Rh6CG389400

DNA topoisomerase 2-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0003647
Physical Location & Seq
Reverse (-)
57615989 .. 57623665
7677 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG389400.1

Sequence Viewer

Length: 2946 bp
ATGCTCCAAACGCCGCCGTTTAAGGGCGCCAATGTCTTCATGTCGCGGAAGCTGGTCCCGCCGGAGATTTTCGACGCGCTTCACGACGCTCTCAAGCTCAACGGCGCCAATGTCGTCCTCTGCTCCGACCCCTCGCGCACCGGCCCCGACGACTACCACGTCATCGCTTCCTCCGATCACGAAAAGTTTGAGGATCTCAGAGCCAAGGGTTGCCAACTGCTAGGTCCTCAATGCGTGTTTTCTTGTGCAAACGAGCATAGGTCGCTCCCTAAACAAAAGTTTACTTGTTGCCTAGCATTGGATGGTGTCAATGTACTTGCCTCTGGTTTTGAGGCAGATGAAAAGGTTAAGATAAAGAACTTAGTAACATCAATGGGGGGAGTTTTACATACTAAAACATCTTTGGATGTTAGCTTTGTCATTGCGAAGAATGTCTTGGCTGCAAAATACAAGTGGGCTGTAAATACATTGAAGAAGCCAGTTCTTACTATTAATTGGTTATATCAATGCTGCAATGAACATCGCATTGTTCCTCAAGAATCCTTTAGGGTTCTTCCTGTTTCTGGTTTGACGATCTGTGTTACCAGAATTCCATCAGATGAACGGAAGAAGATTGAAAATCTTATCACAGAAAATGGTGGACATTATTCTGCTGAACTTACAAGGAAGTGCACACATTTGATTTGTGATGCTCCAGAAGGTGATAAATACAAGGTTGCACGAATGTGGGGTCATATTTATATTGTAACTCGGAAATGGTTTGATCAATCGATTGGTAGAAGAGCTTGTCTCAGTGAAGAGTCCTTTCCAGTTCAAGGTGGTTCTCTATCTTCAAAGAAGATTGTAAAGGGCTGCTTTGCTTCACAAAATAGCCAAAGCAACTGTAGTGGGAAGTTGCAAGCTGTACCACCATCAGTGGTTGCAGATTCAAATTTTACAGCTGCTACTTGTGGTGGGATTGTGGATTCTGATCTAGAAGCTACTGTCTCACAAACCATGCTTCCAACATTCTCTTGTGCCCCTTTATCTTGTAAAGAGGGGGATATCAAAGTCCCTCCCTTGGAATCAAAATGTGAGGTGGCCCTTGAAGATTGTGTTGCTGATGATTCTCAGTCTGAAGACAATGACCTGTACTTGTCAGAATGTAAAATATCACTTGTTGGCTTCGAAGCTTCTGAAATGCGTAGATTGGTTAATATTATTCGCAGAGGTGGGGGCTCCCGTTATATGTCATTCAATGACAGGTTGACACACATAGTAGTTGGAACTCCTTCTGAAATTGAAAAGAAGGAGGTAAGGGGATTTGCAGCTTTAGGTGTCATTCATGTGGTTAGAGCCACCTGGCTTGAAGATTGTGATCGTGAGAAGAAAGAGATACCAGTTCTCCAGAGGCACAGTGCCTGTGATATACTTCTCCCTAAAGGAGCACTGACAGGTACGAGTGGTATGATTCAAGGGAAAATTTCTACTATTCCTCAGAGGATGCCTTCTGATCAGTTATGTGGTAATAGGAGTACGGCAACTGGAATAGATTCATTGGAGAAAAATAGAGAGGAGGTATCAGAAATAAATAGGAATGATGACAGGTCTGTGAAAGAAGCAGTTGGATCATTCGATAAGAATAAACTTCCTGTCATAAAGGATAAAAGTAAGATCCAGTTACATGACAAAACAAGGGGTCAACAGAAGATACAACATGAATCAGGTGTTCAAAATGGCAAACCATCTTCTGTATTTAAGGGGAAATTTTTCCGCTTTTCAAATTCCTTTCCTGAAGACAGGAGAGGTGAAATTATTGAATGGGTAAATCAAGGGGGAGGATTGGTAATTGATGCTCATTTTAAACAGAAGGCTCACTTCACTATTGAGTGTCATGGTGTGATACCCAGATCTGTGGACACTACTCGAACTACATATGTATCAAGTCACTGGATCCGGTCATGTTTGGAGGATGGATGCTTGCTGGATGTTAGTAATCACATTCTCTATACTCCTCTTCCCTGCCGGACTCCGTTGCCTGGATTTGAAAGCTTTCGGTTTTCTGTTTCACAATACGAAGAGAAAGATAGACTGTTACTAAGAAATCTGTGTTTTACACTGGGAGCTAAATTTGTGGAGAAACTGAATAAGAAGGTTACCCATTTGTTATGCAAGTTTACCAGTGGAAGTAAGTATGAGGCTGCTTGTAAATGGGGAATACACCGAATTACCTGTGACTGGTTATATGAGTGCGTGAAGCAGAATAAAGTCATTGCTCTTGACCAATTTTATCCTAAAGAAGTTACTGCTGAAGATCGAGAGGCAGGGTTATGCACTACAAGTCAGTATCCTACACAAGATTTTCGAATGATATCTGTAGGCAATCCATCTCAATGTCCAAGTCAATCACAAGATCGGAGCTTCTCACCACCTCAAGCCATTGGTCGTAGAAATGACAATATCAGGGAAGAAGCCAAAGCATTAAGTTGCAATAAAAAGGCAAGGGTTTTGGAAGATGTTGACCAAAGCGGTCTTCTTTCTTCAGGGATAAGTTCAAGTATTCCTTCCTATACAACTGGAGACAAGAAAGTGAACACCTTTGGTGAAGTATCCCAAGTTGTTCCTGATGTAGCTTCTGCTATTGAGGACTTGTTGGAGCAGACAACTAAGATTCATGATCAGAATTCACCAGAGAGTATTTTTGCATCGGATTGTGAATTGCTTGGTCAAGACCTGCCGGGTTCTCACTCCGTGGGTGGACTATCGAGACACTGGTTAAAGAGTGCTGGGAAAAAAGATGACATCAACAATCCTCCTGGAAAACAAACTGCTGGCTTGTATGATCAGTTTAGTGAAACACAGACCGATTCTCAGGTTGTTGGATATGAGGAAGATTTGTCAGGCCGGCAAATGCTTATAGACAGAGTTCGAACTCGAAGTAGTAGTAGGACTGCTTCAAGTTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000076 GO:0000785 GO:0001932 GO:0001934 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007049 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009893 GO:0009987 GO:0010556 GO:0010562 GO:0010604 GO:0016043 GO:0019219 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022402 GO:0022607 GO:0030174 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031570 GO:0032268 GO:0032270 GO:0033036 GO:0033135 GO:0033138 GO:0033260 GO:0033365 GO:0033554 GO:0033674 GO:0034502 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0035561 GO:0035563 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044786 GO:0045786 GO:0045859 GO:0045860 GO:0045937 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051098 GO:0051099 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051641 GO:0051716 GO:0051726 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070727 GO:0071163 GO:0071165 GO:0071168 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
BRCT BRCT_2 PTCB-BRCT

Protein Analysis

981

Amino Acids

108.6

Weight (kDa)

7.78

Isoelectric Point (pI)

50.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTCB-BRCT PF12738 105 - 166 3.4e-06 twin BRCT domain
BRCT PF00533 186 - 258 1.1e-12 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 190 - 253 4.9e-23 twin BRCT domain
BRCT PF00533 377 - 452 4.4e-06 BRCA1 C Terminus (BRCT) domain
BRCT PF00533 675 - 745 9e-08 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 680 - 740 3.8e-18 twin BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
Acc36I ACCTGC 1 cut(s) 2721
AccB1I GGYRCC 2 cut(s) 26, 104
AccII CGCG 3 cut(s) 46, 77, 136
AciI CCGC 5 cut(s) 14, 46, 59, 1753, 2508
AclWI GGATC 5 cut(s) 201, 1615, 1648, 1927, 1940
AcsI RAATTY 7 cut(s) 588, 931, 1461, 1745, 1762, 2108, 2662
AcuI CTGAAG 4 cut(s) 1137, 1794, 2310, 2505
AcyI GRCGYC 2 cut(s) 27, 105
AdeI CACNNNGTG 1 cut(s) 2731
AfaI GTAC 5 cut(s) 315, 906, 1133, 1438, 1516
AfiI CCNNNNNNNGG 7 cut(s) 23, 298, 563, 815, 1060, 2018, 2217
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 3 cut(s) 1340, 2017, 2794
AjuI GAANNNNNNNTTGG 4 cut(s) 419, 451, 2496, 2528
AleI CACNNNNGTG 1 cut(s) 724
Alw21I GWGCWC 2 cut(s) 674, 1429
Alw26I GTCTC 4 cut(s) 794, 991, 2553, 2740
Alw44I GTGCAC 1 cut(s) 670
AlwI GGATC 5 cut(s) 201, 1615, 1648, 1927, 1940
AlwNI CAGNNNCTG 1 cut(s) 1401
AoxI GGCC 3 cut(s) 142, 1080, 2881
ApaLI GTGCAC 1 cut(s) 670
ApeKI GCWGC 6 cut(s) 440, 510, 852, 941, 1307, 2180
ApoI RAATTY 7 cut(s) 588, 931, 1461, 1745, 1762, 2108, 2662
ArsI GACNNNNNNTTYG 2 cut(s) 715, 747
AseI ATTAAT 1 cut(s) 492
Asp700I GAANNNNTTC 4 cut(s) 1270, 1531, 1748, 2031
AspLEI GCGC 4 cut(s) 29, 79, 107, 138
AspS9I GGNCC 4 cut(s) 55, 143, 224, 1081
AsuC2I CCSGG 1 cut(s) 2718
AsuHPI GGTGA 5 cut(s) 713, 1799, 2397, 2594, 2658
AsuII TTCGAA 3 cut(s) 1167, 2344, 2908
AvaII GGWCC 2 cut(s) 55, 224
BaeGI GKGCMC 2 cut(s) 674, 1021
BaeI ACNNNNGTAYC 2 cut(s) 1902, 1935
BamHI GGATCC 1 cut(s) 1932
BanI GGYRCC 2 cut(s) 26, 104
BanII GRGCYC 1 cut(s) 1220
BarI GAAGNNNNNNTAC 1 cut(s) 2917
BbsI GAAGAC 4 cut(s) 28, 1125, 1782, 2504
Bbv12I GWGCWC 2 cut(s) 674, 1429
BbvI GCAGC 6 cut(s) 427, 497, 839, 928, 1319, 2167
BccI CCATC 6 cut(s) 296, 601, 919, 1732, 1946, 2374
BceAI ACGGC 2 cut(s) 118, 1533
BciT130I CCWGG 3 cut(s) 1342, 2019, 2796
BciVI GTATCC 2 cut(s) 2337, 2599
BclI TGATCA 4 cut(s) 763, 1492, 2656, 2821
BcnI CCSGG 1 cut(s) 2718
BcoDI GTCTC 4 cut(s) 794, 991, 2553, 2740
BfaI CTAG 4 cut(s) 221, 293, 974, 2944
BfmI CTRYAG 2 cut(s) 883, 2355
BfoI RGCGCY 2 cut(s) 30, 108
BfuAI ACCTGC 1 cut(s) 2721
BfuI GTATCC 2 cut(s) 2337, 2599
BglII AGATCT 1 cut(s) 1889
BisI GCNGC 7 cut(s) 14, 441, 511, 853, 942, 1308, 2181
BlsI GCNGC 7 cut(s) 15, 442, 512, 854, 943, 1309, 2182
Bme1390I CCNGG 4 cut(s) 1342, 2019, 2718, 2796
Bme18I GGWCC 2 cut(s) 55, 224
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 4 cut(s) 55, 143, 224, 1081
BmiI GGNNCC 6 cut(s) 28, 57, 106, 145, 1219, 1934
BmrFI CCNGG 4 cut(s) 1342, 2019, 2718, 2796
BmrI ACTGGG 1 cut(s) 2108
BmsI GCATC 5 cut(s) 679, 1473, 1822, 1946, 2693
BmuI ACTGGG 1 cut(s) 2108
BpiI GAAGAC 4 cut(s) 28, 1125, 1782, 2504
BplI GAGNNNNNCTC 2 cut(s) 774, 806
BpmI CTGGAG 3 cut(s) 678, 1370, 2577
Bpu14I TTCGAA 3 cut(s) 1167, 2344, 2908
BpuEI CTTGAG 3 cut(s) 77, 519, 2397
BpuMI CCSGG 1 cut(s) 2718
Bsa29I ATCGAT 1 cut(s) 770
BsaBI GATNNNNATC 2 cut(s) 969, 1356
BsaHI GRCGYC 2 cut(s) 27, 105
BsaJI CCNNGG 3 cut(s) 204, 1059, 2730
BsaWI WCCGGW 1 cut(s) 1935
BsaXI ACNNNNNCTCC 4 cut(s) 1368, 1398, 1809, 1839
Bsc4I CCNNNNNNNGG 7 cut(s) 23, 298, 563, 815, 1060, 2018, 2217
Bse118I RCCGGY 2 cut(s) 140, 2883
Bse3DI GCAATG 3 cut(s) 420, 520, 2250
Bse8I GATNNNNATC 2 cut(s) 969, 1356
BseBI CCWGG 3 cut(s) 1342, 2019, 2796
BseCI ATCGAT 1 cut(s) 770
BseDI CCNNGG 3 cut(s) 204, 1059, 2730
BseGI GGATG 6 cut(s) 307, 412, 1488, 1957, 1961, 1972
BseJI GATNNNNATC 2 cut(s) 969, 1356
BseLI CCNNNNNNNGG 7 cut(s) 23, 298, 563, 815, 1060, 2018, 2217
BseMI GCAATG 3 cut(s) 420, 520, 2250
BseMII CTCAG 5 cut(s) 211, 805, 1124, 1490, 2864
BseRI GAGGAG 2 cut(s) 1568, 1983
BseSI GKGCMC 2 cut(s) 674, 1021
BseXI GCAGC 6 cut(s) 427, 497, 839, 928, 1319, 2167
BseYI CCCAGC 1 cut(s) 2765
Bsh1236I CGCG 3 cut(s) 46, 77, 136
BshFI GGCC 3 cut(s) 144, 1082, 2883
BshNI GGYRCC 2 cut(s) 26, 104
BshVI ATCGAT 1 cut(s) 770
BsiHKAI GWGCWC 2 cut(s) 674, 1429
BsiSI CCGG 6 cut(s) 62, 141, 1936, 2005, 2717, 2884
BslFI GGGAC 2 cut(s) 41, 1037
BslI CCNNNNNNNGG 7 cut(s) 23, 298, 563, 815, 1060, 2018, 2217
BsmAI GTCTC 4 cut(s) 794, 991, 2553, 2740
BsmFI GGGAC 2 cut(s) 41, 1037
BsnI GGCC 3 cut(s) 144, 1082, 2883
Bsp119I TTCGAA 3 cut(s) 1167, 2344, 2908
Bsp1286I GDGCHC 4 cut(s) 674, 1021, 1220, 1429
BspACI CCGC 5 cut(s) 14, 46, 59, 1753, 2508
BspANI GGCC 3 cut(s) 144, 1082, 2883
BspCNI CTCAG 5 cut(s) 210, 804, 1123, 1489, 2863
BspDI ATCGAT 1 cut(s) 770
BspFNI CGCG 3 cut(s) 46, 77, 136
BspHI TCATGA 1 cut(s) 2653
BspLI GGNNCC 6 cut(s) 28, 57, 106, 145, 1219, 1934
BspMI ACCTGC 1 cut(s) 2721
BspPI GGATC 5 cut(s) 201, 1615, 1648, 1927, 1940
BspQI GCTCTTC 1 cut(s) 775
BspT104I TTCGAA 3 cut(s) 1167, 2344, 2908
BspT107I GGYRCC 2 cut(s) 26, 104
BsrDI GCAATG 3 cut(s) 420, 520, 2250
BsrFI RCCGGY 2 cut(s) 140, 2883
BssAI RCCGGY 2 cut(s) 140, 2883
BssECI CCNNGG 3 cut(s) 204, 1059, 2730
BssNI GRCGYC 2 cut(s) 27, 105
BssT1I CCWWGG 2 cut(s) 204, 1059
Bst2UI CCWGG 3 cut(s) 1342, 2019, 2796
Bst4CI ACNGT 4 cut(s) 884, 985, 1397, 2073
Bst6I CTCTTC 4 cut(s) 775, 792, 2001, 2052
BstACI GRCGYC 2 cut(s) 27, 105
BstBI TTCGAA 3 cut(s) 1167, 2344, 2908
BstC8I GCNNGC 4 cut(s) 900, 1961, 2812, 2885
BstDEI CTNAG 8 cut(s) 197, 361, 791, 1110, 1476, 2078, 2646, 2850
BstDSI CCRYGG 1 cut(s) 2730
BstEII GGTNACC 1 cut(s) 2134
BstF5I GGATG 6 cut(s) 307, 412, 1488, 1957, 1961, 1972
BstFNI CGCG 3 cut(s) 46, 77, 136
BstH2I RGCGCY 2 cut(s) 30, 108
BstHHI GCGC 4 cut(s) 29, 79, 107, 138
BstMAI GTCTC 4 cut(s) 794, 991, 2553, 2740
BstMWI GCNNNNNNNGC 3 cut(s) 10, 58, 262
BstNI CCWGG 3 cut(s) 1342, 2019, 2796
BstPI GGTNACC 1 cut(s) 2134
BstSCI CCNGG 4 cut(s) 1340, 2017, 2716, 2794
BstSFI CTRYAG 2 cut(s) 883, 2355
BstSLI GKGCMC 2 cut(s) 674, 1021
BstUI CGCG 3 cut(s) 46, 77, 136
BstV1I GCAGC 6 cut(s) 427, 497, 839, 928, 1319, 2167
BstV2I GAAGAC 4 cut(s) 28, 1125, 1782, 2504
BstX2I RGATCY 4 cut(s) 193, 1653, 1889, 1932
BstXI CCANNNNNNTGG 1 cut(s) 1894
BstYI RGATCY 4 cut(s) 193, 1653, 1889, 1932
Bsu15I ATCGAT 1 cut(s) 770
BsuI GTATCC 2 cut(s) 2337, 2599
BsuRI GGCC 3 cut(s) 144, 1082, 2883
BsuTUI ATCGAT 1 cut(s) 770
BtgI CCRYGG 1 cut(s) 2730
BtgZI GCGATG 2 cut(s) 148, 506
BtrI CACGTC 1 cut(s) 160
BtsCI GGATG 6 cut(s) 307, 412, 1488, 1957, 1961, 1972
BtsIMutI CAGTG 8 cut(s) 799, 921, 1402, 1427, 1927, 2096, 2167, 2749
BveI ACCTGC 1 cut(s) 2721
Cac8I GCNNGC 4 cut(s) 900, 1961, 2812, 2885
CaiI CAGNNNCTG 1 cut(s) 1401
CciI TCATGA 1 cut(s) 2653
CfoI GCGC 4 cut(s) 29, 79, 107, 138
Cfr10I RCCGGY 2 cut(s) 140, 2883
Cfr13I GGNCC 4 cut(s) 55, 143, 224, 1081
ClaI ATCGAT 1 cut(s) 770
CseI GACGC 2 cut(s) 83, 95
Csp6I GTAC 5 cut(s) 314, 905, 1132, 1437, 1515
CspCI CAANNNNNGTGG 4 cut(s) 868, 903, 1327, 1362
CviAII CATG 8 cut(s) 40, 997, 1325, 1664, 1697, 1874, 1941, 2654
CviQI GTAC 5 cut(s) 314, 905, 1132, 1437, 1515
DdeI CTNAG 8 cut(s) 197, 361, 791, 1110, 1476, 2078, 2646, 2850
DinI GGCGCC 2 cut(s) 28, 106
DraI TTTAAA 1 cut(s) 1843
DraIII CACNNNGTG 1 cut(s) 2731
DrdI GACNNNNNNGTC 1 cut(s) 158
DseDI GACNNNNNNGTC 1 cut(s) 158
Eam1104I CTCTTC 4 cut(s) 775, 792, 2001, 2052
EarI CTCTTC 4 cut(s) 775, 792, 2001, 2052
Eco130I CCWWGG 2 cut(s) 204, 1059
Eco24I GRGCYC 1 cut(s) 1220
Eco32I GATATC 2 cut(s) 1045, 2352
Eco47I GGWCC 2 cut(s) 55, 224
Eco57I CTGAAG 4 cut(s) 1137, 1794, 2310, 2505
Eco91I GGTNACC 1 cut(s) 2134
EcoO109I RGGNCCY 1 cut(s) 224
EcoO65I GGTNACC 1 cut(s) 2134
EcoRI GAATTC 2 cut(s) 588, 2662
EcoRII CCWGG 3 cut(s) 1340, 2017, 2794
EcoRV GATATC 2 cut(s) 1045, 2352
EcoT14I CCWWGG 2 cut(s) 204, 1059
EcoT38I GRGCYC 1 cut(s) 1220
EgeI GGCGCC 2 cut(s) 28, 106
EheI GGCGCC 2 cut(s) 28, 106
ErhI CCWWGG 2 cut(s) 204, 1059
FaeI CATG 8 cut(s) 43, 1000, 1328, 1667, 1700, 1877, 1944, 2657
FalI AAGNNNNNCTT 8 cut(s) 419, 451, 839, 871, 1841, 1873, 2527, 2559
FaqI GGGAC 2 cut(s) 41, 1037
FatI CATG 8 cut(s) 39, 996, 1324, 1663, 1696, 1873, 1940, 2653
FauI CCCGC 1 cut(s) 66
FauNDI CATATG 1 cut(s) 1915
FbaI TGATCA 4 cut(s) 763, 1492, 2656, 2821
Fnu4HI GCNGC 7 cut(s) 14, 441, 511, 853, 942, 1308, 2181
FokI GGATG 6 cut(s) 314, 419, 1495, 1964, 1968, 1979
FriOI GRGCYC 1 cut(s) 1220
Fsp4HI GCNGC 7 cut(s) 14, 441, 511, 853, 942, 1308, 2181
FspBI CTAG 4 cut(s) 221, 293, 974, 2944
GlaI GCGC 4 cut(s) 28, 78, 106, 137
GluI GCNGC 7 cut(s) 14, 441, 511, 853, 942, 1308, 2181
GsaI CCCAGC 1 cut(s) 2769
GsuI CTGGAG 3 cut(s) 678, 1370, 2577
HaeII RGCGCY 2 cut(s) 30, 108
HaeIII GGCC 3 cut(s) 144, 1082, 2883
HapII CCGG 6 cut(s) 62, 141, 1936, 2005, 2717, 2884
HgaI GACGC 2 cut(s) 83, 95
HhaI GCGC 4 cut(s) 29, 79, 107, 138
Hin1I GRCGYC 2 cut(s) 27, 105
Hin1II CATG 8 cut(s) 43, 1000, 1328, 1667, 1700, 1877, 1944, 2657
Hin6I GCGC 4 cut(s) 27, 77, 105, 136
HinP1I GCGC 4 cut(s) 27, 77, 105, 136
HincII GTYRAC 3 cut(s) 1248, 1682, 2500
HindII GTYRAC 3 cut(s) 1248, 1682, 2500
HindIII AAGCTT 2 cut(s) 1170, 2029
HpaII CCGG 6 cut(s) 62, 141, 1936, 2005, 2717, 2884
HphI GGTGA 5 cut(s) 713, 1799, 2397, 2594, 2658
Hpy99I CGWCG 3 cut(s) 77, 89, 152
HpyAV CCTTC 7 cut(s) 692, 1281, 1282, 1497, 1843, 2125, 2553
HpyCH4III ACNGT 4 cut(s) 884, 985, 1397, 2073
HpyCH4IV ACGT 1 cut(s) 159
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 58, 262
HpyF3I CTNAG 8 cut(s) 197, 361, 791, 1110, 1476, 2078, 2646, 2850
HpySE526I ACGT 1 cut(s) 159
Hsp92I GRCGYC 2 cut(s) 27, 105
Hsp92II CATG 8 cut(s) 43, 1000, 1328, 1667, 1700, 1877, 1944, 2657
HspAI GCGC 4 cut(s) 27, 77, 105, 136
KasI GGCGCC 2 cut(s) 26, 104
KroI GCCGGC 1 cut(s) 2883
KroNI GCCGGC 1 cut(s) 2885
Ksp22I TGATCA 4 cut(s) 763, 1492, 2656, 2821
LguI GCTCTTC 1 cut(s) 775
LmnI GCTCC 9 cut(s) 9, 128, 270, 697, 1223, 1424, 2102, 2397, 2635
Lsp1109I GCAGC 6 cut(s) 427, 497, 839, 928, 1319, 2167
LweI GCATC 5 cut(s) 679, 1473, 1822, 1946, 2693
MaeI CTAG 4 cut(s) 221, 293, 974, 2944
MaeII ACGT 1 cut(s) 159
MaeIII GTNAC 9 cut(s) 364, 580, 745, 1659, 1925, 2073, 2134, 2213, 2281
MflI RGATCY 4 cut(s) 193, 1653, 1889, 1932
MhlI GDGCHC 4 cut(s) 674, 1021, 1220, 1429
Mly113I GGCGCC 2 cut(s) 27, 105
MlyI GAGTC 2 cut(s) 809, 2002
MmeI TCCRAC 6 cut(s) 150, 1028, 1243, 1585, 2613, 2839
MroNI GCCGGC 1 cut(s) 2883
MroXI GAANNNNTTC 4 cut(s) 1270, 1531, 1748, 2031
MseI TTAA 8 cut(s) 21, 348, 492, 1194, 1737, 1842, 2462, 2756
MslI CAYNNNNRTG 3 cut(s) 724, 1325, 2371
MspA1I CMGCKG 1 cut(s) 941
MspI CCGG 6 cut(s) 62, 141, 1936, 2005, 2717, 2884
MspR9I CCNGG 4 cut(s) 1342, 2019, 2718, 2796
MvaI CCWGG 3 cut(s) 1342, 2019, 2796
MvnI CGCG 3 cut(s) 46, 77, 136
MwoI GCNNNNNNNGC 3 cut(s) 10, 58, 262
NaeI GCCGGC 1 cut(s) 2885
NarI GGCGCC 2 cut(s) 27, 105
NciI CCSGG 1 cut(s) 2718
NdeI CATATG 1 cut(s) 1915
NgoMIV GCCGGC 1 cut(s) 2883
NlaIII CATG 8 cut(s) 43, 1000, 1328, 1667, 1700, 1877, 1944, 2657
NlaIV GGNNCC 6 cut(s) 28, 57, 106, 145, 1219, 1934
NmuCI GTSAC 2 cut(s) 1925, 2213
NspV TTCGAA 3 cut(s) 1167, 2344, 2908
OliI CACNNNNGTG 1 cut(s) 724
PagI TCATGA 1 cut(s) 2653
PciSI GCTCTTC 1 cut(s) 775
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 156, 171
PdiI GCCGGC 1 cut(s) 2885
PdmI GAANNNNTTC 4 cut(s) 1270, 1531, 1748, 2031
PfoI TCCNGGA 1 cut(s) 2794
PkrI GCNGC 7 cut(s) 15, 442, 512, 854, 943, 1309, 2182
PleI GAGTC 2 cut(s) 808, 2002
PluTI GGCGCC 2 cut(s) 30, 108
PpsI GAGTC 2 cut(s) 808, 2002
PpuMI RGGWCCY 1 cut(s) 224
PshBI ATTAAT 1 cut(s) 492
Psp5II RGGWCCY 1 cut(s) 224
Psp6I CCWGG 3 cut(s) 1340, 2017, 2794
PspEI GGTNACC 1 cut(s) 2134
PspFI CCCAGC 1 cut(s) 2765
PspGI CCWGG 3 cut(s) 1340, 2017, 2794
PspN4I GGNNCC 6 cut(s) 28, 57, 106, 145, 1219, 1934
PspPI GGNCC 4 cut(s) 55, 143, 224, 1081
PspPPI RGGWCCY 1 cut(s) 224
PstNI CAGNNNCTG 1 cut(s) 1401
PsuI RGATCY 4 cut(s) 193, 1653, 1889, 1932
PvuII CAGCTG 1 cut(s) 941
RsaI GTAC 5 cut(s) 315, 906, 1133, 1438, 1516
RsaNI GTAC 5 cut(s) 314, 905, 1132, 1437, 1515
RseI CAYNNNNRTG 3 cut(s) 724, 1325, 2371
SapI GCTCTTC 1 cut(s) 775
SaqAI TTAA 8 cut(s) 21, 348, 492, 1194, 1737, 1842, 2462, 2756
SatI GCNGC 7 cut(s) 14, 441, 511, 853, 942, 1308, 2181
Sau96I GGNCC 4 cut(s) 55, 143, 224, 1081
SchI GAGTC 2 cut(s) 809, 2002
ScrFI CCNGG 4 cut(s) 1342, 2019, 2718, 2796
SduI GDGCHC 4 cut(s) 674, 1021, 1220, 1429
SfaNI GCATC 5 cut(s) 679, 1473, 1822, 1946, 2693
SfcI CTRYAG 2 cut(s) 883, 2355
SfoI GGCGCC 2 cut(s) 28, 106
SfuI TTCGAA 3 cut(s) 1167, 2344, 2908
SinI GGWCC 2 cut(s) 55, 224
SmiMI CAYNNNNRTG 3 cut(s) 724, 1325, 2371
SmlI CTYRAG 3 cut(s) 92, 534, 2412
SmoI CTYRAG 3 cut(s) 92, 534, 2412
SsiI CCGC 5 cut(s) 14, 46, 59, 1753, 2508
SspDI GGCGCC 2 cut(s) 26, 104
SspI AATATT 1 cut(s) 1198
SspMI CTAG 4 cut(s) 221, 293, 974, 2944
StyD4I CCNGG 4 cut(s) 1340, 2017, 2716, 2794
StyI CCWWGG 2 cut(s) 204, 1059
TaaI ACNGT 4 cut(s) 884, 985, 1397, 2073
TaiI ACGT 1 cut(s) 162
TaqII GACCGA 1 cut(s) 2858
TatI WGTACW 2 cut(s) 313, 1131
TauI GCSGC 1 cut(s) 16
Tru1I TTAA 8 cut(s) 21, 348, 492, 1194, 1737, 1842, 2462, 2756
Tru9I TTAA 8 cut(s) 21, 348, 492, 1194, 1737, 1842, 2462, 2756
TscAI CASTG 8 cut(s) 799, 921, 1402, 1434, 1934, 2103, 2167, 2756
TseFI GTSAC 2 cut(s) 1925, 2213
TseI GCWGC 6 cut(s) 440, 510, 852, 941, 1307, 2180
Tsp45I GTSAC 2 cut(s) 1925, 2213
TspDTI ATGAA 8 cut(s) 28, 354, 531, 615, 1313, 1524, 1713, 2642
TspGWI ACGGA 3 cut(s) 619, 2001, 2719
TspRI CASTG 8 cut(s) 799, 921, 1402, 1434, 1934, 2103, 2167, 2756
VneI GTGCAC 1 cut(s) 670
VpaK11BI GGWCC 2 cut(s) 55, 224
VspI ATTAAT 1 cut(s) 492
XapI RAATTY 7 cut(s) 588, 931, 1461, 1745, 1762, 2108, 2662
XbaI TCTAGA 1 cut(s) 973
XmnI GAANNNNTTC 4 cut(s) 1270, 1531, 1748, 2031
XspI CTAG 4 cut(s) 221, 293, 974, 2944
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.