Rorug07G0174300

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
14313246 .. 14332588
19343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0174300.1

Sequence Viewer

Length: 2928 bp
ATGTTGGGTTTGTGCATTGTAGCATTAGTTGCTGTAGGCATTACACACTGGGTGTATAGGTGGAGAAATCCCAGATGCAATGGCAAACTTCCACCAGGTTCAATGGGTTTGCCACTGATAGGCGAGACCATACAGTTCCTCACTTCAAGCACCTCCTTCGATATTCCTCCCTTCATTAAGACAAGGATGGAAAGGTATGGACCAATATTCAAGAGCCAATTGATGGGAGCACCTTTCATAGTATCGACAGATCCCGAACTGAATATGTATGTCTTCCAACAAGACGATAAATTGTTTGAAAGCGGGTATCCAGATTCTGTCAAAAAGATTTTTGGTGAAAAACAGTTGGGAAACATTCATGTGTCGGTTTACAAATACCTCAAGAGCATGATGCTTAACCTCATTGGCCCTGAAAGCCTCAAAAATATGCTCCCTGAAATCGAGCAATCGACTCGCACAAGATTAGAGCAATGGTCGTGTCAAGACACTACAGAATTGAAAGAAGCAACTTCAGAAATGGTATTTGCACTCACTGCAAAGATACTCATAAGTTATGATTCAAGTAAGTCCTCAGACAACTTAAGGACAAGCTTCGATGCATTCGCTCGGGGAATGTTCTCCCTCCCATTGCCGATCCCCGGAACAGCTTTTCACAAATGTTTACAGGGTAGGAAAAGGGTAATGAGAACACTAAAATACATGCTACAGGAAAGGCGTGCAATGTCCCGAGAGCAACCTATCGATTTTTTTGATCACGTGCTTGAAGAACTTAAGAAAGAAGGAACAGTCTTAACGGAGGAAATTTCTTTTGACTTAATGTTTTTGCTACTCTTTGCGAGCTTTGATACAACTTCCACAGCTATGACCCTACTCGTCAAGTTTGTTTCAGACCATCCTCTGGTGCTAAAGCAATTGCTGCAAGAACATGAGATGATTGTAAAGCAAAGGGAGAATGCTAATTCAGGGCTTACATGGGAAGAATACAAGTCCATGACATTCACATTGCAGGTCATCAATGAAACGGTTAGACTGACAAATCATGTTCCAGGAATGTTTCGCAAGGCAATAAAAGAAGTACAATTCAAAGGATATACAATTCCAGAAGGCTGGTCAGTTATGGTTTGTCCCCAAGTCCAACACTTGAACCCAGAAAAATATGAAGATCCTATGGCCTTCAATCCATGGAGATGGGAGGGAAAGGAGAGTGGTGCATCGAAAGATTTCATGGCTTTTGGTGGTGGCTTGAGATCCTGCGTAGGAGCAGCGTTTGGCAAGGTGCAGATGGCTGTATTTCTTCATTGCTTCGTTACAAAGTACAGGTGGAGAAATCCCAGATGCAATGGCAAACTTCCACCTGGTTCAATGGGTTTGCCGCTGATAGGCGAGACCATACAGTACCTTGCTTCCAACTCCTCCTTTGATATTCCCCCTTTCATCAAGACCAGAAGGGAAAGGTATGGGCCAATATTCAAGAGTCAACTGATGGGAGCACCATTTATAGTATCGACAGACCCGGAACTCAATATGTATGTCTTCCAACAAGACGATAAATTGTTTCAAAGCGGGTATCCAGATTCTGTCCAAAAGATTTTCGGCAAACAACAGATGGGAAACATGCATGTGTTGGTTTACAAATATCTCAAGAGGATGATGCTTACCCTTATTGGCCCCGAAAGCCTTAAAAGGACGCTCCCTGAAATTGAACAAGCAATACACACAAGTATGCAACAATGGACATGTCAAGACACTACAGAAGTTAAAGGAGCAGCTGCAGACATGATATTCTCTCTCACTGCAAAGAAACTCATGAGTTATGATTCAAGTAACTCCTCAGACAACCTAAGGGCAAACTTCAATGCGTTCGCTGATGGACTGATCTCCTTGGCAATCCCTGGAACAGCTTTTCACAAATGTTTACAGGGTAGGGACAGGATATTGAGCAGGCTAAAAGACATGCTACAGGAAAGACGAGCAACATCTCGAAAGCAACCTATTGATTTTTTTGATTACATCCTTGAAGAACTTGAGAAAGAAGGAACAGTCTTAACAGAGGAAATTTGTTTTGATTTGATGTTTGCGCTACTCTTTACAAGTTTTGAAACAACTTCCACAGCAATGACTCTGCTCCTCAAGTTTGTTTCGGGCCATCCTCTGGTGCTAAAGCAATTAACGGAAGAACATGAAAGGATTATAAAGCAAAGGGAAAATGCTAATTCAGGACTTACATGGGAAGAATACAAATCAATGAAATTTACATTGCAGGTCATCAATGAAACGGTTAGACTGGCAAATCAAGTGCCAGGCATCTTTCGCAAGGCAATAAAAGAAGTACAGTTCAAGGGATATACAATCCCAGAAGGTTGGTCAGTTCTGGTTTGTTTCCAAGCCCAACACTTAAACCCAGAAAAATATGAAGATCCTCTGGCCTTCAACCCATGGAGATGGGAGGGTAAGGAGAGTGGTGCATCCAAAGATTTTATGGCTTTTGGTGGTGGCTTGAGATCCTGTGTAGGAGCAGAATTTGGTAAGCTGCAGATGGCTGTATTTGTCCATTGCTTAGTCACAAAATACAGCGCTGTGGACGAGGAGAGCACCAACCTCGTCACAGGGTTCTTCTCTAGCCTTTCGGAAAAGGACTTTTGCCTTACGGATAAGGACTTTGAGCAATCACTGGGAAGTTGGGAGAAAGCACGGGTTGCGCTAAAGCGTGACTTTAGCTTCGCTGGGTTGCGAGGGCGTTACCCTTGCTTCGCTGGCAGTAACGGTGGCGGTTGCGCTCGCAGTCGGCTCGCTGGGAGACTGGGATTGGAAGTACGGTCGCCGGGTTGGTCTGGTGATGCTGACAGTCGGCTCTTGGAGAGACTAGGACTGGCGCACGGTCACCGGGTTTCAACAAGGTTGAAGGTTTGCTCCGGGGAGGCTTTGTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

975

Amino Acids

110.6

Weight (kDa)

8.57

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 443 8.6e-56 Cytochrome P450
p450 PF00067 451 - 860 5.7e-54 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011715)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2192
Acc36I ACCTGC 2 cut(s) 997, 2251
AccB7I CCANNNNNTGG 3 cut(s) 223, 898, 2152
AciI CCGC 4 cut(s) 303, 1373, 1563, 2769
AclWI GGATC 6 cut(s) 245, 628, 1157, 1242, 2411, 2496
AcsI RAATTY 4 cut(s) 801, 2055, 2249, 2519
AcuI CTGAAG 1 cut(s) 495
AcvI CACGTG 1 cut(s) 757
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 5 cut(s) 1077, 1316, 1397, 2331, 2814
AfeI AGCGCT 1 cut(s) 2575
AfiI CCNNNNNNNGG 6 cut(s) 119, 223, 638, 898, 1379, 2152
AflII CTTAAG 2 cut(s) 580, 770
AflIII ACRYGT 1 cut(s) 1736
AjnI CCWGG 5 cut(s) 94, 1045, 1354, 1891, 2299
AluBI AGCT 8 cut(s) 591, 647, 840, 860, 1769, 1901, 2530, 2718
AluI AGCT 8 cut(s) 591, 647, 840, 860, 1769, 1901, 2530, 2718
Alw21I GWGCWC 3 cut(s) 232, 1492, 2594
Alw26I GTCTC 4 cut(s) 119, 1379, 2791, 2854
AlwI GGATC 6 cut(s) 245, 628, 1157, 1242, 2411, 2496
AlwNI CAGNNNCTG 2 cut(s) 317, 1577
Ama87I CYCGRG 2 cut(s) 606, 726
Aor51HI AGCGCT 1 cut(s) 2575
AoxI GGCC 6 cut(s) 406, 1170, 1460, 1666, 2143, 2424
ApeKI GCWGC 5 cut(s) 916, 1262, 1766, 1769, 2530
ApoI RAATTY 4 cut(s) 801, 2055, 2249, 2519
ArsI GACNNNNNNTTYG 2 cut(s) 2702, 2734
Asp700I GAANNNNTTC 1 cut(s) 1220
AspLEI GCGC 5 cut(s) 2080, 2576, 2701, 2777, 2875
AspS9I GGNCC 5 cut(s) 200, 407, 1460, 1667, 2143
AsuC2I CCSGG 5 cut(s) 639, 1514, 2823, 2885, 2914
AsuHPI GGTGA 3 cut(s) 347, 2846, 2873
AvaI CYCGRG 2 cut(s) 606, 726
AvaII GGWCC 1 cut(s) 200
AxyI CCTNAGG 1 cut(s) 1841
BbrPI CACGTG 1 cut(s) 757
BbsI GAAGAC 2 cut(s) 265, 1525
Bbv12I GWGCWC 3 cut(s) 232, 1492, 2594
BbvI GCAGC 5 cut(s) 903, 1274, 1756, 1778, 2517
BcgI CGANNNNNNTGC 8 cut(s) 139, 173, 434, 468, 2581, 2615, 2770, 2804
BciT130I CCWGG 5 cut(s) 96, 1047, 1356, 1893, 2301
BciVI GTATCC 2 cut(s) 318, 1578
BclI TGATCA 1 cut(s) 751
BcnI CCSGG 5 cut(s) 639, 1514, 2823, 2885, 2914
BcoDI GTCTC 4 cut(s) 119, 1379, 2791, 2854
BfaI CTAG 2 cut(s) 2619, 2864
BfmI CTRYAG 7 cut(s) 33, 489, 704, 1749, 1770, 1958, 2531
BfoI RGCGCY 1 cut(s) 2577
BfrI CTTAAG 2 cut(s) 580, 770
BfuAI ACCTGC 2 cut(s) 997, 2251
BfuI GTATCC 2 cut(s) 318, 1578
BisI GCNGC 6 cut(s) 917, 1263, 1373, 1767, 1770, 2531
BlsI GCNGC 6 cut(s) 918, 1264, 1374, 1768, 1771, 2532
Bme18I GGWCC 1 cut(s) 200
BmeT110I CYCGRG 2 cut(s) 606, 726
BmgT120I GGNCC 5 cut(s) 200, 407, 1460, 1667, 2143
BmiI GGNNCC 1 cut(s) 1669
BmrI ACTGGG 3 cut(s) 58, 2681, 2810
BmsI GCATC 9 cut(s) 65, 381, 586, 1220, 1325, 1641, 2313, 2474, 2827
BmuI ACTGGG 3 cut(s) 58, 2681, 2810
BpiI GAAGAC 2 cut(s) 265, 1525
BpuEI CTTGAG 6 cut(s) 365, 1264, 1625, 2045, 2114, 2518
BpuMI CCSGG 5 cut(s) 639, 1514, 2823, 2885, 2914
Bsa29I ATCGAT 1 cut(s) 741
BsaAI YACGTR 1 cut(s) 757
BsaI GGTCTC 2 cut(s) 119, 1379
BsaJI CCNNGG 6 cut(s) 637, 1181, 1881, 1891, 2435, 2913
BsaXI ACNNNNNCTCC 1 cut(s) 2909
Bsc4I CCNNNNNNNGG 6 cut(s) 119, 223, 638, 898, 1379, 2152
Bse1I ACTGG 5 cut(s) 53, 2289, 2676, 2805, 2874
Bse21I CCTNAGG 1 cut(s) 1841
BseBI CCWGG 5 cut(s) 96, 1047, 1356, 1893, 2301
BseCI ATCGAT 1 cut(s) 741
BseDI CCNNGG 6 cut(s) 637, 1181, 1881, 1891, 2435, 2913
BseGI GGATG 6 cut(s) 192, 892, 1653, 2010, 2146, 2465
BseLI CCNNNNNNNGG 6 cut(s) 119, 223, 638, 898, 1379, 2152
BseMII CTCAG 2 cut(s) 585, 1845
BseNI ACTGG 5 cut(s) 53, 2289, 2676, 2805, 2874
BseRI GAGGAG 4 cut(s) 1402, 1819, 2117, 2600
BseXI GCAGC 5 cut(s) 903, 1274, 1756, 1778, 2517
BseYI CCCAGC 2 cut(s) 2723, 2792
BsgI GTGCAG 1 cut(s) 1298
Bsh1285I CGRYCG 1 cut(s) 2819
BshFI GGCC 6 cut(s) 408, 1172, 1462, 1668, 2145, 2426
BshVI ATCGAT 1 cut(s) 741
BsiEI CGRYCG 1 cut(s) 2819
BsiHKAI GWGCWC 3 cut(s) 232, 1492, 2594
BsiHKCI CYCGRG 2 cut(s) 606, 726
BsiSI CCGG 5 cut(s) 639, 1514, 2822, 2884, 2913
BslFI GGGAC 3 cut(s) 709, 1110, 1940
BslI CCNNNNNNNGG 6 cut(s) 119, 223, 638, 898, 1379, 2152
BsmAI GTCTC 4 cut(s) 119, 1379, 2791, 2854
BsmFI GGGAC 3 cut(s) 709, 1110, 1940
BsmI GAATGC 2 cut(s) 599, 958
BsnI GGCC 6 cut(s) 408, 1172, 1462, 1668, 2145, 2426
Bso31I GGTCTC 2 cut(s) 119, 1379
BsoBI CYCGRG 2 cut(s) 606, 726
Bsp1286I GDGCHC 3 cut(s) 232, 1492, 2594
Bsp143I GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
Bsp19I CCATGG 2 cut(s) 1181, 2435
BspACI CCGC 4 cut(s) 303, 1373, 1563, 2769
BspANI GGCC 6 cut(s) 408, 1172, 1462, 1668, 2145, 2426
BspCNI CTCAG 2 cut(s) 584, 1844
BspDI ATCGAT 1 cut(s) 741
BspHI TCATGA 1 cut(s) 1806
BspLI GGNNCC 1 cut(s) 1669
BspMAI CTGCAG 2 cut(s) 1774, 2535
BspMI ACCTGC 2 cut(s) 997, 2251
BspPI GGATC 6 cut(s) 245, 628, 1157, 1242, 2411, 2496
BspTI CTTAAG 2 cut(s) 580, 770
BspTNI GGTCTC 2 cut(s) 119, 1379
BsrI ACTGG 5 cut(s) 53, 2289, 2676, 2805, 2874
BssECI CCNNGG 6 cut(s) 637, 1181, 1881, 1891, 2435, 2913
BssMI GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
BssT1I CCWWGG 3 cut(s) 1181, 1881, 2435
Bst2UI CCWGG 5 cut(s) 96, 1047, 1356, 1893, 2301
BstAFI CTTAAG 2 cut(s) 580, 770
BstAPI GCANNNNNTGC 4 cut(s) 29, 533, 916, 2696
BstBAI YACGTR 1 cut(s) 757
BstC8I GCNNGC 6 cut(s) 717, 838, 1943, 2755, 2779, 2790
BstDEI CTNAG 4 cut(s) 571, 1831, 1841, 2557
BstDSI CCRYGG 2 cut(s) 1181, 2435
BstEII GGTNACC 1 cut(s) 2879
BstF5I GGATG 6 cut(s) 192, 892, 1653, 2010, 2146, 2465
BstH2I RGCGCY 1 cut(s) 2577
BstHHI GCGC 5 cut(s) 2080, 2576, 2701, 2777, 2875
BstKTI GATC 8 cut(s) 253, 636, 754, 1165, 1250, 1878, 2419, 2504
BstMAI GTCTC 4 cut(s) 119, 1379, 2791, 2854
BstMBI GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
BstMCI CGRYCG 1 cut(s) 2819
BstMWI GCNNNNNNNGC 8 cut(s) 29, 414, 533, 916, 1674, 2310, 2696, 2754
BstNI CCWGG 5 cut(s) 96, 1047, 1356, 1893, 2301
BstNSI RCATGY 5 cut(s) 703, 1618, 1622, 1740, 1957
BstPI GGTNACC 1 cut(s) 2879
BstSFI CTRYAG 7 cut(s) 33, 489, 704, 1749, 1770, 1958, 2531
BstV1I GCAGC 5 cut(s) 903, 1274, 1756, 1778, 2517
BstV2I GAAGAC 2 cut(s) 265, 1525
BstX2I RGATCY 5 cut(s) 250, 1162, 1247, 2416, 2501
BstXI CCANNNNNNTGG 4 cut(s) 1107, 1188, 2361, 2442
BstYI RGATCY 5 cut(s) 250, 1162, 1247, 2416, 2501
Bsu15I ATCGAT 1 cut(s) 741
Bsu36I CCTNAGG 1 cut(s) 1841
BsuI GTATCC 2 cut(s) 318, 1578
BsuRI GGCC 6 cut(s) 408, 1172, 1462, 1668, 2145, 2426
BsuTUI ATCGAT 1 cut(s) 741
BtgI CCRYGG 2 cut(s) 1181, 2435
BtsCI GGATG 6 cut(s) 192, 892, 1653, 2010, 2146, 2465
BtsI GCAGTG 2 cut(s) 531, 1791
BtsIMutI CAGTG 5 cut(s) 46, 113, 531, 1791, 2669
BveI ACCTGC 2 cut(s) 997, 2251
Cac8I GCNNGC 6 cut(s) 717, 838, 1943, 2755, 2779, 2790
CaiI CAGNNNCTG 2 cut(s) 317, 1577
CciI TCATGA 1 cut(s) 1806
CfoI GCGC 5 cut(s) 2080, 2576, 2701, 2777, 2875
Cfr13I GGNCC 5 cut(s) 200, 407, 1460, 1667, 2143
ClaI ATCGAT 1 cut(s) 741
CseI GACGC 1 cut(s) 1696
CsiI ACCWGGT 2 cut(s) 94, 1354
Csp6I GTAC 5 cut(s) 1076, 1315, 1396, 2330, 2813
CviQI GTAC 5 cut(s) 1076, 1315, 1396, 2330, 2813
DdeI CTNAG 4 cut(s) 571, 1831, 1841, 2557
DpnI GATC 8 cut(s) 252, 635, 753, 1164, 1249, 1877, 2418, 2503
DpnII GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
DraIII CACNNNGTG 1 cut(s) 52
Eco130I CCWWGG 3 cut(s) 1181, 1881, 2435
Eco31I GGTCTC 2 cut(s) 119, 1379
Eco47I GGWCC 1 cut(s) 200
Eco47III AGCGCT 1 cut(s) 2575
Eco57I CTGAAG 1 cut(s) 495
Eco72I CACGTG 1 cut(s) 757
Eco81I CCTNAGG 1 cut(s) 1841
Eco88I CYCGRG 2 cut(s) 606, 726
Eco91I GGTNACC 1 cut(s) 2879
EcoO65I GGTNACC 1 cut(s) 2879
EcoRII CCWGG 5 cut(s) 94, 1045, 1354, 1891, 2299
EcoT14I CCWWGG 3 cut(s) 1181, 1881, 2435
EcoT22I ATGCAT 2 cut(s) 601, 1620
ErhI CCWWGG 3 cut(s) 1181, 1881, 2435
FalI AAGNNNNNCTT 2 cut(s) 2696, 2728
FaqI GGGAC 3 cut(s) 709, 1110, 1940
FauI CCCGC 2 cut(s) 296, 1556
FbaI TGATCA 1 cut(s) 751
Fnu4HI GCNGC 6 cut(s) 917, 1263, 1373, 1767, 1770, 2531
FokI GGATG 6 cut(s) 199, 879, 1660, 1997, 2133, 2452
Fsp4HI GCNGC 6 cut(s) 917, 1263, 1373, 1767, 1770, 2531
FspBI CTAG 2 cut(s) 2619, 2864
GlaI GCGC 5 cut(s) 2079, 2575, 2700, 2776, 2874
GluI GCNGC 6 cut(s) 917, 1263, 1373, 1767, 1770, 2531
GsaI CCCAGC 2 cut(s) 2727, 2796
HaeII RGCGCY 1 cut(s) 2577
HaeIII GGCC 6 cut(s) 408, 1172, 1462, 1668, 2145, 2426
HapII CCGG 5 cut(s) 639, 1514, 2822, 2884, 2913
HgaI GACGC 1 cut(s) 1696
HhaI GCGC 5 cut(s) 2080, 2576, 2701, 2777, 2875
Hin6I GCGC 5 cut(s) 2078, 2574, 2699, 2775, 2873
HinP1I GCGC 5 cut(s) 2078, 2574, 2699, 2775, 2873
HincII GTYRAC 1 cut(s) 1478
HindII GTYRAC 1 cut(s) 1478
HindIII AAGCTT 1 cut(s) 589
HinfI GANTC 7 cut(s) 314, 451, 557, 1474, 1574, 1817, 2119
HpaII CCGG 5 cut(s) 639, 1514, 2822, 2884, 2913
HphI GGTGA 3 cut(s) 347, 2846, 2873
Hpy166II GTNNAC 6 cut(s) 370, 662, 1478, 1630, 1916, 2581
Hpy188I TCNGA 5 cut(s) 514, 574, 889, 1834, 2629
Hpy8I GTNNAC 6 cut(s) 370, 662, 1478, 1630, 1916, 2581
HpyCH4IV ACGT 1 cut(s) 756
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 414, 533, 916, 1674, 2310, 2696, 2754
HpyF3I CTNAG 4 cut(s) 571, 1831, 1841, 2557
HpySE526I ACGT 1 cut(s) 756
HspAI GCGC 5 cut(s) 2078, 2574, 2699, 2775, 2873
Ksp22I TGATCA 1 cut(s) 751
Kzo9I GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
LmnI GCTCC 9 cut(s) 227, 435, 1259, 1487, 1695, 1763, 2130, 2513, 2915
Lsp1109I GCAGC 5 cut(s) 903, 1274, 1756, 1778, 2517
LweI GCATC 9 cut(s) 65, 381, 586, 1220, 1325, 1641, 2313, 2474, 2827
MabI ACCWGGT 2 cut(s) 94, 1354
MaeI CTAG 2 cut(s) 2619, 2864
MaeII ACGT 1 cut(s) 756
MaeIII GTNAC 8 cut(s) 1306, 1823, 2560, 2602, 2708, 2738, 2759, 2879
MalI GATC 8 cut(s) 252, 635, 753, 1164, 1249, 1877, 2418, 2503
MboI GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
MfeI CAATTG 2 cut(s) 218, 911
MflI RGATCY 5 cut(s) 250, 1162, 1247, 2416, 2501
MhlI GDGCHC 3 cut(s) 232, 1492, 2594
MlyI GAGTC 3 cut(s) 445, 1483, 2113
MmeI TCCRAC 4 cut(s) 301, 1159, 1431, 1561
Mph1103I ATGCAT 2 cut(s) 601, 1620
MroXI GAANNNNTTC 1 cut(s) 1220
MslI CAYNNNNRTG 7 cut(s) 359, 860, 1186, 1619, 1721, 2114, 2440
MspA1I CMGCKG 2 cut(s) 1375, 1769
MspCI CTTAAG 2 cut(s) 580, 770
MspI CCGG 5 cut(s) 639, 1514, 2822, 2884, 2913
MunI CAATTG 2 cut(s) 218, 911
Mva1269I GAATGC 2 cut(s) 599, 958
MvaI CCWGG 5 cut(s) 96, 1047, 1356, 1893, 2301
MwoI GCNNNNNNNGC 8 cut(s) 29, 414, 533, 916, 1674, 2310, 2696, 2754
NciI CCSGG 5 cut(s) 639, 1514, 2823, 2885, 2914
NcoI CCATGG 2 cut(s) 1181, 2435
NdeII GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
NlaIV GGNNCC 1 cut(s) 1669
NmuCI GTSAC 4 cut(s) 2560, 2602, 2708, 2879
NsiI ATGCAT 2 cut(s) 601, 1620
NspI RCATGY 5 cut(s) 703, 1618, 1622, 1740, 1957
PagI TCATGA 1 cut(s) 1806
PciI ACATGT 1 cut(s) 1736
PctI GAATGC 2 cut(s) 599, 958
PdmI GAANNNNTTC 1 cut(s) 1220
PfeI GAWTC 4 cut(s) 314, 557, 1574, 1817
PflMI CCANNNNNTGG 3 cut(s) 223, 898, 2152
PfoI TCCNGGA 1 cut(s) 1045
PkrI GCNGC 6 cut(s) 918, 1264, 1374, 1768, 1771, 2532
PleI GAGTC 3 cut(s) 445, 1482, 2113
PmaCI CACGTG 1 cut(s) 757
PmlI CACGTG 1 cut(s) 757
PpsI GAGTC 3 cut(s) 445, 1482, 2113
Ppu21I YACGTR 1 cut(s) 757
PscI ACATGT 1 cut(s) 1736
PsiI TTATAA 1 cut(s) 2192
Psp6I CCWGG 5 cut(s) 94, 1045, 1354, 1891, 2299
PspCI CACGTG 1 cut(s) 757
PspEI GGTNACC 1 cut(s) 2879
PspFI CCCAGC 2 cut(s) 2723, 2792
PspGI CCWGG 5 cut(s) 94, 1045, 1354, 1891, 2299
PspN4I GGNNCC 1 cut(s) 1669
PspPI GGNCC 5 cut(s) 200, 407, 1460, 1667, 2143
PsrI GAACNNNNNNTAC 2 cut(s) 1695, 1727
PstI CTGCAG 2 cut(s) 1774, 2535
PstNI CAGNNNCTG 2 cut(s) 317, 1577
PsuI RGATCY 5 cut(s) 250, 1162, 1247, 2416, 2501
PvuII CAGCTG 1 cut(s) 1769
RsaI GTAC 5 cut(s) 1077, 1316, 1397, 2331, 2814
RsaNI GTAC 5 cut(s) 1076, 1315, 1396, 2330, 2813
RseI CAYNNNNRTG 7 cut(s) 359, 860, 1186, 1619, 1721, 2114, 2440
SatI GCNGC 6 cut(s) 917, 1263, 1373, 1767, 1770, 2531
Sau3AI GATC 8 cut(s) 250, 633, 751, 1162, 1247, 1875, 2416, 2501
Sau96I GGNCC 5 cut(s) 200, 407, 1460, 1667, 2143
SchI GAGTC 3 cut(s) 445, 1483, 2113
SduI GDGCHC 3 cut(s) 232, 1492, 2594
SexAI ACCWGGT 2 cut(s) 94, 1354
SfaNI GCATC 9 cut(s) 65, 381, 586, 1220, 1325, 1641, 2313, 2474, 2827
SfcI CTRYAG 7 cut(s) 33, 489, 704, 1749, 1770, 1958, 2531
SinI GGWCC 1 cut(s) 200
SmiMI CAYNNNNRTG 7 cut(s) 359, 860, 1186, 1619, 1721, 2114, 2440
SmlI CTYRAG 8 cut(s) 380, 580, 770, 1243, 1640, 2024, 2129, 2497
SmoI CTYRAG 8 cut(s) 380, 580, 770, 1243, 1640, 2024, 2129, 2497
SsiI CCGC 4 cut(s) 303, 1373, 1563, 2769
SspI AATATT 2 cut(s) 207, 1467
SspMI CTAG 2 cut(s) 2619, 2864
StyI CCWWGG 3 cut(s) 1181, 1881, 2435
TaiI ACGT 1 cut(s) 759
TaqI TCGA 9 cut(s) 159, 245, 441, 449, 594, 741, 1214, 1505, 1981
TatI WGTACW 3 cut(s) 1075, 1314, 2329
TauI GCSGC 1 cut(s) 1375
TfiI GAWTC 4 cut(s) 314, 557, 1574, 1817
TscAI CASTG 5 cut(s) 53, 120, 538, 1798, 2676
TseFI GTSAC 4 cut(s) 2560, 2602, 2708, 2879
TseI GCWGC 5 cut(s) 916, 1262, 1766, 1769, 2530
Tsp45I GTSAC 4 cut(s) 2560, 2602, 2708, 2879
TspGWI ACGGA 3 cut(s) 809, 2186, 2663
TspRI CASTG 5 cut(s) 53, 120, 538, 1798, 2676
Van91I CCANNNNNTGG 3 cut(s) 223, 898, 2152
Vha464I CTTAAG 2 cut(s) 580, 770
VpaK11BI GGWCC 1 cut(s) 200
XapI RAATTY 4 cut(s) 801, 2055, 2249, 2519
XceI RCATGY 5 cut(s) 703, 1618, 1622, 1740, 1957
XcmI CCANNNNNNNNNTGG 1 cut(s) 2476
XmnI GAANNNNTTC 1 cut(s) 1220
XspI CTAG 2 cut(s) 2619, 2864
Zsp2I ATGCAT 2 cut(s) 601, 1620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.