DNA topoisomerase 2-binding protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77320 AT1G77320 AT1G77320 |
| fragaria_vesca | FvH4_2g27821 FvH4_2g27821 FvH4_2g27821 FvH4_2g27821 FvH4_2g27821 |
| malus_domestica | MD08G1159000.v1.1 MD08G1159100.v1.1 |
| prunus_persica | Prupe.1G489800_v2.0.a1 |
| pyrus_communis | pycom348g00050 pycom348g00060 |
| rosa_chinensis | RchiOBHm_Chr6g0296681 RchiOBHm_Chr6g0296691 RchiOBHm_Chr7g0211681 |
| rosa_laevigata | RLG00000011670 RLG00000019186 RLG00000030023 |
| rosa_multiflora | Rmu_co8128350.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092010 Rroxscaffold_5G00341250 Rroxscaffold_7G00171260 |
| rosa_rugosa | Rorug06G0264200 Rorug06G0264300 Rorug06G0264400.1 Rorug06G0264500 |
| rosa_samantha | Rh4CG165900 Rh6AG376000 Rh6BG384300 Rh6CG389400 Rh6DG376800 Rh7CG482500 Rh7DG451300 |
| rosa_wichuraiana | Rw6G032870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 37 |
| AciI | CCGC | 3 cut(s) | 26, 37, 106 |
| AclWI | GGATC | 1 cut(s) | 216 |
| AcvI | CACGTG | 2 cut(s) | 22, 32 |
| AfaI | GTAC | 2 cut(s) | 170, 203 |
| AjnI | CCWGG | 1 cut(s) | 171 |
| AluBI | AGCT | 3 cut(s) | 85, 166, 178 |
| AluI | AGCT | 3 cut(s) | 85, 166, 178 |
| AlwI | GGATC | 1 cut(s) | 216 |
| ApeKI | GCWGC | 1 cut(s) | 82 |
| AspLEI | GCGC | 1 cut(s) | 105 |
| AsuC2I | CCSGG | 1 cut(s) | 89 |
| BauI | CACGAG | 1 cut(s) | 5 |
| BbrPI | CACGTG | 2 cut(s) | 22, 32 |
| BbvI | GCAGC | 1 cut(s) | 94 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 97, 131 |
| BciT130I | CCWGG | 1 cut(s) | 173 |
| BcnI | CCSGG | 1 cut(s) | 89 |
| BisI | GCNGC | 3 cut(s) | 26, 83, 106 |
| BlsI | GCNGC | 3 cut(s) | 27, 84, 107 |
| Bme1390I | CCNGG | 2 cut(s) | 89, 173 |
| BmrFI | CCNGG | 2 cut(s) | 89, 173 |
| BmrI | ACTGGG | 1 cut(s) | 214 |
| BmuI | ACTGGG | 1 cut(s) | 214 |
| BpuMI | CCSGG | 1 cut(s) | 89 |
| BsaAI | YACGTR | 2 cut(s) | 22, 32 |
| BsaJI | CCNNGG | 1 cut(s) | 143 |
| Bse1I | ACTGG | 1 cut(s) | 209 |
| BseBI | CCWGG | 1 cut(s) | 173 |
| BseDI | CCNNGG | 1 cut(s) | 143 |
| BseGI | GGATG | 1 cut(s) | 60 |
| BseNI | ACTGG | 1 cut(s) | 209 |
| BseXI | GCAGC | 1 cut(s) | 94 |
| BsiSI | CCGG | 1 cut(s) | 88 |
| Bsp143I | GATC | 2 cut(s) | 9, 208 |
| BspACI | CCGC | 3 cut(s) | 26, 37, 106 |
| BspPI | GGATC | 1 cut(s) | 216 |
| BsrBI | CCGCTC | 1 cut(s) | 37 |
| BsrI | ACTGG | 1 cut(s) | 209 |
| BssECI | CCNNGG | 1 cut(s) | 143 |
| BssMI | GATC | 2 cut(s) | 9, 208 |
| BssSI | CACGAG | 1 cut(s) | 5 |
| BssT1I | CCWWGG | 1 cut(s) | 143 |
| Bst2BI | CACGAG | 1 cut(s) | 5 |
| Bst2UI | CCWGG | 1 cut(s) | 173 |
| BstBAI | YACGTR | 2 cut(s) | 22, 32 |
| BstDEI | CTNAG | 1 cut(s) | 179 |
| BstF5I | GGATG | 1 cut(s) | 60 |
| BstHHI | GCGC | 1 cut(s) | 105 |
| BstKTI | GATC | 2 cut(s) | 12, 211 |
| BstMBI | GATC | 2 cut(s) | 9, 208 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 34, 79, 111 |
| BstNI | CCWGG | 1 cut(s) | 173 |
| BstSCI | CCNGG | 2 cut(s) | 87, 171 |
| BstV1I | GCAGC | 1 cut(s) | 94 |
| BtsCI | GGATG | 1 cut(s) | 60 |
| CfoI | GCGC | 1 cut(s) | 105 |
| CseI | GACGC | 1 cut(s) | 62 |
| Csp6I | GTAC | 2 cut(s) | 169, 202 |
| CviAII | CATG | 3 cut(s) | 100, 137, 212 |
| CviJI | RGCY | 5 cut(s) | 85, 142, 166, 178, 199 |
| CviKI_1 | RGCY | 5 cut(s) | 85, 142, 166, 178, 199 |
| CviQI | GTAC | 2 cut(s) | 169, 202 |
| DdeI | CTNAG | 1 cut(s) | 179 |
| DpnI | GATC | 2 cut(s) | 11, 210 |
| DpnII | GATC | 2 cut(s) | 9, 208 |
| Eco130I | CCWWGG | 1 cut(s) | 143 |
| Eco72I | CACGTG | 2 cut(s) | 22, 32 |
| EcoRII | CCWGG | 1 cut(s) | 171 |
| EcoT14I | CCWWGG | 1 cut(s) | 143 |
| ErhI | CCWWGG | 1 cut(s) | 143 |
| FaeI | CATG | 3 cut(s) | 103, 140, 215 |
| FaiI | YATR | 5 cut(s) | 101, 138, 159, 161, 213 |
| FatI | CATG | 3 cut(s) | 99, 136, 211 |
| Fnu4HI | GCNGC | 3 cut(s) | 26, 83, 106 |
| FokI | GGATG | 1 cut(s) | 47 |
| Fsp4HI | GCNGC | 3 cut(s) | 26, 83, 106 |
| GlaI | GCGC | 1 cut(s) | 104 |
| GluI | GCNGC | 3 cut(s) | 26, 83, 106 |
| HapII | CCGG | 1 cut(s) | 88 |
| HgaI | GACGC | 1 cut(s) | 62 |
| HhaI | GCGC | 1 cut(s) | 105 |
| Hin1II | CATG | 3 cut(s) | 103, 140, 215 |
| Hin6I | GCGC | 1 cut(s) | 103 |
| HinP1I | GCGC | 1 cut(s) | 103 |
| HpaII | CCGG | 1 cut(s) | 88 |
| Hpy188I | TCNGA | 1 cut(s) | 78 |
| Hpy188III | TCNNGA | 1 cut(s) | 51 |
| Hpy99I | CGWCG | 1 cut(s) | 78 |
| HpyCH4IV | ACGT | 2 cut(s) | 21, 31 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 150 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 34, 79, 111 |
| HpyF3I | CTNAG | 1 cut(s) | 179 |
| HpySE526I | ACGT | 2 cut(s) | 21, 31 |
| Hsp92II | CATG | 3 cut(s) | 103, 140, 215 |
| HspAI | GCGC | 1 cut(s) | 103 |
| Kzo9I | GATC | 2 cut(s) | 9, 208 |
| LmnI | GCTCC | 4 cut(s) | 90, 133, 163, 175 |
| LpnPI | CCDG | 4 cut(s) | 101, 158, 185, 190 |
| Lsp1109I | GCAGC | 1 cut(s) | 94 |
| MaeII | ACGT | 2 cut(s) | 21, 31 |
| MalI | GATC | 2 cut(s) | 11, 210 |
| MbiI | CCGCTC | 1 cut(s) | 37 |
| MboI | GATC | 2 cut(s) | 9, 208 |
| MluCI | AATT | 2 cut(s) | 187, 217 |
| MmeI | TCCRAC | 1 cut(s) | 56 |
| MnlI | CCTC | 1 cut(s) | 125 |
| MspI | CCGG | 1 cut(s) | 88 |
| MspR9I | CCNGG | 2 cut(s) | 89, 173 |
| MvaI | CCWGG | 1 cut(s) | 173 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 34, 79, 111 |
| NciI | CCSGG | 1 cut(s) | 89 |
| NdeII | GATC | 2 cut(s) | 9, 208 |
| NlaIII | CATG | 3 cut(s) | 103, 140, 215 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 12, 18 |
| PfoI | TCCNGGA | 1 cut(s) | 87 |
| PkrI | GCNGC | 3 cut(s) | 27, 84, 107 |
| PmaCI | CACGTG | 2 cut(s) | 22, 32 |
| PmlI | CACGTG | 2 cut(s) | 22, 32 |
| Ppu21I | YACGTR | 2 cut(s) | 22, 32 |
| Psp6I | CCWGG | 1 cut(s) | 171 |
| PspCI | CACGTG | 2 cut(s) | 22, 32 |
| PspGI | CCWGG | 1 cut(s) | 171 |
| RsaI | GTAC | 2 cut(s) | 170, 203 |
| RsaNI | GTAC | 2 cut(s) | 169, 202 |
| SatI | GCNGC | 3 cut(s) | 26, 83, 106 |
| Sau3AI | GATC | 2 cut(s) | 9, 208 |
| ScrFI | CCNGG | 2 cut(s) | 89, 173 |
| SetI | ASST | 5 cut(s) | 24, 34, 87, 168, 180 |
| Sse9I | AATT | 2 cut(s) | 187, 217 |
| SsiI | CCGC | 3 cut(s) | 26, 37, 106 |
| StyD4I | CCNGG | 2 cut(s) | 87, 171 |
| StyI | CCWWGG | 1 cut(s) | 143 |
| TaiI | ACGT | 2 cut(s) | 24, 34 |
| TaqI | TCGA | 1 cut(s) | 50 |
| TasI | AATT | 2 cut(s) | 187, 217 |
| TatI | WGTACW | 1 cut(s) | 201 |
| TauI | GCSGC | 2 cut(s) | 28, 108 |
| TseI | GCWGC | 1 cut(s) | 82 |
| TspDTI | ATGAA | 1 cut(s) | 88 |