Prupe.1G489600_v2.0.a1

HPC2 and ubinuclein domain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
40756752 .. 40764726
7975 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G489600.3

Sequence Viewer

Length: 2259 bp
ATGGAGGAAGAGAAGGGCGGCGGCGAATCGTCGAGGGCTTCGTCCAAGTTTGTGAAAGCCGGTGACCGGCAAATGTTCACAGTGGAGCTCCGACCCGGGGAGACCACCATAGTCTCCTGGAAGAAGCTCCTGAAAGATACGAACAAGGTCAATGGGCCGTCTACCAGTTCTGCTCCTGAGCCTCCTCCCGCCAACGCTCACCCAGCTCTCGAGTCTCGTATAGCTCCGGTACAACAACTGTCAGGAGATGAAGTGAAAGATGAAGCTGCGCCACATCGTTTTAGCGCTGTAATTGAGAAGATTGAACGCCTCTATATGGGTAAAGATAGTAGTGATGATGAAGATCTAAATGATATTCCTGATGACGATCAGTATGATACAGAAGACTCTTTTATTGATGATGCTGAGTTGGATGAGTATTTTGAAGTTGACAATTCAGCAATAAAACATGATGGATTCTTTGTTAACAGGGGGAAACTGGAACGCATTAGCGTACCTGCTGCATTACCTAACCAACAACCAAAGAAAAGGCGAAGAAAAGAGGTAAAGGGTCCTGGTGAAAATGATGATAGTCATGTGCCAAATAAACACGCAAAAGTTGGTAAGACAGCCTCAGCAAAGATTACATCGACACTTGTGAAGAACTCATCTGCTCCCATTCAAACCGTCACTGTACCCACTGAACACTCTGAAGATGTGAAATTTCAGAACCAGTTGAATGTTTGTGGACTTTCATCCACAAAGAAGTCTACTGATTCCAAAACAATTCTGGATCCTTCTCTTCTGAAAGTTTCTGAGGGAGATGCTGCTGCACTGCAAGCGGAGGTGAAGGATATGGATAAGCAGAAGACAGGAGTCCTGCTGTCAAAGGACCCAAGTAACAGATTTAAAGATGCAGGTGGATCCTCTGATGGTTCATATCAGAAATACCATGAGAAAAGTGCTTACGCGCAAACCAAACCCCAATCTGGGAGACCATCTAGCAATGCTGATGAGATGGAAACAGTTCGAGCCAGAGAGAAAAATGGGGTTTGTGAAATTCCAGACCTTAATCTCACTGACGGAAAGTACGCTGTTCCAACAACAAAACCTTCACATGGGCACAAAAGGGATAGTTCTAGTGTAAGGTCAAAAAGTTCAATGCTTGAAAAGGCTATTACGGATTTAGAGAAGATGGTTGCAGAATCTAGGCCACCTGCTGCGGATAATCAAGACGCAGATAATTTATCCCAAGCAATTAAAAGGAGATTGCCTAGAGAAATAAAGGCGAAACTTGCTAAAGTTGCTAGATTAGCGCAGGCTAGCCATGGGAAAATAACGAAAGAGTTACTCAACCGGCTTATGAATATCCTTGGTCACTTAATACAACTCAGAACATTAAAGAGAAACTTGAAGGTCATGATTAGTATGGGTCTTTCAGCAAAAAAGGAGAAAGATGACAGGTTTCAACAGATAAAGAGGGAAGTCATAGATATGATTAAGATAAAGGCACCATCTTTGGAGTCCAAGGCATTGCAACAACAATCTGGAGCATCAGATGATTTTCAAGAAATTTCCTCTGGAGCCAAAGAACTTTCTAAAAGAAAATTTAGCATGGATGCTGCACTGGAGGATAAGATTTGTGACCTCTATGACCTTTTTGTTGATGGGCTGGATGAAGATGCAGGTCCCCAAATAAGAAAGCTCTATGCTGAGCTAGCAGGATTGTGGCCAAATGGTTTCATGGACAACCATGGGATCAAACGTGCAATTTGTCGGTCAAAAGAAAGACGGAGGGAGCGATACGGCCGAAATAAAGATCAGGAGAAAATGAGGAGGAAAAAGATGTTGGCACCAAGAACAGAGGAGACCGTTCGAGTTGAGGCGAGTTCAATTGCCCAGCAACAATATATGCGAGAGAGATTGGCAACTGAACCTAGCAGTCATAGTCTGACAAACAAGGCGGTATCTGGTACAGCAGCAGCTGTGCGGACACCCAGTCCAATAAATGGTCCCAGCTTCGACAGGCTTAAACAAGAGAAACTGAAGGGAAGTTCAAGCAGTTCCCCAGACGATGCGAGGGTAGGTGATGGTGCATTGACAAAGAAGAAGGCGAAGAGGAAGCCAGAACAGGAGTTGGATGAAACTCGTATCCGGCCGGAGAAATTACCTTCCCAACAGGGGGAGGAAAGGCACAAGTCCTTAAAGCAGGCTGCTGGTCTGCCCCATAAATCAAACCTCCAGTCGACAGTCCTTCCAAGTGTGGAGCAGTCTAGCTGA

Protein Analysis

753

Amino Acids

83.28

Weight (kDa)

9.12

Isoelectric Point (pI)

53.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 887, 1204
Acc36I ACCTGC 4 cut(s) 505, 887, 1204, 1655
AccB1I GGYRCC 2 cut(s) 1489, 1831
AccB7I CCANNNNNTGG 1 cut(s) 1988
AccI GTMKAC 3 cut(s) 161, 749, 2225
AccII CGCG 1 cut(s) 950
AciI CCGC 7 cut(s) 18, 21, 189, 821, 1202, 1943, 1969
AclWI GGATC 5 cut(s) 767, 780, 897, 910, 1745
AcoI YGGCCR 3 cut(s) 1709, 1786, 2135
AcsI RAATTY 4 cut(s) 701, 1038, 1551, 1586
AcuI CTGAAG 2 cut(s) 711, 2045
AfaI GTAC 5 cut(s) 231, 495, 675, 1070, 1954
AfeI AGCGCT 1 cut(s) 286
AfiI CCNNNNNNNGG 9 cut(s) 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161
AhdI GACNNNNNGTC 1 cut(s) 1977
AjnI CCWGG 2 cut(s) 116, 553
AjuI GAANNNNNNNTTGG 2 cut(s) 1811, 1843
Alw21I GWGCWC 1 cut(s) 90
Alw26I GTCTC 5 cut(s) 95, 118, 219, 967, 1841
AlwI GGATC 5 cut(s) 767, 780, 897, 910, 1745
AlwNI CAGNNNCTG 1 cut(s) 1964
Ama87I CYCGRG 2 cut(s) 95, 209
Aor51HI AGCGCT 1 cut(s) 286
AoxI GGCC 5 cut(s) 155, 1190, 1709, 1786, 2135
ApeKI GCWGC 9 cut(s) 266, 500, 806, 809, 1199, 1601, 1958, 1961, 2192
ApoI RAATTY 4 cut(s) 701, 1038, 1551, 1586
ArsI GACNNNNNNTTYG 2 cut(s) 2207, 2239
Asp700I GAANNNNTTC 1 cut(s) 1005
AspLEI GCGC 4 cut(s) 271, 287, 952, 1297
AspS9I GGNCC 5 cut(s) 155, 551, 871, 1667, 1991
AsuC2I CCSGG 2 cut(s) 96, 97
AsuHPI GGTGA 5 cut(s) 74, 191, 569, 838, 2078
AsuNHI GCTAGC 2 cut(s) 1301, 1696
AvaI CYCGRG 2 cut(s) 95, 209
AvaII GGWCC 4 cut(s) 551, 871, 1667, 1991
BaeGI GKGCMC 1 cut(s) 1104
BalI TGGCCA 1 cut(s) 1711
BamHI GGATCC 2 cut(s) 772, 902
BanI GGYRCC 2 cut(s) 1489, 1831
BanII GRGCYC 1 cut(s) 90
BbsI GAAGAC 2 cut(s) 390, 854
Bbv12I GWGCWC 1 cut(s) 90
BbvCI CCTCAGC 1 cut(s) 613
BbvI GCAGC 9 cut(s) 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179
BccI CCATC 8 cut(s) 446, 905, 985, 991, 1168, 1501, 1640, 2063
BceAI ACGGC 2 cut(s) 142, 1801
BciT130I CCWGG 2 cut(s) 118, 555
BciVI GTATCC 1 cut(s) 2141
BcnI CCSGG 2 cut(s) 96, 97
BcoDI GTCTC 5 cut(s) 95, 118, 219, 967, 1841
BfaI CTAG 9 cut(s) 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253
BfoI RGCGCY 1 cut(s) 288
BfuAI ACCTGC 4 cut(s) 505, 887, 1204, 1655
BfuI GTATCC 1 cut(s) 2141
BglII AGATCT 1 cut(s) 343
BlpI GCTNAGC 1 cut(s) 1692
Bme1390I CCNGG 4 cut(s) 96, 97, 118, 555
Bme18I GGWCC 4 cut(s) 551, 871, 1667, 1991
BmeRI GACNNNNNGTC 1 cut(s) 1977
BmeT110I CYCGRG 2 cut(s) 95, 209
BmgT120I GGNCC 5 cut(s) 155, 551, 871, 1667, 1991
BmiI GGNNCC 9 cut(s) 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993
BmrFI CCNGG 4 cut(s) 96, 97, 118, 555
BmrI ACTGGG 1 cut(s) 1971
BmsI GCATC 7 cut(s) 391, 793, 883, 1541, 1588, 1651, 2044
BmtI GCTAGC 2 cut(s) 1305, 1700
BmuI ACTGGG 1 cut(s) 1971
BoxI GACNNNNGTC 1 cut(s) 854
BpiI GAAGAC 2 cut(s) 390, 854
BpmI CTGGAG 4 cut(s) 1548, 1581, 1628, 2204
Bpu10I CCTNAGC 2 cut(s) 177, 613
Bpu1102I GCTNAGC 1 cut(s) 1692
BpuMI CCSGG 2 cut(s) 96, 97
BsaBI GATNNNNATC 2 cut(s) 342, 366
BsaI GGTCTC 3 cut(s) 95, 967, 1841
BsaJI CCNNGG 6 cut(s) 95, 96, 1306, 1351, 1506, 1732
BsaWI WCCGGW 1 cut(s) 226
BsaXI ACNNNNNCTCC 2 cut(s) 237, 267
Bsc4I CCNNNNNNNGG 9 cut(s) 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161
Bse118I RCCGGY 3 cut(s) 59, 66, 1335
Bse1I ACTGG 6 cut(s) 165, 483, 712, 1611, 1977, 2221
Bse3DI GCAATG 2 cut(s) 991, 1511
Bse8I GATNNNNATC 2 cut(s) 342, 366
BseBI CCWGG 2 cut(s) 118, 555
BseDI CCNNGG 6 cut(s) 95, 96, 1306, 1351, 1506, 1732
BseGI GGATG 5 cut(s) 418, 734, 1603, 1660, 2125
BseJI GATNNNNATC 2 cut(s) 342, 366
BseLI CCNNNNNNNGG 9 cut(s) 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161
BseMI GCAATG 2 cut(s) 991, 1511
BseMII CTCAG 6 cut(s) 168, 396, 627, 786, 1384, 1683
BseNI ACTGG 6 cut(s) 165, 483, 712, 1611, 1977, 2221
BseRI GAGGAG 3 cut(s) 174, 1828, 1859
BseSI GKGCMC 1 cut(s) 1104
BseX3I CGGCCG 2 cut(s) 1786, 2135
BseXI GCAGC 9 cut(s) 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179
BseYI CCCAGC 3 cut(s) 202, 1878, 1994
BsgI GTGCAG 2 cut(s) 795, 1587
Bsh1236I CGCG 1 cut(s) 950
Bsh1285I CGRYCG 2 cut(s) 1789, 2138
BshFI GGCC 5 cut(s) 157, 1192, 1711, 1788, 2137
BshNI GGYRCC 2 cut(s) 1489, 1831
BsiEI CGRYCG 2 cut(s) 1789, 2138
BsiHKAI GWGCWC 1 cut(s) 90
BsiHKCI CYCGRG 2 cut(s) 95, 209
BsiSI CCGG 7 cut(s) 60, 67, 96, 227, 1336, 2134, 2138
BslFI GGGAC 2 cut(s) 1653, 1977
BslI CCNNNNNNNGG 9 cut(s) 66, 97, 316, 968, 969, 1097, 1988, 2160, 2161
BsmAI GTCTC 5 cut(s) 95, 118, 219, 967, 1841
BsmFI GGGAC 2 cut(s) 1653, 1977
BsnI GGCC 5 cut(s) 157, 1192, 1711, 1788, 2137
Bso31I GGTCTC 3 cut(s) 95, 967, 1841
BsoBI CYCGRG 2 cut(s) 95, 209
Bsp1286I GDGCHC 2 cut(s) 90, 1104
Bsp143I GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
Bsp1720I GCTNAGC 1 cut(s) 1692
Bsp19I CCATGG 2 cut(s) 1306, 1732
BspACI CCGC 7 cut(s) 18, 21, 189, 821, 1202, 1943, 1969
BspANI GGCC 5 cut(s) 157, 1192, 1711, 1788, 2137
BspCNI CTCAG 6 cut(s) 169, 397, 626, 787, 1383, 1684
BspFNI CGCG 1 cut(s) 950
BspHI TCATGA 1 cut(s) 1398
BspLI GGNNCC 9 cut(s) 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993
BspMI ACCTGC 4 cut(s) 505, 887, 1204, 1655
BspOI GCTAGC 2 cut(s) 1305, 1700
BspPI GGATC 5 cut(s) 767, 780, 897, 910, 1745
BspT107I GGYRCC 2 cut(s) 1489, 1831
BspTNI GGTCTC 3 cut(s) 95, 967, 1841
BsrDI GCAATG 2 cut(s) 991, 1511
BsrFI RCCGGY 3 cut(s) 59, 66, 1335
BsrI ACTGG 6 cut(s) 165, 483, 712, 1611, 1977, 2221
BssAI RCCGGY 3 cut(s) 59, 66, 1335
BssECI CCNNGG 6 cut(s) 95, 96, 1306, 1351, 1506, 1732
BssMI GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
BssT1I CCWWGG 4 cut(s) 1306, 1351, 1506, 1732
Bst2UI CCWGG 2 cut(s) 118, 555
Bst4CI ACNGT 7 cut(s) 82, 240, 667, 673, 1006, 1852, 2230
Bst6I CTCTTC 3 cut(s) 3, 786, 2090
BstC8I GCNNGC 5 cut(s) 819, 1299, 1303, 1698, 2190
BstDEI CTNAG 6 cut(s) 177, 405, 613, 795, 1370, 1692
BstDSI CCRYGG 2 cut(s) 1306, 1732
BstEII GGTNACC 1 cut(s) 62
BstF5I GGATG 5 cut(s) 418, 734, 1603, 1660, 2125
BstFNI CGCG 1 cut(s) 950
BstH2I RGCGCY 1 cut(s) 288
BstHHI GCGC 4 cut(s) 271, 287, 952, 1297
BstKTI GATC 6 cut(s) 346, 370, 775, 905, 1740, 1801
BstMAI GTCTC 5 cut(s) 95, 118, 219, 967, 1841
BstMBI GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
BstMCI CGRYCG 2 cut(s) 1789, 2138
BstMWI GCNNNNNNNGC 6 cut(s) 203, 818, 1274, 1283, 1292, 1697
BstNI CCWGG 2 cut(s) 118, 555
BstPAI GACNNNNGTC 1 cut(s) 854
BstPI GGTNACC 1 cut(s) 62
BstSCI CCNGG 4 cut(s) 94, 95, 116, 553
BstSLI GKGCMC 1 cut(s) 1104
BstUI CGCG 1 cut(s) 950
BstV1I GCAGC 9 cut(s) 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179
BstV2I GAAGAC 2 cut(s) 390, 854
BstX2I RGATCY 3 cut(s) 343, 772, 902
BstYI RGATCY 3 cut(s) 343, 772, 902
BstZI CGGCCG 2 cut(s) 1786, 2135
BsuI GTATCC 1 cut(s) 2141
BsuRI GGCC 5 cut(s) 157, 1192, 1711, 1788, 2137
BtgI CCRYGG 2 cut(s) 1306, 1732
BtsCI GGATG 5 cut(s) 418, 734, 1603, 1660, 2125
BtsI GCAGTG 1 cut(s) 812
BtsIMutI CAGTG 6 cut(s) 87, 669, 678, 812, 1056, 1604
BveI ACCTGC 4 cut(s) 505, 887, 1204, 1655
Cac8I GCNNGC 5 cut(s) 819, 1299, 1303, 1698, 2190
CaiI CAGNNNCTG 1 cut(s) 1964
CciI TCATGA 1 cut(s) 1398
CfoI GCGC 4 cut(s) 271, 287, 952, 1297
Cfr10I RCCGGY 3 cut(s) 59, 66, 1335
Cfr13I GGNCC 5 cut(s) 155, 551, 871, 1667, 1991
Cfr9I CCCGGG 1 cut(s) 95
CseI GACGC 1 cut(s) 1223
Csp6I GTAC 5 cut(s) 230, 494, 674, 1069, 1953
CviAII CATG 9 cut(s) 449, 575, 932, 1097, 1307, 1399, 1594, 1723, 1733
CviQI GTAC 5 cut(s) 230, 494, 674, 1069, 1953
DdeI CTNAG 6 cut(s) 177, 405, 613, 795, 1370, 1692
DpnI GATC 6 cut(s) 345, 369, 774, 904, 1739, 1800
DpnII GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
DraI TTTAAA 1 cut(s) 889
DriI GACNNNNNGTC 1 cut(s) 1977
EaeI YGGCCR 3 cut(s) 1709, 1786, 2135
EagI CGGCCG 2 cut(s) 1786, 2135
Eam1104I CTCTTC 3 cut(s) 3, 786, 2090
Eam1105I GACNNNNNGTC 1 cut(s) 1977
EarI CTCTTC 3 cut(s) 3, 786, 2090
Ecl136II GAGCTC 1 cut(s) 88
EclXI CGGCCG 2 cut(s) 1786, 2135
Eco130I CCWWGG 4 cut(s) 1306, 1351, 1506, 1732
Eco24I GRGCYC 1 cut(s) 90
Eco31I GGTCTC 3 cut(s) 95, 967, 1841
Eco47I GGWCC 4 cut(s) 551, 871, 1667, 1991
Eco47III AGCGCT 1 cut(s) 286
Eco52I CGGCCG 2 cut(s) 1786, 2135
Eco53kI GAGCTC 1 cut(s) 88
Eco57I CTGAAG 2 cut(s) 711, 2045
Eco88I CYCGRG 2 cut(s) 95, 209
Eco91I GGTNACC 1 cut(s) 62
EcoICRI GAGCTC 1 cut(s) 88
EcoO109I RGGNCCY 3 cut(s) 551, 871, 1667
EcoO65I GGTNACC 1 cut(s) 62
EcoRII CCWGG 2 cut(s) 116, 553
EcoT14I CCWWGG 4 cut(s) 1306, 1351, 1506, 1732
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 4 cut(s) 1306, 1351, 1506, 1732
FaeI CATG 9 cut(s) 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736
FalI AAGNNNNNCTT 2 cut(s) 1373, 1405
FaqI GGGAC 2 cut(s) 1653, 1977
FatI CATG 9 cut(s) 448, 574, 931, 1096, 1306, 1398, 1593, 1722, 1732
FauI CCCGC 1 cut(s) 196
FblI GTMKAC 3 cut(s) 161, 749, 2225
FokI GGATG 5 cut(s) 425, 721, 1610, 1667, 2132
FriOI GRGCYC 1 cut(s) 90
FspBI CTAG 9 cut(s) 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253
GlaI GCGC 4 cut(s) 270, 286, 951, 1296
GsaI CCCAGC 3 cut(s) 206, 1882, 1998
GsuI CTGGAG 4 cut(s) 1548, 1581, 1628, 2204
HaeII RGCGCY 1 cut(s) 288
HaeIII GGCC 5 cut(s) 157, 1192, 1711, 1788, 2137
HapII CCGG 7 cut(s) 60, 67, 96, 227, 1336, 2134, 2138
HgaI GACGC 1 cut(s) 1223
HhaI GCGC 4 cut(s) 271, 287, 952, 1297
Hin1II CATG 9 cut(s) 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736
Hin6I GCGC 4 cut(s) 269, 285, 950, 1295
HinP1I GCGC 4 cut(s) 269, 285, 950, 1295
HincII GTYRAC 3 cut(s) 430, 466, 2226
HindII GTYRAC 3 cut(s) 430, 466, 2226
HinfI GANTC 8 cut(s) 26, 212, 386, 456, 755, 855, 1184, 1502
HpaI GTTAAC 1 cut(s) 466
HpaII CCGG 7 cut(s) 60, 67, 96, 227, 1336, 2134, 2138
HphI GGTGA 5 cut(s) 74, 191, 569, 838, 2078
Hpy166II GTNNAC 7 cut(s) 78, 162, 430, 466, 728, 750, 2226
Hpy8I GTNNAC 7 cut(s) 78, 162, 430, 466, 728, 750, 2226
Hpy99I CGWCG 1 cut(s) 34
HpyAV CCTTC 9 cut(s) 7, 786, 823, 1101, 1387, 2020, 2083, 2160, 2243
HpyCH4III ACNGT 7 cut(s) 82, 240, 667, 673, 1006, 1852, 2230
HpyCH4IV ACGT 1 cut(s) 1744
HpyF10VI GCNNNNNNNGC 6 cut(s) 203, 818, 1274, 1283, 1292, 1697
HpyF3I CTNAG 6 cut(s) 177, 405, 613, 795, 1370, 1692
HpySE526I ACGT 1 cut(s) 1744
Hsp92II CATG 9 cut(s) 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736
HspAI GCGC 4 cut(s) 269, 285, 950, 1295
KspAI GTTAAC 1 cut(s) 466
Kzo9I GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
Lsp1109I GCAGC 9 cut(s) 253, 487, 793, 796, 1186, 1588, 1970, 1973, 2179
LweI GCATC 7 cut(s) 391, 793, 883, 1541, 1588, 1651, 2044
MaeI CTAG 9 cut(s) 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253
MaeII ACGT 1 cut(s) 1744
MaeIII GTNAC 6 cut(s) 62, 667, 878, 1326, 1355, 1622
MalI GATC 6 cut(s) 345, 369, 774, 904, 1739, 1800
MboI GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
MfeI CAATTG 1 cut(s) 1872
MflI RGATCY 3 cut(s) 343, 772, 902
MhlI GDGCHC 2 cut(s) 90, 1104
MlsI TGGCCA 1 cut(s) 1711
MluNI TGGCCA 1 cut(s) 1711
MlyI GAGTC 4 cut(s) 221, 380, 864, 1511
MmeI TCCRAC 4 cut(s) 115, 390, 1103, 2097
Mox20I TGGCCA 1 cut(s) 1711
MroXI GAANNNNTTC 1 cut(s) 1005
MscI TGGCCA 1 cut(s) 1711
MseI TTAA 9 cut(s) 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183
MslI CAYNNNNRTG 1 cut(s) 1472
Msp20I TGGCCA 1 cut(s) 1711
MspA1I CMGCKG 1 cut(s) 1964
MspI CCGG 7 cut(s) 60, 67, 96, 227, 1336, 2134, 2138
MspR9I CCNGG 4 cut(s) 96, 97, 118, 555
MunI CAATTG 1 cut(s) 1872
MvaI CCWGG 2 cut(s) 118, 555
MvnI CGCG 1 cut(s) 950
MwoI GCNNNNNNNGC 6 cut(s) 203, 818, 1274, 1283, 1292, 1697
NciI CCSGG 2 cut(s) 96, 97
NcoI CCATGG 2 cut(s) 1306, 1732
NdeII GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
NheI GCTAGC 2 cut(s) 1301, 1696
NlaIII CATG 9 cut(s) 452, 578, 935, 1100, 1310, 1402, 1597, 1726, 1736
NlaIV GGNNCC 9 cut(s) 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993
NmuCI GTSAC 4 cut(s) 62, 667, 1355, 1622
PaeR7I CTCGAG 1 cut(s) 209
PagI TCATGA 1 cut(s) 1398
PaqCI CACCTGC 2 cut(s) 887, 1204
PcsI WCGNNNNNNNCGW 2 cut(s) 38, 1777
PdmI GAANNNNTTC 1 cut(s) 1005
PfeI GAWTC 4 cut(s) 26, 456, 755, 1184
PflMI CCANNNNNTGG 1 cut(s) 1988
PfoI TCCNGGA 1 cut(s) 116
PleI GAGTC 4 cut(s) 220, 380, 863, 1510
PpsI GAGTC 4 cut(s) 220, 380, 863, 1510
PpuMI RGGWCCY 3 cut(s) 551, 871, 1667
PshAI GACNNNNGTC 1 cut(s) 854
Psp124BI GAGCTC 1 cut(s) 90
Psp5II RGGWCCY 3 cut(s) 551, 871, 1667
Psp6I CCWGG 2 cut(s) 116, 553
PspEI GGTNACC 1 cut(s) 62
PspFI CCCAGC 3 cut(s) 202, 1878, 1994
PspGI CCWGG 2 cut(s) 116, 553
PspN4I GGNNCC 9 cut(s) 552, 774, 873, 904, 1491, 1564, 1669, 1833, 1993
PspPI GGNCC 5 cut(s) 155, 551, 871, 1667, 1991
PspPPI RGGWCCY 3 cut(s) 551, 871, 1667
PstNI CAGNNNCTG 1 cut(s) 1964
PsuI RGATCY 3 cut(s) 343, 772, 902
PvuII CAGCTG 1 cut(s) 1964
RsaI GTAC 5 cut(s) 231, 495, 675, 1070, 1954
RsaNI GTAC 5 cut(s) 230, 494, 674, 1069, 1953
RseI CAYNNNNRTG 1 cut(s) 1472
SacI GAGCTC 1 cut(s) 90
SalI GTCGAC 1 cut(s) 2224
SaqAI TTAA 9 cut(s) 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183
Sau3AI GATC 6 cut(s) 343, 367, 772, 902, 1737, 1798
Sau96I GGNCC 5 cut(s) 155, 551, 871, 1667, 1991
SchI GAGTC 4 cut(s) 221, 380, 864, 1511
ScrFI CCNGG 4 cut(s) 96, 97, 118, 555
SduI GDGCHC 2 cut(s) 90, 1104
SfaNI GCATC 7 cut(s) 391, 793, 883, 1541, 1588, 1651, 2044
Sfr274I CTCGAG 1 cut(s) 209
SinI GGWCC 4 cut(s) 551, 871, 1667, 1991
SlaI CTCGAG 1 cut(s) 209
SmaI CCCGGG 1 cut(s) 97
SmiMI CAYNNNNRTG 1 cut(s) 1472
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
SsiI CCGC 7 cut(s) 18, 21, 189, 821, 1202, 1943, 1969
SspMI CTAG 9 cut(s) 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253
SstI GAGCTC 1 cut(s) 90
StyD4I CCNGG 4 cut(s) 94, 95, 116, 553
StyI CCWWGG 4 cut(s) 1306, 1351, 1506, 1732
TaaI ACNGT 7 cut(s) 82, 240, 667, 673, 1006, 1852, 2230
TaiI ACGT 1 cut(s) 1747
TaqI TCGA 7 cut(s) 32, 210, 629, 1009, 1855, 2001, 2225
TaqII GACCGA 1 cut(s) 1746
TauI GCSGC 2 cut(s) 21, 24
TfiI GAWTC 4 cut(s) 26, 456, 755, 1184
Tru1I TTAA 9 cut(s) 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183
Tru9I TTAA 9 cut(s) 465, 888, 1050, 1239, 1361, 1379, 1479, 2010, 2183
TscAI CASTG 6 cut(s) 87, 676, 685, 819, 1063, 1611
TseFI GTSAC 4 cut(s) 62, 667, 1355, 1622
TseI GCWGC 9 cut(s) 266, 500, 806, 809, 1199, 1601, 1958, 1961, 2192
Tsp45I GTSAC 4 cut(s) 62, 667, 1355, 1622
TspDTI ATGAA 9 cut(s) 264, 276, 354, 723, 906, 1358, 1671, 1711, 2136
TspGWI ACGGA 3 cut(s) 1077, 1175, 1786
TspMI CCCGGG 1 cut(s) 95
TspRI CASTG 6 cut(s) 87, 676, 685, 819, 1063, 1611
Van91I CCANNNNNTGG 1 cut(s) 1988
VpaK11BI GGWCC 4 cut(s) 551, 871, 1667, 1991
XapI RAATTY 4 cut(s) 701, 1038, 1551, 1586
XcmI CCANNNNNNNNNTGG 1 cut(s) 766
XhoI CTCGAG 1 cut(s) 209
XmaI CCCGGG 1 cut(s) 95
XmiI GTMKAC 3 cut(s) 161, 749, 2225
XmnI GAANNNNTTC 1 cut(s) 1005
XspI CTAG 9 cut(s) 981, 1119, 1188, 1254, 1287, 1302, 1697, 1917, 2253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.