Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0011715

Physical Location & Seq

Genomic Coordinates Forward (+)

31587312 .. 31589699

Gene Structure 2388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1251000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 630 bp

ATGGCAGAAGAAGAACTCTCACCGCGGCAATCTTTGTTGGTGGATTGTTCATTTTGGTGTGACCAAGCTATGGCAGAAGAAGAACTCAACAGCTCTTTAGAGTATATACCGACATGGGTGTTGATGCTTTTAGGGTTCATTTTCCTTCTCCTAACTATATCTCAGCGTTCCATAATCCGCATATGCATCCCCTCTAATCTAGCAAATCACATGCTTCCGTGCAAGAGGGAAACTTCTGAGGGAAACAATAATGCACATTACTCTCTTGATCAATCTATAAACAACCGGTGGCGGTTTTTGTCTGCAGATACAAATTCAGACCATTGTCTGCAAAAGGGGAAGGTTCCGTTGTTATCATTGGAAGCACTACATCATCTACACATCTTCATCTTTGTATTGGCAGTTGTGCATGTGATCTTTTGTGTCACAACTATGGTTCTTGGAGGGGCAAGGGTACGTCAATGGAAGGACTGGGAGGATTCTGTTAGGCAGGATATTACAAAATCTGATCCAACTAGTGGTGGAAATGTGCATGTTTCTCAACGCCAACATCATGAATTCTTCTGTAAACGAGGAGTAGGATATTGGCGAAGAGCAGCTATCATAGGTTGGGTGGTGAGTTTGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000271 GO:0000902 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005794 GO:0005802 GO:0005886 GO:0005975 GO:0005976 GO:0006073 GO:0006950 GO:0006970 GO:0006972 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0008150 GO:0008152 GO:0008810 GO:0009058 GO:0009059 GO:0009250 GO:0009504 GO:0009628 GO:0009651 GO:0009653 GO:0009719 GO:0009725 GO:0009735 GO:0009826 GO:0009987 GO:0010033 GO:0012505 GO:0016020 GO:0016043 GO:0016049 GO:0016051 GO:0016787 GO:0016798 GO:0030243 GO:0030244 GO:0030865 GO:0031122 GO:0031410 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0032989 GO:0033692 GO:0034637 GO:0034645 GO:0040007 GO:0042221 GO:0042538 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043622 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0048367 GO:0048589 GO:0048731 GO:0048856 GO:0048869 GO:0050896 GO:0051273 GO:0051274 GO:0060560 GO:0071704 GO:0071840 GO:0071944 GO:0097435 GO:0097708 GO:0098791 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_9 Mlo

Protein Analysis

210

Amino Acids

23.96

Weight (kDa)

6.54

Isoelectric Point (pI)

46.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mlo	PF03094	26 - 208	2.2e-45	Mlo family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011715)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24250 AT4G24250
fragaria_vesca	FvH4_3g13171 FvH4_5g27121 FvH4_5g27121
malus_domestica	MD08G1246900.v1.1 MD08G1251000.v1.1
prunus_persica	Prupe.1G588000_v2.0.a1
pyrus_communis	pycom08g21400 pycom08g21750
rosa_chinensis	RchiOBHm_Chr7g0218121
rosa_laevigata	RLG00000002398
rosa_multiflora	Rmu_sc0003627.1_g000013
rosa_roxburghii	Rroxscaffold_3G00241290
rosa_rugosa	Rorug07G0174300
rosa_samantha	Rh7AG316700 Rh7BG307800 Rh7CG333600 Rh7DG315600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	70, 518
AccII	CGCG	1 cut(s)	25
AciI	CCGC	4 cut(s)	23, 25, 178, 292
AclWI	GGATC	1 cut(s)	503
AcsI	RAATTY	2 cut(s)	313, 557
AfaI	GTAC	1 cut(s)	456
AfiI	CCNNNNNNNGG	2 cut(s)	70, 518
AgeI	ACCGGT	1 cut(s)	285
AhlI	ACTAGT	1 cut(s)	515
AluBI	AGCT	3 cut(s)	68, 93, 599
AluI	AGCT	3 cut(s)	68, 93, 599
AlwI	GGATC	1 cut(s)	503
ApeKI	GCWGC	1 cut(s)	596
ApoI	RAATTY	2 cut(s)	313, 557
AsiGI	ACCGGT	1 cut(s)	285
AsuHPI	GGTGA	2 cut(s)	12, 628
BbvI	GCAGC	1 cut(s)	608
BclI	TGATCA	1 cut(s)	268
BcuI	ACTAGT	1 cut(s)	515
BfaI	CTAG	2 cut(s)	200, 516
BfmI	CTRYAG	2 cut(s)	303, 626
BisI	GCNGC	2 cut(s)	26, 597
BlsI	GCNGC	2 cut(s)	27, 598
BmiI	GGNNCC	1 cut(s)	345
BmrI	ACTGGG	1 cut(s)	481
BmsI	GCATC	2 cut(s)	114, 195
BmuI	ACTGGG	1 cut(s)	481
BoxI	GACNNNNGTC	1 cut(s)	324
BsaJI	CCNNGG	1 cut(s)	23
BsaWI	WCCGGW	1 cut(s)	285
Bsc4I	CCNNNNNNNGG	2 cut(s)	70, 518
Bse118I	RCCGGY	1 cut(s)	285
Bse1I	ACTGG	1 cut(s)	476
BseDI	CCNNGG	1 cut(s)	23
BseGI	GGATG	1 cut(s)	186
BseLI	CCNNNNNNNGG	2 cut(s)	70, 518
BseMII	CTCAG	2 cut(s)	176, 228
BseNI	ACTGG	1 cut(s)	476
BseRI	GAGGAG	1 cut(s)	588
BseXI	GCAGC	1 cut(s)	608
Bsh1236I	CGCG	1 cut(s)	25
BshTI	ACCGGT	1 cut(s)	285
BsiSI	CCGG	1 cut(s)	286
BslI	CCNNNNNNNGG	2 cut(s)	70, 518
Bsp143I	GATC	3 cut(s)	268, 414, 508
BspACI	CCGC	4 cut(s)	23, 25, 178, 292
BspCNI	CTCAG	2 cut(s)	175, 229
BspFNI	CGCG	1 cut(s)	25
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	1 cut(s)	345
BspMAI	CTGCAG	1 cut(s)	307
BspPI	GGATC	1 cut(s)	503
BspQI	GCTCTTC	1 cut(s)	586
BsrFI	RCCGGY	1 cut(s)	285
BsrI	ACTGG	1 cut(s)	476
BssAI	RCCGGY	1 cut(s)	285
BssECI	CCNNGG	1 cut(s)	23
BssMI	GATC	3 cut(s)	268, 414, 508
Bst6I	CTCTTC	1 cut(s)	586
BstDEI	CTNAG	2 cut(s)	162, 237
BstDSI	CCRYGG	1 cut(s)	23
BstF5I	GGATG	1 cut(s)	186
BstFNI	CGCG	1 cut(s)	25
BstKTI	GATC	3 cut(s)	271, 417, 511
BstMBI	GATC	3 cut(s)	268, 414, 508
BstNSI	RCATGY	3 cut(s)	214, 413, 536
BstPAI	GACNNNNGTC	1 cut(s)	324
BstSFI	CTRYAG	2 cut(s)	303, 626
BstUI	CGCG	1 cut(s)	25
BstV1I	GCAGC	1 cut(s)	608
BtgI	CCRYGG	1 cut(s)	23
BtsCI	GGATG	1 cut(s)	186
CciI	TCATGA	1 cut(s)	553
Cfr10I	RCCGGY	1 cut(s)	285
Cfr42I	CCGCGG	1 cut(s)	26
Csp6I	GTAC	1 cut(s)	455
CspAI	ACCGGT	1 cut(s)	285
CviAII	CATG	5 cut(s)	114, 211, 410, 533, 554
CviJI	RGCY	3 cut(s)	68, 93, 599
CviKI_1	RGCY	3 cut(s)	68, 93, 599
CviQI	GTAC	1 cut(s)	455
DdeI	CTNAG	2 cut(s)	162, 237
DpnI	GATC	3 cut(s)	270, 416, 510
DpnII	GATC	3 cut(s)	268, 414, 508
Eam1104I	CTCTTC	1 cut(s)	586
EarI	CTCTTC	1 cut(s)	586
EcoRI	GAATTC	1 cut(s)	557
EcoT22I	ATGCAT	1 cut(s)	188
FaeI	CATG	5 cut(s)	117, 214, 413, 536, 557
FatI	CATG	5 cut(s)	113, 210, 409, 532, 553
FauNDI	CATATG	1 cut(s)	182
FbaI	TGATCA	1 cut(s)	268
Fnu4HI	GCNGC	2 cut(s)	26, 597
FokI	GGATG	1 cut(s)	173
Fsp4HI	GCNGC	2 cut(s)	26, 597
FspBI	CTAG	2 cut(s)	200, 516
GluI	GCNGC	2 cut(s)	26, 597
HapII	CCGG	1 cut(s)	286
Hin1II	CATG	5 cut(s)	117, 214, 413, 536, 557
HinfI	GANTC	1 cut(s)	479
HpaII	CCGG	1 cut(s)	286
HphI	GGTGA	2 cut(s)	12, 628
Hpy166II	GTNNAC	1 cut(s)	569
Hpy188I	TCNGA	3 cut(s)	238, 319, 508
Hpy188III	TCNNGA	2 cut(s)	266, 554
Hpy8I	GTNNAC	1 cut(s)	569
HpyAV	CCTTC	3 cut(s)	155, 334, 460
HpyCH4IV	ACGT	1 cut(s)	457
HpyCH4V	TGCA	7 cut(s)	186, 222, 254, 305, 331, 409, 532
HpyF3I	CTNAG	2 cut(s)	162, 237
HpySE526I	ACGT	1 cut(s)	457
Hsp92II	CATG	5 cut(s)	117, 214, 413, 536, 557
Ksp22I	TGATCA	1 cut(s)	268
KspI	CCGCGG	1 cut(s)	26
Kzo9I	GATC	3 cut(s)	268, 414, 508
LguI	GCTCTTC	1 cut(s)	586
LpnPI	CCDG	3 cut(s)	299, 457, 476
Lsp1109I	GCAGC	1 cut(s)	608
LweI	GCATC	2 cut(s)	114, 195
MaeI	CTAG	2 cut(s)	200, 516
MaeII	ACGT	1 cut(s)	457
MaeIII	GTNAC	2 cut(s)	59, 424
MalI	GATC	3 cut(s)	270, 416, 510
MboI	GATC	3 cut(s)	268, 414, 508
MboII	GAAGA	7 cut(s)	20, 23, 89, 92, 376, 553, 603
MluCI	AATT	2 cut(s)	313, 557
MmeI	TCCRAC	1 cut(s)	536
MnlI	CCTC	6 cut(s)	202, 219, 232, 437, 469, 566
Mph1103I	ATGCAT	1 cut(s)	188
MslI	CAYNNNNRTG	2 cut(s)	55, 431
MspA1I	CMGCKG	1 cut(s)	25
MspI	CCGG	1 cut(s)	286
MvnI	CGCG	1 cut(s)	25
NdeI	CATATG	1 cut(s)	182
NdeII	GATC	3 cut(s)	268, 414, 508
NlaIII	CATG	5 cut(s)	117, 214, 413, 536, 557
NlaIV	GGNNCC	1 cut(s)	345
NmuCI	GTSAC	2 cut(s)	59, 424
NsiI	ATGCAT	1 cut(s)	188
NspI	RCATGY	3 cut(s)	214, 413, 536
PagI	TCATGA	1 cut(s)	553
PciSI	GCTCTTC	1 cut(s)	586
PfeI	GAWTC	1 cut(s)	479
PflMI	CCANNNNNTGG	2 cut(s)	70, 518
PinAI	ACCGGT	1 cut(s)	285
PkrI	GCNGC	2 cut(s)	27, 598
PshAI	GACNNNNGTC	1 cut(s)	324
PspN4I	GGNNCC	1 cut(s)	345
PstI	CTGCAG	1 cut(s)	307
RsaI	GTAC	1 cut(s)	456
RsaNI	GTAC	1 cut(s)	455
RseI	CAYNNNNRTG	2 cut(s)	55, 431
SacII	CCGCGG	1 cut(s)	26
SapI	GCTCTTC	1 cut(s)	586
SatI	GCNGC	2 cut(s)	26, 597
Sau3AI	GATC	3 cut(s)	268, 414, 508
SetI	ASST	6 cut(s)	70, 95, 345, 460, 601, 610
SfaNI	GCATC	2 cut(s)	114, 195
SfcI	CTRYAG	2 cut(s)	303, 626
Sfr303I	CCGCGG	1 cut(s)	26
SgrBI	CCGCGG	1 cut(s)	26
SmiMI	CAYNNNNRTG	2 cut(s)	55, 431
SpeI	ACTAGT	1 cut(s)	515
Sse9I	AATT	2 cut(s)	313, 557
SsiI	CCGC	4 cut(s)	23, 25, 178, 292
SspMI	CTAG	2 cut(s)	200, 516
TaiI	ACGT	1 cut(s)	460
TasI	AATT	2 cut(s)	313, 557
TauI	GCSGC	1 cut(s)	28
TfiI	GAWTC	1 cut(s)	479
TseFI	GTSAC	2 cut(s)	59, 424
TseI	GCWGC	1 cut(s)	596
Tsp45I	GTSAC	2 cut(s)	59, 424
TspDTI	ATGAA	4 cut(s)	39, 127, 376, 570
TspGWI	ACGGA	2 cut(s)	207, 336
Van91I	CCANNNNNTGG	2 cut(s)	70, 518
XapI	RAATTY	2 cut(s)	313, 557
XceI	RCATGY	3 cut(s)	214, 413, 536
XspI	CTAG	2 cut(s)	200, 516
Zsp2I	ATGCAT	1 cut(s)	188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.