pycom08g21750

Endoglucanase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
21170586 .. 21171971
1386 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g21750.2

Sequence Viewer

Length: 375 bp
ATGCTTTTAGGGTTCATTTCCCTTCTACTAACTGTATCTCAGCGTTCCATAATCCGCATATGCATCCCCTCTAATCTAGCAAATCACATGCTTCCGTGCAAGAGGGAAACTTCTGAGGGAAACAATAACGCACATTACTCTCTCGATCAATCTATAAACAACCGGCGGCGGCTTTTGTCTGCAGATACAAATTCAGACCATTGTCTGCAAAAGGGGAAGGCTCCATTGTTATCATTGGAAGCACTACATCATCTACACATCTTCATCTTTGTATTGGCAGTTGTTCATGTGATCTTTTGTGTCACTACTATGGTTCTTGGAGGGGCAAGGGTACGTCAATGGAAGCACTGGGAGGATTCTGTTAGATCCAACTAG

Protein Analysis

125

Amino Acids

14.05

Weight (kDa)

9.43

Isoelectric Point (pI)

48.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011715)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 55, 166, 169
AclWI GGATC 1 cut(s) 360
AcsI RAATTY 1 cut(s) 190
AfaI GTAC 1 cut(s) 333
AlwI GGATC 1 cut(s) 360
ApoI RAATTY 1 cut(s) 190
BfaI CTAG 2 cut(s) 77, 373
BfmI CTRYAG 1 cut(s) 180
BisI GCNGC 2 cut(s) 167, 170
BlsI GCNGC 2 cut(s) 168, 171
BmiI GGNNCC 1 cut(s) 222
BmrI ACTGGG 1 cut(s) 358
BmsI GCATC 1 cut(s) 72
BmuI ACTGGG 1 cut(s) 358
BoxI GACNNNNGTC 1 cut(s) 201
Bse118I RCCGGY 1 cut(s) 162
Bse1I ACTGG 1 cut(s) 353
BseGI GGATG 1 cut(s) 63
BseMII CTCAG 2 cut(s) 53, 105
BseNI ACTGG 1 cut(s) 353
BsiSI CCGG 1 cut(s) 163
Bsp143I GATC 3 cut(s) 145, 291, 365
BspACI CCGC 3 cut(s) 55, 166, 169
BspCNI CTCAG 2 cut(s) 52, 106
BspLI GGNNCC 1 cut(s) 222
BspMAI CTGCAG 1 cut(s) 184
BspPI GGATC 1 cut(s) 360
BsrFI RCCGGY 1 cut(s) 162
BsrI ACTGG 1 cut(s) 353
BssAI RCCGGY 1 cut(s) 162
BssMI GATC 3 cut(s) 145, 291, 365
Bst4CI ACNGT 1 cut(s) 34
BstDEI CTNAG 2 cut(s) 39, 114
BstF5I GGATG 1 cut(s) 63
BstKTI GATC 3 cut(s) 148, 294, 368
BstMBI GATC 3 cut(s) 145, 291, 365
BstNSI RCATGY 1 cut(s) 91
BstPAI GACNNNNGTC 1 cut(s) 201
BstSFI CTRYAG 1 cut(s) 180
BstX2I RGATCY 1 cut(s) 365
BstYI RGATCY 1 cut(s) 365
BtsCI GGATG 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 346
Cfr10I RCCGGY 1 cut(s) 162
Csp6I GTAC 1 cut(s) 332
CviAII CATG 2 cut(s) 88, 287
CviJI RGCY 2 cut(s) 172, 221
CviKI_1 RGCY 2 cut(s) 172, 221
CviQI GTAC 1 cut(s) 332
DdeI CTNAG 2 cut(s) 39, 114
DpnI GATC 3 cut(s) 147, 293, 367
DpnII GATC 3 cut(s) 145, 291, 365
EcoT22I ATGCAT 1 cut(s) 65
FaeI CATG 2 cut(s) 91, 290
FaiI YATR 7 cut(s) 50, 59, 61, 89, 155, 288, 311
FatI CATG 2 cut(s) 87, 286
FauNDI CATATG 1 cut(s) 59
Fnu4HI GCNGC 2 cut(s) 167, 170
FokI GGATG 1 cut(s) 50
Fsp4HI GCNGC 2 cut(s) 167, 170
FspBI CTAG 2 cut(s) 77, 373
GluI GCNGC 2 cut(s) 167, 170
HapII CCGG 1 cut(s) 163
Hin1II CATG 2 cut(s) 91, 290
HinfI GANTC 1 cut(s) 356
HpaII CCGG 1 cut(s) 163
Hpy188I TCNGA 2 cut(s) 115, 196
Hpy188III TCNNGA 1 cut(s) 143
HpyAV CCTTC 2 cut(s) 32, 211
HpyCH4III ACNGT 1 cut(s) 34
HpyCH4IV ACGT 1 cut(s) 334
HpyCH4V TGCA 4 cut(s) 63, 99, 182, 208
HpyF3I CTNAG 2 cut(s) 39, 114
HpySE526I ACGT 1 cut(s) 334
Hsp92II CATG 2 cut(s) 91, 290
Kzo9I GATC 3 cut(s) 145, 291, 365
LmnI GCTCC 1 cut(s) 226
LpnPI CCDG 2 cut(s) 176, 334
LweI GCATC 1 cut(s) 72
MaeI CTAG 2 cut(s) 77, 373
MaeII ACGT 1 cut(s) 334
MaeIII GTNAC 1 cut(s) 301
MalI GATC 3 cut(s) 147, 293, 367
MboI GATC 3 cut(s) 145, 291, 365
MboII GAAGA 1 cut(s) 253
MflI RGATCY 1 cut(s) 365
MluCI AATT 1 cut(s) 190
MnlI CCTC 5 cut(s) 79, 96, 109, 314, 346
Mph1103I ATGCAT 1 cut(s) 65
MslI CAYNNNNRTG 1 cut(s) 308
MspI CCGG 1 cut(s) 163
NdeI CATATG 1 cut(s) 59
NdeII GATC 3 cut(s) 145, 291, 365
NlaIII CATG 2 cut(s) 91, 290
NlaIV GGNNCC 1 cut(s) 222
NmuCI GTSAC 1 cut(s) 301
NsiI ATGCAT 1 cut(s) 65
NspI RCATGY 1 cut(s) 91
PfeI GAWTC 1 cut(s) 356
PkrI GCNGC 2 cut(s) 168, 171
PshAI GACNNNNGTC 1 cut(s) 201
PspN4I GGNNCC 1 cut(s) 222
PstI CTGCAG 1 cut(s) 184
PsuI RGATCY 1 cut(s) 365
RsaI GTAC 1 cut(s) 333
RsaNI GTAC 1 cut(s) 332
RseI CAYNNNNRTG 1 cut(s) 308
SatI GCNGC 2 cut(s) 167, 170
Sau3AI GATC 3 cut(s) 145, 291, 365
SetI ASST 1 cut(s) 337
SfaNI GCATC 1 cut(s) 72
SfcI CTRYAG 1 cut(s) 180
SmiMI CAYNNNNRTG 1 cut(s) 308
Sse9I AATT 1 cut(s) 190
SsiI CCGC 3 cut(s) 55, 166, 169
SspMI CTAG 2 cut(s) 77, 373
TaaI ACNGT 1 cut(s) 34
TaiI ACGT 1 cut(s) 337
TaqI TCGA 1 cut(s) 144
TasI AATT 1 cut(s) 190
TauI GCSGC 2 cut(s) 169, 172
TfiI GAWTC 1 cut(s) 356
TscAI CASTG 1 cut(s) 353
TseFI GTSAC 1 cut(s) 301
Tsp45I GTSAC 1 cut(s) 301
TspDTI ATGAA 3 cut(s) 4, 253, 275
TspGWI ACGGA 1 cut(s) 84
TspRI CASTG 1 cut(s) 353
XapI RAATTY 1 cut(s) 190
XceI RCATGY 1 cut(s) 91
XspI CTAG 2 cut(s) 77, 373
Zsp2I ATGCAT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.