYC 2 cut(s) 77, 791
Eco31I GGTCTC 2 cut(s) 189, 565
Eco57I CTGAAG 1 cut(s) 789
Eco72I CACGTG 1 cut(s) 25
Eco88I CYCGRG 2 cut(s) 620, 783
EcoNI CCTNNNNNAGG 1 cut(s) 664
EcoO109I RGGNCCY 1 cut(s) 100
EcoRII CCWGG 1 cut(s) 102
EcoT14I CCWWGG 3 cut(s) 366, 753, 904
EcoT38I GRGCYC 2 cut(s) 77, 791
ErhI CCWWGG 3 cut(s) 366, 753, 904
Esp3I CGTCTC 1 cut(s) 889
FaeI CATG 3 cut(s) 130, 370, 908
FalI AAGNNNNNCTT 2 cut(s) 594, 626
FaqI GGGAC 1 cut(s) 37
FatI CATG 3 cut(s) 126, 366, 904
FauI CCCGC 1 cut(s) 860
Fnu4HI GCNGC 6 cut(s) 144, 363, 411, 671, 839, 876
FokI GGATG 7 cut(s) 230, 497, 692, 746, 887, 926, 1018
FriOI GRGCYC 2 cut(s) 77, 791
Fsp4HI GCNGC 6 cut(s) 144, 363, 411, 671, 839, 876
FspBI CTAG 3 cut(s) 579, 764, 830
GlaI GCGC 1 cut(s) 241
GluI GCNGC 6 cut(s) 144, 363, 411, 671, 839, 876
GsuI CTGGAG 2 cut(s) 125, 137
HaeIII GGCC 3 cut(s) 101, 143, 191
HapII CCGG 4 cut(s) 199, 243, 465, 942
HgaI GACGC 1 cut(s) 710
HhaI GCGC 1 cut(s) 242
Hin1I GRCGYC 1 cut(s) 234
Hin1II CATG 3 cut(s) 130, 370, 908
Hin6I GCGC 1 cut(s) 240
HinP1I GCGC 1 cut(s) 240
HindIII AAGCTT 1 cut(s) 955
HinfI GANTC 5 cut(s) 371, 572, 623, 808, 963
HpaII CCGG 4 cut(s) 199, 243, 465, 942
HphI GGTGA 3 cut(s) 769, 879, 956
Hpy166II GTNNAC 2 cut(s) 34, 302
Hpy188I TCNGA 7 cut(s) 82, 478, 733, 968, 996, 1005, 1036
Hpy188III TCNNGA 7 cut(s) 137, 272, 465, 493, 562, 588, 620
Hpy8I GTNNAC 2 cut(s) 34, 302
Hpy99I CGWCG 2 cut(s) 82, 236
HpyAV CCTTC 3 cut(s) 67, 546, 550
HpyCH4III ACNGT 3 cut(s) 455, 693, 1021
HpyCH4IV ACGT 2 cut(s) 24, 234
HpyCH4V TGCA 4 cut(s) 324, 354, 935, 953
HpyF10VI GCNNNNNNNGC 8 cut(s) 237, 252, 446, 611, 749, 923, 932, 980
HpyF3I CTNAG 3 cut(s) 358, 641, 995
HpySE526I ACGT 2 cut(s) 24, 234
Hsp92I GRCGYC 1 cut(s) 234
Hsp92II CATG 3 cut(s) 130, 370, 908
HspAI GCGC 1 cut(s) 240
Kpn2I TCCGGA 1 cut(s) 464
KroI GCCGGC 1 cut(s) 242
KroNI GCCGGC 1 cut(s) 244
Kzo9I GATC 3 cut(s) 129, 584, 616
LmnI GCTCC 4 cut(s) 4, 72, 446, 922
Lsp1109I GCAGC 4 cut(s) 374, 397, 682, 887
LweI GCATC 3 cut(s) 363, 670, 904
MaeI CTAG 3 cut(s) 579, 764, 830
MaeII ACGT 2 cut(s) 24, 234
MaeIII GTNAC 2 cut(s) 624, 698
MalI GATC 3 cut(s) 131, 586, 618
MbiI CCGCTC 1 cut(s) 532
MboI GATC 3 cut(s) 129, 584, 616
MboII GAAGA 3 cut(s) 603, 782, 809
MflI RGATCY 1 cut(s) 616
MhlI GDGCHC 3 cut(s) 77, 162, 791
MluCI AATT 6 cut(s) 62, 652, 802, 813, 859, 930
MlyI GAGTC 3 cut(s) 581, 632, 957
MmeI TCCRAC 2 cut(s) 60, 425
MreI CGCCGGCG 1 cut(s) 242
MroI TCCGGA 1 cut(s) 464
MroNI GCCGGC 1 cut(s) 242
MslI CAYNNNNRTG 1 cut(s) 165
MspI CCGG 4 cut(s) 199, 243, 465, 942
MspR9I CCNGG 2 cut(s) 104, 200
Mva1269I GAATGC 1 cut(s) 955
MvaI CCWGG 1 cut(s) 104
MvnI CGCG 2 cut(s) 165, 867
MwoI GCNNNNNNNGC 8 cut(s) 237, 252, 446, 611, 749, 923, 932, 980
NaeI GCCGGC 1 cut(s) 244
NciI CCSGG 1 cut(s) 200
NcoI CCATGG 2 cut(s) 366, 904
NdeII GATC 3 cut(s) 129, 584, 616
NgoMIV GCCGGC 1 cut(s) 242
NheI GCTAGC 1 cut(s) 763
NlaIII CATG 3 cut(s) 130, 370, 908
NlaIV GGNNCC 4 cut(s) 74, 161, 448, 460
NmuCI GTSAC 2 cut(s) 624, 698
NspV TTCGAA 1 cut(s) 60
PaeR7I CTCGAG 1 cut(s) 620
PctI GAATGC 1 cut(s) 955
PdiI GCCGGC 1 cut(s) 244
PfeI GAWTC 2 cut(s) 371, 808
PkrI GCNGC 6 cut(s) 145, 364, 412, 672, 840, 877
PleI GAGTC 3 cut(s) 580, 631, 957
PmaCI CACGTG 1 cut(s) 25
PmlI CACGTG 1 cut(s) 25
PpsI GAGTC 3 cut(s) 580, 631, 957
Ppu21I YACGTR 1 cut(s) 25
Psp6I CCWGG 1 cut(s) 102
PspCI CACGTG 1 cut(s) 25
PspGI CCWGG 1 cut(s) 102
PspN4I GGNNCC 4 cut(s) 74, 161, 448, 460
PspPI GGNCC 2 cut(s) 100, 189
PsuI RGATCY 1 cut(s) 616
RsaI GTAC 2 cut(s) 33, 110
RsaNI GTAC 2 cut(s) 32, 109
RseI CAYNNNNRTG 1 cut(s) 165
SatI GCNGC 6 cut(s) 144, 363, 411, 671, 839, 876
Sau3AI GATC 3 cut(s) 129, 584, 616
Sau96I GGNCC 2 cut(s) 100, 189
ScaI AGTACT 1 cut(s) 110
SchI GAGTC 3 cut(s) 581, 632, 957
ScrFI CCNGG 2 cut(s) 104, 200
SduI GDGCHC 3 cut(s) 77, 162, 791
SfaNI GCATC 3 cut(s) 363, 670, 904
SfcI CTRYAG 1 cut(s) 451
Sfr274I CTCGAG 1 cut(s) 620
SfuI TTCGAA 1 cut(s) 60
SgrAI CRCCGGYG 1 cut(s) 242
SlaI CTCGAG 1 cut(s) 620
SmiMI CAYNNNNRTG 1 cut(s) 165
SmlI CTYRAG 2 cut(s) 620, 745
SmoI CTYRAG 2 cut(s) 620, 745
Sse9I AATT 6 cut(s) 62, 652, 802, 813, 859, 930
SsiI CCGC 7 cut(s) 70, 144, 163, 530, 614, 839, 867
SspMI CTAG 3 cut(s) 579, 764, 830
StyD4I CCNGG 2 cut(s) 102, 198
StyI CCWWGG 3 cut(s) 366, 753, 904
TaaI ACNGT 3 cut(s) 455, 693, 1021
TaiI ACGT 2 cut(s) 27, 237
TaqI TCGA 6 cut(s) 60, 383, 492, 534, 563, 621
TaqII GACCGA 1 cut(s) 122
TasI AATT 6 cut(s) 62, 652, 802, 813, 859, 930
TatI WGTACW 1 cut(s) 108
TauI GCSGC 2 cut(s) 146, 841
TfiI GAWTC 2 cut(s) 371, 808
TscAI CASTG 2 cut(s) 304, 460
TseFI GTSAC 2 cut(s) 624, 698
TseI GCWGC 4 cut(s) 362, 410, 670, 875
Tsp45I GTSAC 2 cut(s) 624, 698
TspDTI ATGAA 3 cut(s) 183, 296, 740
TspGWI ACGGA 5 cut(s) 230, 498, 686, 692, 909
TspRI CASTG 2 cut(s) 304, 460
XagI CCTNNNNNAGG 1 cut(s) 664
XapI RAATTY 3 cut(s) 652, 813, 859
XhoI CTCGAG 1 cut(s) 620
XspI CTAG 3 cut(s) 579, 764, 830
ZraI GACGTC 1 cut(s) 235
ZrmI AGTACT 1 cut(s) 110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.