HPC2 and ubinuclein domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G77310 AT1G77310 |
| fragaria_vesca | FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 |
| malus_domestica | MD08G1159200.v1.1 |
| prunus_persica | Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 |
| pyrus_communis | pycom348g00040 |
| rosa_chinensis | RchiOBHm_Chr6g0293421 RchiOBHm_Chr6g0296701 |
| rosa_laevigata | RLG00000011667 RLG00000011669 |
| rosa_multiflora | Rmu_sc0001741.1_g000003 Rmu_sc0001741.1_g000007 |
| rosa_roxburghii | Rroxscaffold_7G00171250 |
| rosa_rugosa | Rorug06G0264500 Rorug06G0264600 Rorug06G0264700 |
| rosa_samantha | Rh6AG376100 Rh6BG384400 Rh6CG362400 Rh6CG389500 Rh6CG389700 Rh6DG376900 |
| rosa_wichuraiana | Rw6G032880 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 887, 1204 |
| Acc36I | ACCTGC | 4 cut(s) | 505, 887, 1204, 1655 |
| AccB1I | GGYRCC | 2 cut(s) | 1489, 1831 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1988 |
| AccI | GTMKAC | 3 cut(s) | 161, 749, 2225 |
| AccII | CGCG | 1 cut(s) | 950 |
| AciI | CCGC | 7 cut(s) | 18, 21, 189, 821, 1202, 1943, 1969 |
| AclWI | GGATC | 5 cut(s) | 767, 780, 897, 910, 1745 |
| AcoI | YGGCCR | 3 cut(s) | 1709, 1786, 2135 |
| AcsI | RAATTY | 4 cut(s) | 701, 1038, 1551, 1586 |
| AcuI | CTGAAG | 2 cut(s) | 711, 2045 |
| AfaI | GTAC | 5 cut(s) | 231, 495, 675, 1070, 1954 |
| AfeI | AGCGCT | 1 cut(s) | 286 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1977 |
| AjnI | CCWGG | 2 cut(s) | 116, 553 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1811, 1843 |
| Alw21I | GWGCWC | 1 cut(s) | 90 |
| Alw26I | GTCTC | 5 cut(s) | 95, 118, 219, 967, 1841 |
| AlwI | GGATC | 5 cut(s) | 767, 780, 897, 910, 1745 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1964 |
| Ama87I | CYCGRG | 2 cut(s) | 95, 209 |
| Aor51HI | AGCGCT | 1 cut(s) | 286 |
| AoxI | GGCC | 5 cut(s) | 155, 1190, 1709, 1786, 2135 |
| ApeKI | GCWGC | 9 cut(s) | 266, 500, 806, 809, 1199, 1601, 1958, 1961, 2192 |
| ApoI | RAATTY | 4 cut(s) | 701, 1038, 1551, 1586 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2207, 2239 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1005 |
| AspLEI | GCGC | 4 cut(s) | 271, 287, 952, 1297 |
| AspS9I | GGNCC | 5 cut(s) | 155, 551, 871, 1667, 1991 |
| AsuC2I | CCSGG | 2 cut(s) | 96, 97 |
| AsuHPI | GGTGA | 5 cut(s) | 74, 191, 569, 838, 2078 |
| AsuNHI | GCTAGC | 2 cut(s) | 1301, 1696 |
| AvaI | CYCGRG | 2 cut(s) | 95, 209 |
| AvaII | GGWCC | 4 cut(s) | 551, 871, 1667, 1991 |
| BaeGI | GKGCMC | 1 cut(s) | 1104 |
| BalI | TGGCCA | 1 cut(s) | 1711 |
| BamHI | GGATCC | 2 cut(s) | 772, 902 |
| BanI | GGYRCC | 2 cut(s) | 1489, 1831 |
| BanII | GRGCYC | 1 cut(s) | 90 |
| BbsI | GAAGAC | 2 cut(s) | 390, 854 |
| Bbv12I | GWGCWC | 1 cut(s) | 90 |
| BbvCI | CCTCAGC | 1 cut(s) | 613 |
| BbvI | GCAGC | 9 cut(s) | 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179 |
| BccI | CCATC | 8 cut(s) | 446, 905, 985, 991, 1168, 1501, 1640, 2063 |
| BceAI | ACGGC | 2 cut(s) | 142, 1801 |
| BciT130I | CCWGG | 2 cut(s) | 118, 555 |
| BciVI | GTATCC | 1 cut(s) | 2141 |
| BcnI | CCSGG | 2 cut(s) | 96, 97 |
| BcoDI | GTCTC | 5 cut(s) | 95, 118, 219, 967, 1841 |
| BfaI | CTAG | 9 cut(s) | 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253 |
| BfoI | RGCGCY | 1 cut(s) | 288 |
| BfuAI | ACCTGC | 4 cut(s) | 505, 887, 1204, 1655 |
| BfuI | GTATCC | 1 cut(s) | 2141 |
| BglII | AGATCT | 1 cut(s) | 343 |
| BlpI | GCTNAGC | 1 cut(s) | 1692 |
| Bme1390I | CCNGG | 4 cut(s) | 96, 97, 118, 555 |
| Bme18I | GGWCC | 4 cut(s) | 551, 871, 1667, 1991 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1977 |
| BmeT110I | CYCGRG | 2 cut(s) | 95, 209 |
| BmgT120I | GGNCC | 5 cut(s) | 155, 551, 871, 1667, 1991 |
| BmiI | GGNNCC | 9 cut(s) | 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993 |
| BmrFI | CCNGG | 4 cut(s) | 96, 97, 118, 555 |
| BmrI | ACTGGG | 1 cut(s) | 1971 |
| BmsI | GCATC | 7 cut(s) | 391, 793, 883, 1541, 1588, 1651, 2044 |
| BmtI | GCTAGC | 2 cut(s) | 1305, 1700 |
| BmuI | ACTGGG | 1 cut(s) | 1971 |
| BoxI | GACNNNNGTC | 1 cut(s) | 854 |
| BpiI | GAAGAC | 2 cut(s) | 390, 854 |
| BpmI | CTGGAG | 4 cut(s) | 1548, 1581, 1628, 2204 |
| Bpu10I | CCTNAGC | 2 cut(s) | 177, 613 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1692 |
| BpuMI | CCSGG | 2 cut(s) | 96, 97 |
| BsaBI | GATNNNNATC | 2 cut(s) | 342, 366 |
| BsaI | GGTCTC | 3 cut(s) | 95, 967, 1841 |
| BsaJI | CCNNGG | 6 cut(s) | 95, 96, 1306, 1351, 1506, 1732 |
| BsaWI | WCCGGW | 1 cut(s) | 226 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 237, 267 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161 |
| Bse118I | RCCGGY | 3 cut(s) | 59, 66, 1335 |
| Bse1I | ACTGG | 6 cut(s) | 165, 483, 712, 1611, 1977, 2221 |
| Bse3DI | GCAATG | 2 cut(s) | 991, 1511 |
| Bse8I | GATNNNNATC | 2 cut(s) | 342, 366 |
| BseBI | CCWGG | 2 cut(s) | 118, 555 |
| BseDI | CCNNGG | 6 cut(s) | 95, 96, 1306, 1351, 1506, 1732 |
| BseGI | GGATG | 5 cut(s) | 418, 734, 1603, 1660, 2125 |
| BseJI | GATNNNNATC | 2 cut(s) | 342, 366 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161 |
| BseMI | GCAATG | 2 cut(s) | 991, 1511 |
| BseMII | CTCAG | 6 cut(s) | 168, 396, 627, 786, 1384, 1683 |
| BseNI | ACTGG | 6 cut(s) | 165, 483, 712, 1611, 1977, 2221 |
| BseRI | GAGGAG | 3 cut(s) | 174, 1828, 1859 |
| BseSI | GKGCMC | 1 cut(s) | 1104 |
| BseX3I | CGGCCG | 2 cut(s) | 1786, 2135 |
| BseXI | GCAGC | 9 cut(s) | 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179 |
| BseYI | CCCAGC | 3 cut(s) | 202, 1878, 1994 |
| BsgI | GTGCAG | 2 cut(s) | 795, 1587 |
| Bsh1236I | CGCG | 1 cut(s) | 950 |
| Bsh1285I | CGRYCG | 2 cut(s) | 1789, 2138 |
| BshFI | GGCC | 5 cut(s) | 157, 1192, 1711, 1788, 2137 |
| BshNI | GGYRCC | 2 cut(s) | 1489, 1831 |
| BsiEI | CGRYCG | 2 cut(s) | 1789, 2138 |
| BsiHKAI | GWGCWC | 1 cut(s) | 90 |
| BsiHKCI | CYCGRG | 2 cut(s) | 95, 209 |
| BsiSI | CCGG | 7 cut(s) | 60, 67, 96, 227, 1336, 2134, 2138 |
| BslFI | GGGAC | 2 cut(s) | 1653, 1977 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161 |
| BsmAI | GTCTC | 5 cut(s) | 95, 118, 219, 967, 1841 |
| BsmFI | GGGAC | 2 cut(s) | 1653, 1977 |
| BsnI | GGCC | 5 cut(s) | 157, 1192, 1711, 1788, 2137 |
| Bso31I | GGTCTC | 3 cut(s) | 95, 967, 1841 |
| BsoBI | CYCGRG | 2 cut(s) | 95, 209 |
| Bsp1286I | GDGCHC | 2 cut(s) | 90, 1104 |
| Bsp143I | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1692 |
| Bsp19I | CCATGG | 2 cut(s) | 1306, 1732 |
| BspACI | CCGC | 7 cut(s) | 18, 21, 189, 821, 1202, 1943, 1969 |
| BspANI | GGCC | 5 cut(s) | 157, 1192, 1711, 1788, 2137 |
| BspCNI | CTCAG | 6 cut(s) | 169, 397, 626, 787, 1383, 1684 |
| BspFNI | CGCG | 1 cut(s) | 950 |
| BspHI | TCATGA | 1 cut(s) | 1398 |
| BspLI | GGNNCC | 9 cut(s) | 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993 |
| BspMI | ACCTGC | 4 cut(s) | 505, 887, 1204, 1655 |
| BspOI | GCTAGC | 2 cut(s) | 1305, 1700 |
| BspPI | GGATC | 5 cut(s) | 767, 780, 897, 910, 1745 |
| BspT107I | GGYRCC | 2 cut(s) | 1489, 1831 |
| BspTNI | GGTCTC | 3 cut(s) | 95, 967, 1841 |
| BsrDI | GCAATG | 2 cut(s) | 991, 1511 |
| BsrFI | RCCGGY | 3 cut(s) | 59, 66, 1335 |
| BsrI | ACTGG | 6 cut(s) | 165, 483, 712, 1611, 1977, 2221 |
| BssAI | RCCGGY | 3 cut(s) | 59, 66, 1335 |
| BssECI | CCNNGG | 6 cut(s) | 95, 96, 1306, 1351, 1506, 1732 |
| BssMI | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| BssT1I | CCWWGG | 4 cut(s) | 1306, 1351, 1506, 1732 |
| Bst2UI | CCWGG | 2 cut(s) | 118, 555 |
| Bst4CI | ACNGT | 7 cut(s) | 82, 240, 667, 673, 1006, 1852, 2230 |
| Bst6I | CTCTTC | 3 cut(s) | 3, 786, 2090 |
| BstC8I | GCNNGC | 5 cut(s) | 819, 1299, 1303, 1698, 2190 |
| BstDEI | CTNAG | 6 cut(s) | 177, 405, 613, 795, 1370, 1692 |
| BstDSI | CCRYGG | 2 cut(s) | 1306, 1732 |
| BstEII | GGTNACC | 1 cut(s) | 62 |
| BstF5I | GGATG | 5 cut(s) | 418, 734, 1603, 1660, 2125 |
| BstFNI | CGCG | 1 cut(s) | 950 |
| BstH2I | RGCGCY | 1 cut(s) | 288 |
| BstHHI | GCGC | 4 cut(s) | 271, 287, 952, 1297 |
| BstKTI | GATC | 6 cut(s) | 346, 370, 775, 905, 1740, 1801 |
| BstMAI | GTCTC | 5 cut(s) | 95, 118, 219, 967, 1841 |
| BstMBI | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| BstMCI | CGRYCG | 2 cut(s) | 1789, 2138 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 203, 818, 1274, 1283, 1292, 1697 |
| BstNI | CCWGG | 2 cut(s) | 118, 555 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 854 |
| BstPI | GGTNACC | 1 cut(s) | 62 |
| BstSCI | CCNGG | 4 cut(s) | 94, 95, 116, 553 |
| BstSLI | GKGCMC | 1 cut(s) | 1104 |
| BstUI | CGCG | 1 cut(s) | 950 |
| BstV1I | GCAGC | 9 cut(s) | 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179 |
| BstV2I | GAAGAC | 2 cut(s) | 390, 854 |
| BstX2I | RGATCY | 3 cut(s) | 343, 772, 902 |
| BstYI | RGATCY | 3 cut(s) | 343, 772, 902 |
| BstZI | CGGCCG | 2 cut(s) | 1786, 2135 |
| BsuI | GTATCC | 1 cut(s) | 2141 |
| BsuRI | GGCC | 5 cut(s) | 157, 1192, 1711, 1788, 2137 |
| BtgI | CCRYGG | 2 cut(s) | 1306, 1732 |
| BtsCI | GGATG | 5 cut(s) | 418, 734, 1603, 1660, 2125 |
| BtsI | GCAGTG | 1 cut(s) | 812 |
| BtsIMutI | CAGTG | 6 cut(s) | 87, 669, 678, 812, 1056, 1604 |
| BveI | ACCTGC | 4 cut(s) | 505, 887, 1204, 1655 |
| Cac8I | GCNNGC | 5 cut(s) | 819, 1299, 1303, 1698, 2190 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1964 |
| CciI | TCATGA | 1 cut(s) | 1398 |
| CfoI | GCGC | 4 cut(s) | 271, 287, 952, 1297 |
| Cfr10I | RCCGGY | 3 cut(s) | 59, 66, 1335 |
| Cfr13I | GGNCC | 5 cut(s) | 155, 551, 871, 1667, 1991 |
| Cfr9I | CCCGGG | 1 cut(s) | 95 |
| CseI | GACGC | 1 cut(s) | 1223 |
| Csp6I | GTAC | 5 cut(s) | 230, 494, 674, 1069, 1953 |
| CviAII | CATG | 9 cut(s) | 449, 575, 932, 1097, 1307, 1399, 1594, 1723, 1733 |
| CviQI | GTAC | 5 cut(s) | 230, 494, 674, 1069, 1953 |
| DdeI | CTNAG | 6 cut(s) | 177, 405, 613, 795, 1370, 1692 |
| DpnI | GATC | 6 cut(s) | 345, 369, 774, 904, 1739, 1800 |
| DpnII | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| DraI | TTTAAA | 1 cut(s) | 889 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1977 |
| EaeI | YGGCCR | 3 cut(s) | 1709, 1786, 2135 |
| EagI | CGGCCG | 2 cut(s) | 1786, 2135 |
| Eam1104I | CTCTTC | 3 cut(s) | 3, 786, 2090 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1977 |
| EarI | CTCTTC | 3 cut(s) | 3, 786, 2090 |
| Ecl136II | GAGCTC | 1 cut(s) | 88 |
| EclXI | CGGCCG | 2 cut(s) | 1786, 2135 |
| Eco130I | CCWWGG | 4 cut(s) | 1306, 1351, 1506, 1732 |
| Eco24I | GRGCYC | 1 cut(s) | 90 |
| Eco31I | GGTCTC | 3 cut(s) | 95, 967, 1841 |
| Eco47I | GGWCC | 4 cut(s) | 551, 871, 1667, 1991 |
| Eco47III | AGCGCT | 1 cut(s) | 286 |
| Eco52I | CGGCCG | 2 cut(s) | 1786, 2135 |
| Eco53kI | GAGCTC | 1 cut(s) | 88 |
| Eco57I | CTGAAG | 2 cut(s) | 711, 2045 |
| Eco88I | CYCGRG | 2 cut(s) | 95, 209 |
| Eco91I | GGTNACC | 1 cut(s) | 62 |
| EcoICRI | GAGCTC | 1 cut(s) | 88 |
| EcoO109I | RGGNCCY | 3 cut(s) | 551, 871, 1667 |
| EcoO65I | GGTNACC | 1 cut(s) | 62 |
| EcoRII | CCWGG | 2 cut(s) | 116, 553 |
| EcoT14I | CCWWGG | 4 cut(s) | 1306, 1351, 1506, 1732 |
| EcoT38I | GRGCYC | 1 cut(s) | 90 |
| ErhI | CCWWGG | 4 cut(s) | 1306, 1351, 1506, 1732 |
| FaeI | CATG | 9 cut(s) | 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1373, 1405 |
| FaqI | GGGAC | 2 cut(s) | 1653, 1977 |
| FatI | CATG | 9 cut(s) | 448, 574, 931, 1096, 1306, 1398, 1593, 1722, 1732 |
| FauI | CCCGC | 1 cut(s) | 196 |
| FblI | GTMKAC | 3 cut(s) | 161, 749, 2225 |
| FokI | GGATG | 5 cut(s) | 425, 721, 1610, 1667, 2132 |
| FriOI | GRGCYC | 1 cut(s) | 90 |
| FspBI | CTAG | 9 cut(s) | 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253 |
| GlaI | GCGC | 4 cut(s) | 270, 286, 951, 1296 |
| GsaI | CCCAGC | 3 cut(s) | 206, 1882, 1998 |
| GsuI | CTGGAG | 4 cut(s) | 1548, 1581, 1628, 2204 |
| HaeII | RGCGCY | 1 cut(s) | 288 |
| HaeIII | GGCC | 5 cut(s) | 157, 1192, 1711, 1788, 2137 |
| HapII | CCGG | 7 cut(s) | 60, 67, 96, 227, 1336, 2134, 2138 |
| HgaI | GACGC | 1 cut(s) | 1223 |
| HhaI | GCGC | 4 cut(s) | 271, 287, 952, 1297 |
| Hin1II | CATG | 9 cut(s) | 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736 |
| Hin6I | GCGC | 4 cut(s) | 269, 285, 950, 1295 |
| HinP1I | GCGC | 4 cut(s) | 269, 285, 950, 1295 |
| HincII | GTYRAC | 3 cut(s) | 430, 466, 2226 |
| HindII | GTYRAC | 3 cut(s) | 430, 466, 2226 |
| HinfI | GANTC | 8 cut(s) | 26, 212, 386, 456, 755, 855, 1184, 1502 |
| HpaI | GTTAAC | 1 cut(s) | 466 |
| HpaII | CCGG | 7 cut(s) | 60, 67, 96, 227, 1336, 2134, 2138 |
| HphI | GGTGA | 5 cut(s) | 74, 191, 569, 838, 2078 |
| Hpy166II | GTNNAC | 7 cut(s) | 78, 162, 430, 466, 728, 750, 2226 |
| Hpy8I | GTNNAC | 7 cut(s) | 78, 162, 430, 466, 728, 750, 2226 |
| Hpy99I | CGWCG | 1 cut(s) | 34 |
| HpyAV | CCTTC | 9 cut(s) | 7, 786, 823, 1101, 1387, 2020, 2083, 2160, 2243 |
| HpyCH4III | ACNGT | 7 cut(s) | 82, 240, 667, 673, 1006, 1852, 2230 |
| HpyCH4IV | ACGT | 1 cut(s) | 1744 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 203, 818, 1274, 1283, 1292, 1697 |
| HpyF3I | CTNAG | 6 cut(s) | 177, 405, 613, 795, 1370, 1692 |
| HpySE526I | ACGT | 1 cut(s) | 1744 |
| Hsp92II | CATG | 9 cut(s) | 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736 |
| HspAI | GCGC | 4 cut(s) | 269, 285, 950, 1295 |
| KspAI | GTTAAC | 1 cut(s) | 466 |
| Kzo9I | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| Lsp1109I | GCAGC | 9 cut(s) | 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179 |
| LweI | GCATC | 7 cut(s) | 391, 793, 883, 1541, 1588, 1651, 2044 |
| MaeI | CTAG | 9 cut(s) | 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253 |
| MaeII | ACGT | 1 cut(s) | 1744 |
| MaeIII | GTNAC | 6 cut(s) | 62, 667, 878, 1326, 1355, 1622 |
| MalI | GATC | 6 cut(s) | 345, 369, 774, 904, 1739, 1800 |
| MboI | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| MfeI | CAATTG | 1 cut(s) | 1872 |
| MflI | RGATCY | 3 cut(s) | 343, 772, 902 |
| MhlI | GDGCHC | 2 cut(s) | 90, 1104 |
| MlsI | TGGCCA | 1 cut(s) | 1711 |
| MluNI | TGGCCA | 1 cut(s) | 1711 |
| MlyI | GAGTC | 4 cut(s) | 221, 380, 864, 1511 |
| MmeI | TCCRAC | 4 cut(s) | 115, 390, 1103, 2097 |
| Mox20I | TGGCCA | 1 cut(s) | 1711 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1005 |
| MscI | TGGCCA | 1 cut(s) | 1711 |
| MseI | TTAA | 9 cut(s) | 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1472 |
| Msp20I | TGGCCA | 1 cut(s) | 1711 |
| MspA1I | CMGCKG | 1 cut(s) | 1964 |
| MspI | CCGG | 7 cut(s) | 60, 67, 96, 227, 1336, 2134, 2138 |
| MspR9I | CCNGG | 4 cut(s) | 96, 97, 118, 555 |
| MunI | CAATTG | 1 cut(s) | 1872 |
| MvaI | CCWGG | 2 cut(s) | 118, 555 |
| MvnI | CGCG | 1 cut(s) | 950 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 203, 818, 1274, 1283, 1292, 1697 |
| NciI | CCSGG | 2 cut(s) | 96, 97 |
| NcoI | CCATGG | 2 cut(s) | 1306, 1732 |
| NdeII | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| NheI | GCTAGC | 2 cut(s) | 1301, 1696 |
| NlaIII | CATG | 9 cut(s) | 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736 |
| NlaIV | GGNNCC | 9 cut(s) | 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993 |
| NmuCI | GTSAC | 4 cut(s) | 62, 667, 1355, 1622 |
| PaeR7I | CTCGAG | 1 cut(s) | 209 |
| PagI | TCATGA | 1 cut(s) | 1398 |
| PaqCI | CACCTGC | 2 cut(s) | 887, 1204 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 38, 1777 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1005 |
| PfeI | GAWTC | 4 cut(s) | 26, 456, 755, 1184 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1988 |
| PfoI | TCCNGGA | 1 cut(s) | 116 |
| PleI | GAGTC | 4 cut(s) | 220, 380, 863, 1510 |
| PpsI | GAGTC | 4 cut(s) | 220, 380, 863, 1510 |
| PpuMI | RGGWCCY | 3 cut(s) | 551, 871, 1667 |
| PshAI | GACNNNNGTC | 1 cut(s) | 854 |
| Psp124BI | GAGCTC | 1 cut(s) | 90 |
| Psp5II | RGGWCCY | 3 cut(s) | 551, 871, 1667 |
| Psp6I | CCWGG | 2 cut(s) | 116, 553 |
| PspEI | GGTNACC | 1 cut(s) | 62 |
| PspFI | CCCAGC | 3 cut(s) | 202, 1878, 1994 |
| PspGI | CCWGG | 2 cut(s) | 116, 553 |
| PspN4I | GGNNCC | 9 cut(s) | 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993 |
| PspPI | GGNCC | 5 cut(s) | 155, 551, 871, 1667, 1991 |
| PspPPI | RGGWCCY | 3 cut(s) | 551, 871, 1667 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1964 |
| PsuI | RGATCY | 3 cut(s) | 343, 772, 902 |
| PvuII | CAGCTG | 1 cut(s) | 1964 |
| RsaI | GTAC | 5 cut(s) | 231, 495, 675, 1070, 1954 |
| RsaNI | GTAC | 5 cut(s) | 230, 494, 674, 1069, 1953 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1472 |
| SacI | GAGCTC | 1 cut(s) | 90 |
| SalI | GTCGAC | 1 cut(s) | 2224 |
| SaqAI | TTAA | 9 cut(s) | 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183 |
| Sau3AI | GATC | 6 cut(s) | 343, 367, 772, 902, 1737, 1798 |
| Sau96I | GGNCC | 5 cut(s) | 155, 551, 871, 1667, 1991 |
| SchI | GAGTC | 4 cut(s) | 221, 380, 864, 1511 |
| ScrFI | CCNGG | 4 cut(s) | 96, 97, 118, 555 |
| SduI | GDGCHC | 2 cut(s) | 90, 1104 |
| SfaNI | GCATC | 7 cut(s) | 391, 793, 883, 1541, 1588, 1651, 2044 |
| Sfr274I | CTCGAG | 1 cut(s) | 209 |
| SinI | GGWCC | 4 cut(s) | 551, 871, 1667, 1991 |
| SlaI | CTCGAG | 1 cut(s) | 209 |
| SmaI | CCCGGG | 1 cut(s) | 97 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1472 |
| SmlI | CTYRAG | 1 cut(s) | 209 |
| SmoI | CTYRAG | 1 cut(s) | 209 |
| SsiI | CCGC | 7 cut(s) | 18, 21, 189, 821, 1202, 1943, 1969 |
| SspMI | CTAG | 9 cut(s) | 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253 |
| SstI | GAGCTC | 1 cut(s) | 90 |
| StyD4I | CCNGG | 4 cut(s) | 94, 95, 116, 553 |
| StyI | CCWWGG | 4 cut(s) | 1306, 1351, 1506, 1732 |
| TaaI | ACNGT | 7 cut(s) | 82, 240, 667, 673, 1006, 1852, 2230 |
| TaiI | ACGT | 1 cut(s) | 1747 |
| TaqI | TCGA | 7 cut(s) | 32, 210, 629, 1009, 1855, 2001, 2225 |
| TaqII | GACCGA | 1 cut(s) | 1746 |
| TauI | GCSGC | 2 cut(s) | 21, 24 |
| TfiI | GAWTC | 4 cut(s) | 26, 456, 755, 1184 |
| Tru1I | TTAA | 9 cut(s) | 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183 |
| Tru9I | TTAA | 9 cut(s) | 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183 |
| TscAI | CASTG | 6 cut(s) | 87, 676, 685, 819, 1063, 1611 |
| TseFI | GTSAC | 4 cut(s) | 62, 667, 1355, 1622 |
| TseI | GCWGC | 9 cut(s) | 266, 500, 806, 809, 1199, 1601, 1958, 1961, 2192 |
| Tsp45I | GTSAC | 4 cut(s) | 62, 667, 1355, 1622 |
| TspDTI | ATGAA | 9 cut(s) | 264, 276, 354, 723, 906, 1358, 1671, 1711, 2136 |
| TspGWI | ACGGA | 3 cut(s) | 1077, 1175, 1786 |
| TspMI | CCCGGG | 1 cut(s) | 95 |
| TspRI | CASTG | 6 cut(s) | 87, 676, 685, 819, 1063, 1611 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1988 |
| VpaK11BI | GGWCC | 4 cut(s) | 551, 871, 1667, 1991 |
| XapI | RAATTY | 4 cut(s) | 701, 1038, 1551, 1586 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 766 |
| XhoI | CTCGAG | 1 cut(s) | 209 |
| XmaI | CCCGGG | 1 cut(s) | 95 |
| XmiI | GTMKAC | 3 cut(s) | 161, 749, 2225 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1005 |
| XspI | CTAG | 9 cut(s) | 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253 |