Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0003763

Physical Location & Seq

Genomic Coordinates Reverse (-)

57128887 .. 57134999

Gene Structure 6113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG376900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2265 bp

ATGGACGACCAGAAGGCCGGCCCCGAATCCTCGAGGGCCTCCACCTCGTTTCTCAAAGCCGGCGACCGGCAAATGTTCACGGTGGAGCTCCGACCCGGCGAGACCACCATAGTCTCCTGGAAGAAGCTCGTCAGGGACACTAACAAGGTCAATGGCCTGCCTCCGCCCACTGCCACTGCCCCTGACCCTCCCCCCAACGCTCACCCTGGCCTCGAGTCTCGTATAGCTCCGGTACAACCGTCTGGAGAGGGAGAGGGAGAGGAAGGGAAAGATGAAGCTGCGCCGAATCGTTTTAGTGCTGTGATTGAGAAGATTGAGCGCCTATATATGGGTAAAGATAGTAGCGACGATGAAGATCAAAATATTCCTGATGACGATCAGTATGATACTGAGGACTCTTTTATTGATGATGCTGAGTTGGATGAATATTTTGAAGTTGATAATTCAGCTATAAAACATGACGGATTCTTTGTTAACAGGGGCCAACTAGAACGGATAAACACAACTGCTGCATTACCTAACCAGCAACCAAAAAAAAGGAGAAGAAAAGAGGCAAAGAGCCCCGGTGAAACTGATGACAGTCACGTGCCAAATAAACAAGCAAAGTTAGGTAAGACAGCCGCAGCAAAGATTACATCGGGACTTGCAAAGAGCTCAACTGCTCTCACTACTATTGCTGTAACCACGGAACACCGTGAAGATGTGAAATTTCAGAATCCATTGAATTCTTCCGGTTATTCATCCACTAAAAAGTCCGCTGATTCTAAAACAGTTATGAATCCTTCTCTTTTGAAAGCATTGGATGGAGATGCTTCTGCACTGCAAGCAGAGGTGAAGGATATTGATAAGTCTAAGTCAGGAATCCTGCTTCCTAAGGACTCGAGTAATAGATTTAAAGATGCCGGTGGGTCCTCTGATGCATCGTATCATAAGTATCATGATAAAAATGCTTATTCGCAAACCAAAACCCAGCCGGGTAGACTATCTAGCAACGCTGATGAGCTGGAATCATCAGTTCGGGCGAAAGTGAAAAATGGGATCCGTCAACTGCCTGACCTTAACCTCTCCGACGGGAAGTACTCTGTTCCAACTACAAAAACTTCACATTTGCATCGAAAGGAGGGTTCTAGTGTAAGGCCCAAGGGTTCGATGCTTGAAAAGGCTATTAGGGAGTTGGAGCGGATGGTTGCAGAATCAAGGCCACCTGCTATGGAGAATGCAGAGGGAGATAATTCATCCCAAGCAATTAAAAGGAGATTGCCTAGAGAAATAAAGATGAAGCTTGCTAAAGTTGCTAGACTAGCGCAGGCTAGCCATGGAAAAATATCAAAAGAGTTACTTAACCGGCTTATGAGTATTCTTGGCCACTTAATACAGCTCAGGACGTTAAAGAGAAACTTAAAGGTTATGATTAGTATGGGTCTATCAGCCAAAAAGGAGAAAGATGACAGGTTTCAACATATCAAGAAGGAAGTTATAGATATGGTTAAGATAAATGTATCCTCTTTGGAGTCTAAGGCATTGGAACAAGCTGGAGCCTCCGATGATTTTCAAGAAATAGCCTCTGGAGCGAAAGAAGTCTCTAAAAGAAAGTTGAGCATGGATCCTGTATTAGAGGACAAGATTTGTGACCTCTATGACCTTTATGTTGATGGGCTGGATGAAGATATAGGTCCACAAATAAGAAAGCTCTATGCTGAGCTAGCGGGATTGTGGCCTAGTGGTTTCATGGACAATCATGGCATCAAAAGTGCAATTTGTCGGGCAAAAGATAGACGGAGGGAGCGATACAGCCAAAATAAAGATCAGGAGAAAATGAGGAGGAAAAAGATGTTGACTCCAAAATTAGAGGAGTCTGTTCGAGTTGACGCAAGTTCAATTCCCCAGCAACAGTATATACGAGAGAGATTGGCAACTGAACCTGGCAGTCATGGTTCAGGAAACAAGCCTGTATCAGGTACAACAGCAGCTGTGAGGATACCCAGTCCAATAAACGGTCCTAGCTTTGATAGGCTTAAACAAGAGAAGCTCAAGGGAAGTGCAAGTAATTCCCCTGATGACACGAGGGTCGCAGATGGTGCATTGGTAAAGAAAAAGGTGAAGAGGAAGCCAGATCAAGAGTTGGATGAAACTCGGATACGGCCAGAAAAATTACCTTCCCAACAAGGTGAGGAAAGACAAAAGTCATTCAAGCAGGCGGTTGGTGTACCCCATAAGTCAAACCATCAATCCACCGGCCTTCCTAGCGCTGAGCAGTCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006325 GO:0006950 GO:0006970 GO:0006996 GO:0008150 GO:0009628 GO:0009651 GO:0009987 GO:0010468 GO:0016043 GO:0019222 GO:0030874 GO:0030875 GO:0031974 GO:0031981 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044454 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051276 GO:0060255 GO:0060968 GO:0065007 GO:0070013 GO:0071824 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HUN

Protein Analysis

754

Amino Acids

83.28

Weight (kDa)

9.17

Isoelectric Point (pI)

44.4

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HUN	PF08729	118 - 164	2.8e-12	HPC2 and ubinuclein domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0003763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G21610 AT1G77310 AT1G77310
fragaria_vesca	FvH4_2g27830 FvH4_2g27830 FvH4_2g27830 FvH4_2g27830
malus_domestica	MD08G1159200.v1.1
prunus_persica	Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1 Prupe.1G489600_v2.0.a1
pyrus_communis	pycom348g00040
rosa_chinensis	RchiOBHm_Chr6g0293421 RchiOBHm_Chr6g0296701
rosa_laevigata	RLG00000011667 RLG00000011669
rosa_multiflora	Rmu_sc0001741.1_g000003 Rmu_sc0001741.1_g000007
rosa_roxburghii	Rroxscaffold_7G00171250
rosa_rugosa	Rorug06G0264500 Rorug06G0264600 Rorug06G0264700
rosa_samantha	Rh6AG376100 Rh6BG384400 Rh6CG362400 Rh6CG389500 Rh6CG389700 Rh6DG376900
rosa_wichuraiana	Rw6G032880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1213
AasI	GACNNNNNNGTC	1 cut(s)	2066
AbsI	CCTCGAGG	1 cut(s)	31
Acc36I	ACCTGC	1 cut(s)	1213
AccBSI	CCGCTC	1 cut(s)	1180
AccI	GTMKAC	1 cut(s)	979
AciI	CCGC	6 cut(s)	164, 621, 756, 1180, 1706, 2198
AclWI	GGATC	4 cut(s)	1033, 1046, 1598, 1611
AcoI	YGGCCR	2 cut(s)	1363, 2141
AcsI	RAATTY	2 cut(s)	707, 724
AcvI	CACGTG	1 cut(s)	586
AfaI	GTAC	4 cut(s)	234, 1079, 1960, 2208
AfeI	AGCGCT	1 cut(s)	2248
AfiI	CCNNNNNNNGG	4 cut(s)	66, 328, 1955, 1994
AgsI	TTSAA	8 cut(s)	434, 724, 793, 1157, 1457, 1553, 1878, 2191
AjnI	CCWGG	3 cut(s)	116, 205, 1921
Alw21I	GWGCWC	2 cut(s)	90, 656
Alw26I	GTCTC	4 cut(s)	95, 118, 222, 1585
AlwI	GGATC	4 cut(s)	1033, 1046, 1598, 1611
AlwNI	CAGNNNCTG	1 cut(s)	1970
Ama87I	CYCGRG	3 cut(s)	31, 212, 880
Aor51HI	AGCGCT	1 cut(s)	2248
ApeKI	GCWGC	4 cut(s)	278, 509, 623, 1967
ApoI	RAATTY	2 cut(s)	707, 724
ArsI	GACNNNNNNTTYG	2 cut(s)	452, 484
AspLEI	GCGC	4 cut(s)	283, 321, 1306, 2249
AspS9I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1673, 1997
AsuC2I	CCSGG	3 cut(s)	96, 564, 975
AsuHPI	GGTGA	5 cut(s)	194, 578, 844, 2110, 2180
AsuNHI	GCTAGC	2 cut(s)	1310, 1702
AvaI	CYCGRG	3 cut(s)	31, 212, 880
AvaII	GGWCC	3 cut(s)	909, 1673, 1997
AxyI	CCTNAGG	1 cut(s)	873
BaeI	ACNNNNGTAYC	2 cut(s)	224, 257
BalI	TGGCCA	1 cut(s)	1365
BamHI	GGATCC	2 cut(s)	1038, 1603
BanII	GRGCYC	3 cut(s)	90, 563, 656
BauI	CACGAG	1 cut(s)	2062
BbrPI	CACGTG	1 cut(s)	586
Bbv12I	GWGCWC	2 cut(s)	90, 656
BbvI	GCAGC	4 cut(s)	265, 496, 635, 1979
BccI	CCATC	5 cut(s)	797, 1177, 1646, 2069, 2232
BceAI	ACGGC	1 cut(s)	2156
BciT130I	CCWGG	3 cut(s)	118, 207, 1923
BciVI	GTATCC	3 cut(s)	1510, 1971, 2130
BcnI	CCSGG	3 cut(s)	96, 564, 975
BcoDI	GTCTC	4 cut(s)	95, 118, 222, 1585
BfoI	RGCGCY	2 cut(s)	322, 2250
BfuAI	ACCTGC	1 cut(s)	1213
BfuI	GTATCC	3 cut(s)	1510, 1971, 2130
BisI	GCNGC	5 cut(s)	279, 510, 621, 624, 1968
BlpI	GCTNAGC	2 cut(s)	1698, 2250
BlsI	GCNGC	5 cut(s)	280, 511, 622, 625, 1969
BmcAI	AGTACT	1 cut(s)	1079
Bme1390I	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1923
Bme18I	GGWCC	3 cut(s)	909, 1673, 1997
BmeT110I	CYCGRG	3 cut(s)	31, 212, 880
BmgT120I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1673, 1997
BmiI	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1537, 1605
BmrFI	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1923
BmrI	ACTGGG	1 cut(s)	1977
BmsI	GCATC	8 cut(s)	400, 799, 889, 907, 929, 1120, 1140, 1752
BmtI	GCTAGC	2 cut(s)	1314, 1706
BmuI	ACTGGG	1 cut(s)	1977
BoxI	GACNNNNGTC	1 cut(s)	2182
BpmI	CTGGAG	3 cut(s)	264, 1554, 1587
Bpu10I	CCTNAGC	1 cut(s)	1379
Bpu1102I	GCTNAGC	2 cut(s)	1698, 2250
BpuEI	CTTGAG	1 cut(s)	2015
BpuMI	CCSGG	3 cut(s)	96, 564, 975
BsaAI	YACGTR	1 cut(s)	586
BsaBI	GATNNNNATC	2 cut(s)	354, 375
BsaI	GGTCTC	1 cut(s)	95
BsaJI	CCNNGG	5 cut(s)	205, 562, 684, 1140, 1315
BsaWI	WCCGGW	2 cut(s)	229, 731
Bsc4I	CCNNNNNNNGG	4 cut(s)	66, 328, 1955, 1994
Bse118I	RCCGGY	6 cut(s)	17, 59, 66, 902, 1344, 2234
Bse1I	ACTGG	1 cut(s)	1983
Bse21I	CCTNAGG	1 cut(s)	873
Bse8I	GATNNNNATC	2 cut(s)	354, 375
BseBI	CCWGG	3 cut(s)	118, 207, 1923
BseDI	CCNNGG	5 cut(s)	205, 562, 684, 1140, 1315
BseGI	GGATG	7 cut(s)	427, 740, 808, 1188, 1235, 1666, 2131
BseJI	GATNNNNATC	2 cut(s)	354, 375
BseLI	CCNNNNNNNGG	4 cut(s)	66, 328, 1955, 1994
BseMII	CTCAG	5 cut(s)	381, 405, 1393, 1689, 2241
BseNI	ACTGG	1 cut(s)	1983
BseRI	GAGGAG	2 cut(s)	1834, 1865
BseXI	GCAGC	4 cut(s)	265, 496, 635, 1979
BseYI	CCCAGC	2 cut(s)	969, 1884
BsgI	GTGCAG	1 cut(s)	801
Bsh1285I	CGRYCG	1 cut(s)	67
BsiEI	CGRYCG	1 cut(s)	67
BsiHKAI	GWGCWC	2 cut(s)	90, 656
BsiHKCI	CYCGRG	3 cut(s)	31, 212, 880
BslFI	GGGAC	2 cut(s)	149, 654
BslI	CCNNNNNNNGG	4 cut(s)	66, 328, 1955, 1994
BsmAI	GTCTC	4 cut(s)	95, 118, 222, 1585
BsmFI	GGGAC	2 cut(s)	149, 654
BsmI	GAATGC	1 cut(s)	1222
Bso31I	GGTCTC	1 cut(s)	95
BsoBI	CYCGRG	3 cut(s)	31, 212, 880
Bsp1286I	GDGCHC	3 cut(s)	90, 563, 656
Bsp143I	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
Bsp1720I	GCTNAGC	2 cut(s)	1698, 2250
Bsp19I	CCATGG	1 cut(s)	1315
BspACI	CCGC	6 cut(s)	164, 621, 756, 1180, 1706, 2198
BspCNI	CTCAG	5 cut(s)	382, 406, 1392, 1690, 2242
BspHI	TCATGA	1 cut(s)	937
BspLI	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1537, 1605
BspMI	ACCTGC	1 cut(s)	1213
BspOI	GCTAGC	2 cut(s)	1314, 1706
BspPI	GGATC	4 cut(s)	1033, 1046, 1598, 1611
BspTNI	GGTCTC	1 cut(s)	95
BsrBI	CCGCTC	1 cut(s)	1180
BsrFI	RCCGGY	6 cut(s)	17, 59, 66, 902, 1344, 2234
BsrI	ACTGG	1 cut(s)	1983
BssAI	RCCGGY	6 cut(s)	17, 59, 66, 902, 1344, 2234
BssECI	CCNNGG	5 cut(s)	205, 562, 684, 1140, 1315
BssMI	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
BssSI	CACGAG	1 cut(s)	2062
BssT1I	CCWWGG	2 cut(s)	1140, 1315
Bst2BI	CACGAG	1 cut(s)	2062
Bst2UI	CCWGG	3 cut(s)	118, 207, 1923
Bst4CI	ACNGT	7 cut(s)	82, 240, 581, 695, 772, 1893, 1997
Bst6I	CTCTTC	1 cut(s)	2096
BstAPI	GCANNNNNTGC	1 cut(s)	2078
BstBAI	YACGTR	1 cut(s)	586
BstC8I	GCNNGC	9 cut(s)	19, 61, 158, 825, 1284, 1308, 1312, 1704, 2196
BstDEI	CTNAG	8 cut(s)	390, 414, 852, 873, 1379, 1515, 1698, 2250
BstDSI	CCRYGG	2 cut(s)	684, 1315
BstENI	CCTNNNNNAGG	1 cut(s)	1953
BstF5I	GGATG	7 cut(s)	427, 740, 808, 1188, 1235, 1666, 2131
BstH2I	RGCGCY	2 cut(s)	322, 2250
BstHHI	GCGC	4 cut(s)	283, 321, 1306, 2249
BstKTI	GATC	6 cut(s)	358, 379, 1041, 1606, 1807, 2116
BstMAI	GTCTC	4 cut(s)	95, 118, 222, 1585
BstMBI	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
BstMCI	CGRYCG	1 cut(s)	67
BstMWI	GCNNNNNNNGC	7 cut(s)	824, 1292, 1301, 1568, 1703, 2078, 2244
BstNI	CCWGG	3 cut(s)	118, 207, 1923
BstPAI	GACNNNNGTC	1 cut(s)	2182
BstSCI	CCNGG	6 cut(s)	94, 116, 205, 562, 973, 1921
BstV1I	GCAGC	4 cut(s)	265, 496, 635, 1979
BstX2I	RGATCY	2 cut(s)	1038, 1603
BstYI	RGATCY	2 cut(s)	1038, 1603
Bsu36I	CCTNAGG	1 cut(s)	873
BsuI	GTATCC	3 cut(s)	1510, 1971, 2130
BtgI	CCRYGG	2 cut(s)	684, 1315
BtsCI	GGATG	7 cut(s)	427, 740, 808, 1188, 1235, 1666, 2131
BtsI	GCAGTG	3 cut(s)	168, 174, 818
BtsIMutI	CAGTG	3 cut(s)	168, 174, 818
BveI	ACCTGC	1 cut(s)	1213
Cac8I	GCNNGC	9 cut(s)	19, 61, 158, 825, 1284, 1308, 1312, 1704, 2196
CaiI	CAGNNNCTG	1 cut(s)	1970
CciI	TCATGA	1 cut(s)	937
CfoI	GCGC	4 cut(s)	283, 321, 1306, 2249
Cfr10I	RCCGGY	6 cut(s)	17, 59, 66, 902, 1344, 2234
Cfr13I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1673, 1997
CseI	GACGC	1 cut(s)	1877
Csp6I	GTAC	4 cut(s)	233, 1078, 1959, 2207
CviAII	CATG	7 cut(s)	458, 938, 1316, 1600, 1729, 1739, 1931
CviQI	GTAC	4 cut(s)	233, 1078, 1959, 2207
DdeI	CTNAG	8 cut(s)	390, 414, 852, 873, 1379, 1515, 1698, 2250
DpnI	GATC	6 cut(s)	357, 378, 1040, 1605, 1806, 2115
DpnII	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
DraI	TTTAAA	1 cut(s)	895
DrdI	GACNNNNNNGTC	1 cut(s)	2066
DseDI	GACNNNNNNGTC	1 cut(s)	2066
EaeI	YGGCCR	2 cut(s)	1363, 2141
Eam1104I	CTCTTC	1 cut(s)	2096
EarI	CTCTTC	1 cut(s)	2096
EciI	GGCGGA	1 cut(s)	153
Ecl136II	GAGCTC	2 cut(s)	88, 654
Eco130I	CCWWGG	2 cut(s)	1140, 1315
Eco24I	GRGCYC	3 cut(s)	90, 563, 656
Eco31I	GGTCTC	1 cut(s)	95
Eco47I	GGWCC	3 cut(s)	909, 1673, 1997
Eco47III	AGCGCT	1 cut(s)	2248
Eco53kI	GAGCTC	2 cut(s)	88, 654
Eco72I	CACGTG	1 cut(s)	586
Eco81I	CCTNAGG	1 cut(s)	873
Eco88I	CYCGRG	3 cut(s)	31, 212, 880
EcoICRI	GAGCTC	2 cut(s)	88, 654
EcoNI	CCTNNNNNAGG	1 cut(s)	1953
EcoO109I	RGGNCCY	2 cut(s)	36, 909
EcoRI	GAATTC	1 cut(s)	724
EcoRII	CCWGG	3 cut(s)	116, 205, 1921
EcoT14I	CCWWGG	2 cut(s)	1140, 1315
EcoT22I	ATGCAT	1 cut(s)	922
EcoT38I	GRGCYC	3 cut(s)	90, 563, 656
ErhI	CCWWGG	2 cut(s)	1140, 1315
FaeI	CATG	7 cut(s)	461, 941, 1319, 1603, 1732, 1742, 1934
FalI	AAGNNNNNCTT	4 cut(s)	1323, 1355, 1382, 1414
FaqI	GGGAC	2 cut(s)	149, 654
FatI	CATG	7 cut(s)	457, 937, 1315, 1599, 1728, 1738, 1930
FauI	CCCGC	1 cut(s)	1699
FblI	GTMKAC	1 cut(s)	979
Fnu4HI	GCNGC	5 cut(s)	279, 510, 621, 624, 1968
FokI	GGATG	7 cut(s)	434, 727, 815, 1195, 1222, 1673, 2138
FriOI	GRGCYC	3 cut(s)	90, 563, 656
FseI	GGCCGGCC	1 cut(s)	21
Fsp4HI	GCNGC	5 cut(s)	279, 510, 621, 624, 1968
GlaI	GCGC	4 cut(s)	282, 320, 1305, 2248
GluI	GCNGC	5 cut(s)	279, 510, 621, 624, 1968
GsaI	CCCAGC	2 cut(s)	973, 1888
GsuI	CTGGAG	3 cut(s)	264, 1554, 1587
HaeII	RGCGCY	2 cut(s)	322, 2250
HgaI	GACGC	1 cut(s)	1877
HhaI	GCGC	4 cut(s)	283, 321, 1306, 2249
Hin1II	CATG	7 cut(s)	461, 941, 1319, 1603, 1732, 1742, 1934
Hin6I	GCGC	4 cut(s)	281, 319, 1304, 2247
HinP1I	GCGC	4 cut(s)	281, 319, 1304, 2247
HincII	GTYRAC	4 cut(s)	475, 1046, 1836, 1867
HindII	GTYRAC	4 cut(s)	475, 1046, 1836, 1867
HindIII	AAGCTT	1 cut(s)	1280
HpaI	GTTAAC	1 cut(s)	475
HphI	GGTGA	5 cut(s)	194, 578, 844, 2110, 2180
Hpy166II	GTNNAC	8 cut(s)	78, 475, 980, 1046, 1676, 1836, 1867, 2207
Hpy188I	TCNGA	6 cut(s)	92, 714, 916, 1069, 1543, 2136
Hpy8I	GTNNAC	8 cut(s)	78, 475, 980, 1046, 1676, 1836, 1867, 2207
Hpy99I	CGWCG	2 cut(s)	350, 1073
HpyAV	CCTTC	7 cut(s)	7, 257, 792, 829, 1462, 2166, 2249
HpyCH4III	ACNGT	7 cut(s)	82, 240, 581, 695, 772, 1893, 1997
HpyCH4IV	ACGT	2 cut(s)	585, 1385
HpyF10VI	GCNNNNNNNGC	7 cut(s)	824, 1292, 1301, 1568, 1703, 2078, 2244
HpyF3I	CTNAG	8 cut(s)	390, 414, 852, 873, 1379, 1515, 1698, 2250
HpySE526I	ACGT	2 cut(s)	585, 1385
Hsp92II	CATG	7 cut(s)	461, 941, 1319, 1603, 1732, 1742, 1934
HspAI	GCGC	4 cut(s)	281, 319, 1304, 2247
KroI	GCCGGC	2 cut(s)	17, 59
KroNI	GCCGGC	2 cut(s)	19, 61
KspAI	GTTAAC	1 cut(s)	475
Kzo9I	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
LmnI	GCTCC	7 cut(s)	85, 93, 232, 1177, 1535, 1568, 1783
Lsp1109I	GCAGC	4 cut(s)	265, 496, 635, 1979
LweI	GCATC	8 cut(s)	400, 799, 889, 907, 929, 1120, 1140, 1752
MaeII	ACGT	2 cut(s)	585, 1385
MaeIII	GTNAC	4 cut(s)	581, 679, 1335, 1628
MalI	GATC	6 cut(s)	357, 378, 1040, 1605, 1806, 2115
MbiI	CCGCTC	1 cut(s)	1180
MboI	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
MboII	GAAGA	8 cut(s)	133, 322, 365, 555, 710, 720, 1676, 2113
MflI	RGATCY	2 cut(s)	1038, 1603
MhlI	GDGCHC	3 cut(s)	90, 563, 656
MlsI	TGGCCA	1 cut(s)	1365
MluNI	TGGCCA	1 cut(s)	1365
MlyI	GAGTC	6 cut(s)	224, 389, 872, 1520, 1831, 1862
MmeI	TCCRAC	6 cut(s)	115, 399, 1092, 1112, 1155, 2103
Mox20I	TGGCCA	1 cut(s)	1365
Mph1103I	ATGCAT	1 cut(s)	922
MroNI	GCCGGC	2 cut(s)	17, 59
MscI	TGGCCA	1 cut(s)	1365
Msp20I	TGGCCA	1 cut(s)	1365
MspA1I	CMGCKG	2 cut(s)	758, 1970
MspR9I	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1923
Mva1269I	GAATGC	1 cut(s)	1222
MvaI	CCWGG	3 cut(s)	118, 207, 1923
MwoI	GCNNNNNNNGC	7 cut(s)	824, 1292, 1301, 1568, 1703, 2078, 2244
NaeI	GCCGGC	2 cut(s)	19, 61
NciI	CCSGG	3 cut(s)	96, 564, 975
NcoI	CCATGG	1 cut(s)	1315
NdeII	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
NgoMIV	GCCGGC	2 cut(s)	17, 59
NheI	GCTAGC	2 cut(s)	1310, 1702
NlaIII	CATG	7 cut(s)	461, 941, 1319, 1603, 1732, 1742, 1934
NlaIV	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1537, 1605
NmuCI	GTSAC	2 cut(s)	581, 1628
NsiI	ATGCAT	1 cut(s)	922
PaeR7I	CTCGAG	3 cut(s)	31, 212, 880
PagI	TCATGA	1 cut(s)	937
PaqCI	CACCTGC	1 cut(s)	1213
PcsI	WCGNNNNNNNCGW	1 cut(s)	1783
PctI	GAATGC	1 cut(s)	1222
PdiI	GCCGGC	2 cut(s)	19, 61
PfeI	GAWTC	9 cut(s)	26, 286, 465, 715, 761, 778, 861, 1007, 1193
PfoI	TCCNGGA	1 cut(s)	116
PkrI	GCNGC	5 cut(s)	280, 511, 622, 625, 1969
PleI	GAGTC	6 cut(s)	223, 389, 872, 1519, 1831, 1861
PmaCI	CACGTG	1 cut(s)	586
PmlI	CACGTG	1 cut(s)	586
PpsI	GAGTC	6 cut(s)	223, 389, 872, 1519, 1831, 1861
Ppu21I	YACGTR	1 cut(s)	586
PpuMI	RGGWCCY	1 cut(s)	909
PshAI	GACNNNNGTC	1 cut(s)	2182
Psp124BI	GAGCTC	2 cut(s)	90, 656
Psp5II	RGGWCCY	1 cut(s)	909
Psp6I	CCWGG	3 cut(s)	116, 205, 1921
PspCI	CACGTG	1 cut(s)	586
PspFI	CCCAGC	2 cut(s)	969, 1884
PspGI	CCWGG	3 cut(s)	116, 205, 1921
PspN4I	GGNNCC	6 cut(s)	22, 482, 910, 1040, 1537, 1605
PspPI	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1673, 1997
PspPPI	RGGWCCY	1 cut(s)	909
PspXI	VCTCGAGB	3 cut(s)	31, 212, 880
PstNI	CAGNNNCTG	1 cut(s)	1970
PsuI	RGATCY	2 cut(s)	1038, 1603
PvuII	CAGCTG	1 cut(s)	1970
RigI	GGCCGGCC	1 cut(s)	21
RsaI	GTAC	4 cut(s)	234, 1079, 1960, 2208
RsaNI	GTAC	4 cut(s)	233, 1078, 1959, 2207
SacI	GAGCTC	2 cut(s)	90, 656
SatI	GCNGC	5 cut(s)	279, 510, 621, 624, 1968
Sau3AI	GATC	6 cut(s)	355, 376, 1038, 1603, 1804, 2113
Sau96I	GGNCC	7 cut(s)	20, 36, 481, 909, 1137, 1673, 1997
ScaI	AGTACT	1 cut(s)	1079
SchI	GAGTC	6 cut(s)	224, 389, 872, 1520, 1831, 1862
ScrFI	CCNGG	6 cut(s)	96, 118, 207, 564, 975, 1923
SduI	GDGCHC	3 cut(s)	90, 563, 656
SfaNI	GCATC	8 cut(s)	400, 799, 889, 907, 929, 1120, 1140, 1752
Sfr274I	CTCGAG	3 cut(s)	31, 212, 880
SinI	GGWCC	3 cut(s)	909, 1673, 1997
SlaI	CTCGAG	3 cut(s)	31, 212, 880
SmlI	CTYRAG	4 cut(s)	31, 212, 880, 2030
SmoI	CTYRAG	4 cut(s)	31, 212, 880, 2030
SsiI	CCGC	6 cut(s)	164, 621, 756, 1180, 1706, 2198
SspI	AATATT	2 cut(s)	364, 428
SstI	GAGCTC	2 cut(s)	90, 656
StyD4I	CCNGG	6 cut(s)	94, 116, 205, 562, 973, 1921
StyI	CCWWGG	2 cut(s)	1140, 1315
TaaI	ACNGT	7 cut(s)	82, 240, 581, 695, 772, 1893, 1997
TaiI	ACGT	2 cut(s)	588, 1388
TaqI	TCGA	6 cut(s)	32, 213, 881, 1114, 1148, 1861
TatI	WGTACW	1 cut(s)	1077
TauI	GCSGC	1 cut(s)	623
TfiI	GAWTC	9 cut(s)	26, 286, 465, 715, 761, 778, 861, 1007, 1193
TscAI	CASTG	3 cut(s)	175, 181, 825
TseFI	GTSAC	2 cut(s)	581, 1628
TseI	GCWGC	4 cut(s)	278, 509, 623, 1967
Tsp45I	GTSAC	2 cut(s)	581, 1628
TspGWI	ACGGA	5 cut(s)	477, 508, 701, 1031, 1792
TspRI	CASTG	3 cut(s)	175, 181, 825
VpaK11BI	GGWCC	3 cut(s)	909, 1673, 1997
XagI	CCTNNNNNAGG	1 cut(s)	1953
XapI	RAATTY	2 cut(s)	707, 724
XhoI	CTCGAG	3 cut(s)	31, 212, 880
XmiI	GTMKAC	1 cut(s)	979
ZrmI	AGTACT	1 cut(s)	1079
Zsp2I	ATGCAT	1 cut(s)	922

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.