Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0003763

Physical Location & Seq

Genomic Coordinates Reverse (-)

18011293 .. 18018724

Gene Structure 7432 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1159200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2268 bp

ATGGAGGAAGAGAAGGGCGGCGGCGGCGGCGAATCCTCCAGGCCTTCGTCCAAGTTTGTGAAAGCCGGTGACCGGCAAATGTTCACGGTGGATCTCCGGCCCGGCGAGACCACCATAGTCTCGTGGAGGAAGCTCATGAAGGACACGAACAAGGTCAATGGTGGGCCCTCGACCTCGGCGCCGGAACCTCCTCCTGTCAACGCTCATCCTGCTCTCGAGTCTCGGATAGCTCCGGTCCAACAAACATCTGGAGATGAAGCAAAAGATGAAGGGAAAGATGAAGCTGCGCCAAATCGTTTTAGCGCTGTTATTGAGAAGATTGAACGCCTATATATGGGTAAAGATAGTAGTGATGATGAAGGTCCAAATGATGTTCCTGATGACGATCAGTATGATACCGAAGACTCCTTTATTGATGATGCTGAGTTGGATGAATATTTTGAAGTTGATAATTCAGCCATAAAACATGATGGATTCTTTGTAAACAGGGGAACGCTGGAGCGCATTAATGTACCTGCTGCATTACCTAACCAACAACCAAAAAAAAGGCGAAGAAAAGAGGCTAAAGGACCTGGGGAAAATGATGACATTCATGTGCCAAATAAACACACAAAAGTTGGCAAGACAGCACCAGCAAAGATTACACCAACACTTGTGAAGAATTCATCTACTCCTACTCAAACCATTACTGGAACCACTGAACACCGTGCAGATGTGAAATTTCAGAATCAGTTGCATGTTTCTGGACCTTCATCAACAAGGAAGTCTACTGAATCCAAAACAGTAATGGACCCTTCTTTTATGAAAGTGTCAGACGGAGATGCTCTTGTACTGCAAGCGGATGTGAAGGATATAGATAAGCAGAAGGCAGGAGTCCTGTTGTCCAAGGACTCAAGTAACAAATTTAAAGATGCTGGTGGATCATGTGATGGTTCATATCAGAGATACCATGACAAAAGTGCTTATGCACAAACCAAACACCAATCTGGGAGAGCATCAAGTAATGTTGATGAGCTGGAATCATCGGTTCGGGCCAGACATAAAAATGGGATTCGTGAGATTCCGGACCTTAATCTCTCAGATGGAAAGTACTCTCTTCCAACAACTAAACCTTCACATGTGCACAAAAAGGATGGCTCTAGTATAAAGTCAAAAAGTTCAATGCTTGAAAAGGCTATTAGGGAGCTAGAGAAGATGGTAGCTGAATCTAGGCCACCTGCTGCGGATAATCAAGAGGGAGATAATTCATCCCAAGCAATTAAAAGGAGATTACCTAGAGAACTAAAGATGAAACTTGCTAAAGTTGCTAGACTAGCGGCTAGCCATGGGAAAATAACAAAAGAGTTACTTAACCGGCTTATGAGTATTCTTGGTCACTTAATACAGCTCAGAACATTAAAGAGAAACTTAAAGGTCATGATTAGTATGGGTATTTCAGCAAAAAAGGAGAAAGATGAGAGGTTTCAACATGTAAAGAAGGAAGTTATAGATATGATTAAGATAAAGGCCCCATCCTTGGAATCCAAGGCATTGGAACAACATGCTGGAGCATCAGATGATTTTCAAGAAACTGCTTCTGGAACAAAAGAGCTTTCGAAAAGAAAATTTAGCATGGATGCTGCATTGGAGGACAAGATTTGTGACCTCTATGACCTTTATGTTGACGGGCTGGATGAAGATGCAGGTCCGCAAATAAGAAAGCTGTATGCCGAGTTAGCGGCATTGTGGCCTAATGGTTTCATGGACAATCATGGGATCAAACGCGCAATTTGTAGGTCAAAAGAGAGACGGAGGGAGCGATACAGCCGAAATAAAGAGAAAATTAGGAGGAAAAAGATGTTGACACCACGAACAGAAGAGACTATTCGAGTTGAGAGGTCAATTACCCAGCAACTATTAATGCAAGAGAGGATGGCAACTGAACAAAACAGTCAGAGCCCGACAAACAAGCCGATATCTGGTACAACAGCAGCCTTGGGGGTACCTGGTCCAATAAACGGTCCTAGCTTTGACAGACTTAAACAAGAGAAGCTCAAGGGAAGTTCAAGCAGTTCCGCAGACGACACACGGGTTGGAGACGGTGCATTGACGAAGAAGAAGACGAAGAGGAAGCCAGAACAAGAATTGGATGAAAGTCGTATCCGCCCGGAGAAATTACCTTCTCAGTCGGGGGAGGAAAGGCACAAGTCCTTAAAGCCGGCGGCCGGGCCGCCCCATAAATCGAACCTCCAGTCCACAGTTGTTCCAAGTGTGGAGCAGTCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006325 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0009628 GO:0009651 GO:0009987 GO:0010468 GO:0016043 GO:0019222 GO:0030874 GO:0030875 GO:0031974 GO:0031981 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044454 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HUN

Protein Analysis

756

Amino Acids

83.64

Weight (kDa)

9.25

Isoelectric Point (pI)

50.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HUN	PF08729	123 - 167	1.7e-12	HPC2 and ubinuclein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G77310 AT1G77310
fragaria_vesca	FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 FvH4_2g27830
malus_domestica	MD08G1159200.v1.1
prunus_persica	Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1
pyrus_communis	pycom348g00040
rosa_chinensis	RchiOBHm_Chr6g0293421 RchiOBHm_Chr6g0296701
rosa_laevigata	RLG00000011667 RLG00000011669
rosa_multiflora	Rmu_sc0001741.1_g000003 Rmu_sc0001741.1_g000007
rosa_roxburghii	Rroxscaffold_7G00171250
rosa_rugosa	Rorug06G0264500 Rorug06G0264600 Rorug06G0264700
rosa_samantha	Rh6AG376100 Rh6BG384400 Rh6CG362400 Rh6CG389500 Rh6CG389700 Rh6DG376900
rosa_wichuraiana	Rw6G032880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1225
Acc36I	ACCTGC	3 cut(s)	523, 1225, 1673
Acc65I	GGTACC	1 cut(s)	1981
AccB1I	GGYRCC	2 cut(s)	178, 1981
AccI	GTMKAC	1 cut(s)	767
AccII	CGCG	1 cut(s)	1764
AccIII	TCCGGA	1 cut(s)	1063
AclWI	GGATC	3 cut(s)	99, 928, 1763
AcoI	YGGCCR	1 cut(s)	2202
AcsI	RAATTY	4 cut(s)	661, 719, 902, 1604
AcyI	GRCGYC	1 cut(s)	179
AfaI	GTAC	5 cut(s)	513, 831, 1091, 1963, 1983
AfeI	AGCGCT	1 cut(s)	304
AfiI	CCNNNNNNNGG	6 cut(s)	72, 334, 1516, 1958, 1997, 2204
AflIII	ACRYGT	2 cut(s)	1117, 1468
AgsI	TTSAA	7 cut(s)	323, 443, 1161, 1169, 1466, 1565, 2046
AjnI	CCWGG	3 cut(s)	38, 571, 1984
AloI	GAACNNNNNNTCC	2 cut(s)	2216, 2248
Alw21I	GWGCWC	1 cut(s)	1125
Alw26I	GTCTC	6 cut(s)	101, 124, 225, 1780, 1853, 2070
Alw44I	GTGCAC	1 cut(s)	1121
AlwI	GGATC	3 cut(s)	99, 928, 1763
Ama87I	CYCGRG	1 cut(s)	215
Aor13HI	TCCGGA	1 cut(s)	1063
Aor51HI	AGCGCT	1 cut(s)	304
AoxI	GGCC	9 cut(s)	41, 98, 164, 1032, 1211, 1506, 1727, 2202, 2207
ApaI	GGGCCC	1 cut(s)	168
ApaLI	GTGCAC	1 cut(s)	1121
ApeKI	GCWGC	5 cut(s)	284, 518, 1220, 1619, 1970
ApoI	RAATTY	4 cut(s)	661, 719, 902, 1604
ArsI	GACNNNNNNTTYG	2 cut(s)	2216, 2248
AseI	ATTAAT	2 cut(s)	507, 1898
Asp718I	GGTACC	1 cut(s)	1981
AspLEI	GCGC	5 cut(s)	181, 289, 305, 504, 1766
AsuC2I	CCSGG	3 cut(s)	102, 2147, 2206
AsuHPI	GGTGA	1 cut(s)	80
AsuII	TTCGAA	1 cut(s)	1595
AsuNHI	GCTAGC	1 cut(s)	1319
AvaI	CYCGRG	1 cut(s)	215
AvaII	GGWCC	9 cut(s)	235, 362, 569, 746, 790, 1066, 1685, 1988, 2000
BaeGI	GKGCMC	2 cut(s)	168, 1125
BanI	GGYRCC	2 cut(s)	178, 1981
BanII	GRGCYC	2 cut(s)	168, 1940
BauI	CACGAG	1 cut(s)	121
BbsI	GAAGAC	2 cut(s)	408, 2105
Bbv12I	GWGCWC	1 cut(s)	1125
BbvI	GCAGC	5 cut(s)	271, 505, 1207, 1606, 1982
BccI	CCATC	7 cut(s)	464, 923, 1076, 1127, 1189, 1519, 1906
BciT130I	CCWGG	3 cut(s)	40, 573, 1986
BciVI	GTATCC	1 cut(s)	2150
BcnI	CCSGG	3 cut(s)	102, 2147, 2206
BcoDI	GTCTC	6 cut(s)	101, 124, 225, 1780, 1853, 2070
BfaI	CTAG	9 cut(s)	1140, 1187, 1209, 1275, 1308, 1313, 1320, 2004, 2262
BfoI	RGCGCY	2 cut(s)	182, 306
BfuAI	ACCTGC	3 cut(s)	523, 1225, 1673
BfuI	GTATCC	1 cut(s)	2150
BmcAI	AGTACT	1 cut(s)	1091
Bme1390I	CCNGG	6 cut(s)	40, 102, 573, 1986, 2147, 2206
Bme18I	GGWCC	9 cut(s)	235, 362, 569, 746, 790, 1066, 1685, 1988, 2000
BmeT110I	CYCGRG	1 cut(s)	215
BmiI	GGNNCC	7 cut(s)	166, 180, 186, 694, 792, 1509, 1983
BmrFI	CCNGG	6 cut(s)	40, 102, 573, 1986, 2147, 2206
BmsI	GCATC	7 cut(s)	409, 811, 901, 1004, 1559, 1606, 1669
BmtI	GCTAGC	1 cut(s)	1323
BpiI	GAAGAC	2 cut(s)	408, 2105
BpmI	CTGGAG	5 cut(s)	22, 270, 518, 1566, 2213
Bpu14I	TTCGAA	1 cut(s)	1595
BpuEI	CTTGAG	2 cut(s)	877, 2018
BpuMI	CCSGG	3 cut(s)	102, 2147, 2206
BsaBI	GATNNNNATC	1 cut(s)	384
BsaHI	GRCGYC	1 cut(s)	179
BsaI	GGTCTC	1 cut(s)	101
BsaJI	CCNNGG	7 cut(s)	174, 572, 885, 1324, 1515, 1524, 1974
BsaWI	WCCGGW	2 cut(s)	232, 1063
Bsc4I	CCNNNNNNNGG	6 cut(s)	72, 334, 1516, 1958, 1997, 2204
Bse118I	RCCGGY	4 cut(s)	65, 72, 1353, 2197
Bse1I	ACTGG	2 cut(s)	694, 2230
Bse8I	GATNNNNATC	1 cut(s)	384
BseAI	TCCGGA	1 cut(s)	1063
BseBI	CCWGG	3 cut(s)	40, 573, 1986
BseDI	CCNNGG	7 cut(s)	174, 572, 885, 1324, 1515, 1524, 1974
BseJI	GATNNNNATC	1 cut(s)	384
BseLI	CCNNNNNNNGG	6 cut(s)	72, 334, 1516, 1958, 1997, 2204
BseMII	CTCAG	4 cut(s)	414, 1092, 1402, 2177
BseNI	ACTGG	2 cut(s)	694, 2230
BseRI	GAGGAG	1 cut(s)	180
BseSI	GKGCMC	2 cut(s)	168, 1125
BseX3I	CGGCCG	1 cut(s)	2202
BseXI	GCAGC	5 cut(s)	271, 505, 1207, 1606, 1982
BseYI	CCCAGC	1 cut(s)	1887
BsgI	GTGCAG	1 cut(s)	729
Bsh1236I	CGCG	1 cut(s)	1764
Bsh1285I	CGRYCG	1 cut(s)	2205
BshFI	GGCC	9 cut(s)	43, 100, 166, 1034, 1213, 1508, 1729, 2204, 2209
BshNI	GGYRCC	2 cut(s)	178, 1981
BsiEI	CGRYCG	1 cut(s)	2205
BsiHKAI	GWGCWC	1 cut(s)	1125
BsiHKCI	CYCGRG	1 cut(s)	215
BslI	CCNNNNNNNGG	6 cut(s)	72, 334, 1516, 1958, 1997, 2204
BsmAI	GTCTC	6 cut(s)	101, 124, 225, 1780, 1853, 2070
BsmBI	CGTCTC	2 cut(s)	1780, 2070
BsnI	GGCC	9 cut(s)	43, 100, 166, 1034, 1213, 1508, 1729, 2204, 2209
Bso31I	GGTCTC	1 cut(s)	101
BsoBI	CYCGRG	1 cut(s)	215
Bsp119I	TTCGAA	1 cut(s)	1595
Bsp120I	GGGCCC	1 cut(s)	164
Bsp1286I	GDGCHC	3 cut(s)	168, 1125, 1940
Bsp13I	TCCGGA	1 cut(s)	1063
Bsp143I	GATC	4 cut(s)	91, 385, 920, 1755
Bsp19I	CCATGG	1 cut(s)	1324
BspANI	GGCC	9 cut(s)	43, 100, 166, 1034, 1213, 1508, 1729, 2204, 2209
BspCNI	CTCAG	4 cut(s)	415, 1091, 1401, 2176
BspEI	TCCGGA	1 cut(s)	1063
BspFNI	CGCG	1 cut(s)	1764
BspHI	TCATGA	2 cut(s)	135, 1416
BspLI	GGNNCC	7 cut(s)	166, 180, 186, 694, 792, 1509, 1983
BspMI	ACCTGC	3 cut(s)	523, 1225, 1673
BspOI	GCTAGC	1 cut(s)	1323
BspPI	GGATC	3 cut(s)	99, 928, 1763
BspT104I	TTCGAA	1 cut(s)	1595
BspT107I	GGYRCC	2 cut(s)	178, 1981
BspTNI	GGTCTC	1 cut(s)	101
BsrFI	RCCGGY	4 cut(s)	65, 72, 1353, 2197
BsrI	ACTGG	2 cut(s)	694, 2230
BssAI	RCCGGY	4 cut(s)	65, 72, 1353, 2197
BssECI	CCNNGG	7 cut(s)	174, 572, 885, 1324, 1515, 1524, 1974
BssMI	GATC	4 cut(s)	91, 385, 920, 1755
BssNI	GRCGYC	1 cut(s)	179
BssSI	CACGAG	1 cut(s)	121
BssT1I	CCWWGG	5 cut(s)	885, 1324, 1515, 1524, 1974
Bst2BI	CACGAG	1 cut(s)	121
Bst2UI	CCWGG	3 cut(s)	40, 573, 1986
Bst4CI	ACNGT	7 cut(s)	88, 707, 784, 1931, 2000, 2081, 2239
Bst6I	CTCTTC	4 cut(s)	3, 1101, 1851, 2099
BstACI	GRCGYC	1 cut(s)	179
BstBI	TTCGAA	1 cut(s)	1595
BstC8I	GCNNGC	3 cut(s)	837, 1321, 2199
BstDEI	CTNAG	4 cut(s)	423, 1078, 1388, 2163
BstDSI	CCRYGG	1 cut(s)	1324
BstEII	GGTNACC	1 cut(s)	68
BstFNI	CGCG	1 cut(s)	1764
BstH2I	RGCGCY	2 cut(s)	182, 306
BstHHI	GCGC	5 cut(s)	181, 289, 305, 504, 1766
BstKTI	GATC	4 cut(s)	94, 388, 923, 1758
BstMAI	GTCTC	6 cut(s)	101, 124, 225, 1780, 1853, 2070
BstMBI	GATC	4 cut(s)	91, 385, 920, 1755
BstMCI	CGRYCG	1 cut(s)	2205
BstMWI	GCNNNNNNNGC	6 cut(s)	24, 27, 209, 1304, 1313, 1715
BstNI	CCWGG	3 cut(s)	40, 573, 1986
BstNSI	RCATGY	4 cut(s)	740, 1121, 1472, 1544
BstPI	GGTNACC	1 cut(s)	68
BstSCI	CCNGG	6 cut(s)	38, 100, 571, 1984, 2145, 2204
BstSLI	GKGCMC	2 cut(s)	168, 1125
BstUI	CGCG	1 cut(s)	1764
BstV1I	GCAGC	5 cut(s)	271, 505, 1207, 1606, 1982
BstV2I	GAAGAC	2 cut(s)	408, 2105
BstX2I	RGATCY	1 cut(s)	91
BstXI	CCANNNNNNTGG	1 cut(s)	1531
BstYI	RGATCY	1 cut(s)	91
BstZI	CGGCCG	1 cut(s)	2202
BsuI	GTATCC	1 cut(s)	2150
BsuRI	GGCC	9 cut(s)	43, 100, 166, 1034, 1213, 1508, 1729, 2204, 2209
BtgI	CCRYGG	1 cut(s)	1324
BtsIMutI	CAGTG	1 cut(s)	696
BveI	ACCTGC	3 cut(s)	523, 1225, 1673
Cac8I	GCNNGC	3 cut(s)	837, 1321, 2199
CciI	TCATGA	2 cut(s)	135, 1416
CfoI	GCGC	5 cut(s)	181, 289, 305, 504, 1766
Cfr10I	RCCGGY	4 cut(s)	65, 72, 1353, 2197
CsiI	ACCWGGT	1 cut(s)	1984
Csp6I	GTAC	5 cut(s)	512, 830, 1090, 1962, 1982
CviQI	GTAC	5 cut(s)	512, 830, 1090, 1962, 1982
DdeI	CTNAG	4 cut(s)	423, 1078, 1388, 2163
DinI	GGCGCC	1 cut(s)	180
DpnI	GATC	4 cut(s)	93, 387, 922, 1757
DpnII	GATC	4 cut(s)	91, 385, 920, 1755
DraI	TTTAAA	1 cut(s)	907
EaeI	YGGCCR	1 cut(s)	2202
EagI	CGGCCG	1 cut(s)	2202
Eam1104I	CTCTTC	4 cut(s)	3, 1101, 1851, 2099
EarI	CTCTTC	4 cut(s)	3, 1101, 1851, 2099
EciI	GGCGGA	1 cut(s)	2132
EclXI	CGGCCG	1 cut(s)	2202
Eco130I	CCWWGG	5 cut(s)	885, 1324, 1515, 1524, 1974
Eco147I	AGGCCT	1 cut(s)	43
Eco24I	GRGCYC	2 cut(s)	168, 1940
Eco31I	GGTCTC	1 cut(s)	101
Eco32I	GATATC	1 cut(s)	1956
Eco47I	GGWCC	9 cut(s)	235, 362, 569, 746, 790, 1066, 1685, 1988, 2000
Eco47III	AGCGCT	1 cut(s)	304
Eco52I	CGGCCG	1 cut(s)	2202
Eco88I	CYCGRG	1 cut(s)	215
Eco91I	GGTNACC	1 cut(s)	68
EcoO109I	RGGNCCY	3 cut(s)	165, 569, 1507
EcoO65I	GGTNACC	1 cut(s)	68
EcoRI	GAATTC	1 cut(s)	661
EcoRII	CCWGG	3 cut(s)	38, 571, 1984
EcoRV	GATATC	1 cut(s)	1956
EcoT14I	CCWWGG	5 cut(s)	885, 1324, 1515, 1524, 1974
EcoT38I	GRGCYC	2 cut(s)	168, 1940
EgeI	GGCGCC	1 cut(s)	180
EheI	GGCGCC	1 cut(s)	180
ErhI	CCWWGG	5 cut(s)	885, 1324, 1515, 1524, 1974
Esp3I	CGTCTC	2 cut(s)	1780, 2070
FalI	AAGNNNNNCTT	4 cut(s)	1332, 1364, 1391, 1423
FblI	GTMKAC	1 cut(s)	767
FriOI	GRGCYC	2 cut(s)	168, 1940
FspBI	CTAG	9 cut(s)	1140, 1187, 1209, 1275, 1308, 1313, 1320, 2004, 2262
GlaI	GCGC	5 cut(s)	180, 288, 304, 503, 1765
GsaI	CCCAGC	1 cut(s)	1891
GsuI	CTGGAG	5 cut(s)	22, 270, 518, 1566, 2213
HaeII	RGCGCY	2 cut(s)	182, 306
HaeIII	GGCC	9 cut(s)	43, 100, 166, 1034, 1213, 1508, 1729, 2204, 2209
HhaI	GCGC	5 cut(s)	181, 289, 305, 504, 1766
Hin1I	GRCGYC	1 cut(s)	179
Hin6I	GCGC	5 cut(s)	179, 287, 303, 502, 1764
HinP1I	GCGC	5 cut(s)	179, 287, 303, 502, 1764
HincII	GTYRAC	3 cut(s)	199, 1663, 1842
HindII	GTYRAC	3 cut(s)	199, 1663, 1842
HphI	GGTGA	1 cut(s)	80
Hpy166II	GTNNAC	8 cut(s)	84, 199, 484, 768, 1123, 1663, 1842, 2235
Hpy188I	TCNGA	8 cut(s)	225, 726, 814, 942, 1081, 1391, 1555, 1935
Hpy8I	GTNNAC	8 cut(s)	84, 199, 484, 768, 1123, 1663, 1842, 2235
HpyCH4III	ACNGT	7 cut(s)	88, 707, 784, 1931, 2000, 2081, 2239
HpyF10VI	GCNNNNNNNGC	6 cut(s)	24, 27, 209, 1304, 1313, 1715
HpyF3I	CTNAG	4 cut(s)	423, 1078, 1388, 2163
Hsp92I	GRCGYC	1 cut(s)	179
HspAI	GCGC	5 cut(s)	179, 287, 303, 502, 1764
KasI	GGCGCC	1 cut(s)	178
Kpn2I	TCCGGA	1 cut(s)	1063
KpnI	GGTACC	1 cut(s)	1985
KroI	GCCGGC	1 cut(s)	2197
KroNI	GCCGGC	1 cut(s)	2199
Kzo9I	GATC	4 cut(s)	91, 385, 920, 1755
LmnI	GCTCC	6 cut(s)	235, 499, 1183, 1547, 1795, 2254
Lsp1109I	GCAGC	5 cut(s)	271, 505, 1207, 1606, 1982
LweI	GCATC	7 cut(s)	409, 811, 901, 1004, 1559, 1606, 1669
MabI	ACCWGGT	1 cut(s)	1984
MaeI	CTAG	9 cut(s)	1140, 1187, 1209, 1275, 1308, 1313, 1320, 2004, 2262
MaeIII	GTNAC	5 cut(s)	68, 896, 1344, 1373, 1640
MalI	GATC	4 cut(s)	93, 387, 922, 1757
MboI	GATC	4 cut(s)	91, 385, 920, 1755
MflI	RGATCY	1 cut(s)	91
MhlI	GDGCHC	3 cut(s)	168, 1125, 1940
Mly113I	GGCGCC	1 cut(s)	179
MlyI	GAGTC	4 cut(s)	227, 398, 882, 884
MmeI	TCCRAC	4 cut(s)	262, 408, 1124, 2053
MroI	TCCGGA	1 cut(s)	1063
MroNI	GCCGGC	1 cut(s)	2197
MslI	CAYNNNNRTG	2 cut(s)	593, 1044
MspR9I	CCNGG	6 cut(s)	40, 102, 573, 1986, 2147, 2206
MvaI	CCWGG	3 cut(s)	40, 573, 1986
MvnI	CGCG	1 cut(s)	1764
MwoI	GCNNNNNNNGC	6 cut(s)	24, 27, 209, 1304, 1313, 1715
NaeI	GCCGGC	1 cut(s)	2199
NarI	GGCGCC	1 cut(s)	179
NciI	CCSGG	3 cut(s)	102, 2147, 2206
NcoI	CCATGG	1 cut(s)	1324
NdeII	GATC	4 cut(s)	91, 385, 920, 1755
NgoMIV	GCCGGC	1 cut(s)	2197
NheI	GCTAGC	1 cut(s)	1319
NlaIV	GGNNCC	7 cut(s)	166, 180, 186, 694, 792, 1509, 1983
NmeAIII	GCCGAG	2 cut(s)	155, 1735
NmuCI	GTSAC	3 cut(s)	68, 1373, 1640
NspI	RCATGY	4 cut(s)	740, 1121, 1472, 1544
NspV	TTCGAA	1 cut(s)	1595
PaeR7I	CTCGAG	1 cut(s)	215
PagI	TCATGA	2 cut(s)	135, 1416
PaqCI	CACCTGC	1 cut(s)	1225
PceI	AGGCCT	1 cut(s)	43
PciI	ACATGT	2 cut(s)	1117, 1468
PcsI	WCGNNNNNNNCGW	1 cut(s)	1795
PdiI	GCCGGC	1 cut(s)	2199
PfeI	GAWTC	9 cut(s)	32, 474, 727, 773, 1019, 1051, 1060, 1205, 1520
PleI	GAGTC	4 cut(s)	226, 398, 881, 884
PluTI	GGCGCC	1 cut(s)	182
PpsI	GAGTC	4 cut(s)	226, 398, 881, 884
PpuMI	RGGWCCY	1 cut(s)	569
PscI	ACATGT	2 cut(s)	1117, 1468
PshBI	ATTAAT	2 cut(s)	507, 1898
Psp5II	RGGWCCY	1 cut(s)	569
Psp6I	CCWGG	3 cut(s)	38, 571, 1984
PspEI	GGTNACC	1 cut(s)	68
PspFI	CCCAGC	1 cut(s)	1887
PspGI	CCWGG	3 cut(s)	38, 571, 1984
PspN4I	GGNNCC	7 cut(s)	166, 180, 186, 694, 792, 1509, 1983
PspOMI	GGGCCC	1 cut(s)	164
PspPPI	RGGWCCY	1 cut(s)	569
PsuI	RGATCY	1 cut(s)	91
RsaI	GTAC	5 cut(s)	513, 831, 1091, 1963, 1983
RsaNI	GTAC	5 cut(s)	512, 830, 1090, 1962, 1982
RseI	CAYNNNNRTG	2 cut(s)	593, 1044
Sau3AI	GATC	4 cut(s)	91, 385, 920, 1755
ScaI	AGTACT	1 cut(s)	1091
SchI	GAGTC	4 cut(s)	227, 398, 882, 884
ScrFI	CCNGG	6 cut(s)	40, 102, 573, 1986, 2147, 2206
SduI	GDGCHC	3 cut(s)	168, 1125, 1940
SexAI	ACCWGGT	1 cut(s)	1984
SfaNI	GCATC	7 cut(s)	409, 811, 901, 1004, 1559, 1606, 1669
SfoI	GGCGCC	1 cut(s)	180
Sfr274I	CTCGAG	1 cut(s)	215
SfuI	TTCGAA	1 cut(s)	1595
SinI	GGWCC	9 cut(s)	235, 362, 569, 746, 790, 1066, 1685, 1988, 2000
SlaI	CTCGAG	1 cut(s)	215
SmiMI	CAYNNNNRTG	2 cut(s)	593, 1044
SmlI	CTYRAG	3 cut(s)	215, 892, 2033
SmoI	CTYRAG	3 cut(s)	215, 892, 2033
SseBI	AGGCCT	1 cut(s)	43
SspDI	GGCGCC	1 cut(s)	178
SspI	AATATT	1 cut(s)	437
SspMI	CTAG	9 cut(s)	1140, 1187, 1209, 1275, 1308, 1313, 1320, 2004, 2262
StuI	AGGCCT	1 cut(s)	43
StyD4I	CCNGG	6 cut(s)	38, 100, 571, 1984, 2145, 2204
StyI	CCWWGG	5 cut(s)	885, 1324, 1515, 1524, 1974
TaaI	ACNGT	7 cut(s)	88, 707, 784, 1931, 2000, 2081, 2239
TaqI	TCGA	5 cut(s)	170, 216, 1595, 1867, 2222
TatI	WGTACW	2 cut(s)	829, 1089
TauI	GCSGC	8 cut(s)	21, 24, 27, 30, 1319, 1721, 2204, 2212
TfiI	GAWTC	9 cut(s)	32, 474, 727, 773, 1019, 1051, 1060, 1205, 1520
TscAI	CASTG	1 cut(s)	703
TseFI	GTSAC	3 cut(s)	68, 1373, 1640
TseI	GCWGC	5 cut(s)	284, 518, 1220, 1619, 1970
Tsp45I	GTSAC	3 cut(s)	68, 1373, 1640
TspGWI	ACGGA	2 cut(s)	831, 1804
TspRI	CASTG	1 cut(s)	703
VneI	GTGCAC	1 cut(s)	1121
VpaK11BI	GGWCC	9 cut(s)	235, 362, 569, 746, 790, 1066, 1685, 1988, 2000
VspI	ATTAAT	2 cut(s)	507, 1898
XapI	RAATTY	4 cut(s)	661, 719, 902, 1604
XceI	RCATGY	4 cut(s)	740, 1121, 1472, 1544
XcmI	CCANNNNNNNNNTGG	2 cut(s)	245, 784
XhoI	CTCGAG	1 cut(s)	215
XmiI	GTMKAC	1 cut(s)	767
XspI	CTAG	9 cut(s)	1140, 1187, 1209, 1275, 1308, 1313, 1320, 2004, 2262
ZrmI	AGTACT	1 cut(s)	1091

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.