Rh6DG376800

DNA topoisomerase 2-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0003647
Physical Location & Seq
Reverse (-)
57121018 .. 57128063
7046 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG376800.1

Sequence Viewer

Length: 2871 bp
ATGCTCCAAACGCCGCCGTTTAAGGGCGCCAATGTCTTCATGTCGCGGAAGCTGGTCCCGCCGGAGATTTTCGACGCGCTTCACGACGCTCTCAAGCTCAACGGCGCCAATGTCGTCCTCTGCTCCGATCCCTCGCGCACCGGCCCCGACGACTACCACGTCATCGCTTCCTCCGATCACCATTGGATGGTGTCAATGTACTTGCCTCTGGTTTTGAGGCAGATGAAAAGGTATTGCGCCTGCGCTTCATCCCTGTTTAATCAGGTTAAGATAAAGAACTTAGTAACATCAATGGGGGGAGTTTTACATACTAAAACATCTTTGGATGTTAGCTTTGTCATTGCGAAGAATGTCTTGGCTGCAAAATACAAGTGGGCTGTAAATACATTGAAGAAGCCAGTTCTTACTATTAATTGGTTATATCAATGCTGCAATGAACATCGCATTGTTCCTCAAGAATCCTTTAGGGTTCTTCCTGTTTCTGGTTTGACGATCTGTGTTACCAGAATTCCATCAGATGAACGGAAGAAGATTGAAAATCTTATCACAGAAAATGGTGGACATTATTCTGCTGAACTTACAAGGAAGTGCACACATTTGATTTGTGATATATCCTTTTATGAAGGTGATAAATACAAGGTTGCACGAATGTGGGGTCATATTTATATTGTAACTCGGAAATGGTTTGATCAATCGATTGCTAGAAGAGCTTGTCTCAGTGAAGAGTCCTTTCCAGTTCAAGGTGGTTCTCTATCTTCAAAGAAGATTGTAAAGGGTTGCTTTGCTTCACAAAATAGCCAAAGCAACTGTAGTGGGAAGTTGCAAGCTGTACCACCATCGGTGGTTGCAGATTCAAATTTTACAGCTGCTACTTGTGGTGGGATTGTGGATTCTGATCTAGAAGCTACTGTCTCACAAACCATGCTTCCAACATTTTCTTGTGCCCCTTTATCTTGTAAAGAGGGGGATATCAAAGTCCCTCCCTTGGAATCAAAATGTGAGGTGACCCTTGAAGATTGTGTTGCTGATGATTCTCAGTCTGAAGACGATGACCTGTACTTGTCAGAATGTAAAATATCACTTGTTGGCTTCGAAGCTTCTGAAATGCGTAGATTGGTTAATATTATTCGCAGAGGTGGGGGCTCCCGTTATATGTCATTCAATGACAGGTTGACACACATAGTAGTTGGAACTCCTTCTGAAATTGAAAAGAAGGAGGTAAGGAGATTTGCAGCTTTAGGTGTCATTCATGTGGTTAGAGCCACCTGGCTTGAAGATTGTGATCGTGAGAAGAAAGAGATACCAGTTCTCCAGAGGCACAGTGCCTGTGATATACTTCTCCCTAAAGGAGCACTGACAGGTACGAGTGGTATGATTCAAGGGAAAATTTCTACTATTCCTCAAAGGGTGCCTTCTGATCAGTTATGTGGTAATAGGAGTACGGCAACTGGAATAGATTCATTGGAGAAAAATAGAGAGGAGGTATCAGAAATAAATAGGAATGATGACAGGTCTGTGAAAGAAGCAGTTGGATCATTCGATAAGAATAAACTTCCTGTCATAAAGGATAAAAGTAAGGTCCAGTTACATGACAAAACAAGGGGTCAACAGAAGATACAACATGAATCAGGTGTTCAAAATGGCAAACCATCTTCTGTATTTAAGGGGAAATTTTTCCGCTTTTCAAATTCCTTTCCTGAAGACAGGAGAGGTGAAATTATTGAATGGGTAAATCAAGGGGGAGGATTGGTAATTGATGCTCATTTTAAACAGAAGGCTCACTTCACTATTGAGTGTCATGGTGTGATACCCAGATCTGTGGACACTACTCGAGCTACATATGTATCAAGTCACTGGATCCGGTCATGTTTGGAGGATGGATGCTTGCTGGATGTTAGTAATCACGTTCTCTATACTCCTCTTCCCTGCCGGACTCCGTTGCCTGGATTTGAAAGCTTTCGGTTTTCTGTTTCACAATATGAAGAGAAAGATAGACTGTTACTAAGAAATCTGTGTTTTACACTGGGAGCTAAATTTGTGGAGAAACTGAATAAGAAGGTTACCCATTTGTTATGCAAGTTTACCAGTGGAAGTAAGTATGAGGCTGCTTGTAAATGGGGAATACACCGAATTACCTCTGACTGGTTATATGAGTGCGTGAAGCAGAATAAAGTCATTGCCCTTGACCAATTTTATCCTAAAGAAGTTACTGCTGAAGATCGAGAGGCAGGGTTATGCACTACAAGTCAGTATCCTACACAAGATGTTCGAATGATATCTGTAGGCAATCCATCTCAATGTCCAAGTCAATCACAAGATCGGAGCTTCTCACCACCTCAAGCCATTGGTCGTAGAAATGACAATATCAGGGAAGAAGCCAAAGCATCAAGTTGCAATAAAAAGGCAAGGGTTTTGGAAGATGTTGACCAAAGCGGTCTTCTTTCTTCAGGGATAAGTTCAATTATTCCTTCCTATATAACTGGAGACAAGAAAGTGAACACTTTTGGTGAAGTATCCCAAGTTGTTCCTGATGTAGCTTCTGCTATTGAGGACTTGTTGGAGCAGACAACTAAGATTCATGATCAGAATTCACCAGAGAGTATTTTTGCATCGGATTGTGAATTGCTTGGTCAAGACCTGCCGGGTTCTCACTCCGTGGGTGGACTATCGAGACACTGGTTAAAGAGTGCTGGGAAAAAAGATGACATCAACAATTCTTCTGGAAAACAAACTGCTGGCTTGTATGATCAGTTTAGTGAAACACAGACCGATTCGCAGGTTGTTGGATATGAGGAAGATTTGTCAGGCCGGCAAATGCTTATAGACAGAGTTCGAACGCGAAGTAGTAGCAGGACTGCTTCAAGTTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000076 GO:0000785 GO:0001932 GO:0001934 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007049 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009893 GO:0009987 GO:0010556 GO:0010562 GO:0010604 GO:0016043 GO:0019219 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022402 GO:0022607 GO:0030174 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031570 GO:0032268 GO:0032270 GO:0033036 GO:0033135 GO:0033138 GO:0033260 GO:0033365 GO:0033554 GO:0033674 GO:0034502 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0035561 GO:0035563 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044786 GO:0045786 GO:0045859 GO:0045860 GO:0045937 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051098 GO:0051099 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051641 GO:0051716 GO:0051726 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070727 GO:0071163 GO:0071165 GO:0071168 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
BRCT BRCT_2 PTCB-BRCT

Protein Analysis

956

Amino Acids

106.25

Weight (kDa)

8.24

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT PF00533 159 - 233 2.4e-11 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 163 - 228 1.6e-20 twin BRCT domain
BRCT PF00533 353 - 427 2.4e-06 BRCA1 C Terminus (BRCT) domain
BRCT PF00533 650 - 720 1.5e-08 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 655 - 715 1.3e-17 twin BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
Acc36I ACCTGC 2 cut(s) 2646, 2767
AccB1I GGYRCC 3 cut(s) 26, 104, 1408
AccB7I CCANNNNNTGG 1 cut(s) 187
AccII CGCG 4 cut(s) 46, 77, 136, 2839
AciI CCGC 5 cut(s) 14, 46, 59, 1678, 2433
AclWI GGATC 4 cut(s) 122, 1540, 1852, 1865
AcsI RAATTY 7 cut(s) 507, 856, 1386, 1670, 1687, 2033, 2587
AcuI CTGAAG 4 cut(s) 1062, 1719, 2235, 2430
AcyI GRCGYC 2 cut(s) 27, 105
AdeI CACNNNGTG 1 cut(s) 2656
AfaI GTAC 5 cut(s) 200, 831, 1058, 1363, 1441
AfiI CCNNNNNNNGG 7 cut(s) 23, 187, 482, 740, 985, 1943, 2142
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 2 cut(s) 1265, 1942
AjuI GAANNNNNNNTTGG 4 cut(s) 338, 370, 2421, 2453
AleI CACNNNNGTG 1 cut(s) 649
Alw21I GWGCWC 2 cut(s) 593, 1354
Alw26I GTCTC 4 cut(s) 719, 916, 2478, 2665
Alw44I GTGCAC 1 cut(s) 589
AlwI GGATC 4 cut(s) 122, 1540, 1852, 1865
AlwNI CAGNNNCTG 1 cut(s) 1326
Ama87I CYCGRG 1 cut(s) 1830
AoxI GGCC 2 cut(s) 142, 2806
ApaLI GTGCAC 1 cut(s) 589
ApeKI GCWGC 5 cut(s) 359, 429, 866, 1232, 2105
ApoI RAATTY 7 cut(s) 507, 856, 1386, 1670, 1687, 2033, 2587
ArsI GACNNNNNNTTYG 2 cut(s) 640, 672
AseI ATTAAT 1 cut(s) 411
Asp700I GAANNNNTTC 4 cut(s) 1195, 1456, 1673, 1956
AspLEI GCGC 6 cut(s) 29, 79, 107, 138, 239, 245
AspS9I GGNCC 3 cut(s) 55, 143, 1579
AsuC2I CCSGG 1 cut(s) 2643
AsuHPI GGTGA 7 cut(s) 170, 638, 1015, 1724, 2322, 2519, 2583
AsuII TTCGAA 3 cut(s) 1092, 2269, 2833
AvaI CYCGRG 1 cut(s) 1830
AvaII GGWCC 2 cut(s) 55, 1579
BaeGI GKGCMC 2 cut(s) 593, 946
BaeI ACNNNNGTAYC 2 cut(s) 1827, 1860
BamHI GGATCC 1 cut(s) 1857
BanI GGYRCC 3 cut(s) 26, 104, 1408
BanII GRGCYC 1 cut(s) 1145
BbsI GAAGAC 4 cut(s) 28, 1050, 1707, 2429
Bbv12I GWGCWC 2 cut(s) 593, 1354
BbvI GCAGC 5 cut(s) 346, 416, 853, 1244, 2092
BccI CCATC 6 cut(s) 181, 520, 844, 1657, 1871, 2299
BceAI ACGGC 2 cut(s) 118, 1458
BciT130I CCWGG 2 cut(s) 1267, 1944
BciVI GTATCC 2 cut(s) 2262, 2524
BclI TGATCA 4 cut(s) 688, 1417, 2581, 2746
BcnI CCSGG 1 cut(s) 2643
BcoDI GTCTC 4 cut(s) 719, 916, 2478, 2665
BfaI CTAG 3 cut(s) 702, 899, 2869
BfmI CTRYAG 2 cut(s) 808, 2280
BfoI RGCGCY 2 cut(s) 30, 108
BfuAI ACCTGC 2 cut(s) 2646, 2767
BfuI GTATCC 2 cut(s) 2262, 2524
BglII AGATCT 1 cut(s) 1814
BisI GCNGC 6 cut(s) 14, 360, 430, 867, 1233, 2106
BlsI GCNGC 6 cut(s) 15, 361, 431, 868, 1234, 2107
Bme1390I CCNGG 3 cut(s) 1267, 1944, 2643
Bme18I GGWCC 2 cut(s) 55, 1579
BmeT110I CYCGRG 1 cut(s) 1830
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 3 cut(s) 55, 143, 1579
BmiI GGNNCC 7 cut(s) 28, 57, 106, 145, 1144, 1410, 1859
BmrFI CCNGG 3 cut(s) 1267, 1944, 2643
BmrI ACTGGG 1 cut(s) 2033
BmsI GCATC 4 cut(s) 1747, 1871, 2393, 2618
BmuI ACTGGG 1 cut(s) 2033
BpiI GAAGAC 4 cut(s) 28, 1050, 1707, 2429
BplI GAGNNNNNCTC 2 cut(s) 699, 731
BpmI CTGGAG 2 cut(s) 1295, 2502
Bpu14I TTCGAA 3 cut(s) 1092, 2269, 2833
BpuEI CTTGAG 3 cut(s) 77, 438, 2322
BpuMI CCSGG 1 cut(s) 2643
Bsa29I ATCGAT 1 cut(s) 695
BsaBI GATNNNNATC 2 cut(s) 894, 1281
BsaHI GRCGYC 2 cut(s) 27, 105
BsaJI CCNNGG 2 cut(s) 984, 2655
BsaWI WCCGGW 1 cut(s) 1860
BsaXI ACNNNNNCTCC 4 cut(s) 1293, 1323, 1734, 1764
Bsc4I CCNNNNNNNGG 7 cut(s) 23, 187, 482, 740, 985, 1943, 2142
Bse118I RCCGGY 2 cut(s) 140, 2808
Bse3DI GCAATG 3 cut(s) 339, 439, 2175
Bse8I GATNNNNATC 2 cut(s) 894, 1281
BseBI CCWGG 2 cut(s) 1267, 1944
BseCI ATCGAT 1 cut(s) 695
BseDI CCNNGG 2 cut(s) 984, 2655
BseGI GGATG 6 cut(s) 192, 248, 331, 1882, 1886, 1897
BseJI GATNNNNATC 2 cut(s) 894, 1281
BseLI CCNNNNNNNGG 7 cut(s) 23, 187, 482, 740, 985, 1943, 2142
BseMI GCAATG 3 cut(s) 339, 439, 2175
BseMII CTCAG 2 cut(s) 730, 1049
BseRI GAGGAG 2 cut(s) 1493, 1908
BseSI GKGCMC 2 cut(s) 593, 946
BseXI GCAGC 5 cut(s) 346, 416, 853, 1244, 2092
BseYI CCCAGC 1 cut(s) 2690
Bsh1236I CGCG 4 cut(s) 46, 77, 136, 2839
BshFI GGCC 2 cut(s) 144, 2808
BshNI GGYRCC 3 cut(s) 26, 104, 1408
BshVI ATCGAT 1 cut(s) 695
BsiHKAI GWGCWC 2 cut(s) 593, 1354
BsiHKCI CYCGRG 1 cut(s) 1830
BsiSI CCGG 6 cut(s) 62, 141, 1861, 1930, 2642, 2809
BslFI GGGAC 2 cut(s) 41, 962
BslI CCNNNNNNNGG 7 cut(s) 23, 187, 482, 740, 985, 1943, 2142
BsmAI GTCTC 4 cut(s) 719, 916, 2478, 2665
BsmFI GGGAC 2 cut(s) 41, 962
BsnI GGCC 2 cut(s) 144, 2808
BsoBI CYCGRG 1 cut(s) 1830
Bsp119I TTCGAA 3 cut(s) 1092, 2269, 2833
Bsp1286I GDGCHC 4 cut(s) 593, 946, 1145, 1354
BspACI CCGC 5 cut(s) 14, 46, 59, 1678, 2433
BspANI GGCC 2 cut(s) 144, 2808
BspCNI CTCAG 2 cut(s) 729, 1048
BspDI ATCGAT 1 cut(s) 695
BspFNI CGCG 4 cut(s) 46, 77, 136, 2839
BspHI TCATGA 1 cut(s) 2578
BspLI GGNNCC 7 cut(s) 28, 57, 106, 145, 1144, 1410, 1859
BspMI ACCTGC 2 cut(s) 2646, 2767
BspPI GGATC 4 cut(s) 122, 1540, 1852, 1865
BspQI GCTCTTC 1 cut(s) 700
BspT104I TTCGAA 3 cut(s) 1092, 2269, 2833
BspT107I GGYRCC 3 cut(s) 26, 104, 1408
BsrDI GCAATG 3 cut(s) 339, 439, 2175
BsrFI RCCGGY 2 cut(s) 140, 2808
BssAI RCCGGY 2 cut(s) 140, 2808
BssECI CCNNGG 2 cut(s) 984, 2655
BssNI GRCGYC 2 cut(s) 27, 105
BssT1I CCWWGG 1 cut(s) 984
Bst2UI CCWGG 2 cut(s) 1267, 1944
Bst4CI ACNGT 4 cut(s) 809, 910, 1322, 1998
Bst6I CTCTTC 4 cut(s) 700, 717, 1926, 1977
BstACI GRCGYC 2 cut(s) 27, 105
BstBI TTCGAA 3 cut(s) 1092, 2269, 2833
BstC8I GCNNGC 5 cut(s) 241, 825, 1886, 2737, 2810
BstDEI CTNAG 5 cut(s) 280, 716, 1035, 2003, 2571
BstDSI CCRYGG 1 cut(s) 2655
BstEII GGTNACC 2 cut(s) 1003, 2059
BstF5I GGATG 6 cut(s) 192, 248, 331, 1882, 1886, 1897
BstFNI CGCG 4 cut(s) 46, 77, 136, 2839
BstH2I RGCGCY 2 cut(s) 30, 108
BstHHI GCGC 6 cut(s) 29, 79, 107, 138, 239, 245
BstMAI GTCTC 4 cut(s) 719, 916, 2478, 2665
BstMWI GCNNNNNNNGC 3 cut(s) 10, 58, 707
BstNI CCWGG 2 cut(s) 1267, 1944
BstPI GGTNACC 2 cut(s) 1003, 2059
BstSCI CCNGG 3 cut(s) 1265, 1942, 2641
BstSFI CTRYAG 2 cut(s) 808, 2280
BstSLI GKGCMC 2 cut(s) 593, 946
BstUI CGCG 4 cut(s) 46, 77, 136, 2839
BstV1I GCAGC 5 cut(s) 346, 416, 853, 1244, 2092
BstV2I GAAGAC 4 cut(s) 28, 1050, 1707, 2429
BstX2I RGATCY 2 cut(s) 1814, 1857
BstXI CCANNNNNNTGG 1 cut(s) 1819
BstYI RGATCY 2 cut(s) 1814, 1857
Bsu15I ATCGAT 1 cut(s) 695
BsuI GTATCC 2 cut(s) 2262, 2524
BsuRI GGCC 2 cut(s) 144, 2808
BsuTUI ATCGAT 1 cut(s) 695
BtgI CCRYGG 1 cut(s) 2655
BtgZI GCGATG 2 cut(s) 148, 425
BtrI CACGTC 1 cut(s) 160
BtsCI GGATG 6 cut(s) 192, 248, 331, 1882, 1886, 1897
BtsIMutI CAGTG 7 cut(s) 724, 1327, 1352, 1852, 2021, 2092, 2674
BveI ACCTGC 2 cut(s) 2646, 2767
Cac8I GCNNGC 5 cut(s) 241, 825, 1886, 2737, 2810
CaiI CAGNNNCTG 1 cut(s) 1326
CciI TCATGA 1 cut(s) 2578
CfoI GCGC 6 cut(s) 29, 79, 107, 138, 239, 245
Cfr10I RCCGGY 2 cut(s) 140, 2808
Cfr13I GGNCC 3 cut(s) 55, 143, 1579
ClaI ATCGAT 1 cut(s) 695
CseI GACGC 2 cut(s) 83, 95
Csp6I GTAC 5 cut(s) 199, 830, 1057, 1362, 1440
CspCI CAANNNNNGTGG 4 cut(s) 793, 828, 1252, 1287
CviAII CATG 8 cut(s) 40, 922, 1250, 1589, 1622, 1799, 1866, 2579
CviQI GTAC 5 cut(s) 199, 830, 1057, 1362, 1440
DdeI CTNAG 5 cut(s) 280, 716, 1035, 2003, 2571
DinI GGCGCC 2 cut(s) 28, 106
DraI TTTAAA 1 cut(s) 1768
DraIII CACNNNGTG 1 cut(s) 2656
DrdI GACNNNNNNGTC 1 cut(s) 158
DseDI GACNNNNNNGTC 1 cut(s) 158
Eam1104I CTCTTC 4 cut(s) 700, 717, 1926, 1977
EarI CTCTTC 4 cut(s) 700, 717, 1926, 1977
Eco130I CCWWGG 1 cut(s) 984
Eco24I GRGCYC 1 cut(s) 1145
Eco32I GATATC 2 cut(s) 970, 2277
Eco47I GGWCC 2 cut(s) 55, 1579
Eco57I CTGAAG 4 cut(s) 1062, 1719, 2235, 2430
Eco88I CYCGRG 1 cut(s) 1830
Eco91I GGTNACC 2 cut(s) 1003, 2059
EcoO65I GGTNACC 2 cut(s) 1003, 2059
EcoRI GAATTC 2 cut(s) 507, 2587
EcoRII CCWGG 2 cut(s) 1265, 1942
EcoRV GATATC 2 cut(s) 970, 2277
EcoT14I CCWWGG 1 cut(s) 984
EcoT38I GRGCYC 1 cut(s) 1145
EgeI GGCGCC 2 cut(s) 28, 106
EheI GGCGCC 2 cut(s) 28, 106
ErhI CCWWGG 1 cut(s) 984
FaeI CATG 8 cut(s) 43, 925, 1253, 1592, 1625, 1802, 1869, 2582
FalI AAGNNNNNCTT 8 cut(s) 338, 370, 764, 796, 1396, 1428, 1766, 1798
FaqI GGGAC 2 cut(s) 41, 962
FatI CATG 8 cut(s) 39, 921, 1249, 1588, 1621, 1798, 1865, 2578
FauI CCCGC 1 cut(s) 66
FauNDI CATATG 1 cut(s) 1840
FbaI TGATCA 4 cut(s) 688, 1417, 2581, 2746
Fnu4HI GCNGC 6 cut(s) 14, 360, 430, 867, 1233, 2106
FokI GGATG 6 cut(s) 199, 235, 338, 1889, 1893, 1904
FriOI GRGCYC 1 cut(s) 1145
Fsp4HI GCNGC 6 cut(s) 14, 360, 430, 867, 1233, 2106
FspBI CTAG 3 cut(s) 702, 899, 2869
GlaI GCGC 6 cut(s) 28, 78, 106, 137, 238, 244
GluI GCNGC 6 cut(s) 14, 360, 430, 867, 1233, 2106
GsaI CCCAGC 1 cut(s) 2694
GsuI CTGGAG 2 cut(s) 1295, 2502
HaeII RGCGCY 2 cut(s) 30, 108
HaeIII GGCC 2 cut(s) 144, 2808
HapII CCGG 6 cut(s) 62, 141, 1861, 1930, 2642, 2809
HgaI GACGC 2 cut(s) 83, 95
HhaI GCGC 6 cut(s) 29, 79, 107, 138, 239, 245
Hin1I GRCGYC 2 cut(s) 27, 105
Hin1II CATG 8 cut(s) 43, 925, 1253, 1592, 1625, 1802, 1869, 2582
Hin6I GCGC 6 cut(s) 27, 77, 105, 136, 237, 243
HinP1I GCGC 6 cut(s) 27, 77, 105, 136, 237, 243
HincII GTYRAC 3 cut(s) 1173, 1607, 2425
HindII GTYRAC 3 cut(s) 1173, 1607, 2425
HindIII AAGCTT 2 cut(s) 1095, 1954
HpaII CCGG 6 cut(s) 62, 141, 1861, 1930, 2642, 2809
HphI GGTGA 7 cut(s) 170, 638, 1015, 1724, 2322, 2519, 2583
Hpy166II GTNNAC 9 cut(s) 560, 591, 1173, 1607, 1822, 2082, 2425, 2497, 2663
Hpy8I GTNNAC 9 cut(s) 560, 591, 1173, 1607, 1822, 2082, 2425, 2497, 2663
Hpy99I CGWCG 3 cut(s) 77, 89, 152
HpyAV CCTTC 7 cut(s) 617, 1206, 1207, 1422, 1768, 2050, 2478
HpyCH4III ACNGT 4 cut(s) 809, 910, 1322, 1998
HpyCH4IV ACGT 2 cut(s) 159, 1905
HpyF10VI GCNNNNNNNGC 3 cut(s) 10, 58, 707
HpyF3I CTNAG 5 cut(s) 280, 716, 1035, 2003, 2571
HpySE526I ACGT 2 cut(s) 159, 1905
Hsp92I GRCGYC 2 cut(s) 27, 105
Hsp92II CATG 8 cut(s) 43, 925, 1253, 1592, 1625, 1802, 1869, 2582
HspAI GCGC 6 cut(s) 27, 77, 105, 136, 237, 243
KasI GGCGCC 2 cut(s) 26, 104
KroI GCCGGC 1 cut(s) 2808
KroNI GCCGGC 1 cut(s) 2810
Ksp22I TGATCA 4 cut(s) 688, 1417, 2581, 2746
LguI GCTCTTC 1 cut(s) 700
LmnI GCTCC 7 cut(s) 9, 128, 1148, 1349, 2027, 2322, 2560
Lsp1109I GCAGC 5 cut(s) 346, 416, 853, 1244, 2092
LweI GCATC 4 cut(s) 1747, 1871, 2393, 2618
MaeI CTAG 3 cut(s) 702, 899, 2869
MaeII ACGT 2 cut(s) 159, 1905
MaeIII GTNAC 9 cut(s) 283, 499, 670, 1003, 1584, 1850, 1998, 2059, 2206
MflI RGATCY 2 cut(s) 1814, 1857
MhlI GDGCHC 4 cut(s) 593, 946, 1145, 1354
Mly113I GGCGCC 2 cut(s) 27, 105
MlyI GAGTC 2 cut(s) 734, 1927
MmeI TCCRAC 5 cut(s) 953, 1168, 1510, 2538, 2764
MroNI GCCGGC 1 cut(s) 2808
MroXI GAANNNNTTC 4 cut(s) 1195, 1456, 1673, 1956
MseI TTAA 8 cut(s) 21, 258, 267, 411, 1119, 1662, 1767, 2681
MslI CAYNNNNRTG 3 cut(s) 649, 1250, 2296
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 6 cut(s) 62, 141, 1861, 1930, 2642, 2809
MspR9I CCNGG 3 cut(s) 1267, 1944, 2643
MvaI CCWGG 2 cut(s) 1267, 1944
MvnI CGCG 4 cut(s) 46, 77, 136, 2839
MwoI GCNNNNNNNGC 3 cut(s) 10, 58, 707
NaeI GCCGGC 1 cut(s) 2810
NarI GGCGCC 2 cut(s) 27, 105
NciI CCSGG 1 cut(s) 2643
NdeI CATATG 1 cut(s) 1840
NgoMIV GCCGGC 1 cut(s) 2808
NlaIII CATG 8 cut(s) 43, 925, 1253, 1592, 1625, 1802, 1869, 2582
NlaIV GGNNCC 7 cut(s) 28, 57, 106, 145, 1144, 1410, 1859
NmuCI GTSAC 2 cut(s) 1003, 1850
NspV TTCGAA 3 cut(s) 1092, 2269, 2833
OliI CACNNNNGTG 1 cut(s) 649
PaeR7I CTCGAG 1 cut(s) 1830
PagI TCATGA 1 cut(s) 2578
PciSI GCTCTTC 1 cut(s) 700
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 156, 171
PdiI GCCGGC 1 cut(s) 2810
PdmI GAANNNNTTC 4 cut(s) 1195, 1456, 1673, 1956
PflMI CCANNNNNTGG 1 cut(s) 187
PkrI GCNGC 6 cut(s) 15, 361, 431, 868, 1234, 2107
PleI GAGTC 2 cut(s) 733, 1927
PluTI GGCGCC 2 cut(s) 30, 108
PpsI GAGTC 2 cut(s) 733, 1927
PshBI ATTAAT 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 1265, 1942
PspEI GGTNACC 2 cut(s) 1003, 2059
PspFI CCCAGC 1 cut(s) 2690
PspGI CCWGG 2 cut(s) 1265, 1942
PspN4I GGNNCC 7 cut(s) 28, 57, 106, 145, 1144, 1410, 1859
PspPI GGNCC 3 cut(s) 55, 143, 1579
PspXI VCTCGAGB 1 cut(s) 1830
PstNI CAGNNNCTG 1 cut(s) 1326
PsuI RGATCY 2 cut(s) 1814, 1857
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 5 cut(s) 200, 831, 1058, 1363, 1441
RsaNI GTAC 5 cut(s) 199, 830, 1057, 1362, 1440
RseI CAYNNNNRTG 3 cut(s) 649, 1250, 2296
SapI GCTCTTC 1 cut(s) 700
SaqAI TTAA 8 cut(s) 21, 258, 267, 411, 1119, 1662, 1767, 2681
SatI GCNGC 6 cut(s) 14, 360, 430, 867, 1233, 2106
Sau96I GGNCC 3 cut(s) 55, 143, 1579
SchI GAGTC 2 cut(s) 734, 1927
ScrFI CCNGG 3 cut(s) 1267, 1944, 2643
SduI GDGCHC 4 cut(s) 593, 946, 1145, 1354
SfaNI GCATC 4 cut(s) 1747, 1871, 2393, 2618
SfcI CTRYAG 2 cut(s) 808, 2280
SfoI GGCGCC 2 cut(s) 28, 106
Sfr274I CTCGAG 1 cut(s) 1830
SfuI TTCGAA 3 cut(s) 1092, 2269, 2833
SinI GGWCC 2 cut(s) 55, 1579
SlaI CTCGAG 1 cut(s) 1830
SmiMI CAYNNNNRTG 3 cut(s) 649, 1250, 2296
SmlI CTYRAG 4 cut(s) 92, 453, 1830, 2337
SmoI CTYRAG 4 cut(s) 92, 453, 1830, 2337
SsiI CCGC 5 cut(s) 14, 46, 59, 1678, 2433
SspDI GGCGCC 2 cut(s) 26, 104
SspI AATATT 1 cut(s) 1123
SspMI CTAG 3 cut(s) 702, 899, 2869
StyD4I CCNGG 3 cut(s) 1265, 1942, 2641
StyI CCWWGG 1 cut(s) 984
TaaI ACNGT 4 cut(s) 809, 910, 1322, 1998
TaiI ACGT 2 cut(s) 162, 1908
TaqI TCGA 9 cut(s) 72, 695, 1092, 1539, 1831, 2221, 2269, 2669, 2833
TaqII GACCGA 1 cut(s) 2783
TatI WGTACW 2 cut(s) 198, 1056
TauI GCSGC 1 cut(s) 16
Tru1I TTAA 8 cut(s) 21, 258, 267, 411, 1119, 1662, 1767, 2681
Tru9I TTAA 8 cut(s) 21, 258, 267, 411, 1119, 1662, 1767, 2681
TscAI CASTG 7 cut(s) 724, 1327, 1359, 1859, 2028, 2092, 2681
TseFI GTSAC 2 cut(s) 1003, 1850
TseI GCWGC 5 cut(s) 359, 429, 866, 1232, 2105
Tsp45I GTSAC 2 cut(s) 1003, 1850
TspGWI ACGGA 3 cut(s) 538, 1926, 2644
TspRI CASTG 7 cut(s) 724, 1327, 1359, 1859, 2028, 2092, 2681
Van91I CCANNNNNTGG 1 cut(s) 187
VneI GTGCAC 1 cut(s) 589
VpaK11BI GGWCC 2 cut(s) 55, 1579
VspI ATTAAT 1 cut(s) 411
XapI RAATTY 7 cut(s) 507, 856, 1386, 1670, 1687, 2033, 2587
XbaI TCTAGA 1 cut(s) 898
XhoI CTCGAG 1 cut(s) 1830
XmnI GAANNNNTTC 4 cut(s) 1195, 1456, 1673, 1956
XspI CTAG 3 cut(s) 702, 899, 2869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.