Prupe.1G489800_v2.0.a1

DNA topoisomerase 2-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
40770284 .. 40777160
6877 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G489800.1

Sequence Viewer

Length: 3057 bp
ATGCTGAAGACGACGACGTTTAAGGGAGCCAATGTCTTCATGTCGCGGAACCTGGTCCCGCCCGAGATCTTCGACGCCCTTCACGACGCTCTCAAGCTCAATGGAGCCAATGTCTTCCTCTGTTGCGACCCCTCGCGAACCGGGCCGGACGACTACCACGTCATCGCTTCCTCCGATCACGAAAAGTTTGAGGATCTTAGAGCCAAGGGCTGTAATTTGCTCGGCCCTCAATGCGTGTTTTCTTGTGCAAACCAGCACAGGGCTCTGCCTAAACAAGGGTTTACTTGTTGCCTTGCAATGGATGGTTTCAAAGTACTTGCCTCTGGTTTTGAGGGTGACGAAAAGGCTAAGATAGAGAAGTTAGTAACAGCAATGGGGGGAGTTTTGCATGCTAAAGCATCTTTGGATGTTAACTTTGTTATTGTGAAAAATGTCTTGGCTGGAAAATACAAGGCTATTACTGAATTAGTTCTTTTTATGCAGTGGGCCTTGAATACATTAAAGAAGCCGATTGTCACTATTAATTGGTTATCTCAGTGCTGGAATGAGCATCGTAATGTTCCTCAAGACTCCTTTAGGGTTCTTCCTTTTTCTGGTTTGATGATCTCTGTAACCAGAATTCCAGCAGATGAACGAAAGGAGATTGAAAAGCTTATCACAGAAAATGGTGGAAAGTATTCTGCTGAACTTACAAAGAACAAGGAATTGGAATCATATGTGTACTTTTCTATGTCAGACCTGCATAACACAAGCAGACTTCAACTTAATGAAGCAAACCTTGAAATATTTATGTTTTTTCCAGAAGGTGACAAATACAAGGTTGCACAAAGATGGGGCCATATTCGTATTGTAACTCGGAAATGGTTTGATCAATCTATTTCTAGAAGAGCTTGTCTTAATGAGGACTCCTATCCTGTTCAAGGTGGTTCTATATCTTCAAATAAAAGTGTAAGGGGTTGCTTTACTTTGCAGAATAGCCAAAGGAGCAGTAGTGGGAACTTGCAATCTGTGCCACCATCGGTGGTTGCAGATTCAAATTTGACAGCTGCTCCTTGTTCTGGGACCATGGATTCTGATTTAGAAGCTACTGTCTCACAAAACATGACCACTATGTTTTCTCATGCTCCTCATGTTGTGAAAAATGAGGATAGTAAAGCACCTCCCTTGGAGTCCAAAAGTGAAGCTTACCTTGATGGTTGCGTTGCTGATGATTCTCAGTCTGAAGACAATGACCTGTACTTGTCAGAATGTAGAATATCTCTTGTTGGCTTTAAGGTTTCTGAAATGCGTAGGTTGGTTAATATGATTCGCAGAGGTGGGGGTTCCCGATACATGTCATTCAATGATAAATTGACACACATAGTAGTTGGAACTCCTTCAGAAATCCAAAAGAAAGAAGTGAGGGGTTTTGCTGCTTTAGGCGTAATTCATGTTGTTAGAACTACCTGGCTTGATGACTGTGATCGTGAGAAAAAGGAGATCCCTGTTCTCCCAAAGCACATTGCCTATGATCTAGTTCTGCCTGAAGGAGCACTGATAGGTATGACTAGCACGATTCAAGGTACAATCTCTACCACTCATCTAAGCATACCTTCTGATCAGTTACATGGGAATACGAGTGCTGCAACTGGAATGGGATCGTTGGAGAAAAAGAGAGAAAAGAAACCAGAAATTAACATGAAAGGTGACAAATCCATGGAAGCAGCTGTTGGACCATCTAAATGGAGTAAACTACCTGTCATAAATGGCAAAAGTAAGGTTCAGTTAAACAATACAATTGACGGTCGACTGATGATGCAATATGATTCAAGTGTTCAAAATGGCAAGGAATCATCTGTCTTTAAGGGGAGATTATTTTGCTTTTCAAATTCCTTTCCTGAAGATAGGAGAGGTGATATCATTCAATGGGTAAATCAAGGAGGAGGAGATGTAGTTGATGGTGATTTAAAACAGAAAGTACACTTCACTATTGAGTGTCATGGTGTGATAACTAGTTCTGTGGATGTTGCTCAAACTACATATGTATCAAGTCACTGGATCCGGTCTTGTTTGGAGGATGGTTGCTTGCTGGATGTTAGTAGTCACATTCTATATGCTCCACTTCCCTGCCGGATTCCTTTGCCTGGATTTGAAAACTTTCGGTTTTGTGTTTCGCAATATGAAGAGAAAGACAGACTGTTACTAAGAAATTTGTGTTTTGTACTTGGAGCTAAATTTGGGGAAAAGCTGACAAAGAAGGTTACCCATTTACTATGCAAGTTTACCAATGGACCAAAGTATCAGGCTGCTTGTATAAAGGGGATACACCCAATTACAGCTGAGTGGGTATATGAGTGTGTGAAGAAGAATAAAGTCGTTGCTCTTGACCAATTTTATCCAAAAAAAGTCACTGCTGAAGATCGAGAGGCAGGGCTGTGTACTATGAGTCAGTATCCTACACAAGCCGTTCAAATGATATCTGCAGGCAATTCATCTGAGTGTCCAAGTCAATCACAAGACCTGAGAACCTCATCAGGAGAAAACATTGGCAGTAGAAATGACAGCCTCAGGGAAGAGGCCAGCGAACCAAGTTTTTGCAATAAGAAGGCAAGGGTTTCAGAAGATGATGGCGAAAAGGGTCTACTTTCGTCTGGGGTACATTTACGTATTCCTGCCTGTACCACTGGAGACAGAAAAGTAAAAAGTTCTGGTGAAGTTTCTCAAGTGGTTCCTGATGTAGCTTCTGCTATTGAGGACTTGTTGGAGCAGACAAGTAAGATTCATGATCAGAAGTCACCAGGGAGGAGTTTGTGTGATAGCAGTATTTTTTCACCGGAGTGTTCGGCTCTTCGTCAAGACCACTCTGATGCTCACTCTGTCATTGGATTATCGAGACACTGGTTAAACAGGGCTGGGAAAAAAGATGACATCCACTATCCTTCTGAAGAACAAAAAGCTGGCTTGTATGATGGCTTTAGTGAAACACAGACCGAGTCTCAGGTTGTAGGCTATGAGGAAGATTTGTCGGGCCGGCAAATGCTTATAGACAGAGTACGAACCCGTAGTAGCCTGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1019

Amino Acids

112.76

Weight (kDa)

6.83

Isoelectric Point (pI)

50.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
Acc36I ACCTGC 1 cut(s) 747
AccI GTMKAC 2 cut(s) 1786, 2620
AccII CGCG 2 cut(s) 46, 136
AciI CCGC 2 cut(s) 46, 59
AclWI GGATC 5 cut(s) 201, 1474, 1645, 2032, 2045
AcsI RAATTY 5 cut(s) 618, 1036, 1867, 2188, 2213
AcuI CTGAAG 7 cut(s) 26, 1242, 1362, 1545, 1899, 2415, 2943
AcyI GRCGYC 1 cut(s) 75
AfiI CCNNNNNNNGG 7 cut(s) 259, 275, 298, 593, 920, 1058, 2123
AflIII ACRYGT 1 cut(s) 1332
AhlI ACTAGT 1 cut(s) 1991
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 5 cut(s) 51, 1445, 2122, 2776, 3048
AjuI GAANNNNNNNTTGG 6 cut(s) 419, 451, 689, 721, 1692, 1724
AleI CACNNNNGTG 1 cut(s) 2815
Alw21I GWGCWC 1 cut(s) 1534
Alw26I GTCTC 4 cut(s) 1096, 2661, 2866, 2979
AlwI GGATC 5 cut(s) 201, 1474, 1645, 2032, 2045
Ama87I CYCGRG 1 cut(s) 62
AoxI GGCC 6 cut(s) 143, 223, 486, 835, 2556, 3007
ApeKI GCWGC 5 cut(s) 1046, 1412, 1622, 1703, 2285
ApoI RAATTY 5 cut(s) 618, 1036, 1867, 2188, 2213
AseI ATTAAT 1 cut(s) 522
Asp700I GAANNNNTTC 4 cut(s) 468, 676, 1375, 2136
AspS9I GGNCC 9 cut(s) 55, 143, 224, 486, 835, 1062, 1712, 2270, 3007
AsuC2I CCSGG 1 cut(s) 142
AsuHPI GGTGA 8 cut(s) 347, 818, 1697, 1904, 1952, 2702, 2766, 2802
AvaI CYCGRG 1 cut(s) 62
AvaII GGWCC 4 cut(s) 55, 1062, 1712, 2270
AxyI CCTNAGG 1 cut(s) 2546
BaeI ACNNNNGTAYC 4 cut(s) 2007, 2040, 2261, 2294
BamHI GGATCC 1 cut(s) 2037
BanII GRGCYC 1 cut(s) 265
BbsI GAAGAC 4 cut(s) 14, 28, 106, 1230
Bbv12I GWGCWC 1 cut(s) 1534
BbvI GCAGC 5 cut(s) 1033, 1399, 1609, 1715, 2272
BccI CCATC 9 cut(s) 296, 825, 1024, 1187, 1723, 1931, 2051, 2600, 2942
BceAI ACGGC 1 cut(s) 2429
BciT130I CCWGG 5 cut(s) 53, 1447, 2124, 2778, 3050
BciVI GTATCC 2 cut(s) 2295, 2442
BclI TGATCA 3 cut(s) 868, 1597, 2764
BcnI CCSGG 1 cut(s) 142
BcoDI GTCTC 4 cut(s) 1096, 2661, 2866, 2979
BcuI ACTAGT 1 cut(s) 1991
BfaI CTAG 4 cut(s) 882, 1514, 1548, 1992
BfmI CTRYAG 1 cut(s) 2460
BfuAI ACCTGC 1 cut(s) 747
BfuI GTATCC 2 cut(s) 2295, 2442
BglII AGATCT 1 cut(s) 66
BisI GCNGC 5 cut(s) 1047, 1413, 1623, 1704, 2286
BlsI GCNGC 5 cut(s) 1048, 1414, 1624, 1705, 2287
BmcAI AGTACT 1 cut(s) 315
Bme1390I CCNGG 6 cut(s) 53, 142, 1447, 2124, 2778, 3050
Bme18I GGWCC 4 cut(s) 55, 1062, 1712, 2270
BmeT110I CYCGRG 1 cut(s) 62
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 9 cut(s) 55, 143, 224, 486, 835, 1062, 1712, 2270, 3007
BmiI GGNNCC 9 cut(s) 28, 50, 57, 106, 836, 1063, 1324, 2039, 2709
BmrFI CCNGG 6 cut(s) 53, 142, 1447, 2124, 2778, 3050
BmsI GCATC 4 cut(s) 407, 559, 1785, 2836
BpiI GAAGAC 4 cut(s) 14, 28, 106, 1230
BpmI CTGGAG 1 cut(s) 2685
BpuEI CTTGAG 3 cut(s) 77, 549, 2685
BpuMI CCSGG 1 cut(s) 142
BsaAI YACGTR 1 cut(s) 2645
BsaHI GRCGYC 1 cut(s) 75
BsaJI CCNNGG 5 cut(s) 204, 1065, 1164, 1695, 2777
BsaWI WCCGGW 2 cut(s) 2040, 2812
Bsc4I CCNNNNNNNGG 7 cut(s) 259, 275, 298, 593, 920, 1058, 2123
Bse118I RCCGGY 1 cut(s) 3009
Bse1I ACTGG 4 cut(s) 1633, 2039, 2668, 2882
Bse21I CCTNAGG 1 cut(s) 2546
Bse3DI GCAATG 3 cut(s) 303, 378, 1500
BseBI CCWGG 5 cut(s) 53, 1447, 2124, 2778, 3050
BseDI CCNNGG 5 cut(s) 204, 1065, 1164, 1695, 2777
BseGI GGATG 6 cut(s) 307, 412, 2008, 2062, 2077, 2907
BseLI CCNNNNNNNGG 7 cut(s) 259, 275, 298, 593, 920, 1058, 2123
BseMI GCAATG 3 cut(s) 303, 378, 1500
BseMII CTCAG 7 cut(s) 548, 1229, 2310, 2466, 2492, 2560, 2990
BseNI ACTGG 4 cut(s) 1633, 2039, 2668, 2882
BseRI GAGGAG 4 cut(s) 1116, 1935, 1938, 2797
BseXI GCAGC 5 cut(s) 1033, 1399, 1609, 1715, 2272
BseYI CCCAGC 1 cut(s) 2891
Bsh1236I CGCG 2 cut(s) 46, 136
Bsh1285I CGRYCG 1 cut(s) 1786
BshFI GGCC 6 cut(s) 145, 225, 488, 837, 2558, 3009
BsiEI CGRYCG 1 cut(s) 1786
BsiHKAI GWGCWC 1 cut(s) 1534
BsiHKCI CYCGRG 1 cut(s) 62
BsiSI CCGG 6 cut(s) 141, 146, 2041, 2110, 2813, 3010
BslFI GGGAC 2 cut(s) 41, 1075
BslI CCNNNNNNNGG 7 cut(s) 259, 275, 298, 593, 920, 1058, 2123
BsmAI GTCTC 4 cut(s) 1096, 2661, 2866, 2979
BsmFI GGGAC 2 cut(s) 41, 1075
BsnI GGCC 6 cut(s) 145, 225, 488, 837, 2558, 3009
BsoBI CYCGRG 1 cut(s) 62
Bsp1286I GDGCHC 2 cut(s) 265, 1534
Bsp19I CCATGG 2 cut(s) 1065, 1695
Bsp68I TCGCGA 1 cut(s) 136
BspACI CCGC 2 cut(s) 46, 59
BspANI GGCC 6 cut(s) 145, 225, 488, 837, 2558, 3009
BspCNI CTCAG 7 cut(s) 547, 1228, 2311, 2467, 2493, 2559, 2989
BspFNI CGCG 2 cut(s) 46, 136
BspHI TCATGA 1 cut(s) 2761
BspLI GGNNCC 9 cut(s) 28, 50, 57, 106, 836, 1063, 1324, 2039, 2709
BspMAI CTGCAG 1 cut(s) 2464
BspMI ACCTGC 1 cut(s) 747
BspPI GGATC 5 cut(s) 201, 1474, 1645, 2032, 2045
BspQI GCTCTTC 2 cut(s) 880, 2832
BsrDI GCAATG 3 cut(s) 303, 378, 1500
BsrFI RCCGGY 1 cut(s) 3009
BsrI ACTGG 4 cut(s) 1633, 2039, 2668, 2882
BssAI RCCGGY 1 cut(s) 3009
BssECI CCNNGG 5 cut(s) 204, 1065, 1164, 1695, 2777
BssNI GRCGYC 1 cut(s) 75
BssT1I CCWWGG 4 cut(s) 204, 1065, 1164, 1695
Bst2UI CCWGG 5 cut(s) 53, 1447, 2124, 2778, 3050
Bst4CI ACNGT 4 cut(s) 1090, 1460, 1784, 2178
Bst6I CTCTTC 4 cut(s) 880, 2157, 2547, 2832
BstACI GRCGYC 1 cut(s) 75
BstAPI GCANNNNNTGC 1 cut(s) 1009
BstBAI YACGTR 1 cut(s) 2645
BstC8I GCNNGC 6 cut(s) 390, 2066, 2464, 2560, 2938, 3011
BstDSI CCRYGG 2 cut(s) 1065, 1695
BstEII GGTNACC 1 cut(s) 2239
BstENI CCTNNNNNAGG 2 cut(s) 273, 918
BstF5I GGATG 6 cut(s) 307, 412, 2008, 2062, 2077, 2907
BstFNI CGCG 2 cut(s) 46, 136
BstMAI GTCTC 4 cut(s) 1096, 2661, 2866, 2979
BstMCI CGRYCG 1 cut(s) 1786
BstMWI GCNNNNNNNGC 4 cut(s) 142, 231, 984, 1009
BstNI CCWGG 5 cut(s) 53, 1447, 2124, 2778, 3050
BstNSI RCATGY 2 cut(s) 392, 1336
BstPI GGTNACC 1 cut(s) 2239
BstSCI CCNGG 6 cut(s) 51, 140, 1445, 2122, 2776, 3048
BstSFI CTRYAG 1 cut(s) 2460
BstSNI TACGTA 1 cut(s) 2645
BstUI CGCG 2 cut(s) 46, 136
BstV1I GCAGC 5 cut(s) 1033, 1399, 1609, 1715, 2272
BstV2I GAAGAC 4 cut(s) 14, 28, 106, 1230
BstX2I RGATCY 4 cut(s) 66, 193, 1479, 2037
BstXI CCANNNNNNTGG 1 cut(s) 1722
BstYI RGATCY 4 cut(s) 66, 193, 1479, 2037
Bsu36I CCTNAGG 1 cut(s) 2546
BsuI GTATCC 2 cut(s) 2295, 2442
BsuRI GGCC 6 cut(s) 145, 225, 488, 837, 2558, 3009
BtgI CCRYGG 2 cut(s) 1065, 1695
BtgZI GCGATG 1 cut(s) 148
BtrI CACGTC 1 cut(s) 160
BtsCI GGATG 6 cut(s) 307, 412, 2008, 2062, 2077, 2907
BtsI GCAGTG 2 cut(s) 488, 2388
BtsIMutI CAGTG 7 cut(s) 488, 542, 1532, 2032, 2388, 2661, 2875
BtuMI TCGCGA 1 cut(s) 136
BveI ACCTGC 1 cut(s) 747
Cac8I GCNNGC 6 cut(s) 390, 2066, 2464, 2560, 2938, 3011
CciI TCATGA 1 cut(s) 2761
Cfr10I RCCGGY 1 cut(s) 3009
Cfr13I GGNCC 9 cut(s) 55, 143, 224, 486, 835, 1062, 1712, 2270, 3007
CseI GACGC 2 cut(s) 83, 95
CsiI ACCWGGT 1 cut(s) 51
DraI TTTAAA 1 cut(s) 1947
DrdI GACNNNNNNGTC 1 cut(s) 158
DseDI GACNNNNNNGTC 1 cut(s) 158
Eam1104I CTCTTC 4 cut(s) 880, 2157, 2547, 2832
EarI CTCTTC 4 cut(s) 880, 2157, 2547, 2832
Eco105I TACGTA 1 cut(s) 2645
Eco130I CCWWGG 4 cut(s) 204, 1065, 1164, 1695
Eco24I GRGCYC 1 cut(s) 265
Eco32I GATATC 2 cut(s) 1897, 2457
Eco47I GGWCC 4 cut(s) 55, 1062, 1712, 2270
Eco57I CTGAAG 7 cut(s) 26, 1242, 1362, 1545, 1899, 2415, 2943
Eco81I CCTNAGG 1 cut(s) 2546
Eco88I CYCGRG 1 cut(s) 62
Eco91I GGTNACC 1 cut(s) 2239
EcoNI CCTNNNNNAGG 2 cut(s) 273, 918
EcoO65I GGTNACC 1 cut(s) 2239
EcoRI GAATTC 1 cut(s) 618
EcoRII CCWGG 5 cut(s) 51, 1445, 2122, 2776, 3048
EcoRV GATATC 2 cut(s) 1897, 2457
EcoT14I CCWWGG 4 cut(s) 204, 1065, 1164, 1695
EcoT38I GRGCYC 1 cut(s) 265
ErhI CCWWGG 4 cut(s) 204, 1065, 1164, 1695
FalI AAGNNNNNCTT 8 cut(s) 762, 794, 1168, 1200, 1173, 1205, 1576, 1608
FaqI GGGAC 2 cut(s) 41, 1075
FauI CCCGC 1 cut(s) 66
FauNDI CATATG 2 cut(s) 715, 2020
FbaI TGATCA 3 cut(s) 868, 1597, 2764
FblI GTMKAC 2 cut(s) 1786, 2620
Fnu4HI GCNGC 5 cut(s) 1047, 1413, 1623, 1704, 2286
FokI GGATG 6 cut(s) 314, 419, 2015, 2069, 2084, 2894
FriOI GRGCYC 1 cut(s) 265
Fsp4HI GCNGC 5 cut(s) 1047, 1413, 1623, 1704, 2286
FspBI CTAG 4 cut(s) 882, 1514, 1548, 1992
GluI GCNGC 5 cut(s) 1047, 1413, 1623, 1704, 2286
GsaI CCCAGC 1 cut(s) 2895
GsuI CTGGAG 1 cut(s) 2685
HaeIII GGCC 6 cut(s) 145, 225, 488, 837, 2558, 3009
HapII CCGG 6 cut(s) 141, 146, 2041, 2110, 2813, 3010
HgaI GACGC 2 cut(s) 83, 95
Hin1I GRCGYC 1 cut(s) 75
HincII GTYRAC 2 cut(s) 412, 1787
HindII GTYRAC 2 cut(s) 412, 1787
HindIII AAGCTT 2 cut(s) 650, 1182
HpaI GTTAAC 1 cut(s) 412
HpaII CCGG 6 cut(s) 141, 146, 2041, 2110, 2813, 3010
HphI GGTGA 8 cut(s) 347, 818, 1697, 1904, 1952, 2702, 2766, 2802
Hpy166II GTNNAC 9 cut(s) 282, 412, 721, 1730, 1787, 1960, 2262, 2418, 2621
Hpy8I GTNNAC 9 cut(s) 282, 412, 721, 1730, 1787, 1960, 2262, 2418, 2621
Hpy99I CGWCG 4 cut(s) 16, 19, 77, 89
HpyAV CCTTC 8 cut(s) 89, 797, 1386, 1520, 1602, 2230, 2578, 2928
HpyCH4III ACNGT 4 cut(s) 1090, 1460, 1784, 2178
HpyCH4IV ACGT 3 cut(s) 17, 159, 2644
HpyF10VI GCNNNNNNNGC 4 cut(s) 142, 231, 984, 1009
HpySE526I ACGT 3 cut(s) 17, 159, 2644
Hsp92I GRCGYC 1 cut(s) 75
KroI GCCGGC 1 cut(s) 3009
KroNI GCCGGC 1 cut(s) 3011
Ksp22I TGATCA 3 cut(s) 868, 1597, 2764
KspAI GTTAAC 1 cut(s) 412
LguI GCTCTTC 2 cut(s) 880, 2832
LmnI GCTCC 9 cut(s) 26, 104, 984, 1054, 1129, 1529, 2101, 2207, 2743
Lsp1109I GCAGC 5 cut(s) 1033, 1399, 1609, 1715, 2272
LweI GCATC 4 cut(s) 407, 559, 1785, 2836
MabI ACCWGGT 1 cut(s) 51
MaeI CTAG 4 cut(s) 882, 1514, 1548, 1992
MaeII ACGT 3 cut(s) 17, 159, 2644
MfeI CAATTG 1 cut(s) 1776
MflI RGATCY 4 cut(s) 66, 193, 1479, 2037
MhlI GDGCHC 2 cut(s) 265, 1534
MlyI GAGTC 5 cut(s) 563, 899, 1178, 2434, 2981
MmeI TCCRAC 4 cut(s) 1348, 1623, 1690, 2721
MroNI GCCGGC 1 cut(s) 3009
MroXI GAANNNNTTC 4 cut(s) 468, 676, 1375, 2136
MslI CAYNNNNRTG 6 cut(s) 555, 829, 1720, 2476, 2815, 2844
MspA1I CMGCKG 3 cut(s) 1046, 1706, 2318
MspI CCGG 6 cut(s) 141, 146, 2041, 2110, 2813, 3010
MspR9I CCNGG 6 cut(s) 53, 142, 1447, 2124, 2778, 3050
MunI CAATTG 1 cut(s) 1776
MvaI CCWGG 5 cut(s) 53, 1447, 2124, 2778, 3050
MvnI CGCG 2 cut(s) 46, 136
MwoI GCNNNNNNNGC 4 cut(s) 142, 231, 984, 1009
NaeI GCCGGC 1 cut(s) 3011
NciI CCSGG 1 cut(s) 142
NcoI CCATGG 2 cut(s) 1065, 1695
NdeI CATATG 2 cut(s) 715, 2020
NgoMIV GCCGGC 1 cut(s) 3009
NlaIV GGNNCC 9 cut(s) 28, 50, 57, 106, 836, 1063, 1324, 2039, 2709
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 8 cut(s) 335, 514, 806, 1685, 2030, 2081, 2386, 2772
NruI TCGCGA 1 cut(s) 136
NspI RCATGY 2 cut(s) 392, 1336
OliI CACNNNNGTG 1 cut(s) 2815
PaeI GCATGC 1 cut(s) 392
PagI TCATGA 1 cut(s) 2761
PciI ACATGT 1 cut(s) 1332
PciSI GCTCTTC 2 cut(s) 880, 2832
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 156, 171
PdiI GCCGGC 1 cut(s) 3011
PdmI GAANNNNTTC 4 cut(s) 468, 676, 1375, 2136
PflFI GACNNNGTC 1 cut(s) 2971
PkrI GCNGC 5 cut(s) 1048, 1414, 1624, 1705, 2287
PleI GAGTC 5 cut(s) 563, 899, 1177, 2433, 2980
PpsI GAGTC 5 cut(s) 563, 899, 1177, 2433, 2980
Ppu21I YACGTR 1 cut(s) 2645
PscI ACATGT 1 cut(s) 1332
PshBI ATTAAT 1 cut(s) 522
Psp6I CCWGG 5 cut(s) 51, 1445, 2122, 2776, 3048
PspEI GGTNACC 1 cut(s) 2239
PspFI CCCAGC 1 cut(s) 2891
PspGI CCWGG 5 cut(s) 51, 1445, 2122, 2776, 3048
PspN4I GGNNCC 9 cut(s) 28, 50, 57, 106, 836, 1063, 1324, 2039, 2709
PspPI GGNCC 9 cut(s) 55, 143, 224, 486, 835, 1062, 1712, 2270, 3007
PstI CTGCAG 1 cut(s) 2464
PsuI RGATCY 4 cut(s) 66, 193, 1479, 2037
PsyI GACNNNGTC 1 cut(s) 2971
PvuII CAGCTG 3 cut(s) 1046, 1706, 2318
RruI TCGCGA 1 cut(s) 136
RseI CAYNNNNRTG 6 cut(s) 555, 829, 1720, 2476, 2815, 2844
SalI GTCGAC 1 cut(s) 1785
SapI GCTCTTC 2 cut(s) 880, 2832
SatI GCNGC 5 cut(s) 1047, 1413, 1623, 1704, 2286
Sau96I GGNCC 9 cut(s) 55, 143, 224, 486, 835, 1062, 1712, 2270, 3007
ScaI AGTACT 1 cut(s) 315
SchI GAGTC 5 cut(s) 563, 899, 1178, 2434, 2981
ScrFI CCNGG 6 cut(s) 53, 142, 1447, 2124, 2778, 3050
SduI GDGCHC 2 cut(s) 265, 1534
SexAI ACCWGGT 1 cut(s) 51
SfaNI GCATC 4 cut(s) 407, 559, 1785, 2836
SfcI CTRYAG 1 cut(s) 2460
SinI GGWCC 4 cut(s) 55, 1062, 1712, 2270
SmiMI CAYNNNNRTG 6 cut(s) 555, 829, 1720, 2476, 2815, 2844
SmlI CTYRAG 3 cut(s) 92, 564, 2700
SmoI CTYRAG 3 cut(s) 92, 564, 2700
SnaBI TACGTA 1 cut(s) 2645
SpeI ACTAGT 1 cut(s) 1991
SphI GCATGC 1 cut(s) 392
SsiI CCGC 2 cut(s) 46, 59
SspI AATATT 1 cut(s) 786
SspMI CTAG 4 cut(s) 882, 1514, 1548, 1992
StyD4I CCNGG 6 cut(s) 51, 140, 1445, 2122, 2776, 3048
StyI CCWWGG 4 cut(s) 204, 1065, 1164, 1695
TaaI ACNGT 4 cut(s) 1090, 1460, 1784, 2178
TaiI ACGT 3 cut(s) 20, 162, 2647
TaqI TCGA 4 cut(s) 72, 1786, 2401, 2870
TaqII GACCGA 1 cut(s) 2984
TatI WGTACW 6 cut(s) 313, 720, 1236, 1957, 2200, 2417
TscAI CASTG 7 cut(s) 488, 542, 1539, 2039, 2395, 2668, 2882
TseFI GTSAC 8 cut(s) 335, 514, 806, 1685, 2030, 2081, 2386, 2772
TseI GCWGC 5 cut(s) 1046, 1412, 1622, 1703, 2285
Tsp45I GTSAC 8 cut(s) 335, 514, 806, 1685, 2030, 2081, 2386, 2772
TspDTI ATGAA 8 cut(s) 28, 645, 783, 1418, 1694, 2175, 2460, 2750
TspRI CASTG 7 cut(s) 488, 542, 1539, 2039, 2395, 2668, 2882
Tth111I GACNNNGTC 1 cut(s) 2971
VpaK11BI GGWCC 4 cut(s) 55, 1062, 1712, 2270
VspI ATTAAT 1 cut(s) 522
XagI CCTNNNNNAGG 2 cut(s) 273, 918
XapI RAATTY 5 cut(s) 618, 1036, 1867, 2188, 2213
XbaI TCTAGA 1 cut(s) 881
XceI RCATGY 2 cut(s) 392, 1336
XmiI GTMKAC 2 cut(s) 1786, 2620
XmnI GAANNNNTTC 4 cut(s) 468, 676, 1375, 2136
XspI CTAG 4 cut(s) 882, 1514, 1548, 1992
ZrmI AGTACT 1 cut(s) 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.