HPC2 and ubinuclein domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G77310 AT1G77310 |
| fragaria_vesca | FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 |
| malus_domestica | MD08G1159200.v1.1 |
| prunus_persica | Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 |
| pyrus_communis | pycom348g00040 |
| rosa_chinensis | RchiOBHm_Chr6g0293421 RchiOBHm_Chr6g0296701 |
| rosa_laevigata | RLG00000011667 RLG00000011669 |
| rosa_multiflora | Rmu_sc0001741.1_g000003 Rmu_sc0001741.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00171250 |
| rosa_rugosa | Rorug06G0264500 Rorug06G0264600 Rorug06G0264700 |
| rosa_samantha | Rh6AG376100 Rh6BG384400 Rh6CG362400 Rh6CG389500 Rh6CG389700 Rh6DG376900 |
| rosa_wichuraiana | Rw6G032880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 31 |
| AccB1I | GGYRCC | 1 cut(s) | 1365 |
| AccI | GTMKAC | 1 cut(s) | 985 |
| AciI | CCGC | 5 cut(s) | 164, 168, 627, 1260, 1398 |
| AclWI | GGATC | 5 cut(s) | 1039, 1052, 1223, 1236, 1440 |
| AcsI | RAATTY | 1 cut(s) | 713 |
| AcvI | CACGTG | 1 cut(s) | 592 |
| AfaI | GTAC | 2 cut(s) | 240, 1085 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 66, 334 |
| AgsI | TTSAA | 4 cut(s) | 440, 730, 799, 1166 |
| AhlI | ACTAGT | 1 cut(s) | 1442 |
| AjnI | CCWGG | 2 cut(s) | 116, 211 |
| AluBI | AGCT | 6 cut(s) | 88, 127, 233, 284, 1009, 1395 |
| AluI | AGCT | 6 cut(s) | 88, 127, 233, 284, 1009, 1395 |
| Alw21I | GWGCWC | 2 cut(s) | 90, 1442 |
| Alw26I | GTCTC | 4 cut(s) | 95, 118, 228, 1313 |
| AlwI | GGATC | 5 cut(s) | 1039, 1052, 1223, 1236, 1440 |
| Ama87I | CYCGRG | 3 cut(s) | 31, 218, 886 |
| AoxI | GGCC | 6 cut(s) | 15, 19, 35, 154, 214, 487 |
| ApeKI | GCWGC | 5 cut(s) | 170, 284, 515, 629, 1395 |
| ApoI | RAATTY | 1 cut(s) | 713 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 458, 490 |
| AspLEI | GCGC | 2 cut(s) | 289, 327 |
| AspS9I | GGNCC | 4 cut(s) | 20, 36, 487, 915 |
| AsuC2I | CCSGG | 1 cut(s) | 96 |
| AsuHPI | GGTGA | 4 cut(s) | 200, 850, 1287, 1412 |
| AsuNHI | GCTAGC | 1 cut(s) | 1391 |
| AvaI | CYCGRG | 3 cut(s) | 31, 218, 886 |
| AvaII | GGWCC | 1 cut(s) | 915 |
| AxyI | CCTNAGG | 1 cut(s) | 879 |
| BamHI | GGATCC | 2 cut(s) | 1044, 1228 |
| BanI | GGYRCC | 1 cut(s) | 1365 |
| BanII | GRGCYC | 3 cut(s) | 90, 569, 1349 |
| BbrPI | CACGTG | 1 cut(s) | 592 |
| Bbv12I | GWGCWC | 2 cut(s) | 90, 1442 |
| BbvI | GCAGC | 5 cut(s) | 157, 271, 502, 641, 1382 |
| BccI | CCATC | 2 cut(s) | 803, 1397 |
| BciT130I | CCWGG | 2 cut(s) | 118, 213 |
| BciVI | GTATCC | 1 cut(s) | 1219 |
| BcnI | CCSGG | 1 cut(s) | 96 |
| BcoDI | GTCTC | 4 cut(s) | 95, 118, 228, 1313 |
| BcuI | ACTAGT | 1 cut(s) | 1442 |
| BfaI | CTAG | 5 cut(s) | 141, 494, 1392, 1413, 1443 |
| BfmI | CTRYAG | 1 cut(s) | 1303 |
| BfoI | RGCGCY | 1 cut(s) | 328 |
| BfuI | GTATCC | 1 cut(s) | 1219 |
| BisI | GCNGC | 6 cut(s) | 171, 285, 516, 627, 630, 1396 |
| BlsI | GCNGC | 6 cut(s) | 172, 286, 517, 628, 631, 1397 |
| BmcAI | AGTACT | 1 cut(s) | 1085 |
| Bme1390I | CCNGG | 3 cut(s) | 96, 118, 213 |
| Bme18I | GGWCC | 1 cut(s) | 915 |
| BmeT110I | CYCGRG | 3 cut(s) | 31, 218, 886 |
| BmgT120I | GGNCC | 4 cut(s) | 20, 36, 487, 915 |
| BmiI | GGNNCC | 7 cut(s) | 22, 488, 916, 1046, 1230, 1348, 1367 |
| BmrFI | CCNGG | 3 cut(s) | 96, 118, 213 |
| BmrI | ACTGGG | 1 cut(s) | 970 |
| BmsI | GCATC | 5 cut(s) | 406, 805, 895, 913, 935 |
| BmtI | GCTAGC | 1 cut(s) | 1395 |
| BmuI | ACTGGG | 1 cut(s) | 970 |
| BpmI | CTGGAG | 1 cut(s) | 270 |
| BpuMI | CCSGG | 1 cut(s) | 96 |
| BsaAI | YACGTR | 1 cut(s) | 592 |
| BsaBI | GATNNNNATC | 2 cut(s) | 360, 381 |
| BsaI | GGTCTC | 1 cut(s) | 95 |
| BsaJI | CCNNGG | 2 cut(s) | 211, 690 |
| BsaWI | WCCGGW | 2 cut(s) | 235, 737 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 1429 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 66, 334 |
| Bse118I | RCCGGY | 4 cut(s) | 17, 59, 66, 908 |
| Bse1I | ACTGG | 1 cut(s) | 976 |
| Bse21I | CCTNAGG | 1 cut(s) | 879 |
| Bse8I | GATNNNNATC | 2 cut(s) | 360, 381 |
| BseBI | CCWGG | 2 cut(s) | 118, 213 |
| BseDI | CCNNGG | 2 cut(s) | 211, 690 |
| BseGI | GGATG | 3 cut(s) | 433, 746, 814 |
| BseJI | GATNNNNATC | 2 cut(s) | 360, 381 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 66, 334 |
| BseMII | CTCAG | 2 cut(s) | 387, 411 |
| BseNI | ACTGG | 1 cut(s) | 976 |
| BseRI | GAGGAG | 1 cut(s) | 1367 |
| BseXI | GCAGC | 5 cut(s) | 157, 271, 502, 641, 1382 |
| BsgI | GTGCAG | 2 cut(s) | 807, 1344 |
| Bsh1285I | CGRYCG | 1 cut(s) | 67 |
| BshFI | GGCC | 6 cut(s) | 17, 21, 37, 156, 216, 489 |
| BshNI | GGYRCC | 1 cut(s) | 1365 |
| BsiEI | CGRYCG | 1 cut(s) | 67 |
| BsiHKAI | GWGCWC | 2 cut(s) | 90, 1442 |
| BsiHKCI | CYCGRG | 3 cut(s) | 31, 218, 886 |
| BsiSI | CCGG | 7 cut(s) | 18, 60, 67, 96, 236, 738, 909 |
| BslFI | GGGAC | 2 cut(s) | 149, 660 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 66, 334 |
| BsmAI | GTCTC | 4 cut(s) | 95, 118, 228, 1313 |
| BsmFI | GGGAC | 2 cut(s) | 149, 660 |
| BsnI | GGCC | 6 cut(s) | 17, 21, 37, 156, 216, 489 |
| Bso31I | GGTCTC | 1 cut(s) | 95 |
| BsoBI | CYCGRG | 3 cut(s) | 31, 218, 886 |
| Bsp1286I | GDGCHC | 4 cut(s) | 90, 569, 1349, 1442 |
| Bsp143I | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| BspACI | CCGC | 5 cut(s) | 164, 168, 627, 1260, 1398 |
| BspANI | GGCC | 6 cut(s) | 17, 21, 37, 156, 216, 489 |
| BspCNI | CTCAG | 2 cut(s) | 388, 412 |
| BspHI | TCATGA | 1 cut(s) | 943 |
| BspLI | GGNNCC | 7 cut(s) | 22, 488, 916, 1046, 1230, 1348, 1367 |
| BspOI | GCTAGC | 1 cut(s) | 1395 |
| BspPI | GGATC | 5 cut(s) | 1039, 1052, 1223, 1236, 1440 |
| BspT107I | GGYRCC | 1 cut(s) | 1365 |
| BspTNI | GGTCTC | 1 cut(s) | 95 |
| BsrFI | RCCGGY | 4 cut(s) | 17, 59, 66, 908 |
| BsrI | ACTGG | 1 cut(s) | 976 |
| BssAI | RCCGGY | 4 cut(s) | 17, 59, 66, 908 |
| BssECI | CCNNGG | 2 cut(s) | 211, 690 |
| BssMI | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| Bst2UI | CCWGG | 2 cut(s) | 118, 213 |
| Bst4CI | ACNGT | 5 cut(s) | 82, 587, 701, 778, 1239 |
| Bst6I | CTCTTC | 2 cut(s) | 739, 1443 |
| BstBAI | YACGTR | 1 cut(s) | 592 |
| BstC8I | GCNNGC | 7 cut(s) | 19, 61, 158, 168, 831, 1327, 1393 |
| BstDEI | CTNAG | 5 cut(s) | 396, 420, 858, 879, 1224 |
| BstDSI | CCRYGG | 1 cut(s) | 690 |
| BstF5I | GGATG | 3 cut(s) | 433, 746, 814 |
| BstH2I | RGCGCY | 1 cut(s) | 328 |
| BstHHI | GCGC | 2 cut(s) | 289, 327 |
| BstKTI | GATC | 6 cut(s) | 364, 385, 1047, 1173, 1231, 1435 |
| BstMAI | GTCTC | 4 cut(s) | 95, 118, 228, 1313 |
| BstMBI | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| BstMCI | CGRYCG | 1 cut(s) | 67 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 176, 830, 1331 |
| BstNI | CCWGG | 2 cut(s) | 118, 213 |
| BstSCI | CCNGG | 3 cut(s) | 94, 116, 211 |
| BstSFI | CTRYAG | 1 cut(s) | 1303 |
| BstV1I | GCAGC | 5 cut(s) | 157, 271, 502, 641, 1382 |
| BstX2I | RGATCY | 2 cut(s) | 1044, 1228 |
| BstYI | RGATCY | 2 cut(s) | 1044, 1228 |
| Bsu36I | CCTNAGG | 1 cut(s) | 879 |
| BsuI | GTATCC | 1 cut(s) | 1219 |
| BsuRI | GGCC | 6 cut(s) | 17, 21, 37, 156, 216, 489 |
| BtgI | CCRYGG | 1 cut(s) | 690 |
| BtsCI | GGATG | 3 cut(s) | 433, 746, 814 |
| BtsI | GCAGTG | 3 cut(s) | 174, 180, 824 |
| BtsIMutI | CAGTG | 3 cut(s) | 174, 180, 824 |
| Cac8I | GCNNGC | 7 cut(s) | 19, 61, 158, 168, 831, 1327, 1393 |
| CciI | TCATGA | 1 cut(s) | 943 |
| CfoI | GCGC | 2 cut(s) | 289, 327 |
| Cfr10I | RCCGGY | 4 cut(s) | 17, 59, 66, 908 |
| Cfr13I | GGNCC | 4 cut(s) | 20, 36, 487, 915 |
| Csp6I | GTAC | 2 cut(s) | 239, 1084 |
| CviAII | CATG | 2 cut(s) | 464, 944 |
| CviQI | GTAC | 2 cut(s) | 239, 1084 |
| DdeI | CTNAG | 5 cut(s) | 396, 420, 858, 879, 1224 |
| DpnI | GATC | 6 cut(s) | 363, 384, 1046, 1172, 1230, 1434 |
| DpnII | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| DraI | TTTAAA | 1 cut(s) | 901 |
| Eam1104I | CTCTTC | 2 cut(s) | 739, 1443 |
| EarI | CTCTTC | 2 cut(s) | 739, 1443 |
| EciI | GGCGGA | 1 cut(s) | 153 |
| Ecl136II | GAGCTC | 1 cut(s) | 88 |
| Eco24I | GRGCYC | 3 cut(s) | 90, 569, 1349 |
| Eco31I | GGTCTC | 1 cut(s) | 95 |
| Eco47I | GGWCC | 1 cut(s) | 915 |
| Eco53kI | GAGCTC | 1 cut(s) | 88 |
| Eco72I | CACGTG | 1 cut(s) | 592 |
| Eco81I | CCTNAGG | 1 cut(s) | 879 |
| Eco88I | CYCGRG | 3 cut(s) | 31, 218, 886 |
| EcoICRI | GAGCTC | 1 cut(s) | 88 |
| EcoO109I | RGGNCCY | 2 cut(s) | 36, 915 |
| EcoRII | CCWGG | 2 cut(s) | 116, 211 |
| EcoT22I | ATGCAT | 1 cut(s) | 928 |
| EcoT38I | GRGCYC | 3 cut(s) | 90, 569, 1349 |
| FaeI | CATG | 2 cut(s) | 467, 947 |
| FaqI | GGGAC | 2 cut(s) | 149, 660 |
| FatI | CATG | 2 cut(s) | 463, 943 |
| FauI | CCCGC | 1 cut(s) | 175 |
| FblI | GTMKAC | 1 cut(s) | 985 |
| Fnu4HI | GCNGC | 6 cut(s) | 171, 285, 516, 627, 630, 1396 |
| FokI | GGATG | 3 cut(s) | 440, 733, 821 |
| FriOI | GRGCYC | 3 cut(s) | 90, 569, 1349 |
| FseI | GGCCGGCC | 1 cut(s) | 21 |
| Fsp4HI | GCNGC | 6 cut(s) | 171, 285, 516, 627, 630, 1396 |
| FspBI | CTAG | 5 cut(s) | 141, 494, 1392, 1413, 1443 |
| GlaI | GCGC | 2 cut(s) | 288, 326 |
| GluI | GCNGC | 6 cut(s) | 171, 285, 516, 627, 630, 1396 |
| GsuI | CTGGAG | 1 cut(s) | 270 |
| HaeII | RGCGCY | 1 cut(s) | 328 |
| HaeIII | GGCC | 6 cut(s) | 17, 21, 37, 156, 216, 489 |
| HapII | CCGG | 7 cut(s) | 18, 60, 67, 96, 236, 738, 909 |
| HhaI | GCGC | 2 cut(s) | 289, 327 |
| Hin1II | CATG | 2 cut(s) | 467, 947 |
| Hin6I | GCGC | 2 cut(s) | 287, 325 |
| HinP1I | GCGC | 2 cut(s) | 287, 325 |
| HincII | GTYRAC | 3 cut(s) | 481, 1052, 1275 |
| HindII | GTYRAC | 3 cut(s) | 481, 1052, 1275 |
| HpaI | GTTAAC | 1 cut(s) | 481 |
| HpaII | CCGG | 7 cut(s) | 18, 60, 67, 96, 236, 738, 909 |
| HphI | GGTGA | 4 cut(s) | 200, 850, 1287, 1412 |
| Hpy166II | GTNNAC | 5 cut(s) | 78, 481, 986, 1052, 1275 |
| Hpy188I | TCNGA | 5 cut(s) | 92, 720, 922, 1075, 1437 |
| Hpy188III | TCNNGA | 6 cut(s) | 249, 374, 645, 864, 944, 1174 |
| Hpy8I | GTNNAC | 5 cut(s) | 78, 481, 986, 1052, 1275 |
| Hpy99I | CGWCG | 5 cut(s) | 356, 1239, 1344, 1385, 1388 |
| HpyAV | CCTTC | 6 cut(s) | 7, 255, 263, 798, 835, 1171 |
| HpyCH4III | ACNGT | 5 cut(s) | 82, 587, 701, 778, 1239 |
| HpyCH4IV | ACGT | 1 cut(s) | 591 |
| HpyCH4V | TGCA | 6 cut(s) | 518, 653, 824, 829, 926, 1325 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 176, 830, 1331 |
| HpyF3I | CTNAG | 5 cut(s) | 396, 420, 858, 879, 1224 |
| HpySE526I | ACGT | 1 cut(s) | 591 |
| Hsp92II | CATG | 2 cut(s) | 467, 947 |
| HspAI | GCGC | 2 cut(s) | 287, 325 |
| KroI | GCCGGC | 2 cut(s) | 17, 59 |
| KroNI | GCCGGC | 2 cut(s) | 19, 61 |
| KspAI | GTTAAC | 1 cut(s) | 481 |
| Kzo9I | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| LmnI | GCTCC | 6 cut(s) | 85, 93, 238, 1352, 1359, 1437 |
| Lsp1109I | GCAGC | 5 cut(s) | 157, 271, 502, 641, 1382 |
| LweI | GCATC | 5 cut(s) | 406, 805, 895, 913, 935 |
| MaeI | CTAG | 5 cut(s) | 141, 494, 1392, 1413, 1443 |
| MaeII | ACGT | 1 cut(s) | 591 |
| MaeIII | GTNAC | 2 cut(s) | 587, 685 |
| MalI | GATC | 6 cut(s) | 363, 384, 1046, 1172, 1230, 1434 |
| MboI | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| MboII | GAAGA | 6 cut(s) | 133, 328, 371, 561, 716, 726 |
| MflI | RGATCY | 2 cut(s) | 1044, 1228 |
| MhlI | GDGCHC | 4 cut(s) | 90, 569, 1349, 1442 |
| MluCI | AATT | 3 cut(s) | 448, 713, 1371 |
| MlyI | GAGTC | 4 cut(s) | 230, 395, 878, 1229 |
| MmeI | TCCRAC | 3 cut(s) | 115, 405, 1118 |
| Mph1103I | ATGCAT | 1 cut(s) | 928 |
| MroNI | GCCGGC | 2 cut(s) | 17, 59 |
| MseI | TTAA | 5 cut(s) | 480, 900, 1065, 1109, 1197 |
| MspA1I | CMGCKG | 1 cut(s) | 170 |
| MspI | CCGG | 7 cut(s) | 18, 60, 67, 96, 236, 738, 909 |
| MspR9I | CCNGG | 3 cut(s) | 96, 118, 213 |
| MvaI | CCWGG | 2 cut(s) | 118, 213 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 176, 830, 1331 |
| NaeI | GCCGGC | 2 cut(s) | 19, 61 |
| NciI | CCSGG | 1 cut(s) | 96 |
| NdeII | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| NgoMIV | GCCGGC | 2 cut(s) | 17, 59 |
| NheI | GCTAGC | 1 cut(s) | 1391 |
| NlaIII | CATG | 2 cut(s) | 467, 947 |
| NlaIV | GGNNCC | 7 cut(s) | 22, 488, 916, 1046, 1230, 1348, 1367 |
| NmuCI | GTSAC | 1 cut(s) | 587 |
| NsiI | ATGCAT | 1 cut(s) | 928 |
| PaeR7I | CTCGAG | 3 cut(s) | 31, 218, 886 |
| PagI | TCATGA | 1 cut(s) | 943 |
| PdiI | GCCGGC | 2 cut(s) | 19, 61 |
| PfeI | GAWTC | 8 cut(s) | 26, 292, 471, 721, 767, 784, 867, 1013 |
| PfoI | TCCNGGA | 1 cut(s) | 116 |
| PkrI | GCNGC | 6 cut(s) | 172, 286, 517, 628, 631, 1397 |
| PleI | GAGTC | 4 cut(s) | 229, 395, 878, 1228 |
| PmaCI | CACGTG | 1 cut(s) | 592 |
| PmlI | CACGTG | 1 cut(s) | 592 |
| PpsI | GAGTC | 4 cut(s) | 229, 395, 878, 1228 |
| Ppu21I | YACGTR | 1 cut(s) | 592 |
| PpuMI | RGGWCCY | 1 cut(s) | 915 |
| Psp124BI | GAGCTC | 1 cut(s) | 90 |
| Psp5II | RGGWCCY | 1 cut(s) | 915 |
| Psp6I | CCWGG | 2 cut(s) | 116, 211 |
| PspCI | CACGTG | 1 cut(s) | 592 |
| PspGI | CCWGG | 2 cut(s) | 116, 211 |
| PspN4I | GGNNCC | 7 cut(s) | 22, 488, 916, 1046, 1230, 1348, 1367 |
| PspPI | GGNCC | 4 cut(s) | 20, 36, 487, 915 |
| PspPPI | RGGWCCY | 1 cut(s) | 915 |
| PspXI | VCTCGAGB | 3 cut(s) | 31, 218, 886 |
| PsuI | RGATCY | 2 cut(s) | 1044, 1228 |
| RigI | GGCCGGCC | 1 cut(s) | 21 |
| RsaI | GTAC | 2 cut(s) | 240, 1085 |
| RsaNI | GTAC | 2 cut(s) | 239, 1084 |
| SacI | GAGCTC | 1 cut(s) | 90 |
| SaqAI | TTAA | 5 cut(s) | 480, 900, 1065, 1109, 1197 |
| SatI | GCNGC | 6 cut(s) | 171, 285, 516, 627, 630, 1396 |
| Sau3AI | GATC | 6 cut(s) | 361, 382, 1044, 1170, 1228, 1432 |
| Sau96I | GGNCC | 4 cut(s) | 20, 36, 487, 915 |
| ScaI | AGTACT | 1 cut(s) | 1085 |
| SchI | GAGTC | 4 cut(s) | 230, 395, 878, 1229 |
| ScrFI | CCNGG | 3 cut(s) | 96, 118, 213 |
| SduI | GDGCHC | 4 cut(s) | 90, 569, 1349, 1442 |
| SfaNI | GCATC | 5 cut(s) | 406, 805, 895, 913, 935 |
| SfcI | CTRYAG | 1 cut(s) | 1303 |
| Sfr274I | CTCGAG | 3 cut(s) | 31, 218, 886 |
| SinI | GGWCC | 1 cut(s) | 915 |
| SlaI | CTCGAG | 3 cut(s) | 31, 218, 886 |
| SmlI | CTYRAG | 3 cut(s) | 31, 218, 886 |
| SmoI | CTYRAG | 3 cut(s) | 31, 218, 886 |
| SpeI | ACTAGT | 1 cut(s) | 1442 |
| Sse9I | AATT | 3 cut(s) | 448, 713, 1371 |
| SsiI | CCGC | 5 cut(s) | 164, 168, 627, 1260, 1398 |
| SspI | AATATT | 2 cut(s) | 370, 434 |
| SspMI | CTAG | 5 cut(s) | 141, 494, 1392, 1413, 1443 |
| SstI | GAGCTC | 1 cut(s) | 90 |
| StyD4I | CCNGG | 3 cut(s) | 94, 116, 211 |
| TaaI | ACNGT | 5 cut(s) | 82, 587, 701, 778, 1239 |
| TaiI | ACGT | 1 cut(s) | 594 |
| TaqI | TCGA | 5 cut(s) | 32, 219, 887, 1234, 1339 |
| TasI | AATT | 3 cut(s) | 448, 713, 1371 |
| TatI | WGTACW | 1 cut(s) | 1083 |
| TauI | GCSGC | 1 cut(s) | 629 |
| TfiI | GAWTC | 8 cut(s) | 26, 292, 471, 721, 767, 784, 867, 1013 |
| Tru1I | TTAA | 5 cut(s) | 480, 900, 1065, 1109, 1197 |
| Tru9I | TTAA | 5 cut(s) | 480, 900, 1065, 1109, 1197 |
| TscAI | CASTG | 3 cut(s) | 181, 187, 831 |
| TseFI | GTSAC | 1 cut(s) | 587 |
| TseI | GCWGC | 5 cut(s) | 170, 284, 515, 629, 1395 |
| Tsp45I | GTSAC | 1 cut(s) | 587 |
| TspDTI | ATGAA | 5 cut(s) | 294, 372, 444, 735, 797 |
| TspGWI | ACGGA | 4 cut(s) | 483, 514, 707, 1037 |
| TspRI | CASTG | 3 cut(s) | 181, 187, 831 |
| VpaK11BI | GGWCC | 1 cut(s) | 915 |
| XapI | RAATTY | 1 cut(s) | 713 |
| XhoI | CTCGAG | 3 cut(s) | 31, 218, 886 |
| XmiI | GTMKAC | 1 cut(s) | 985 |
| XspI | CTAG | 5 cut(s) | 141, 494, 1392, 1413, 1443 |
| ZrmI | AGTACT | 1 cut(s) | 1085 |
| Zsp2I | ATGCAT | 1 cut(s) | 928 |