AT1G77320

twin BRCT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0003647
Physical Location & Seq
Forward (+)
29056427 .. 29062978
6552 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G77320.2

Sequence Viewer

Length: 2919 bp
ATGAAGACGACGCAACTGTTCAAAGGGGCAAATGTTTTTATGTCTCGGAATCTGGTGCCTCCTGAAGTCTTCGACACACTTCTCGATGCTTTCAAGCTTAACGGTGCCGAAATCTTCCTCTGCTGCGACCCATCTCGGAGTGGTCCCTCTGATTTCCATGTCATCGCTTCTCCCGATCATGAGAAATTTAAGGATCTTAAAGCCAAGGGTTGTAACTTAATAGGTCCGCAATGTGCGCTCTTCTGTGCAAAAGAGGGTAGACCACTGCCACAAAGGGGATTCACTTGTTGCCTAGCCATGGATGGTCTAAAAGTTCTTGCTTCTGGTTTTCTGGTAGATGAGAAGGTCAAGATCAAGGAGTTGGTTACTTCCATGGGGGGCGTTTTACTTTCCAGAGCTTCTTCTGATGTGAACTTCGTCATTGTGAAAAATGTCTTGGCTGCCAAGTACAAGTGGGCCCTGAATAAGAAGCCAATCGTTACTCTGAATTGGTTACATCGGTGTTGGAATGAGCACCGTGTGGTTCCTCAGGAACCATATAAGATTCCTCCTTTTTCTGGATTGACAATCTGTGTCACAAGAATTCCAGCAGATGAACGCAAGGGAATGGAAAAGGTAATTTCAGAATATGGAGGGAGCTACTCTGCTGAGCTAACAAAGAGTTGTACACATTTGATCGCTGATGCTGCTGAAGGTGACAAATACAAAGTTGCTCGAAAATGGGGTCACATTCAAATTGTCACACGGAAATGGTTTCAGCAGTCCATCGATAAAAAGGTTTGTCTCAATGAAGAGTCATATCCTGTTCTCGGTTCCATACCCTTGACAAGAGGAGTGCGAGATTTGGGGGTTCATAATGGTCTAGAAAAGTTTCCTTCGGCTGCAACTGCGTCCGCGGCAGATTCATATGTTTCTTGTGCTCAGTCTAGAGACTCAGATATAGAAGCTTCTGCTTCACAAAATGTTTTTCCCACTTCTATGAATCCCAGTACCGATGTTAAAGAACCAGGTGGAGGCCCAACGGCAAGGCCGCAAGAGCAAAACATTGATGGTTGTACTGCCAGGGATTCAGAATCCGAAGACAATGACTTGTACTTATCAGATTGTAGAATTTTCTTGCTTGGTTTTGAAGCTTCTGAAATGCGTAAACTTGCTAAGTTGGTCCGCAGAGGTGGTGGATCCCGGTATATGCTGCTTAACGAAAGAATGACTCATATTGTTGTTGGAACTCCTTCAGAGAGTGAGAAAAGAGAAGCAAGGAGTGTTGCAGCTTCTGGTGTCATTCAAGTAGTCATACCCAGTTGGCTTGAAGATTGTGATCGTGAGAAAAAAGAAATCCCCGTTCATAATATATATACTGCTAACCACTTGATTCTTCCAAGAGATTCTGCATGCTTGACCAAGGGGTCATTTGCAAGGATGTCAAGTATGGAACAGACTAAAAATACTCACGACCAGACCATGGTATATGATTCTTCTTCAAGGAGTATCAATGTCTCAAATGGGCCAGCAACTTTACTGGGAAAAAACAAAGAAGCAATGCAGGAATTTGGCAGAAAAGATGAGATTCATACAGGAAGAAAAATAGTATCACCCACGCAAAAAGAAACACTTATTTCCCTTGTAACTTGTGAAAGCAAAGAACAACGGAGTATTCAATGTGAATTCAGTGGTCAGAACGATCAAGAAAGAAAGTCATCTGTATTTAAGGGGGAAACATTTTGTTTCTCGCATTCTTTTCCTGAAGATAGGCGACCGCAAATCGTGGAATGGGTGAATCAAGGAGGGGGAGAGGTGGTAAATGATCCTTTGATAAATAACGCACATTTTACTATTGAATGCCATGGTGGGTTCCAAAGTACCGAGACTACCCAAACTATCTATGTCTCAAGTCATTGGGTTCGAAATTGTTTAAAGGTTGGTTGTTTACTTGCTGTTAGTAGTCATATCCTCTACTCACCTCTTCCCTGCCAGACACCTTTGCCTGGATTCGAAAGCCTTTGCATATGTAGTTCCCAACATAATGAGAAGAATGTAGAACTCCTGAGAAATTTGAGTGTCGTTCTTGGAGCAGATTTTGTGGAAAGACTAACCAGGAAAGTGACTCACTTGATATGCAACTTTGCAAAAGGAGATAAGTATGTGAGAGCTTCCAAGTGGGGAATAATTTCCGTGACACCTGACTGGCTTTATGAATGTGTTAGACAGAATCAAGTTGTTTGTACAGATAACTTCCATCCAAGGGAATTGACCACTCAAGATCGAGAAGCAGGGTCTCAGTTTCATACACAGTTTGTACCAATGGCCTCAAGGGACAGTATGTCTCTACCTGTAAGTCACTCTGAAGACAGGGAAAAAATTCAAAGTTTTGCTGGCAAAAGTGGTTGCGGGAAAGGTGAAGTATATAACAGACTTGGAGAAATTGGAAAGGAACAAACTTTTCCGTCTAAGAAGGCAAAACTTTTGAGAGATGGTCAAGAAAGTGATGTGTTTCCTGTGAGAGAACTTCCAAGCAATTGTGATCGTCCTTCGCATTCTGGAGATGGCATTGTGACTGGATATGATGTAGCAAGTGGTCGTGAAGTTCCAGATGTGGCTGATACTATTGAGGATCTGTTAGAGCAGACAAGCAAAATTCAAGATCAGAAGTCTCCTGGGAGGATTTTAGAAAAGACTCATTTTTCAACTAGTGAACAATACAACACTGGGAATCACTCTGTCACTGGCCTGTCTAGACACTGGATAAACAGGGTCCATAAGAATGACGACATGGGCAGTCCTCCAGGAGATGCAACTACTGACACTTACGGAAACTTTAGTGAGACGCAGACAGAATCACAGGTTGTTGGTTACGAGGAAGATCTTTCAGGAAGGCAGATGCTTATAGACAGAGTTAGAACACGAAGCAGCTTAACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000076 GO:0000785 GO:0001932 GO:0001934 GO:0003674 GO:0003682 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007049 GO:0008104 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009893 GO:0009987 GO:0010556 GO:0010562 GO:0010604 GO:0016043 GO:0019219 GO:0019220 GO:0019222 GO:0019899 GO:0019900 GO:0022402 GO:0022607 GO:0030174 GO:0031323 GO:0031325 GO:0031326 GO:0031399 GO:0031401 GO:0031570 GO:0032268 GO:0032270 GO:0033036 GO:0033135 GO:0033138 GO:0033260 GO:0033365 GO:0033554 GO:0033674 GO:0034502 GO:0034613 GO:0034622 GO:0034641 GO:0034645 GO:0035561 GO:0035563 GO:0042325 GO:0042327 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043549 GO:0043933 GO:0044085 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044786 GO:0045786 GO:0045859 GO:0045860 GO:0045937 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051052 GO:0051098 GO:0051099 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0051641 GO:0051716 GO:0051726 GO:0060255 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0070727 GO:0071163 GO:0071165 GO:0071168 GO:0071704 GO:0071824 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko03440 map03440
Pfam Domains
Protein Families
BRCT BRCT_2 PTCB-BRCT

Protein Analysis

972

Amino Acids

108.01

Weight (kDa)

6.64

Isoelectric Point (pI)

43.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PTCB-BRCT PF12738 181 - 234 8.4e-09 twin BRCT domain
BRCT PF00533 347 - 422 4.2e-07 BRCA1 C Terminus (BRCT) domain
PTCB-BRCT PF12738 650 - 712 1.7e-19 twin BRCT domain
BRCT PF00533 650 - 717 2.1e-07 BRCA1 C Terminus (BRCT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1405
AccB1I GGYRCC 2 cut(s) 55, 104
AccB7I CCANNNNNTGG 1 cut(s) 1462
AccI GTMKAC 1 cut(s) 259
AccII CGCG 1 cut(s) 896
AciI CCGC 7 cut(s) 227, 894, 896, 1031, 1165, 1757, 2388
AclWI GGATC 5 cut(s) 201, 1173, 1186, 1799, 2619
AcsI RAATTY 8 cut(s) 185, 582, 1110, 1547, 1664, 2050, 2358, 2634
AcuI CTGAAG 5 cut(s) 84, 711, 1218, 1764, 2364
AdeI CACNNNGTG 1 cut(s) 520
AfaI GTAC 8 cut(s) 449, 667, 991, 1057, 1094, 1861, 2224, 2298
AfiI CCNNNNNNNGG 8 cut(s) 275, 298, 557, 809, 1013, 1462, 1985, 2242
AhdI GACNNNNNGTC 1 cut(s) 2320
AhlI ACTAGT 1 cut(s) 2687
AjnI CCWGG 6 cut(s) 1006, 1061, 1984, 2093, 2653, 2782
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AluBI AGCT 9 cut(s) 97, 398, 639, 652, 947, 1133, 1271, 2150, 2910
AluI AGCT 9 cut(s) 97, 398, 639, 652, 947, 1133, 1271, 2150, 2910
Alw21I GWGCWC 2 cut(s) 516, 922
AlwI GGATC 5 cut(s) 201, 1173, 1186, 1799, 2619
AlwNI CAGNNNCTG 1 cut(s) 1274
AoxI GGCC 6 cut(s) 456, 1015, 1028, 1505, 2304, 2725
ApaI GGGCCC 1 cut(s) 460
ApeKI GCWGC 7 cut(s) 123, 440, 686, 881, 1192, 1268, 2907
ApoI RAATTY 8 cut(s) 185, 582, 1110, 1547, 1664, 2050, 2358, 2634
ArsI GACNNNNNNTTYG 2 cut(s) 709, 741
Asp700I GAANNNNTTC 4 cut(s) 870, 1231, 2167, 2358
AspLEI GCGC 1 cut(s) 238
AspS9I GGNCC 8 cut(s) 143, 224, 456, 457, 1016, 1162, 1505, 2752
AsuC2I CCSGG 1 cut(s) 1183
AsuHPI GGTGA 5 cut(s) 707, 1584, 1786, 1950, 2408
AsuII TTCGAA 2 cut(s) 1903, 1992
AvaII GGWCC 4 cut(s) 143, 224, 1162, 2752
AxyI CCTNAGG 1 cut(s) 528
BaeGI GKGCMC 1 cut(s) 460
BamHI GGATCC 1 cut(s) 1178
BanI GGYRCC 2 cut(s) 55, 104
BanII GRGCYC 1 cut(s) 460
BbsI GAAGAC 4 cut(s) 11, 61, 1086, 2352
Bbv12I GWGCWC 2 cut(s) 516, 922
BbvI GCAGC 6 cut(s) 110, 427, 673, 868, 1179, 1280
BccI CCATC 7 cut(s) 139, 296, 773, 1043, 2244, 2465, 2537
BceAI ACGGC 1 cut(s) 1038
BciT130I CCWGG 6 cut(s) 1008, 1063, 1986, 2095, 2655, 2784
BcnI CCSGG 1 cut(s) 1183
BcuI ACTAGT 1 cut(s) 2687
BfaI CTAG 5 cut(s) 293, 863, 927, 2688, 2733
BglII AGATCT 1 cut(s) 2860
BisI GCNGC 9 cut(s) 124, 441, 687, 882, 897, 1031, 1193, 1269, 2908
BlpI GCTNAGC 1 cut(s) 648
BlsI GCNGC 9 cut(s) 125, 442, 688, 883, 898, 1032, 1194, 1270, 2909
Bme1390I CCNGG 7 cut(s) 1008, 1063, 1183, 1986, 2095, 2655, 2784
Bme18I GGWCC 4 cut(s) 143, 224, 1162, 2752
BmeRI GACNNNNNGTC 1 cut(s) 2320
BmgT120I GGNCC 8 cut(s) 143, 224, 456, 457, 1016, 1162, 1505, 2752
BmrFI CCNGG 7 cut(s) 1008, 1063, 1183, 1986, 2095, 2655, 2784
BmrI ACTGGG 4 cut(s) 981, 1293, 1529, 2715
BmsI GCATC 4 cut(s) 76, 673, 2779, 2868
BmuI ACTGGG 4 cut(s) 981, 1293, 1529, 2715
BpiI GAAGAC 4 cut(s) 11, 61, 1086, 2352
BpmI CTGGAG 2 cut(s) 2559, 2766
Bpu1102I GCTNAGC 1 cut(s) 648
Bpu14I TTCGAA 2 cut(s) 1903, 1992
BpuEI CTTGAG 3 cut(s) 1873, 2241, 2293
BpuMI CCSGG 1 cut(s) 1183
Bsa29I ATCGAT 1 cut(s) 768
BsaBI GATNNNNATC 1 cut(s) 1317
BsaI GGTCTC 1 cut(s) 2280
BsaXI ACNNNNNCTCC 2 cut(s) 1782, 1812
Bsc4I CCNNNNNNNGG 8 cut(s) 275, 298, 557, 809, 1013, 1462, 1985, 2242
Bse1I ACTGG 8 cut(s) 987, 1299, 1524, 2189, 2560, 2710, 2728, 2744
Bse21I CCTNAGG 1 cut(s) 528
Bse3DI GCAATG 2 cut(s) 236, 1545
Bse8I GATNNNNATC 1 cut(s) 1317
BseBI CCWGG 6 cut(s) 1008, 1063, 1986, 2095, 2655, 2784
BseCI ATCGAT 1 cut(s) 768
BseGI GGATG 3 cut(s) 307, 1425, 2236
BseJI GATNNNNATC 1 cut(s) 1317
BseLI CCNNNNNNNGG 8 cut(s) 275, 298, 557, 809, 1013, 1462, 1985, 2242
BseMI GCAATG 2 cut(s) 236, 1545
BseMII CTCAG 6 cut(s) 542, 639, 935, 948, 2036, 2291
BseNI ACTGG 8 cut(s) 987, 1299, 1524, 2189, 2560, 2710, 2728, 2744
BseRI GAGGAG 1 cut(s) 846
BseSI GKGCMC 1 cut(s) 460
BseXI GCAGC 6 cut(s) 110, 427, 673, 868, 1179, 1280
Bsh1236I CGCG 1 cut(s) 896
Bsh1285I CGRYCG 1 cut(s) 1757
BshFI GGCC 6 cut(s) 458, 1017, 1030, 1507, 2306, 2727
BshNI GGYRCC 2 cut(s) 55, 104
BshVI ATCGAT 1 cut(s) 768
BsiEI CGRYCG 1 cut(s) 1757
BsiHKAI GWGCWC 2 cut(s) 516, 922
BsiSI CCGG 1 cut(s) 1183
BslFI GGGAC 2 cut(s) 129, 2327
BslI CCNNNNNNNGG 8 cut(s) 275, 298, 557, 809, 1013, 1462, 1985, 2242
BsmBI CGTCTC 1 cut(s) 2816
BsmFI GGGAC 2 cut(s) 129, 2327
BsmI GAATGC 3 cut(s) 1732, 1844, 2533
BsnI GGCC 6 cut(s) 458, 1017, 1030, 1507, 2306, 2727
Bso31I GGTCTC 1 cut(s) 2280
Bsp119I TTCGAA 2 cut(s) 1903, 1992
Bsp120I GGGCCC 1 cut(s) 456
Bsp1286I GDGCHC 3 cut(s) 460, 516, 922
Bsp1407I TGTACA 2 cut(s) 665, 2222
Bsp1720I GCTNAGC 1 cut(s) 648
Bsp19I CCATGG 4 cut(s) 297, 372, 1461, 1843
BspACI CCGC 7 cut(s) 227, 894, 896, 1031, 1165, 1757, 2388
BspANI GGCC 6 cut(s) 458, 1017, 1030, 1507, 2306, 2727
BspCNI CTCAG 6 cut(s) 541, 640, 934, 947, 2037, 2290
BspDI ATCGAT 1 cut(s) 768
BspFNI CGCG 1 cut(s) 896
BspHI TCATGA 1 cut(s) 178
BspPI GGATC 5 cut(s) 201, 1173, 1186, 1799, 2619
BspQI GCTCTTC 1 cut(s) 245
BspT104I TTCGAA 2 cut(s) 1903, 1992
BspT107I GGYRCC 2 cut(s) 55, 104
BspTNI GGTCTC 1 cut(s) 2280
BsrDI GCAATG 2 cut(s) 236, 1545
BsrGI TGTACA 2 cut(s) 665, 2222
BsrI ACTGG 8 cut(s) 987, 1299, 1524, 2189, 2560, 2710, 2728, 2744
BssT1I CCWWGG 7 cut(s) 204, 297, 372, 1401, 1461, 1843, 2240
Bst2UI CCWGG 6 cut(s) 1008, 1063, 1986, 2095, 2655, 2784
Bst4CI ACNGT 5 cut(s) 18, 104, 518, 2292, 2318
Bst6I CTCTTC 3 cut(s) 245, 786, 1968
BstAUI TGTACA 2 cut(s) 665, 2222
BstBI TTCGAA 2 cut(s) 1903, 1992
BstC8I GCNNGC 3 cut(s) 1393, 1509, 2374
BstDEI CTNAG 8 cut(s) 528, 648, 921, 934, 1155, 2045, 2277, 2448
BstDSI CCRYGG 5 cut(s) 297, 372, 894, 1461, 1843
BstF5I GGATG 3 cut(s) 307, 1425, 2236
BstFNI CGCG 1 cut(s) 896
BstHHI GCGC 1 cut(s) 238
BstMCI CGRYCG 1 cut(s) 1757
BstMWI GCNNNNNNNGC 5 cut(s) 235, 686, 887, 896, 1036
BstNI CCWGG 6 cut(s) 1008, 1063, 1986, 2095, 2655, 2784
BstNSI RCATGY 1 cut(s) 1395
BstSCI CCNGG 7 cut(s) 1006, 1061, 1181, 1984, 2093, 2653, 2782
BstSLI GKGCMC 1 cut(s) 460
BstUI CGCG 1 cut(s) 896
BstV1I GCAGC 6 cut(s) 110, 427, 673, 868, 1179, 1280
BstV2I GAAGAC 4 cut(s) 11, 61, 1086, 2352
BstX2I RGATCY 4 cut(s) 193, 1178, 2611, 2860
BstYI RGATCY 4 cut(s) 193, 1178, 2611, 2860
Bsu15I ATCGAT 1 cut(s) 768
Bsu36I CCTNAGG 1 cut(s) 528
BsuRI GGCC 6 cut(s) 458, 1017, 1030, 1507, 2306, 2727
BsuTUI ATCGAT 1 cut(s) 768
BtgI CCRYGG 5 cut(s) 297, 372, 894, 1461, 1843
BtgZI GCGATG 1 cut(s) 148
BtsCI GGATG 3 cut(s) 307, 1425, 2236
BtsI GCAGTG 1 cut(s) 263
BtsIMutI CAGTG 5 cut(s) 263, 1675, 2703, 2721, 2737
Cac8I GCNNGC 3 cut(s) 1393, 1509, 2374
CaiI CAGNNNCTG 1 cut(s) 1274
CciI TCATGA 1 cut(s) 178
CfoI GCGC 1 cut(s) 238
Cfr13I GGNCC 8 cut(s) 143, 224, 456, 457, 1016, 1162, 1505, 2752
Cfr42I CCGCGG 1 cut(s) 897
ClaI ATCGAT 1 cut(s) 768
CseI GACGC 3 cut(s) 19, 879, 2833
CsiI ACCWGGT 1 cut(s) 1006
Csp6I GTAC 8 cut(s) 448, 666, 990, 1056, 1093, 1860, 2223, 2297
CviAII CATG 8 cut(s) 158, 179, 298, 373, 1392, 1462, 1844, 2770
CviQI GTAC 8 cut(s) 448, 666, 990, 1056, 1093, 1860, 2223, 2297
DdeI CTNAG 8 cut(s) 528, 648, 921, 934, 1155, 2045, 2277, 2448
DraI TTTAAA 1 cut(s) 1914
DraIII CACNNNGTG 1 cut(s) 520
DrdI GACNNNNNNGTC 1 cut(s) 1405
DriI GACNNNNNGTC 1 cut(s) 2320
DseDI GACNNNNNNGTC 1 cut(s) 1405
Eam1104I CTCTTC 3 cut(s) 245, 786, 1968
Eam1105I GACNNNNNGTC 1 cut(s) 2320
EarI CTCTTC 3 cut(s) 245, 786, 1968
Eco130I CCWWGG 7 cut(s) 204, 297, 372, 1401, 1461, 1843, 2240
Eco24I GRGCYC 1 cut(s) 460
Eco31I GGTCTC 1 cut(s) 2280
Eco47I GGWCC 4 cut(s) 143, 224, 1162, 2752
Eco57I CTGAAG 5 cut(s) 84, 711, 1218, 1764, 2364
Eco81I CCTNAGG 1 cut(s) 528
EcoO109I RGGNCCY 1 cut(s) 457
EcoRI GAATTC 2 cut(s) 582, 1664
EcoRII CCWGG 6 cut(s) 1006, 1061, 1984, 2093, 2653, 2782
EcoT14I CCWWGG 7 cut(s) 204, 297, 372, 1401, 1461, 1843, 2240
EcoT38I GRGCYC 1 cut(s) 460
ErhI CCWWGG 7 cut(s) 204, 297, 372, 1401, 1461, 1843, 2240
Esp3I CGTCTC 1 cut(s) 2816
FaeI CATG 8 cut(s) 161, 182, 301, 376, 1395, 1465, 1847, 2773
FalI AAGNNNNNCTT 2 cut(s) 1596, 1628
FaqI GGGAC 2 cut(s) 129, 2327
FatI CATG 8 cut(s) 157, 178, 297, 372, 1391, 1461, 1843, 2769
FauI CCCGC 1 cut(s) 2381
FauNDI CATATG 2 cut(s) 907, 2006
FblI GTMKAC 1 cut(s) 259
Fnu4HI GCNGC 9 cut(s) 124, 441, 687, 882, 897, 1031, 1193, 1269, 2908
FokI GGATG 3 cut(s) 314, 1432, 2223
FriOI GRGCYC 1 cut(s) 460
Fsp4HI GCNGC 9 cut(s) 124, 441, 687, 882, 897, 1031, 1193, 1269, 2908
FspBI CTAG 5 cut(s) 293, 863, 927, 2688, 2733
GlaI GCGC 1 cut(s) 237
GluI GCNGC 9 cut(s) 124, 441, 687, 882, 897, 1031, 1193, 1269, 2908
GsuI CTGGAG 2 cut(s) 2559, 2766
HaeIII GGCC 6 cut(s) 458, 1017, 1030, 1507, 2306, 2727
HapII CCGG 1 cut(s) 1183
HgaI GACGC 3 cut(s) 19, 879, 2833
HhaI GCGC 1 cut(s) 238
Hin1II CATG 8 cut(s) 161, 182, 301, 376, 1395, 1465, 1847, 2773
Hin6I GCGC 1 cut(s) 236
HinP1I GCGC 1 cut(s) 236
HindIII AAGCTT 3 cut(s) 95, 945, 1131
HpaII CCGG 1 cut(s) 1183
HphI GGTGA 5 cut(s) 707, 1584, 1786, 1950, 2408
Hpy166II GTNNAC 6 cut(s) 260, 412, 668, 1148, 1928, 2693
Hpy8I GTNNAC 6 cut(s) 260, 412, 668, 1148, 1928, 2693
Hpy99I CGWCG 1 cut(s) 13
HpyAV CCTTC 7 cut(s) 337, 686, 885, 1242, 2446, 2538, 2865
HpyCH4III ACNGT 5 cut(s) 18, 104, 518, 2292, 2318
HpyF10VI GCNNNNNNNGC 5 cut(s) 235, 686, 887, 896, 1036
HpyF3I CTNAG 8 cut(s) 528, 648, 921, 934, 1155, 2045, 2277, 2448
Hsp92II CATG 8 cut(s) 161, 182, 301, 376, 1395, 1465, 1847, 2773
HspAI GCGC 1 cut(s) 236
KspI CCGCGG 1 cut(s) 897
LguI GCTCTTC 1 cut(s) 245
LmnI GCTCC 2 cut(s) 636, 2069
Lsp1109I GCAGC 6 cut(s) 110, 427, 673, 868, 1179, 1280
LweI GCATC 4 cut(s) 76, 673, 2779, 2868
MabI ACCWGGT 1 cut(s) 1006
MaeI CTAG 5 cut(s) 293, 863, 927, 2688, 2733
MfeI CAATTG 1 cut(s) 2515
MflI RGATCY 4 cut(s) 193, 1178, 2611, 2860
MhlI GDGCHC 3 cut(s) 460, 516, 922
MlyI GAGTC 5 cut(s) 803, 926, 1204, 2098, 2668
MmeI TCCRAC 2 cut(s) 485, 1204
MroXI GAANNNNTTC 4 cut(s) 870, 1231, 2167, 2358
MseI TTAA 9 cut(s) 99, 189, 198, 218, 999, 1197, 1707, 1913, 2912
MslI CAYNNNNRTG 3 cut(s) 748, 977, 2760
MspA1I CMGCKG 1 cut(s) 896
MspI CCGG 1 cut(s) 1183
MspR9I CCNGG 7 cut(s) 1008, 1063, 1183, 1986, 2095, 2655, 2784
MunI CAATTG 1 cut(s) 2515
Mva1269I GAATGC 3 cut(s) 1732, 1844, 2533
MvaI CCWGG 6 cut(s) 1008, 1063, 1986, 2095, 2655, 2784
MvnI CGCG 1 cut(s) 896
MwoI GCNNNNNNNGC 5 cut(s) 235, 686, 887, 896, 1036
NciI CCSGG 1 cut(s) 1183
NcoI CCATGG 4 cut(s) 297, 372, 1461, 1843
NdeI CATATG 2 cut(s) 907, 2006
NlaIII CATG 8 cut(s) 161, 182, 301, 376, 1395, 1465, 1847, 2773
NmuCI GTSAC 9 cut(s) 574, 695, 725, 739, 2101, 2173, 2336, 2551, 2719
NspI RCATGY 1 cut(s) 1395
NspV TTCGAA 2 cut(s) 1903, 1992
PaeI GCATGC 1 cut(s) 1395
PagI TCATGA 1 cut(s) 178
PciSI GCTCTTC 1 cut(s) 245
PcsI WCGNNNNNNNCGW 1 cut(s) 171
PctI GAATGC 3 cut(s) 1732, 1844, 2533
PdmI GAANNNNTTC 4 cut(s) 870, 1231, 2167, 2358
PflMI CCANNNNNTGG 1 cut(s) 1462
PfoI TCCNGGA 1 cut(s) 2782
PkrI GCNGC 9 cut(s) 125, 442, 688, 883, 898, 1032, 1194, 1270, 2909
PleI GAGTC 5 cut(s) 802, 926, 1204, 2098, 2668
PpsI GAGTC 5 cut(s) 802, 926, 1204, 2098, 2668
Psp6I CCWGG 6 cut(s) 1006, 1061, 1984, 2093, 2653, 2782
PspGI CCWGG 6 cut(s) 1006, 1061, 1984, 2093, 2653, 2782
PspOMI GGGCCC 1 cut(s) 456
PspPI GGNCC 8 cut(s) 143, 224, 456, 457, 1016, 1162, 1505, 2752
PstNI CAGNNNCTG 1 cut(s) 1274
PsuI RGATCY 4 cut(s) 193, 1178, 2611, 2860
RsaI GTAC 8 cut(s) 449, 667, 991, 1057, 1094, 1861, 2224, 2298
RsaNI GTAC 8 cut(s) 448, 666, 990, 1056, 1093, 1860, 2223, 2297
RseI CAYNNNNRTG 3 cut(s) 748, 977, 2760
SacII CCGCGG 1 cut(s) 897
SapI GCTCTTC 1 cut(s) 245
SaqAI TTAA 9 cut(s) 99, 189, 198, 218, 999, 1197, 1707, 1913, 2912
SatI GCNGC 9 cut(s) 124, 441, 687, 882, 897, 1031, 1193, 1269, 2908
Sau96I GGNCC 8 cut(s) 143, 224, 456, 457, 1016, 1162, 1505, 2752
SchI GAGTC 5 cut(s) 803, 926, 1204, 2098, 2668
ScrFI CCNGG 7 cut(s) 1008, 1063, 1183, 1986, 2095, 2655, 2784
SduI GDGCHC 3 cut(s) 460, 516, 922
SexAI ACCWGGT 1 cut(s) 1006
SfaNI GCATC 4 cut(s) 76, 673, 2779, 2868
Sfr303I CCGCGG 1 cut(s) 897
SfuI TTCGAA 2 cut(s) 1903, 1992
SgrBI CCGCGG 1 cut(s) 897
SinI GGWCC 4 cut(s) 143, 224, 1162, 2752
SmiMI CAYNNNNRTG 3 cut(s) 748, 977, 2760
SmlI CTYRAG 3 cut(s) 1888, 2256, 2308
SmoI CTYRAG 3 cut(s) 1888, 2256, 2308
SpeI ACTAGT 1 cut(s) 2687
SphI GCATGC 1 cut(s) 1395
SsiI CCGC 7 cut(s) 227, 894, 896, 1031, 1165, 1757, 2388
SspMI CTAG 5 cut(s) 293, 863, 927, 2688, 2733
StyD4I CCNGG 7 cut(s) 1006, 1061, 1181, 1984, 2093, 2653, 2782
StyI CCWWGG 7 cut(s) 204, 297, 372, 1401, 1461, 1843, 2240
TaaI ACNGT 5 cut(s) 18, 104, 518, 2292, 2318
TaqI TCGA 7 cut(s) 72, 84, 715, 768, 1903, 1992, 2263
TatI WGTACW 5 cut(s) 447, 665, 1055, 1092, 2222
TauI GCSGC 2 cut(s) 899, 1033
Tru1I TTAA 9 cut(s) 99, 189, 198, 218, 999, 1197, 1707, 1913, 2912
Tru9I TTAA 9 cut(s) 99, 189, 198, 218, 999, 1197, 1707, 1913, 2912
TscAI CASTG 5 cut(s) 270, 1675, 2710, 2728, 2744
TseFI GTSAC 9 cut(s) 574, 695, 725, 739, 2101, 2173, 2336, 2551, 2719
TseI GCWGC 7 cut(s) 123, 440, 686, 881, 1192, 1268, 2907
Tsp45I GTSAC 9 cut(s) 574, 695, 725, 739, 2101, 2173, 2336, 2551, 2719
TspGWI ACGGA 5 cut(s) 760, 1663, 2161, 2433, 2823
TspRI CASTG 5 cut(s) 270, 1675, 2710, 2728, 2744
Van91I CCANNNNNTGG 1 cut(s) 1462
VpaK11BI GGWCC 4 cut(s) 143, 224, 1162, 2752
XapI RAATTY 8 cut(s) 185, 582, 1110, 1547, 1664, 2050, 2358, 2634
XbaI TCTAGA 3 cut(s) 862, 926, 2732
XceI RCATGY 1 cut(s) 1395
XmiI GTMKAC 1 cut(s) 259
XmnI GAANNNNTTC 4 cut(s) 870, 1231, 2167, 2358
XspI CTAG 5 cut(s) 293, 863, 927, 2688, 2733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.