RLG00000011670

DNA topoisomerase 2-binding protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Forward (+)
11554715 .. 11561734
7020 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011670

Sequence Viewer

Length: 3135 bp
ATGCTCCAAACGCCGCCGTTTAAGGGCGCCAATGTCTTCATGTCGCGGAAGCTGGTCCCGCCGGAGATTTTCGACGCGCTTCACGACGCTCTCAAGCTCAACGGCGCCAATGTCGTCCTCTGCTCCGATCCCTCGCGCACCGGCCCCGACGACTACCACGTCATCGCTTCCTCCGATCACGTAATCAACTCCACCCCTCTCTCAATTTCTCATATTTCGCTTCCACCTTCACTTGTTTGGTCTTTGGGAAATAGTGCTGATACCTGGGCATGTGTTTCTGATGGTTGGACAGGTCCTCAATGCGTGTTTTCTTGTGCGAACGAGCATAGGTCGCTGCCTAAACAAAATTTTACTTGTTGCCTAGCATTGGATGGTGTCAATGTACTTGCCTCTGGTTTTGAGGCAGATGAAAAGGTTAAGATAAATAACTTAGTAACATCAATGGGGGGAGTTTTACATACTAAAACATCTTTGGATGTTAGCTTTGTCATTGTGAAGAATGTCTTGGCTGCAAAATACAAGTGGGCTGTAAATACATTGAAGAAGCCAGTTCTTACTATTAATTGGTTATATCAATGCTGCAATGAACATCGCATTGTTCCTCAAGAATCCTTTAGGGTTCTTCCTGTTTCTGGTTTGACGATCTGTGTTACCAGAATTCCATCAGATGAACGGAAGAAGATTGAAAATCTTATCATAGAAAATGGTGGACATTATTCTGCTGAACTTACAAGGAATTTTTGTCAGTTCTTCGTGCATGTTATTATTATTGCAATTCCATTTAGGAACATGTTTCGATCTTGGTCTGCATCAGCATTGACTTTCAAACTTAATGTGTTATTTAAGTCTTCCTGCATTGTTTTTCTTGACTGCTTGCACGCTCCAGAAGGTGATAAATACAAGGTTGCACGAATGTGGGGTCATATTTATATTGTAACTCGGAAATGGTTTGATCAATCGATTGCTAGAAGAGCTTGTCTCAGTGAAGAGTCCTTTCCAGTTCAAGGTGGTTCTCTATCTTCAAAGAAGATTGTAAAGGGTTGCTTTGCTTCACAAAATAGCCAAAGCAACTGTAGTGGGAAGTTGCAAGCTGTACCACCATCGGTGGTTGCAGATTCAAATTTTACAGCTGCTACTTGTGGTGGGATTGTGGATTCTGATTTAGAAGCTACTGTCTCACAAACCATGCTTCCAACATTTTCTTGTGCCCCTTTATCTTGTAAAGAGGGGGATATCAAAGTCCCTCCCTTGGAATCAAAATGTGAGGTGACCCTTGAAGATTGTGTTGCTGATGATTCTCAGTCTGAAGACAATGACCTGTACTTGTCAGAATGTAAAATATCACTTGTTGGCTTCGAAGCTTCTGAAATGCGTAGATTGGTTAATATTATTCGCAGAGGTGGGGGCTCCCGTTATATGTCATTCAATGACAGGTTGACACACATAGTAGTTGGAACTCCTTCTGAAATTGAAAAGAAGGAGGTAAGGGGATTTGCAGCTTTAGGTGTCATTCATGTGGTTAGAGCCACATGGCTTGAAGATTGTGATCGTGAGAAGAAAGAGATACCAGTTCTCCAGAGGCACAGTGCCTGTGATATACTTCTTCCTAAAGGAGCACTGACAGGTACGAGTGGTATGATTCAAGGGAAAATTTCTACTATTCCTCAGAGGGTGCCTTCTGATCAGTTATGTGGTAATAGGAGTACGGCAACTGGAATAGATTCATTAGAGAAAAATAGAGAGGAGGTGTCAGAAATAAATAGGAACGATGACAGGTCTGTGAAAGAAGCAGTTGGATCATTCAATAAGAATAAACTTCCTGTCATAAAGGATAAAAGTAAGGTCCAGTTACATGACAAAACAAGGGGTCAACAGAAGATACAACATGAATCAGGTGTTCAAAATGGCAAACCATCTTCTGTATTTAAGGGGAAATTTTTCCGCTTTTCAAATTCCTTTCCTGAAGACAGGAGAGGTGAAATTATTGAATGGGTAAATCAAGGGGGAGGATTGGTAATTGATGCTCATTTTAAACAGAAGGCTCACTTCACTATTGAGTGTCATGGTGTGATACCCAGATCTGTGGACACTACTCGAACTACATATGTATCAAGTCACTGGATCCGGTCATGTTTGGAGGATGGATGCTTGCTGGATGTTAGTAATCACATTCTCTATACTCCTCTTCCCTGCCGGACTCCGTTGCCTGGATTTGAAAGCTTTCGGTTTTCTGTTTCACAATATGAAGAGAAAGATAGACTGTTACTAAGAAATCTGTGTTTTACACTGGGAGCTAAATTTGTAGAAAAACTGAATAAGAAGGTTACCCATTTGTTATGCAAGTTTACCAGTGGAAGTAAGTATGAGGCTGCTTGTAAATGGGGAATACACCGAATTACCTGTGACTGGTTATATGAGTGCGTGAAGCAGAATAAAGTCATTGCTCTTGACCAATTTTATCCTAAAGAAGTTACTGCTGAAGATCGAGAGGCAGGGTTATGCACTACAAGTCAGTATCCTACACAAGATGTTCGAATGACATCTGTAGGCAATCCATCTCAATGTCCAAGTCAATCACAAGATCGGAGCTTCTCACCACCTCAAGCCATTGGTCGTAGAAATGACAATATCAGGGAAGAAGCCAAAGCATCAAGTTGCAATAAAAAGGCAAGGGTTTTGGAAGATGTTGACCAAAGCGGTCTTCCTTCTTCAGGGACAAGTTCAAGCATTCCTTCCTATACAACTGGAGACAAGAAAGTGAACACTTTTGGTGAAGTATCCCAAGTTGTTCCTGATGTAGCTTCTGCTATTGAGGACTTGTTGGAGCAGACAACTAAGATTCATGATCAGAATTCACCAGAGAGTATTTTTGCATCGGATTGTGAATTGCTTGGTCAAGACCTGCCGGGTTCTCACTCCGTGGGTGGACTATCGAGACACTGGTTAAAGAGTGCTGGGAAAAAAGATGACATCAACAATCCTTCTGGAAAACAGACTGCTGGCTTGTATGATCAGTTTAGTGAAACACAGACCGATTCTCAGGTTGTTGGATATGAGGAAGATTTGTCAGGCCGGCAAATGCTTATAGACAGAGTTCGAACGCGAAGTAGTAGTAGGACTGCTTCAAGTTCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1045

Amino Acids

115.44

Weight (kDa)

7.78

Isoelectric Point (pI)

49.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTCB-BRCT PF12738 213 - 246 9.8e-06 twin BRCT domain
BRCT PF00533 440 - 515 4.8e-06 BRCA1 C Terminus (BRCT) domain
BRCT PF00533 738 - 808 9.8e-08 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 743 - 803 4.1e-18 twin BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 158
Acc36I ACCTGC 1 cut(s) 2910
AccB1I GGYRCC 3 cut(s) 26, 104, 1672
AccII CGCG 4 cut(s) 46, 77, 136, 3103
AciI CCGC 5 cut(s) 14, 46, 59, 1942, 2697
AclWI GGATC 4 cut(s) 122, 1804, 2116, 2129
AcsI RAATTY 9 cut(s) 346, 657, 736, 1120, 1650, 1934, 1951, 2297, 2851
AcuI CTGAAG 4 cut(s) 1326, 1983, 2499, 2694
AcyI GRCGYC 2 cut(s) 27, 105
AdeI CACNNNGTG 1 cut(s) 2920
AfaI GTAC 5 cut(s) 384, 1095, 1322, 1627, 1705
AfiI CCNNNNNNNGG 8 cut(s) 23, 367, 632, 1004, 1249, 2207, 2406, 2711
AflIII ACRYGT 1 cut(s) 789
AjiI CACGTC 1 cut(s) 160
AjnI CCWGG 2 cut(s) 263, 2206
AjuI GAANNNNNNNTTGG 4 cut(s) 488, 520, 2685, 2717
AleI CACNNNNGTG 1 cut(s) 913
Alw21I GWGCWC 1 cut(s) 1618
Alw26I GTCTC 4 cut(s) 983, 1180, 2742, 2929
AlwI GGATC 4 cut(s) 122, 1804, 2116, 2129
AlwNI CAGNNNCTG 1 cut(s) 1590
AoxI GGCC 2 cut(s) 142, 3070
ApeKI GCWGC 6 cut(s) 334, 509, 579, 1130, 1496, 2369
ApoI RAATTY 9 cut(s) 346, 657, 736, 1120, 1650, 1934, 1951, 2297, 2851
ArsI GACNNNNNNTTYG 2 cut(s) 904, 936
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 4 cut(s) 1459, 1720, 1937, 2220
AspLEI GCGC 4 cut(s) 29, 79, 107, 138
AspS9I GGNCC 4 cut(s) 55, 143, 293, 1843
AsuC2I CCSGG 1 cut(s) 2907
AsuHPI GGTGA 6 cut(s) 902, 1279, 1988, 2586, 2783, 2847
AsuII TTCGAA 3 cut(s) 1356, 2533, 3097
AvaII GGWCC 3 cut(s) 55, 293, 1843
BaeGI GKGCMC 1 cut(s) 1210
BaeI ACNNNNGTAYC 2 cut(s) 2091, 2124
BamHI GGATCC 1 cut(s) 2121
BanI GGYRCC 3 cut(s) 26, 104, 1672
BanII GRGCYC 1 cut(s) 1409
BarI GAAGNNNNNNTAC 1 cut(s) 3106
BbsI GAAGAC 5 cut(s) 28, 840, 1314, 1971, 2693
Bbv12I GWGCWC 1 cut(s) 1618
BbvI GCAGC 6 cut(s) 321, 496, 566, 1117, 1508, 2356
BccI CCATC 7 cut(s) 275, 365, 670, 1108, 1921, 2135, 2563
BceAI ACGGC 2 cut(s) 118, 1722
BciT130I CCWGG 2 cut(s) 265, 2208
BciVI GTATCC 2 cut(s) 2526, 2788
BclI TGATCA 4 cut(s) 952, 1681, 2845, 3010
BcnI CCSGG 1 cut(s) 2907
BcoDI GTCTC 4 cut(s) 983, 1180, 2742, 2929
BfaI CTAG 3 cut(s) 362, 966, 3133
BfmI CTRYAG 2 cut(s) 1072, 2544
BfoI RGCGCY 2 cut(s) 30, 108
BfuAI ACCTGC 1 cut(s) 2910
BfuI GTATCC 2 cut(s) 2526, 2788
BglII AGATCT 1 cut(s) 2078
BisI GCNGC 7 cut(s) 14, 335, 510, 580, 1131, 1497, 2370
BlsI GCNGC 7 cut(s) 15, 336, 511, 581, 1132, 1498, 2371
Bme1390I CCNGG 3 cut(s) 265, 2208, 2907
Bme18I GGWCC 3 cut(s) 55, 293, 1843
BmgBI CACGTC 1 cut(s) 160
BmgT120I GGNCC 4 cut(s) 55, 143, 293, 1843
BmiI GGNNCC 7 cut(s) 28, 57, 106, 145, 1408, 1674, 2123
BmrFI CCNGG 3 cut(s) 265, 2208, 2907
BmrI ACTGGG 1 cut(s) 2297
BmsI GCATC 5 cut(s) 818, 2011, 2135, 2657, 2882
BmuI ACTGGG 1 cut(s) 2297
BpiI GAAGAC 5 cut(s) 28, 840, 1314, 1971, 2693
BplI GAGNNNNNCTC 2 cut(s) 963, 995
BpmI CTGGAG 3 cut(s) 867, 1559, 2766
Bpu14I TTCGAA 3 cut(s) 1356, 2533, 3097
BpuEI CTTGAG 3 cut(s) 77, 588, 2586
BpuMI CCSGG 1 cut(s) 2907
Bsa29I ATCGAT 1 cut(s) 959
BsaAI YACGTR 1 cut(s) 181
BsaBI GATNNNNATC 1 cut(s) 1545
BsaHI GRCGYC 2 cut(s) 27, 105
BsaJI CCNNGG 3 cut(s) 264, 1248, 2919
BsaWI WCCGGW 1 cut(s) 2124
BsaXI ACNNNNNCTCC 4 cut(s) 1557, 1587, 1998, 2028
Bsc4I CCNNNNNNNGG 8 cut(s) 23, 367, 632, 1004, 1249, 2207, 2406, 2711
Bse118I RCCGGY 2 cut(s) 140, 3072
Bse3DI GCAATG 2 cut(s) 589, 2439
Bse8I GATNNNNATC 1 cut(s) 1545
BseBI CCWGG 2 cut(s) 265, 2208
BseCI ATCGAT 1 cut(s) 959
BseDI CCNNGG 3 cut(s) 264, 1248, 2919
BseGI GGATG 5 cut(s) 376, 481, 2146, 2150, 2161
BseJI GATNNNNATC 1 cut(s) 1545
BseLI CCNNNNNNNGG 8 cut(s) 23, 367, 632, 1004, 1249, 2207, 2406, 2711
BseMI GCAATG 2 cut(s) 589, 2439
BseMII CTCAG 4 cut(s) 994, 1313, 1679, 3053
BseRI GAGGAG 2 cut(s) 1757, 2172
BseSI GKGCMC 1 cut(s) 1210
BseXI GCAGC 6 cut(s) 321, 496, 566, 1117, 1508, 2356
BseYI CCCAGC 1 cut(s) 2954
Bsh1236I CGCG 4 cut(s) 46, 77, 136, 3103
BshFI GGCC 2 cut(s) 144, 3072
BshNI GGYRCC 3 cut(s) 26, 104, 1672
BshVI ATCGAT 1 cut(s) 959
BsiHKAI GWGCWC 1 cut(s) 1618
BsiSI CCGG 6 cut(s) 62, 141, 2125, 2194, 2906, 3073
BslFI GGGAC 3 cut(s) 41, 1226, 2728
BslI CCNNNNNNNGG 8 cut(s) 23, 367, 632, 1004, 1249, 2207, 2406, 2711
BsmAI GTCTC 4 cut(s) 983, 1180, 2742, 2929
BsmFI GGGAC 3 cut(s) 41, 1226, 2728
BsmI GAATGC 1 cut(s) 2727
BsnI GGCC 2 cut(s) 144, 3072
Bsp119I TTCGAA 3 cut(s) 1356, 2533, 3097
Bsp1286I GDGCHC 3 cut(s) 1210, 1409, 1618
BspACI CCGC 5 cut(s) 14, 46, 59, 1942, 2697
BspANI GGCC 2 cut(s) 144, 3072
BspCNI CTCAG 4 cut(s) 993, 1312, 1678, 3052
BspDI ATCGAT 1 cut(s) 959
BspFNI CGCG 4 cut(s) 46, 77, 136, 3103
BspHI TCATGA 1 cut(s) 2842
BspLI GGNNCC 7 cut(s) 28, 57, 106, 145, 1408, 1674, 2123
BspMI ACCTGC 1 cut(s) 2910
BspPI GGATC 4 cut(s) 122, 1804, 2116, 2129
BspQI GCTCTTC 1 cut(s) 964
BspT104I TTCGAA 3 cut(s) 1356, 2533, 3097
BspT107I GGYRCC 3 cut(s) 26, 104, 1672
BsrDI GCAATG 2 cut(s) 589, 2439
BsrFI RCCGGY 2 cut(s) 140, 3072
BssAI RCCGGY 2 cut(s) 140, 3072
BssECI CCNNGG 3 cut(s) 264, 1248, 2919
BssNI GRCGYC 2 cut(s) 27, 105
BssT1I CCWWGG 1 cut(s) 1248
Bst2UI CCWGG 2 cut(s) 265, 2208
Bst4CI ACNGT 4 cut(s) 1073, 1174, 1586, 2262
Bst6I CTCTTC 4 cut(s) 964, 981, 2190, 2241
BstACI GRCGYC 2 cut(s) 27, 105
BstBAI YACGTR 1 cut(s) 181
BstBI TTCGAA 3 cut(s) 1356, 2533, 3097
BstC8I GCNNGC 6 cut(s) 875, 879, 1089, 2150, 3001, 3074
BstDEI CTNAG 7 cut(s) 430, 980, 1299, 1665, 2267, 2835, 3039
BstDSI CCRYGG 1 cut(s) 2919
BstEII GGTNACC 2 cut(s) 1267, 2323
BstENI CCTNNNNNAGG 1 cut(s) 2709
BstF5I GGATG 5 cut(s) 376, 481, 2146, 2150, 2161
BstFNI CGCG 4 cut(s) 46, 77, 136, 3103
BstH2I RGCGCY 2 cut(s) 30, 108
BstHHI GCGC 4 cut(s) 29, 79, 107, 138
BstMAI GTCTC 4 cut(s) 983, 1180, 2742, 2929
BstMWI GCNNNNNNNGC 4 cut(s) 10, 58, 331, 971
BstNI CCWGG 2 cut(s) 265, 2208
BstNSI RCATGY 3 cut(s) 273, 761, 793
BstPI GGTNACC 2 cut(s) 1267, 2323
BstSCI CCNGG 3 cut(s) 263, 2206, 2905
BstSFI CTRYAG 2 cut(s) 1072, 2544
BstSLI GKGCMC 1 cut(s) 1210
BstUI CGCG 4 cut(s) 46, 77, 136, 3103
BstV1I GCAGC 6 cut(s) 321, 496, 566, 1117, 1508, 2356
BstV2I GAAGAC 5 cut(s) 28, 840, 1314, 1971, 2693
BstX2I RGATCY 2 cut(s) 2078, 2121
BstXI CCANNNNNNTGG 1 cut(s) 2083
BstYI RGATCY 2 cut(s) 2078, 2121
Bsu15I ATCGAT 1 cut(s) 959
BsuI GTATCC 2 cut(s) 2526, 2788
BsuRI GGCC 2 cut(s) 144, 3072
BsuTUI ATCGAT 1 cut(s) 959
BtgI CCRYGG 1 cut(s) 2919
BtgZI GCGATG 2 cut(s) 148, 575
BtrI CACGTC 1 cut(s) 160
BtsCI GGATG 5 cut(s) 376, 481, 2146, 2150, 2161
BtsIMutI CAGTG 7 cut(s) 988, 1591, 1616, 2116, 2285, 2356, 2938
BveI ACCTGC 1 cut(s) 2910
Cac8I GCNNGC 6 cut(s) 875, 879, 1089, 2150, 3001, 3074
CaiI CAGNNNCTG 1 cut(s) 1590
CciI TCATGA 1 cut(s) 2842
CfoI GCGC 4 cut(s) 29, 79, 107, 138
Cfr10I RCCGGY 2 cut(s) 140, 3072
Cfr13I GGNCC 4 cut(s) 55, 143, 293, 1843
ClaI ATCGAT 1 cut(s) 959
CseI GACGC 2 cut(s) 83, 95
Csp6I GTAC 5 cut(s) 383, 1094, 1321, 1626, 1704
CspCI CAANNNNNGTGG 4 cut(s) 1057, 1092, 1516, 1551
CviQI GTAC 5 cut(s) 383, 1094, 1321, 1626, 1704
DdeI CTNAG 7 cut(s) 430, 980, 1299, 1665, 2267, 2835, 3039
DinI GGCGCC 2 cut(s) 28, 106
DraI TTTAAA 1 cut(s) 2032
DraIII CACNNNGTG 1 cut(s) 2920
DrdI GACNNNNNNGTC 1 cut(s) 158
DseDI GACNNNNNNGTC 1 cut(s) 158
Eam1104I CTCTTC 4 cut(s) 964, 981, 2190, 2241
EarI CTCTTC 4 cut(s) 964, 981, 2190, 2241
Eco130I CCWWGG 1 cut(s) 1248
Eco24I GRGCYC 1 cut(s) 1409
Eco32I GATATC 1 cut(s) 1234
Eco47I GGWCC 3 cut(s) 55, 293, 1843
Eco57I CTGAAG 4 cut(s) 1326, 1983, 2499, 2694
Eco91I GGTNACC 2 cut(s) 1267, 2323
EcoNI CCTNNNNNAGG 1 cut(s) 2709
EcoO109I RGGNCCY 1 cut(s) 293
EcoO65I GGTNACC 2 cut(s) 1267, 2323
EcoRI GAATTC 2 cut(s) 657, 2851
EcoRII CCWGG 2 cut(s) 263, 2206
EcoRV GATATC 1 cut(s) 1234
EcoT14I CCWWGG 1 cut(s) 1248
EcoT38I GRGCYC 1 cut(s) 1409
EgeI GGCGCC 2 cut(s) 28, 106
EheI GGCGCC 2 cut(s) 28, 106
ErhI CCWWGG 1 cut(s) 1248
FalI AAGNNNNNCTT 8 cut(s) 488, 520, 1028, 1060, 2030, 2062, 2716, 2748
FaqI GGGAC 3 cut(s) 41, 1226, 2728
FauI CCCGC 1 cut(s) 66
FauNDI CATATG 1 cut(s) 2104
FbaI TGATCA 4 cut(s) 952, 1681, 2845, 3010
Fnu4HI GCNGC 7 cut(s) 14, 335, 510, 580, 1131, 1497, 2370
FokI GGATG 5 cut(s) 383, 488, 2153, 2157, 2168
FriOI GRGCYC 1 cut(s) 1409
Fsp4HI GCNGC 7 cut(s) 14, 335, 510, 580, 1131, 1497, 2370
FspBI CTAG 3 cut(s) 362, 966, 3133
GlaI GCGC 4 cut(s) 28, 78, 106, 137
GluI GCNGC 7 cut(s) 14, 335, 510, 580, 1131, 1497, 2370
GsaI CCCAGC 1 cut(s) 2958
GsuI CTGGAG 3 cut(s) 867, 1559, 2766
HaeII RGCGCY 2 cut(s) 30, 108
HaeIII GGCC 2 cut(s) 144, 3072
HapII CCGG 6 cut(s) 62, 141, 2125, 2194, 2906, 3073
HgaI GACGC 2 cut(s) 83, 95
HhaI GCGC 4 cut(s) 29, 79, 107, 138
Hin1I GRCGYC 2 cut(s) 27, 105
Hin6I GCGC 4 cut(s) 27, 77, 105, 136
HinP1I GCGC 4 cut(s) 27, 77, 105, 136
HincII GTYRAC 3 cut(s) 1437, 1871, 2689
HindII GTYRAC 3 cut(s) 1437, 1871, 2689
HindIII AAGCTT 2 cut(s) 1359, 2218
HpaII CCGG 6 cut(s) 62, 141, 2125, 2194, 2906, 3073
HphI GGTGA 6 cut(s) 902, 1279, 1988, 2586, 2783, 2847
Hpy166II GTNNAC 8 cut(s) 710, 1437, 1871, 2086, 2346, 2689, 2761, 2927
Hpy8I GTNNAC 8 cut(s) 710, 1437, 1871, 2086, 2346, 2689, 2761, 2927
Hpy99I CGWCG 3 cut(s) 77, 89, 152
HpyCH4III ACNGT 4 cut(s) 1073, 1174, 1586, 2262
HpyCH4IV ACGT 2 cut(s) 159, 180
HpyF10VI GCNNNNNNNGC 4 cut(s) 10, 58, 331, 971
HpyF3I CTNAG 7 cut(s) 430, 980, 1299, 1665, 2267, 2835, 3039
HpySE526I ACGT 2 cut(s) 159, 180
Hsp92I GRCGYC 2 cut(s) 27, 105
HspAI GCGC 4 cut(s) 27, 77, 105, 136
KasI GGCGCC 2 cut(s) 26, 104
KroI GCCGGC 1 cut(s) 3072
KroNI GCCGGC 1 cut(s) 3074
Ksp22I TGATCA 4 cut(s) 952, 1681, 2845, 3010
LguI GCTCTTC 1 cut(s) 964
LmnI GCTCC 8 cut(s) 9, 128, 886, 1412, 1613, 2291, 2586, 2824
Lsp1109I GCAGC 6 cut(s) 321, 496, 566, 1117, 1508, 2356
LweI GCATC 5 cut(s) 818, 2011, 2135, 2657, 2882
MaeI CTAG 3 cut(s) 362, 966, 3133
MaeII ACGT 2 cut(s) 159, 180
MflI RGATCY 2 cut(s) 2078, 2121
MhlI GDGCHC 3 cut(s) 1210, 1409, 1618
Mly113I GGCGCC 2 cut(s) 27, 105
MlyI GAGTC 2 cut(s) 998, 2191
MmeI TCCRAC 6 cut(s) 266, 1217, 1432, 1774, 2802, 3028
MroNI GCCGGC 1 cut(s) 3072
MroXI GAANNNNTTC 4 cut(s) 1459, 1720, 1937, 2220
MseI TTAA 9 cut(s) 21, 417, 561, 831, 843, 1383, 1926, 2031, 2945
MslI CAYNNNNRTG 3 cut(s) 913, 1514, 2560
MspA1I CMGCKG 1 cut(s) 1130
MspI CCGG 6 cut(s) 62, 141, 2125, 2194, 2906, 3073
MspR9I CCNGG 3 cut(s) 265, 2208, 2907
Mva1269I GAATGC 1 cut(s) 2727
MvaI CCWGG 2 cut(s) 265, 2208
MvnI CGCG 4 cut(s) 46, 77, 136, 3103
MwoI GCNNNNNNNGC 4 cut(s) 10, 58, 331, 971
NaeI GCCGGC 1 cut(s) 3074
NarI GGCGCC 2 cut(s) 27, 105
NciI CCSGG 1 cut(s) 2907
NdeI CATATG 1 cut(s) 2104
NgoMIV GCCGGC 1 cut(s) 3072
NlaIV GGNNCC 7 cut(s) 28, 57, 106, 145, 1408, 1674, 2123
NmuCI GTSAC 3 cut(s) 1267, 2114, 2402
NspI RCATGY 3 cut(s) 273, 761, 793
NspV TTCGAA 3 cut(s) 1356, 2533, 3097
OliI CACNNNNGTG 1 cut(s) 913
PagI TCATGA 1 cut(s) 2842
PciI ACATGT 1 cut(s) 789
PciSI GCTCTTC 1 cut(s) 964
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 156, 171
PctI GAATGC 1 cut(s) 2727
PdiI GCCGGC 1 cut(s) 3074
PdmI GAANNNNTTC 4 cut(s) 1459, 1720, 1937, 2220
PkrI GCNGC 7 cut(s) 15, 336, 511, 581, 1132, 1498, 2371
PleI GAGTC 2 cut(s) 997, 2191
PluTI GGCGCC 2 cut(s) 30, 108
PpsI GAGTC 2 cut(s) 997, 2191
Ppu21I YACGTR 1 cut(s) 181
PpuMI RGGWCCY 1 cut(s) 293
PscI ACATGT 1 cut(s) 789
PshBI ATTAAT 1 cut(s) 561
Psp5II RGGWCCY 1 cut(s) 293
Psp6I CCWGG 2 cut(s) 263, 2206
PspEI GGTNACC 2 cut(s) 1267, 2323
PspFI CCCAGC 1 cut(s) 2954
PspGI CCWGG 2 cut(s) 263, 2206
PspN4I GGNNCC 7 cut(s) 28, 57, 106, 145, 1408, 1674, 2123
PspPI GGNCC 4 cut(s) 55, 143, 293, 1843
PspPPI RGGWCCY 1 cut(s) 293
PstNI CAGNNNCTG 1 cut(s) 1590
PsuI RGATCY 2 cut(s) 2078, 2121
PvuII CAGCTG 1 cut(s) 1130
RsaI GTAC 5 cut(s) 384, 1095, 1322, 1627, 1705
RsaNI GTAC 5 cut(s) 383, 1094, 1321, 1626, 1704
RseI CAYNNNNRTG 3 cut(s) 913, 1514, 2560
SapI GCTCTTC 1 cut(s) 964
SaqAI TTAA 9 cut(s) 21, 417, 561, 831, 843, 1383, 1926, 2031, 2945
SatI GCNGC 7 cut(s) 14, 335, 510, 580, 1131, 1497, 2370
Sau96I GGNCC 4 cut(s) 55, 143, 293, 1843
SchI GAGTC 2 cut(s) 998, 2191
ScrFI CCNGG 3 cut(s) 265, 2208, 2907
SduI GDGCHC 3 cut(s) 1210, 1409, 1618
SfaNI GCATC 5 cut(s) 818, 2011, 2135, 2657, 2882
SfcI CTRYAG 2 cut(s) 1072, 2544
SfoI GGCGCC 2 cut(s) 28, 106
SfuI TTCGAA 3 cut(s) 1356, 2533, 3097
SinI GGWCC 3 cut(s) 55, 293, 1843
SmiMI CAYNNNNRTG 3 cut(s) 913, 1514, 2560
SmlI CTYRAG 3 cut(s) 92, 603, 2601
SmoI CTYRAG 3 cut(s) 92, 603, 2601
SsiI CCGC 5 cut(s) 14, 46, 59, 1942, 2697
SspDI GGCGCC 2 cut(s) 26, 104
SspI AATATT 1 cut(s) 1387
SspMI CTAG 3 cut(s) 362, 966, 3133
StyD4I CCNGG 3 cut(s) 263, 2206, 2905
StyI CCWWGG 1 cut(s) 1248
TaaI ACNGT 4 cut(s) 1073, 1174, 1586, 2262
TaiI ACGT 2 cut(s) 162, 183
TaqI TCGA 9 cut(s) 72, 796, 959, 1356, 2095, 2485, 2533, 2933, 3097
TaqII GACCGA 1 cut(s) 3047
TatI WGTACW 2 cut(s) 382, 1320
TauI GCSGC 1 cut(s) 16
Tru1I TTAA 9 cut(s) 21, 417, 561, 831, 843, 1383, 1926, 2031, 2945
Tru9I TTAA 9 cut(s) 21, 417, 561, 831, 843, 1383, 1926, 2031, 2945
TscAI CASTG 7 cut(s) 988, 1591, 1623, 2123, 2292, 2356, 2945
TseFI GTSAC 3 cut(s) 1267, 2114, 2402
TseI GCWGC 6 cut(s) 334, 509, 579, 1130, 1496, 2369
Tsp45I GTSAC 3 cut(s) 1267, 2114, 2402
TspDTI ATGAA 9 cut(s) 28, 423, 600, 684, 1502, 1713, 1902, 2259, 2831
TspGWI ACGGA 3 cut(s) 688, 2190, 2908
TspRI CASTG 7 cut(s) 988, 1591, 1623, 2123, 2292, 2356, 2945
VpaK11BI GGWCC 3 cut(s) 55, 293, 1843
VspI ATTAAT 1 cut(s) 561
XagI CCTNNNNNAGG 1 cut(s) 2709
XapI RAATTY 9 cut(s) 346, 657, 736, 1120, 1650, 1934, 1951, 2297, 2851
XceI RCATGY 3 cut(s) 273, 761, 793
XmnI GAANNNNTTC 4 cut(s) 1459, 1720, 1937, 2220
XspI CTAG 3 cut(s) 362, 966, 3133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.