Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0003763

Physical Location & Seq

Genomic Coordinates Reverse (-)

57624580 .. 57630070

Gene Structure 5491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG389500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGACGACCAGAAGGCCGGCCCCGAATCCTCGAGGCCCTCCACCTCGTTTCTCAAAGCCGGCGACCGGCAAATGTTCACGGTGGAGCTCCGACCCGGCGAGACCACCATAGTCTCCTGGAAGAAGCTCGTCAGGGACACTAGCAAGGTCAATGGCCTGCCTCCGCCCACTGCCACTGCCACTGCCCCTGACCCTCCCCCCAACGCTCACCCTAGCCTCGAGTCTCGTATAGCTCCGGTACAACCTTCTGGAGAGGGAGAGGGAGAGGAAGGGAAAGATGAAGCTGCGCCGAATCGTTTTAGTGCTGTGATTGAGAAGATTGAGCGCCTATATATGGGTAAAGATAGTAGCGACGATGAAGATCAAAATATTCCTGATGATGATCAGTATGATACTGAGGACTCTTTTATCGATGATGCTGAGTTGGATGAATATTTTGAAGTTGATAATTCAGCCATAAAACATGACGGATTCTTTGTTAACAGGGGCCAACTAGAACGGATAAACACAACTGCTGCATTACCTAACCAGCAACCAAAGAAAAGGAGAAGAAAAGAGGCAAAAAGCCCCGGTGAAACTGATGACAGTCACGTGCCAAATAAACAAGCAAAGTTAGGTAAGACGGCCGCAGCAAAGATTACATCGGGACTTGCAAAGAACTCATCTGCTCTCACTACTATTGCTGTAACCACGGAACACCGTGAAGATGTGAAATTTCAGAATCCATTGAACTCTTCCGGTCATTCATCCACTAAAAAGTCTGCTGATTCTAAAACAGTTATGAATCCTTCTCCTTTGAAAGCATTGGATGGAGATGCTTCTGCACTGCAAGCAGAAGTGAAGGATATTGATAAGTCTAAGTCAGGAATCCTGCTTCCTAAGGACTCGAGTAATAGATTTAAAGATGCCGGTGGGTCCTCTGATGCATCGTATCATAAGTATCATGATAAAAATGCTTATTCGCAAACCAAAACCCAGTCGGGTAGACTATCTAGCAACGGTGATGAGCTGGAATCATCAGTTCGGGCGAAAGTGAAAAATGGGATCCATCAACTGCCTGACCTTAACCTCTCGGACGGGAAGTACTCTGTTCCAACTACAAAAACTTCACATTTGCATCGAAAGGAGGGTTCTAGTGTAAGGCCCAAGGGTTCGATGCTTGAAAAGGCTATTAGGGAGTTGGAGCGGATGGTTGCAGAATCAAGGCCACCTGCTATGGAGAACGCAGAGGGAGATAATTCATCCCAAGCAATTAAAAGGAGATTGCCTAGAGAAATAAAGATGAAGCTTGCTAAAGTTGCTAGACTGGCGCAGGCTAGCCATGGAAAAATATCAAAAGAGTTACTTAACCGGCTTATGAGTATTCTTGGCCACTTAATACAGCTCAGGACATTAAAGAGAAACTTAAAGGTTATGATTAGTATGGGTCTATCAGCCAAAAAGGAGAAAGATGACAGGTTTCAACAGATCAAGAAGGAAGTTATAGATATGGTTAAGATAAATGTATCCTCTTTGGAATCTAAGGCATTGGAACAAGCTGGAGCCTCCGATGATTTTCAAGAAATAGCCTCTGGAGCAAAAGAAGTCTCTAAAAGAAAGTTGAGCATGGATCCTGTATTAGAGGACAAGATTTGTGACCTCTATGACCTTTATGTTGATGGGCTGGATGAAGATATAGGTCCACAAATAAGAAAGCTCTATGCTGAGCTAGCGGGATTGTGGCCTAGTGGTTTCATGGACAATCATGGCATCAAAAGCGCAATTTGTCGGGCAAAAGATAGACGGAGGGAGCGATACAGCCAAAATAAAGATCAGGAGAAAATGAGGAGGAAAAAGATGTTGACTCCAAAATTAGAGGAGTCTGTTCGAGTTGACGCAAGTTCAATTCCCCAGCAACAGTATATACGAGAGAGAGTGGCAACTGAACCTAGCAGTCATGGTTCAGGGAACAAGACTGTATCAGGTACAACAGCAGCTGTGAGGATACCCAGTCCAATAAACGGTCCTAGCTTTGACAGGCTTAAACAAGAGAAGCTCAAGGGAAGTGCAAGTAATTCCCCTGATGACACGAGGGTCGCAGATGGTGCATTGGTAAAGAAAAAGGTGAAGAGGAAGCCAGATCAAGAGTTGGATGAAACTCGGATACGGCCAGAAAAATTACCTTCCCAACAAGGTGAGGAAAGACAAAAGTCATTCAAGCAGGCGGCTGGTGTACCCCATAAGTCAAACCATCAATCCACCGGCCTTCCTAGCGCTGAGCAGTCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006325 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0009628 GO:0009651 GO:0009987 GO:0010468 GO:0016043 GO:0019222 GO:0030874 GO:0030875 GO:0031974 GO:0031981 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044454 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HUN

Protein Analysis

756

Amino Acids

83.4

Weight (kDa)

9.13

Isoelectric Point (pI)

45.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HUN	PF08729	120 - 166	2.8e-12	HPC2 and ubinuclein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Orthologous Genes (Group: OG0003763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G77310 AT1G77310
fragaria_vesca	FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 FvH4_2g27830
malus_domestica	MD08G1159200.v1.1
prunus_persica	Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1
pyrus_communis	pycom348g00040
rosa_chinensis	RchiOBHm_Chr6g0293421 RchiOBHm_Chr6g0296701
rosa_laevigata	RLG00000011667 RLG00000011669
rosa_multiflora	Rmu_sc0001741.1_g000003 Rmu_sc0001741.1_g000007
rosa_roxburghii	Rroxscaffold_7G00171250
rosa_rugosa	Rorug06G0264500 Rorug06G0264600 Rorug06G0264700
rosa_samantha	Rh6AG376100 Rh6BG384400 Rh6CG362400 Rh6CG389500 Rh6CG389700 Rh6DG376900
rosa_wichuraiana	Rw6G032880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1219
AasI	GACNNNNNNGTC	1 cut(s)	2072
AbsI	CCTCGAGG	1 cut(s)	31
Acc36I	ACCTGC	1 cut(s)	1219
AccBSI	CCGCTC	1 cut(s)	1186
AccI	GTMKAC	1 cut(s)	985
AciI	CCGC	5 cut(s)	164, 627, 1186, 1712, 2204
AclWI	GGATC	4 cut(s)	1039, 1052, 1604, 1617
AcoI	YGGCCR	3 cut(s)	624, 1369, 2147
AcsI	RAATTY	1 cut(s)	713
AcvI	CACGTG	1 cut(s)	592
AfaI	GTAC	4 cut(s)	240, 1085, 1966, 2214
AfeI	AGCGCT	1 cut(s)	2254
AfiI	CCNNNNNNNGG	3 cut(s)	66, 334, 2000
AgsI	TTSAA	8 cut(s)	440, 730, 799, 1163, 1463, 1559, 1884, 2197
AjnI	CCWGG	1 cut(s)	116
Alw21I	GWGCWC	1 cut(s)	90
Alw26I	GTCTC	4 cut(s)	95, 118, 228, 1591
AlwI	GGATC	4 cut(s)	1039, 1052, 1604, 1617
AlwNI	CAGNNNCTG	1 cut(s)	1976
Ama87I	CYCGRG	3 cut(s)	31, 218, 886
Aor51HI	AGCGCT	1 cut(s)	2254
ApeKI	GCWGC	4 cut(s)	284, 515, 629, 1973
ApoI	RAATTY	1 cut(s)	713
ArsI	GACNNNNNNTTYG	2 cut(s)	458, 490
AspLEI	GCGC	5 cut(s)	289, 327, 1312, 1760, 2255
AspS9I	GGNCC	7 cut(s)	20, 36, 487, 915, 1143, 1679, 2003
AsuC2I	CCSGG	2 cut(s)	96, 570
AsuHPI	GGTGA	5 cut(s)	200, 584, 1013, 2116, 2186
AsuNHI	GCTAGC	2 cut(s)	1316, 1708
AvaI	CYCGRG	3 cut(s)	31, 218, 886
AvaII	GGWCC	3 cut(s)	915, 1679, 2003
AxyI	CCTNAGG	1 cut(s)	879
BalI	TGGCCA	1 cut(s)	1371
BamHI	GGATCC	2 cut(s)	1044, 1609
BanII	GRGCYC	1 cut(s)	90
BauI	CACGAG	1 cut(s)	2068
BbrPI	CACGTG	1 cut(s)	592
Bbv12I	GWGCWC	1 cut(s)	90
BbvI	GCAGC	4 cut(s)	271, 502, 641, 1985
BccI	CCATC	6 cut(s)	803, 1056, 1183, 1652, 2075, 2238
BceAI	ACGGC	2 cut(s)	639, 2162
BciT130I	CCWGG	1 cut(s)	118
BciVI	GTATCC	3 cut(s)	1516, 1977, 2136
BclI	TGATCA	1 cut(s)	382
BcnI	CCSGG	2 cut(s)	96, 570
BcoDI	GTCTC	4 cut(s)	95, 118, 228, 1591
BfoI	RGCGCY	2 cut(s)	328, 2256
BfuAI	ACCTGC	1 cut(s)	1219
BfuI	GTATCC	3 cut(s)	1516, 1977, 2136
BisI	GCNGC	6 cut(s)	285, 516, 627, 630, 1974, 2205
BlpI	GCTNAGC	2 cut(s)	1704, 2256
BlsI	GCNGC	6 cut(s)	286, 517, 628, 631, 1975, 2206
BmcAI	AGTACT	1 cut(s)	1085
Bme1390I	CCNGG	3 cut(s)	96, 118, 570
Bme18I	GGWCC	3 cut(s)	915, 1679, 2003
BmeT110I	CYCGRG	3 cut(s)	31, 218, 886
BmgT120I	GGNCC	7 cut(s)	20, 36, 487, 915, 1143, 1679, 2003
BmiI	GGNNCC	6 cut(s)	22, 488, 916, 1046, 1543, 1611
BmrFI	CCNGG	3 cut(s)	96, 118, 570
BmrI	ACTGGG	2 cut(s)	970, 1983
BmsI	GCATC	8 cut(s)	406, 805, 895, 913, 935, 1126, 1146, 1758
BmtI	GCTAGC	2 cut(s)	1320, 1712
BmuI	ACTGGG	2 cut(s)	970, 1983
BoxI	GACNNNNGTC	1 cut(s)	2188
BpmI	CTGGAG	3 cut(s)	270, 1560, 1593
Bpu10I	CCTNAGC	1 cut(s)	1385
Bpu1102I	GCTNAGC	2 cut(s)	1704, 2256
BpuEI	CTTGAG	1 cut(s)	2021
BpuMI	CCSGG	2 cut(s)	96, 570
Bsa29I	ATCGAT	1 cut(s)	411
BsaAI	YACGTR	1 cut(s)	592
BsaBI	GATNNNNATC	2 cut(s)	360, 381
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	4 cut(s)	568, 690, 1146, 1321
BsaWI	WCCGGW	2 cut(s)	235, 737
Bsc4I	CCNNNNNNNGG	3 cut(s)	66, 334, 2000
Bse118I	RCCGGY	6 cut(s)	17, 59, 66, 908, 1350, 2240
Bse1I	ACTGG	3 cut(s)	976, 1311, 1989
Bse21I	CCTNAGG	1 cut(s)	879
Bse8I	GATNNNNATC	2 cut(s)	360, 381
BseBI	CCWGG	1 cut(s)	118
BseCI	ATCGAT	1 cut(s)	411
BseDI	CCNNGG	4 cut(s)	568, 690, 1146, 1321
BseGI	GGATG	7 cut(s)	433, 746, 814, 1194, 1241, 1672, 2137
BseJI	GATNNNNATC	2 cut(s)	360, 381
BseLI	CCNNNNNNNGG	3 cut(s)	66, 334, 2000
BseMII	CTCAG	5 cut(s)	387, 411, 1399, 1695, 2247
BseNI	ACTGG	3 cut(s)	976, 1311, 1989
BseRI	GAGGAG	2 cut(s)	1840, 1871
BseX3I	CGGCCG	1 cut(s)	624
BseXI	GCAGC	4 cut(s)	271, 502, 641, 1985
BseYI	CCCAGC	1 cut(s)	1890
BsgI	GTGCAG	1 cut(s)	807
Bsh1285I	CGRYCG	2 cut(s)	67, 627
BshVI	ATCGAT	1 cut(s)	411
BsiEI	CGRYCG	2 cut(s)	67, 627
BsiHKAI	GWGCWC	1 cut(s)	90
BsiHKCI	CYCGRG	3 cut(s)	31, 218, 886
BslFI	GGGAC	2 cut(s)	149, 660
BslI	CCNNNNNNNGG	3 cut(s)	66, 334, 2000
BsmAI	GTCTC	4 cut(s)	95, 118, 228, 1591
BsmFI	GGGAC	2 cut(s)	149, 660
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	3 cut(s)	31, 218, 886
Bsp1286I	GDGCHC	1 cut(s)	90
Bsp143I	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
Bsp1720I	GCTNAGC	2 cut(s)	1704, 2256
Bsp19I	CCATGG	1 cut(s)	1321
BspACI	CCGC	5 cut(s)	164, 627, 1186, 1712, 2204
BspCNI	CTCAG	5 cut(s)	388, 412, 1398, 1696, 2248
BspDI	ATCGAT	1 cut(s)	411
BspHI	TCATGA	1 cut(s)	943
BspLI	GGNNCC	6 cut(s)	22, 488, 916, 1046, 1543, 1611
BspMI	ACCTGC	1 cut(s)	1219
BspOI	GCTAGC	2 cut(s)	1320, 1712
BspPI	GGATC	4 cut(s)	1039, 1052, 1604, 1617
BspTNI	GGTCTC	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	1186
BsrFI	RCCGGY	6 cut(s)	17, 59, 66, 908, 1350, 2240
BsrI	ACTGG	3 cut(s)	976, 1311, 1989
BssAI	RCCGGY	6 cut(s)	17, 59, 66, 908, 1350, 2240
BssECI	CCNNGG	4 cut(s)	568, 690, 1146, 1321
BssMI	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
BssSI	CACGAG	1 cut(s)	2068
BssT1I	CCWWGG	2 cut(s)	1146, 1321
Bst2BI	CACGAG	1 cut(s)	2068
Bst2UI	CCWGG	1 cut(s)	118
Bst4CI	ACNGT	8 cut(s)	82, 587, 701, 778, 1001, 1899, 1957, 2003
Bst6I	CTCTTC	2 cut(s)	739, 2102
BstAPI	GCANNNNNTGC	1 cut(s)	2084
BstBAI	YACGTR	1 cut(s)	592
BstC8I	GCNNGC	9 cut(s)	19, 61, 158, 831, 1290, 1314, 1318, 1710, 2202
BstDEI	CTNAG	8 cut(s)	396, 420, 858, 879, 1385, 1521, 1704, 2256
BstDSI	CCRYGG	2 cut(s)	690, 1321
BstF5I	GGATG	7 cut(s)	433, 746, 814, 1194, 1241, 1672, 2137
BstH2I	RGCGCY	2 cut(s)	328, 2256
BstHHI	GCGC	5 cut(s)	289, 327, 1312, 1760, 2255
BstKTI	GATC	7 cut(s)	364, 385, 1047, 1470, 1612, 1813, 2122
BstMAI	GTCTC	4 cut(s)	95, 118, 228, 1591
BstMBI	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
BstMCI	CGRYCG	2 cut(s)	67, 627
BstMWI	GCNNNNNNNGC	8 cut(s)	830, 1298, 1307, 1574, 1709, 1755, 2084, 2250
BstNI	CCWGG	1 cut(s)	118
BstPAI	GACNNNNGTC	1 cut(s)	2188
BstSCI	CCNGG	3 cut(s)	94, 116, 568
BstV1I	GCAGC	4 cut(s)	271, 502, 641, 1985
BstX2I	RGATCY	2 cut(s)	1044, 1609
BstYI	RGATCY	2 cut(s)	1044, 1609
BstZI	CGGCCG	1 cut(s)	624
Bsu15I	ATCGAT	1 cut(s)	411
Bsu36I	CCTNAGG	1 cut(s)	879
BsuI	GTATCC	3 cut(s)	1516, 1977, 2136
BsuTUI	ATCGAT	1 cut(s)	411
BtgI	CCRYGG	2 cut(s)	690, 1321
BtsCI	GGATG	7 cut(s)	433, 746, 814, 1194, 1241, 1672, 2137
BtsI	GCAGTG	4 cut(s)	168, 174, 180, 824
BtsIMutI	CAGTG	4 cut(s)	168, 174, 180, 824
BveI	ACCTGC	1 cut(s)	1219
Cac8I	GCNNGC	9 cut(s)	19, 61, 158, 831, 1290, 1314, 1318, 1710, 2202
CaiI	CAGNNNCTG	1 cut(s)	1976
CciI	TCATGA	1 cut(s)	943
CfoI	GCGC	5 cut(s)	289, 327, 1312, 1760, 2255
Cfr10I	RCCGGY	6 cut(s)	17, 59, 66, 908, 1350, 2240
Cfr13I	GGNCC	7 cut(s)	20, 36, 487, 915, 1143, 1679, 2003
ClaI	ATCGAT	1 cut(s)	411
CseI	GACGC	1 cut(s)	1883
Csp6I	GTAC	4 cut(s)	239, 1084, 1965, 2213
CviAII	CATG	7 cut(s)	464, 944, 1322, 1606, 1735, 1745, 1937
CviQI	GTAC	4 cut(s)	239, 1084, 1965, 2213
DdeI	CTNAG	8 cut(s)	396, 420, 858, 879, 1385, 1521, 1704, 2256
DpnI	GATC	7 cut(s)	363, 384, 1046, 1469, 1611, 1812, 2121
DpnII	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
DraI	TTTAAA	1 cut(s)	901
DrdI	GACNNNNNNGTC	1 cut(s)	2072
DseDI	GACNNNNNNGTC	1 cut(s)	2072
EaeI	YGGCCR	3 cut(s)	624, 1369, 2147
EagI	CGGCCG	1 cut(s)	624
Eam1104I	CTCTTC	2 cut(s)	739, 2102
EarI	CTCTTC	2 cut(s)	739, 2102
EciI	GGCGGA	1 cut(s)	153
Ecl136II	GAGCTC	1 cut(s)	88
EclXI	CGGCCG	1 cut(s)	624
Eco130I	CCWWGG	2 cut(s)	1146, 1321
Eco24I	GRGCYC	1 cut(s)	90
Eco31I	GGTCTC	1 cut(s)	95
Eco47I	GGWCC	3 cut(s)	915, 1679, 2003
Eco47III	AGCGCT	1 cut(s)	2254
Eco52I	CGGCCG	1 cut(s)	624
Eco53kI	GAGCTC	1 cut(s)	88
Eco72I	CACGTG	1 cut(s)	592
Eco81I	CCTNAGG	1 cut(s)	879
Eco88I	CYCGRG	3 cut(s)	31, 218, 886
EcoICRI	GAGCTC	1 cut(s)	88
EcoO109I	RGGNCCY	2 cut(s)	36, 915
EcoRII	CCWGG	1 cut(s)	116
EcoT14I	CCWWGG	2 cut(s)	1146, 1321
EcoT22I	ATGCAT	1 cut(s)	928
EcoT38I	GRGCYC	1 cut(s)	90
ErhI	CCWWGG	2 cut(s)	1146, 1321
FaeI	CATG	7 cut(s)	467, 947, 1325, 1609, 1738, 1748, 1940
FalI	AAGNNNNNCTT	4 cut(s)	1329, 1361, 1388, 1420
FaqI	GGGAC	2 cut(s)	149, 660
FatI	CATG	7 cut(s)	463, 943, 1321, 1605, 1734, 1744, 1936
FauI	CCCGC	1 cut(s)	1705
FbaI	TGATCA	1 cut(s)	382
FblI	GTMKAC	1 cut(s)	985
Fnu4HI	GCNGC	6 cut(s)	285, 516, 627, 630, 1974, 2205
FokI	GGATG	7 cut(s)	440, 733, 821, 1201, 1228, 1679, 2144
FriOI	GRGCYC	1 cut(s)	90
FseI	GGCCGGCC	1 cut(s)	21
Fsp4HI	GCNGC	6 cut(s)	285, 516, 627, 630, 1974, 2205
GlaI	GCGC	5 cut(s)	288, 326, 1311, 1759, 2254
GluI	GCNGC	6 cut(s)	285, 516, 627, 630, 1974, 2205
GsaI	CCCAGC	1 cut(s)	1894
GsuI	CTGGAG	3 cut(s)	270, 1560, 1593
HaeII	RGCGCY	2 cut(s)	328, 2256
HgaI	GACGC	1 cut(s)	1883
HhaI	GCGC	5 cut(s)	289, 327, 1312, 1760, 2255
Hin1II	CATG	7 cut(s)	467, 947, 1325, 1609, 1738, 1748, 1940
Hin6I	GCGC	5 cut(s)	287, 325, 1310, 1758, 2253
HinP1I	GCGC	5 cut(s)	287, 325, 1310, 1758, 2253
HincII	GTYRAC	3 cut(s)	481, 1842, 1873
HindII	GTYRAC	3 cut(s)	481, 1842, 1873
HindIII	AAGCTT	1 cut(s)	1286
HpaI	GTTAAC	1 cut(s)	481
HphI	GGTGA	5 cut(s)	200, 584, 1013, 2116, 2186
Hpy166II	GTNNAC	7 cut(s)	78, 481, 986, 1682, 1842, 1873, 2213
Hpy188I	TCNGA	6 cut(s)	92, 720, 922, 1075, 1549, 2142
Hpy8I	GTNNAC	7 cut(s)	78, 481, 986, 1682, 1842, 1873, 2213
Hpy99I	CGWCG	1 cut(s)	356
HpyAV	CCTTC	8 cut(s)	7, 255, 263, 798, 835, 1468, 2172, 2255
HpyCH4III	ACNGT	8 cut(s)	82, 587, 701, 778, 1001, 1899, 1957, 2003
HpyCH4IV	ACGT	1 cut(s)	591
HpyCH4V	TGCA	9 cut(s)	518, 653, 824, 829, 926, 1117, 1196, 2048, 2087
HpyF10VI	GCNNNNNNNGC	8 cut(s)	830, 1298, 1307, 1574, 1709, 1755, 2084, 2250
HpyF3I	CTNAG	8 cut(s)	396, 420, 858, 879, 1385, 1521, 1704, 2256
HpySE526I	ACGT	1 cut(s)	591
Hsp92II	CATG	7 cut(s)	467, 947, 1325, 1609, 1738, 1748, 1940
HspAI	GCGC	5 cut(s)	287, 325, 1310, 1758, 2253
KroI	GCCGGC	2 cut(s)	17, 59
KroNI	GCCGGC	2 cut(s)	19, 61
Ksp22I	TGATCA	1 cut(s)	382
KspAI	GTTAAC	1 cut(s)	481
Kzo9I	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
LmnI	GCTCC	7 cut(s)	85, 93, 238, 1183, 1541, 1574, 1789
Lsp1109I	GCAGC	4 cut(s)	271, 502, 641, 1985
LweI	GCATC	8 cut(s)	406, 805, 895, 913, 935, 1126, 1146, 1758
MaeII	ACGT	1 cut(s)	591
MaeIII	GTNAC	4 cut(s)	587, 685, 1341, 1634
MalI	GATC	7 cut(s)	363, 384, 1046, 1469, 1611, 1812, 2121
MbiI	CCGCTC	1 cut(s)	1186
MboI	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
MboII	GAAGA	8 cut(s)	133, 328, 371, 561, 716, 726, 1682, 2119
MflI	RGATCY	2 cut(s)	1044, 1609
MhlI	GDGCHC	1 cut(s)	90
MlsI	TGGCCA	1 cut(s)	1371
MluCI	AATT	9 cut(s)	448, 713, 1237, 1251, 1761, 1850, 1884, 2053, 2156
MluNI	TGGCCA	1 cut(s)	1371
MlyI	GAGTC	5 cut(s)	230, 395, 878, 1837, 1868
MmeI	TCCRAC	5 cut(s)	115, 405, 1118, 1161, 2109
Mox20I	TGGCCA	1 cut(s)	1371
Mph1103I	ATGCAT	1 cut(s)	928
MroNI	GCCGGC	2 cut(s)	17, 59
MscI	TGGCCA	1 cut(s)	1371
Msp20I	TGGCCA	1 cut(s)	1371
MspA1I	CMGCKG	1 cut(s)	1976
MspR9I	CCNGG	3 cut(s)	96, 118, 570
MvaI	CCWGG	1 cut(s)	118
MwoI	GCNNNNNNNGC	8 cut(s)	830, 1298, 1307, 1574, 1709, 1755, 2084, 2250
NaeI	GCCGGC	2 cut(s)	19, 61
NciI	CCSGG	2 cut(s)	96, 570
NcoI	CCATGG	1 cut(s)	1321
NdeII	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
NgoMIV	GCCGGC	2 cut(s)	17, 59
NheI	GCTAGC	2 cut(s)	1316, 1708
NlaIII	CATG	7 cut(s)	467, 947, 1325, 1609, 1738, 1748, 1940
NlaIV	GGNNCC	6 cut(s)	22, 488, 916, 1046, 1543, 1611
NmuCI	GTSAC	2 cut(s)	587, 1634
NsiI	ATGCAT	1 cut(s)	928
PaeR7I	CTCGAG	3 cut(s)	31, 218, 886
PagI	TCATGA	1 cut(s)	943
PaqCI	CACCTGC	1 cut(s)	1219
PcsI	WCGNNNNNNNCGW	1 cut(s)	1789
PdiI	GCCGGC	2 cut(s)	19, 61
PfoI	TCCNGGA	1 cut(s)	116
PkrI	GCNGC	6 cut(s)	286, 517, 628, 631, 1975, 2206
PleI	GAGTC	5 cut(s)	229, 395, 878, 1837, 1867
PmaCI	CACGTG	1 cut(s)	592
PmlI	CACGTG	1 cut(s)	592
PpsI	GAGTC	5 cut(s)	229, 395, 878, 1837, 1867
Ppu21I	YACGTR	1 cut(s)	592
PpuMI	RGGWCCY	1 cut(s)	915
PshAI	GACNNNNGTC	1 cut(s)	2188
Psp124BI	GAGCTC	1 cut(s)	90
Psp5II	RGGWCCY	1 cut(s)	915
Psp6I	CCWGG	1 cut(s)	116
PspCI	CACGTG	1 cut(s)	592
PspFI	CCCAGC	1 cut(s)	1890
PspGI	CCWGG	1 cut(s)	116
PspN4I	GGNNCC	6 cut(s)	22, 488, 916, 1046, 1543, 1611
PspPI	GGNCC	7 cut(s)	20, 36, 487, 915, 1143, 1679, 2003
PspPPI	RGGWCCY	1 cut(s)	915
PspXI	VCTCGAGB	3 cut(s)	31, 218, 886
PstNI	CAGNNNCTG	1 cut(s)	1976
PsuI	RGATCY	2 cut(s)	1044, 1609
PvuII	CAGCTG	1 cut(s)	1976
RigI	GGCCGGCC	1 cut(s)	21
RsaI	GTAC	4 cut(s)	240, 1085, 1966, 2214
RsaNI	GTAC	4 cut(s)	239, 1084, 1965, 2213
SacI	GAGCTC	1 cut(s)	90
SatI	GCNGC	6 cut(s)	285, 516, 627, 630, 1974, 2205
Sau3AI	GATC	7 cut(s)	361, 382, 1044, 1467, 1609, 1810, 2119
Sau96I	GGNCC	7 cut(s)	20, 36, 487, 915, 1143, 1679, 2003
ScaI	AGTACT	1 cut(s)	1085
SchI	GAGTC	5 cut(s)	230, 395, 878, 1837, 1868
ScrFI	CCNGG	3 cut(s)	96, 118, 570
SduI	GDGCHC	1 cut(s)	90
SfaNI	GCATC	8 cut(s)	406, 805, 895, 913, 935, 1126, 1146, 1758
Sfr274I	CTCGAG	3 cut(s)	31, 218, 886
SinI	GGWCC	3 cut(s)	915, 1679, 2003
SlaI	CTCGAG	3 cut(s)	31, 218, 886
SmlI	CTYRAG	4 cut(s)	31, 218, 886, 2036
SmoI	CTYRAG	4 cut(s)	31, 218, 886, 2036
Sse9I	AATT	9 cut(s)	448, 713, 1237, 1251, 1761, 1850, 1884, 2053, 2156
SsiI	CCGC	5 cut(s)	164, 627, 1186, 1712, 2204
SspI	AATATT	2 cut(s)	370, 434
SstI	GAGCTC	1 cut(s)	90
StyD4I	CCNGG	3 cut(s)	94, 116, 568
StyI	CCWWGG	2 cut(s)	1146, 1321
TaaI	ACNGT	8 cut(s)	82, 587, 701, 778, 1001, 1899, 1957, 2003
TaiI	ACGT	1 cut(s)	594
TaqI	TCGA	7 cut(s)	32, 219, 411, 887, 1120, 1154, 1867
TasI	AATT	9 cut(s)	448, 713, 1237, 1251, 1761, 1850, 1884, 2053, 2156
TatI	WGTACW	1 cut(s)	1083
TauI	GCSGC	2 cut(s)	629, 2207
TscAI	CASTG	4 cut(s)	175, 181, 187, 831
TseFI	GTSAC	2 cut(s)	587, 1634
TseI	GCWGC	4 cut(s)	284, 515, 629, 1973
Tsp45I	GTSAC	2 cut(s)	587, 1634
TspGWI	ACGGA	4 cut(s)	483, 514, 707, 1798
TspRI	CASTG	4 cut(s)	175, 181, 187, 831
VpaK11BI	GGWCC	3 cut(s)	915, 1679, 2003
XapI	RAATTY	1 cut(s)	713
XhoI	CTCGAG	3 cut(s)	31, 218, 886
XmiI	GTMKAC	1 cut(s)	985
ZrmI	AGTACT	1 cut(s)	1085
Zsp2I	ATGCAT	1 cut(s)	928

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.