DNA topoisomerase 2-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G77320 AT1G77320 AT1G77320 |
| fragaria_vesca | FvH4_2g27821 FvH4_2g27821 FvH4_2g27821 FvH4_2g27821 FvH4_2g27821 |
| malus_domestica | MD08G1159000.v1.1 MD08G1159100.v1.1 |
| prunus_persica | Prupe.1G489800_v2.0.a1 |
| pyrus_communis | pycom348g00050 pycom348g00060 |
| rosa_chinensis | RchiOBHm_Chr6g0296681 RchiOBHm_Chr6g0296691 RchiOBHm_Chr7g0211681 |
| rosa_laevigata | RLG00000011670 RLG00000019186 RLG00000030023 |
| rosa_multiflora | Rmu_co8128350.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00092010 Rroxscaffold_5G00341250 Rroxscaffold_7G00171260 |
| rosa_rugosa | Rorug06G0264200 Rorug06G0264300 Rorug06G0264400.1 Rorug06G0264500 |
| rosa_samantha | Rh4CG165900 Rh6AG376000 Rh6BG384300 Rh6CG389400 Rh6DG376800 Rh7CG482500 Rh7DG451300 |
| rosa_wichuraiana | Rw6G032870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1450 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 542 |
| AatII | GACGTC | 2 cut(s) | 183, 368 |
| Acc36I | ACCTGC | 1 cut(s) | 1450 |
| AccB1I | GGYRCC | 2 cut(s) | 488, 1438 |
| AccI | GTMKAC | 4 cut(s) | 45, 1582, 2077, 2388 |
| AccII | CGCG | 2 cut(s) | 430, 473 |
| AciI | CCGC | 8 cut(s) | 58, 200, 388, 398, 430, 443, 520, 525 |
| AclWI | GGATC | 7 cut(s) | 585, 1445, 1458, 1765, 1977, 1990, 2336 |
| AcoI | YGGCCR | 1 cut(s) | 2230 |
| AcsI | RAATTY | 5 cut(s) | 267, 311, 972, 1662, 2158 |
| AcuI | CTGAAG | 4 cut(s) | 1533, 1653, 1836, 2190 |
| AcvI | CACGTG | 1 cut(s) | 565 |
| AcyI | GRCGYC | 3 cut(s) | 180, 365, 489 |
| AfaI | GTAC | 4 cut(s) | 159, 699, 1529, 2308 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 283, 387, 659, 682, 947, 1202, 1340 |
| AflII | CTTAAG | 1 cut(s) | 476 |
| AjiI | CACGTC | 1 cut(s) | 544 |
| AjnI | CCWGG | 3 cut(s) | 435, 1736, 2289 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 803, 835 |
| Alw21I | GWGCWC | 5 cut(s) | 291, 355, 1058, 1825, 2253 |
| Alw26I | GTCTC | 5 cut(s) | 372, 921, 1378, 2272, 2380 |
| Alw44I | GTGCAC | 2 cut(s) | 1054, 2249 |
| AlwI | GGATC | 7 cut(s) | 585, 1445, 1458, 1765, 1977, 1990, 2336 |
| Ama87I | CYCGRG | 1 cut(s) | 446 |
| AoxI | GGCC | 4 cut(s) | 411, 1117, 2230, 2394 |
| ApaLI | GTGCAC | 2 cut(s) | 1054, 2249 |
| ApeKI | GCWGC | 4 cut(s) | 507, 1328, 1703, 1994 |
| ApoI | RAATTY | 5 cut(s) | 267, 311, 972, 1662, 2158 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1030, 1666 |
| AspLEI | GCGC | 2 cut(s) | 475, 491 |
| AspS9I | GGNCC | 4 cut(s) | 411, 439, 608, 1117 |
| AsuC2I | CCSGG | 1 cut(s) | 1618 |
| AsuHPI | GGTGA | 3 cut(s) | 1100, 1529, 1988 |
| AsuII | TTCGAA | 1 cut(s) | 1316 |
| AvaI | CYCGRG | 1 cut(s) | 446 |
| AvaII | GGWCC | 2 cut(s) | 439, 608 |
| BaeGI | GKGCMC | 2 cut(s) | 1058, 2253 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2298, 2331 |
| BalI | TGGCCA | 1 cut(s) | 2232 |
| BamHI | GGATCC | 2 cut(s) | 1450, 1982 |
| BanI | GGYRCC | 2 cut(s) | 488, 1438 |
| BanII | GRGCYC | 4 cut(s) | 291, 355, 649, 1616 |
| BbrPI | CACGTG | 1 cut(s) | 565 |
| BbsI | GAAGAC | 3 cut(s) | 351, 412, 490 |
| Bbv12I | GWGCWC | 5 cut(s) | 291, 355, 1058, 1825, 2253 |
| BbvI | GCAGC | 4 cut(s) | 494, 1315, 1715, 2006 |
| BccI | CCATC | 7 cut(s) | 680, 1107, 1306, 1478, 1858, 2128, 2222 |
| BceAI | ACGGC | 4 cut(s) | 184, 190, 411, 502 |
| BciT130I | CCWGG | 3 cut(s) | 437, 1738, 2291 |
| BclI | TGATCA | 3 cut(s) | 1150, 1753, 1888 |
| BcnI | CCSGG | 1 cut(s) | 1618 |
| BcoDI | GTCTC | 5 cut(s) | 372, 921, 1378, 2272, 2380 |
| BfaI | CTAG | 4 cut(s) | 189, 605, 1272, 1839 |
| BfmI | CTRYAG | 1 cut(s) | 2078 |
| BfoI | RGCGCY | 1 cut(s) | 492 |
| BfrI | CTTAAG | 1 cut(s) | 476 |
| BfuAI | ACCTGC | 1 cut(s) | 1450 |
| BisI | GCNGC | 6 cut(s) | 59, 399, 508, 1329, 1704, 1995 |
| BlsI | GCNGC | 6 cut(s) | 60, 400, 509, 1330, 1705, 1996 |
| BmcAI | AGTACT | 1 cut(s) | 699 |
| Bme1390I | CCNGG | 4 cut(s) | 437, 1618, 1738, 2291 |
| Bme18I | GGWCC | 2 cut(s) | 439, 608 |
| BmeT110I | CYCGRG | 1 cut(s) | 446 |
| BmgBI | CACGTC | 1 cut(s) | 544 |
| BmgT120I | GGNCC | 4 cut(s) | 411, 439, 608, 1117 |
| BmrFI | CCNGG | 4 cut(s) | 437, 1618, 1738, 2291 |
| BmsI | GCATC | 5 cut(s) | 88, 375, 383, 913, 2284 |
| BpiI | GAAGAC | 3 cut(s) | 351, 412, 490 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 275, 307 |
| BpmI | CTGGAG | 2 cut(s) | 331, 1065 |
| Bpu14I | TTCGAA | 1 cut(s) | 1316 |
| BpuEI | CTTGAG | 1 cut(s) | 903 |
| BpuMI | CCSGG | 1 cut(s) | 1618 |
| BsaAI | YACGTR | 1 cut(s) | 565 |
| BsaBI | GATNNNNATC | 2 cut(s) | 151, 1752 |
| BsaHI | GRCGYC | 3 cut(s) | 180, 365, 489 |
| BsaI | GGTCTC | 1 cut(s) | 2272 |
| BsaJI | CCNNGG | 5 cut(s) | 588, 1446, 1455, 1986, 2289 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2208, 2238 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 283, 387, 659, 682, 947, 1202, 1340 |
| Bse1I | ACTGG | 3 cut(s) | 1590, 1924, 2330 |
| Bse3DI | GCAATG | 3 cut(s) | 687, 762, 1273 |
| Bse8I | GATNNNNATC | 2 cut(s) | 151, 1752 |
| BseBI | CCWGG | 3 cut(s) | 437, 1738, 2291 |
| BseDI | CCNNGG | 5 cut(s) | 588, 1446, 1455, 1986, 2289 |
| BseGI | GGATG | 5 cut(s) | 374, 691, 796, 2123, 2299 |
| BseJI | GATNNNNATC | 2 cut(s) | 151, 1752 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 283, 387, 659, 682, 947, 1202, 1340 |
| BseMI | GCAATG | 3 cut(s) | 687, 762, 1273 |
| BseMII | CTCAG | 2 cut(s) | 341, 1520 |
| BseNI | ACTGG | 3 cut(s) | 1590, 1924, 2330 |
| BseRI | GAGGAG | 3 cut(s) | 299, 1199, 2229 |
| BseSI | GKGCMC | 2 cut(s) | 1058, 2253 |
| BseXI | GCAGC | 4 cut(s) | 494, 1315, 1715, 2006 |
| BsgI | GTGCAG | 1 cut(s) | 169 |
| Bsh1236I | CGCG | 2 cut(s) | 430, 473 |
| BshFI | GGCC | 4 cut(s) | 413, 1119, 2232, 2396 |
| BshNI | GGYRCC | 2 cut(s) | 488, 1438 |
| BsiHKAI | GWGCWC | 5 cut(s) | 291, 355, 1058, 1825, 2253 |
| BsiHKCI | CYCGRG | 1 cut(s) | 446 |
| BsiSI | CCGG | 2 cut(s) | 371, 1618 |
| BslFI | GGGAC | 1 cut(s) | 425 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 283, 387, 659, 682, 947, 1202, 1340 |
| BsmAI | GTCTC | 5 cut(s) | 372, 921, 1378, 2272, 2380 |
| BsmBI | CGTCTC | 1 cut(s) | 372 |
| BsmFI | GGGAC | 1 cut(s) | 425 |
| BsnI | GGCC | 4 cut(s) | 413, 1119, 2232, 2396 |
| Bso31I | GGTCTC | 1 cut(s) | 2272 |
| BsoBI | CYCGRG | 1 cut(s) | 446 |
| Bsp119I | TTCGAA | 1 cut(s) | 1316 |
| Bsp1286I | GDGCHC | 7 cut(s) | 291, 355, 649, 1058, 1616, 1825, 2253 |
| Bsp19I | CCATGG | 1 cut(s) | 1986 |
| BspACI | CCGC | 8 cut(s) | 58, 200, 388, 398, 430, 443, 520, 525 |
| BspANI | GGCC | 4 cut(s) | 413, 1119, 2232, 2396 |
| BspCNI | CTCAG | 2 cut(s) | 340, 1519 |
| BspFNI | CGCG | 2 cut(s) | 430, 473 |
| BspHI | TCATGA | 1 cut(s) | 1756 |
| BspMI | ACCTGC | 1 cut(s) | 1450 |
| BspPI | GGATC | 7 cut(s) | 585, 1445, 1458, 1765, 1977, 1990, 2336 |
| BspQI | GCTCTTC | 2 cut(s) | 468, 654 |
| BspT104I | TTCGAA | 1 cut(s) | 1316 |
| BspT107I | GGYRCC | 2 cut(s) | 488, 1438 |
| BspTI | CTTAAG | 1 cut(s) | 476 |
| BspTNI | GGTCTC | 1 cut(s) | 2272 |
| BsrDI | GCAATG | 3 cut(s) | 687, 762, 1273 |
| BsrI | ACTGG | 3 cut(s) | 1590, 1924, 2330 |
| BssECI | CCNNGG | 5 cut(s) | 588, 1446, 1455, 1986, 2289 |
| BssNAI | GTATAC | 1 cut(s) | 46 |
| BssNI | GRCGYC | 3 cut(s) | 180, 365, 489 |
| BssT1I | CCWWGG | 4 cut(s) | 588, 1446, 1455, 1986 |
| Bst1107I | GTATAC | 1 cut(s) | 46 |
| Bst2UI | CCWGG | 3 cut(s) | 437, 1738, 2291 |
| Bst4CI | ACNGT | 6 cut(s) | 137, 874, 913, 1348, 1372, 2029 |
| Bst6I | CTCTTC | 3 cut(s) | 468, 654, 1944 |
| BstACI | GRCGYC | 3 cut(s) | 180, 365, 489 |
| BstAFI | CTTAAG | 1 cut(s) | 476 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1291 |
| BstBAI | YACGTR | 1 cut(s) | 565 |
| BstBI | TTCGAA | 1 cut(s) | 1316 |
| BstC8I | GCNNGC | 5 cut(s) | 634, 638, 1880, 1884, 2117 |
| BstDEI | CTNAG | 4 cut(s) | 327, 581, 1506, 1874 |
| BstDSI | CCRYGG | 1 cut(s) | 1986 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 281, 657, 1200 |
| BstF5I | GGATG | 5 cut(s) | 374, 691, 796, 2123, 2299 |
| BstFNI | CGCG | 2 cut(s) | 430, 473 |
| BstH2I | RGCGCY | 1 cut(s) | 492 |
| BstHHI | GCGC | 2 cut(s) | 475, 491 |
| BstMAI | GTCTC | 5 cut(s) | 372, 921, 1378, 2272, 2380 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 183, 199, 1291 |
| BstNI | CCWGG | 3 cut(s) | 437, 1738, 2291 |
| BstNSI | RCATGY | 1 cut(s) | 1882 |
| BstSCI | CCNGG | 4 cut(s) | 435, 1616, 1736, 2289 |
| BstSFI | CTRYAG | 1 cut(s) | 2078 |
| BstSLI | GKGCMC | 2 cut(s) | 1058, 2253 |
| BstUI | CGCG | 2 cut(s) | 430, 473 |
| BstV1I | GCAGC | 4 cut(s) | 494, 1315, 1715, 2006 |
| BstV2I | GAAGAC | 3 cut(s) | 351, 412, 490 |
| BstX2I | RGATCY | 4 cut(s) | 577, 1450, 1770, 1982 |
| BstYI | RGATCY | 4 cut(s) | 577, 1450, 1770, 1982 |
| BstZ17I | GTATAC | 1 cut(s) | 46 |
| BsuRI | GGCC | 4 cut(s) | 413, 1119, 2232, 2396 |
| BtgI | CCRYGG | 1 cut(s) | 1986 |
| BtgZI | GCGATG | 2 cut(s) | 890, 1777 |
| BtrI | CACGTC | 1 cut(s) | 544 |
| BtsCI | GGATG | 5 cut(s) | 374, 691, 796, 2123, 2299 |
| BtsIMutI | CAGTG | 5 cut(s) | 315, 870, 896, 909, 2323 |
| BveI | ACCTGC | 1 cut(s) | 1450 |
| Cac8I | GCNNGC | 5 cut(s) | 634, 638, 1880, 1884, 2117 |
| CciI | TCATGA | 1 cut(s) | 1756 |
| CfoI | GCGC | 2 cut(s) | 475, 491 |
| Cfr13I | GGNCC | 4 cut(s) | 411, 439, 608, 1117 |
| CseI | GACGC | 4 cut(s) | 467, 479, 693, 1654 |
| CsiI | ACCWGGT | 1 cut(s) | 435 |
| Csp6I | GTAC | 4 cut(s) | 158, 698, 1528, 2307 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1255, 1290 |
| CviQI | GTAC | 4 cut(s) | 158, 698, 1528, 2307 |
| DdeI | CTNAG | 4 cut(s) | 327, 581, 1506, 1874 |
| DinI | GGCGCC | 1 cut(s) | 490 |
| DraI | TTTAAA | 1 cut(s) | 846 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 542 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 542 |
| EaeI | YGGCCR | 1 cut(s) | 2230 |
| Eam1104I | CTCTTC | 3 cut(s) | 468, 654, 1944 |
| EarI | CTCTTC | 3 cut(s) | 468, 654, 1944 |
| Ecl136II | GAGCTC | 2 cut(s) | 289, 353 |
| Eco130I | CCWWGG | 4 cut(s) | 588, 1446, 1455, 1986 |
| Eco147I | AGGCCT | 1 cut(s) | 2396 |
| Eco24I | GRGCYC | 4 cut(s) | 291, 355, 649, 1616 |
| Eco31I | GGTCTC | 1 cut(s) | 2272 |
| Eco47I | GGWCC | 2 cut(s) | 439, 608 |
| Eco53kI | GAGCTC | 2 cut(s) | 289, 353 |
| Eco57I | CTGAAG | 4 cut(s) | 1533, 1653, 1836, 2190 |
| Eco72I | CACGTG | 1 cut(s) | 565 |
| Eco88I | CYCGRG | 1 cut(s) | 446 |
| EcoICRI | GAGCTC | 2 cut(s) | 289, 353 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 281, 657, 1200 |
| EcoO109I | RGGNCCY | 1 cut(s) | 608 |
| EcoRI | GAATTC | 2 cut(s) | 972, 1662 |
| EcoRII | CCWGG | 3 cut(s) | 435, 1736, 2289 |
| EcoT14I | CCWWGG | 4 cut(s) | 588, 1446, 1455, 1986 |
| EcoT22I | ATGCAT | 1 cut(s) | 2372 |
| EcoT38I | GRGCYC | 4 cut(s) | 291, 355, 649, 1616 |
| EgeI | GGCGCC | 1 cut(s) | 490 |
| EheI | GGCGCC | 1 cut(s) | 490 |
| ErhI | CCWWGG | 4 cut(s) | 588, 1446, 1455, 1986 |
| Esp3I | CGTCTC | 1 cut(s) | 372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1464, 1496 |
| FaqI | GGGAC | 1 cut(s) | 425 |
| FauI | CCCGC | 3 cut(s) | 207, 450, 527 |
| FauNDI | CATATG | 1 cut(s) | 2311 |
| FbaI | TGATCA | 3 cut(s) | 1150, 1753, 1888 |
| FblI | GTMKAC | 4 cut(s) | 45, 1582, 2077, 2388 |
| Fnu4HI | GCNGC | 6 cut(s) | 59, 399, 508, 1329, 1704, 1995 |
| FokI | GGATG | 5 cut(s) | 361, 698, 803, 2110, 2306 |
| FriOI | GRGCYC | 4 cut(s) | 291, 355, 649, 1616 |
| Fsp4HI | GCNGC | 6 cut(s) | 59, 399, 508, 1329, 1704, 1995 |
| FspBI | CTAG | 4 cut(s) | 189, 605, 1272, 1839 |
| GlaI | GCGC | 2 cut(s) | 474, 490 |
| GluI | GCNGC | 6 cut(s) | 59, 399, 508, 1329, 1704, 1995 |
| GsuI | CTGGAG | 2 cut(s) | 331, 1065 |
| HaeII | RGCGCY | 1 cut(s) | 492 |
| HaeIII | GGCC | 4 cut(s) | 413, 1119, 2232, 2396 |
| HapII | CCGG | 2 cut(s) | 371, 1618 |
| HgaI | GACGC | 4 cut(s) | 467, 479, 693, 1654 |
| HhaI | GCGC | 2 cut(s) | 475, 491 |
| Hin1I | GRCGYC | 3 cut(s) | 180, 365, 489 |
| Hin6I | GCGC | 2 cut(s) | 473, 489 |
| HinP1I | GCGC | 2 cut(s) | 473, 489 |
| HincII | GTYRAC | 2 cut(s) | 796, 1477 |
| HindII | GTYRAC | 2 cut(s) | 796, 1477 |
| HindIII | AAGCTT | 2 cut(s) | 1004, 1566 |
| HinfI | GANTC | 9 cut(s) | 320, 551, 923, 1187, 1313, 1352, 1460, 1502, 1857 |
| HpaI | GTTAAC | 2 cut(s) | 796, 1477 |
| HpaII | CCGG | 2 cut(s) | 371, 1618 |
| HphI | GGTGA | 3 cut(s) | 1100, 1529, 1988 |
| Hpy166II | GTNNAC | 9 cut(s) | 46, 666, 796, 1056, 1477, 1583, 2078, 2251, 2389 |
| Hpy188I | TCNGA | 9 cut(s) | 559, 1072, 1128, 1357, 1513, 1537, 1573, 1672, 2109 |
| Hpy8I | GTNNAC | 9 cut(s) | 46, 666, 796, 1056, 1477, 1583, 2078, 2251, 2389 |
| Hpy99I | CGWCG | 6 cut(s) | 66, 182, 367, 461, 473, 709 |
| HpyAV | CCTTC | 7 cut(s) | 525, 1079, 1508, 1677, 1811, 2077, 2412 |
| HpyCH4III | ACNGT | 6 cut(s) | 137, 874, 913, 1348, 1372, 2029 |
| HpyCH4IV | ACGT | 5 cut(s) | 180, 365, 417, 543, 564 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 183, 199, 1291 |
| HpyF3I | CTNAG | 4 cut(s) | 327, 581, 1506, 1874 |
| HpySE526I | ACGT | 5 cut(s) | 180, 365, 417, 543, 564 |
| Hsp92I | GRCGYC | 3 cut(s) | 180, 365, 489 |
| HspAI | GCGC | 2 cut(s) | 473, 489 |
| KasI | GGCGCC | 1 cut(s) | 488 |
| Ksp22I | TGATCA | 3 cut(s) | 1150, 1753, 1888 |
| KspAI | GTTAAC | 2 cut(s) | 796, 1477 |
| LguI | GCTCTTC | 2 cut(s) | 468, 654 |
| LmnI | GCTCC | 5 cut(s) | 286, 358, 1411, 1619, 1820 |
| Lsp1109I | GCAGC | 4 cut(s) | 494, 1315, 1715, 2006 |
| LweI | GCATC | 5 cut(s) | 88, 375, 383, 913, 2284 |
| MabI | ACCWGGT | 1 cut(s) | 435 |
| MaeI | CTAG | 4 cut(s) | 189, 605, 1272, 1839 |
| MaeII | ACGT | 5 cut(s) | 180, 365, 417, 543, 564 |
| MaeIII | GTNAC | 7 cut(s) | 748, 964, 1075, 1088, 1132, 1976, 2321 |
| MfeI | CAATTG | 1 cut(s) | 24 |
| MflI | RGATCY | 4 cut(s) | 577, 1450, 1770, 1982 |
| MhlI | GDGCHC | 7 cut(s) | 291, 355, 649, 1058, 1616, 1825, 2253 |
| MlsI | TGGCCA | 1 cut(s) | 2232 |
| MluNI | TGGCCA | 1 cut(s) | 2232 |
| Mly113I | GGCGCC | 1 cut(s) | 489 |
| MlyI | GAGTC | 3 cut(s) | 560, 1196, 1469 |
| MmeI | TCCRAC | 3 cut(s) | 1639, 1914, 1981 |
| Mox20I | TGGCCA | 1 cut(s) | 2232 |
| Mph1103I | ATGCAT | 1 cut(s) | 2372 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1030, 1666 |
| MscI | TGGCCA | 1 cut(s) | 2232 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1111 |
| Msp20I | TGGCCA | 1 cut(s) | 2232 |
| MspA1I | CMGCKG | 2 cut(s) | 1328, 1997 |
| MspCI | CTTAAG | 1 cut(s) | 476 |
| MspI | CCGG | 2 cut(s) | 371, 1618 |
| MspR9I | CCNGG | 4 cut(s) | 437, 1618, 1738, 2291 |
| MunI | CAATTG | 1 cut(s) | 24 |
| MvaI | CCWGG | 3 cut(s) | 437, 1738, 2291 |
| MvnI | CGCG | 2 cut(s) | 430, 473 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 183, 199, 1291 |
| NarI | GGCGCC | 1 cut(s) | 489 |
| NciI | CCSGG | 1 cut(s) | 1618 |
| NcoI | CCATGG | 1 cut(s) | 1986 |
| NdeI | CATATG | 1 cut(s) | 2311 |
| NmuCI | GTSAC | 3 cut(s) | 1088, 1976, 2321 |
| NsiI | ATGCAT | 1 cut(s) | 2372 |
| NspI | RCATGY | 1 cut(s) | 1882 |
| NspV | TTCGAA | 1 cut(s) | 1316 |
| PaeI | GCATGC | 1 cut(s) | 1882 |
| PagI | TCATGA | 1 cut(s) | 1756 |
| PaqCI | CACCTGC | 1 cut(s) | 1450 |
| PceI | AGGCCT | 1 cut(s) | 2396 |
| PciSI | GCTCTTC | 2 cut(s) | 468, 654 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 174, 465, 540, 555 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1030, 1666 |
| PfeI | GAWTC | 6 cut(s) | 320, 923, 1313, 1352, 1502, 1857 |
| PkrI | GCNGC | 6 cut(s) | 60, 400, 509, 1330, 1705, 1996 |
| PleI | GAGTC | 3 cut(s) | 559, 1195, 1468 |
| PluTI | GGCGCC | 1 cut(s) | 492 |
| PmaCI | CACGTG | 1 cut(s) | 565 |
| PmlI | CACGTG | 1 cut(s) | 565 |
| PpsI | GAGTC | 3 cut(s) | 559, 1195, 1468 |
| Ppu21I | YACGTR | 1 cut(s) | 565 |
| PpuMI | RGGWCCY | 1 cut(s) | 608 |
| Psp124BI | GAGCTC | 2 cut(s) | 291, 355 |
| Psp5II | RGGWCCY | 1 cut(s) | 608 |
| Psp6I | CCWGG | 3 cut(s) | 435, 1736, 2289 |
| PspCI | CACGTG | 1 cut(s) | 565 |
| PspGI | CCWGG | 3 cut(s) | 435, 1736, 2289 |
| PspPI | GGNCC | 4 cut(s) | 411, 439, 608, 1117 |
| PspPPI | RGGWCCY | 1 cut(s) | 608 |
| PsuI | RGATCY | 4 cut(s) | 577, 1450, 1770, 1982 |
| PvuII | CAGCTG | 2 cut(s) | 1328, 1997 |
| RsaI | GTAC | 4 cut(s) | 159, 699, 1529, 2308 |
| RsaNI | GTAC | 4 cut(s) | 158, 698, 1528, 2307 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1111 |
| SacI | GAGCTC | 2 cut(s) | 291, 355 |
| SapI | GCTCTTC | 2 cut(s) | 468, 654 |
| SatI | GCNGC | 6 cut(s) | 59, 399, 508, 1329, 1704, 1995 |
| Sau96I | GGNCC | 4 cut(s) | 411, 439, 608, 1117 |
| ScaI | AGTACT | 1 cut(s) | 699 |
| SchI | GAGTC | 3 cut(s) | 560, 1196, 1469 |
| ScrFI | CCNGG | 4 cut(s) | 437, 1618, 1738, 2291 |
| SduI | GDGCHC | 7 cut(s) | 291, 355, 649, 1058, 1616, 1825, 2253 |
| SexAI | ACCWGGT | 1 cut(s) | 435 |
| SfaNI | GCATC | 5 cut(s) | 88, 375, 383, 913, 2284 |
| SfcI | CTRYAG | 1 cut(s) | 2078 |
| SfoI | GGCGCC | 1 cut(s) | 490 |
| SfuI | TTCGAA | 1 cut(s) | 1316 |
| SinI | GGWCC | 2 cut(s) | 439, 608 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1111 |
| SmlI | CTYRAG | 2 cut(s) | 476, 918 |
| SmoI | CTYRAG | 2 cut(s) | 476, 918 |
| SphI | GCATGC | 1 cut(s) | 1882 |
| SseBI | AGGCCT | 1 cut(s) | 2396 |
| SsiI | CCGC | 8 cut(s) | 58, 200, 388, 398, 430, 443, 520, 525 |
| SspDI | GGCGCC | 1 cut(s) | 488 |
| SspI | AATATT | 2 cut(s) | 1031, 2145 |
| SspMI | CTAG | 4 cut(s) | 189, 605, 1272, 1839 |
| SstI | GAGCTC | 2 cut(s) | 291, 355 |
| StuI | AGGCCT | 1 cut(s) | 2396 |
| StyD4I | CCNGG | 4 cut(s) | 435, 1616, 1736, 2289 |
| StyI | CCWWGG | 4 cut(s) | 588, 1446, 1455, 1986 |
| TaaI | ACNGT | 6 cut(s) | 137, 874, 913, 1348, 1372, 2029 |
| TaiI | ACGT | 5 cut(s) | 183, 368, 420, 546, 567 |
| TaqI | TCGA | 7 cut(s) | 362, 456, 549, 1316, 1677, 1862, 2378 |
| TatI | WGTACW | 3 cut(s) | 697, 1527, 2306 |
| TauI | GCSGC | 2 cut(s) | 61, 401 |
| TfiI | GAWTC | 6 cut(s) | 320, 923, 1313, 1352, 1502, 1857 |
| TscAI | CASTG | 5 cut(s) | 322, 877, 896, 916, 2330 |
| TseFI | GTSAC | 3 cut(s) | 1088, 1976, 2321 |
| TseI | GCWGC | 4 cut(s) | 507, 1328, 1703, 1994 |
| Tsp45I | GTSAC | 3 cut(s) | 1088, 1976, 2321 |
| TspDTI | ATGAA | 6 cut(s) | 412, 738, 915, 1709, 1985, 2351 |
| TspGWI | ACGGA | 5 cut(s) | 145, 296, 345, 1995, 2116 |
| TspRI | CASTG | 5 cut(s) | 322, 877, 896, 916, 2330 |
| Vha464I | CTTAAG | 1 cut(s) | 476 |
| VneI | GTGCAC | 2 cut(s) | 1054, 2249 |
| VpaK11BI | GGWCC | 2 cut(s) | 439, 608 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 281, 657, 1200 |
| XapI | RAATTY | 5 cut(s) | 267, 311, 972, 1662, 2158 |
| XceI | RCATGY | 1 cut(s) | 1882 |
| XmiI | GTMKAC | 4 cut(s) | 45, 1582, 2077, 2388 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1030, 1666 |
| XspI | CTAG | 4 cut(s) | 189, 605, 1272, 1839 |
| ZraI | GACGTC | 2 cut(s) | 181, 366 |
| ZrmI | AGTACT | 1 cut(s) | 699 |
| Zsp2I | ATGCAT | 1 cut(s) | 2372 |