Prupe.1G588000_v2.0.a1

Endoglucanase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
47771596 .. 47776497
4902 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G588000.1

Sequence Viewer

Length: 1518 bp
ATGGCAGAAGAACTCAACAGCTCTTTAGAGTATACATCAACATGGGTTGTTGCAGTTGTTTGCTTTGTCATTGTTCTACTATCTCTTTGTGCGGAGCGTGCTCTTCATAAACTCGGAAAGTACTTGAAGCATGAGAAACAAGACGCGCTATTTGAAGCACTACAGAAACTAAAAGAAGAATTGATGCTTTTAGGGTTCATTTCCCTTCTACTAACTGTATTTCAAGGTTCCATAAGCCACATATGCATCTCCTCTTATCTCGCATCTCACATGCTTCCATGCAAGCGGGAAACTTCTGAGGGAAACAACCATGAACATTACTCTCTTAATCCATCTCTAAACAATCGGCGGCGGCTTTTGTCTGCAGAAACAAATTCAGATCATTGTCTGAAGAAGGGGAAGGTTCCGTTGTTATCGTTGGAAGCACTACATCATCTACACATCTTCATCTTTGTATTGGCAGTTGTTCATGTGATCTTTTGTGTCACAACTATGGTTCTTGGAGGGGCAAGAATACGCCAATGGAAGCACTGGGAGGATTCTGTCAGGCAAGGTGCAGATCCAACTAGTCGTAAAAGAGTTCGTGCACATCATCATGAGTTCTTGAAAACACGTGGAGTTGGATATTGGAGAAAAGCGGCTGTAATAGGTTGGGTGACGTCATTCTTCAAACAATTTTACGGCTCTGTCACTAAGGCGGACTACATTGCACTGCGACAAGGGTTCATCAAGGAGCACTGCCCTGGGAATCCTAATTTTGATTTTCACACATACATGATGCGGACACTTGAAATTGACTTCAGAAAAATTGTTGGGATAAGCTGGTACCTATGGCTGTTTGTTGTGCTGTTTTTGTTGCTGAATGTGGAAGGATGGCATACGTATTTTTGGTTAGCGTTTTTGCCGCTGATTCTTCTGCTTCTTGTGGGCGCAAAGCTGGAGCACATAATTACCCGTTTGGCTCAGGAGGTGACAGAAGGGACAACACAGGTTGATCAAGAAGCAGCTGCAAGAGTGAAGCCTTCAGATAAACACTTTTGGTTTAACAACCCTCGCATTGTCCTGATTTTGATCCACTTCATATTGTTTCAGAATTCATTTGAGATTGCTTTCTTCTTCTGGATTTGGAGCACGTATGGAATTCATTCATGCATTATGGAGAAGTTGGGTTACATCATACCAAGACTTATTATGGGTGTGATTGTTCAAGTGCTTTGCAGTTACAGCACCCTACCGTTGTACGTTATCGTCACCCAGATGGGTACCATGTTCAAGGAAGGAATGTTTAATAAAATGGTACAAAAATATATTGGTATGTGGGCTGGAGATATAAGGAGTAAACATGGGAAAACAGACGGCGATGGATCTGTCTCAGAGAGGACAGAGATGCACAAAATGGTGAACATAGAATTATCTCAAATTGTTGATGTTACACAACAAGAAATAGTTGCCACCCAAGAAACGGTCCCTCATGTCCAACCGCCATTTTCATCGTCTCAAGCTCAACTTTCTTCATGA

Protein Analysis

506

Amino Acids

58.08

Weight (kDa)

8.8

Isoelectric Point (pI)

32.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011715)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 662
Acc65I GGTACC 2 cut(s) 825, 1262
AccB1I GGYRCC 2 cut(s) 825, 1262
AccI GTMKAC 1 cut(s) 32
AccII CGCG 1 cut(s) 146
AciI CCGC 9 cut(s) 92, 286, 349, 352, 638, 698, 781, 905, 1481
AclWI GGATC 3 cut(s) 554, 1066, 1372
AcsI RAATTY 3 cut(s) 373, 1093, 1140
AcuI CTGAAG 3 cut(s) 410, 784, 1008
AcvI CACGTG 1 cut(s) 614
AcyI GRCGYC 1 cut(s) 659
AfaI GTAC 5 cut(s) 122, 827, 1241, 1264, 1299
AfiI CCNNNNNNNGG 1 cut(s) 1462
AflIII ACRYGT 1 cut(s) 611
AgsI TTSAA 8 cut(s) 127, 155, 224, 607, 670, 791, 1208, 1273
AhlI ACTAGT 1 cut(s) 566
AjnI CCWGG 1 cut(s) 742
AluBI AGCT 5 cut(s) 21, 822, 937, 1007, 1502
AluI AGCT 5 cut(s) 21, 822, 937, 1007, 1502
Alw21I GWGCWC 5 cut(s) 103, 589, 738, 945, 1133
Alw26I GTCTC 2 cut(s) 1375, 1500
Alw44I GTGCAC 1 cut(s) 585
AlwI GGATC 3 cut(s) 554, 1066, 1372
ApaLI GTGCAC 1 cut(s) 585
ApeKI GCWGC 2 cut(s) 1004, 1007
ApoI RAATTY 3 cut(s) 373, 1093, 1140
ArsI GACNNNNNNTTYG 2 cut(s) 134, 166
Asp700I GAANNNNTTC 1 cut(s) 1144
Asp718I GGTACC 2 cut(s) 825, 1262
AspLEI GCGC 2 cut(s) 148, 932
AspS9I GGNCC 1 cut(s) 1465
AsuHPI GGTGA 4 cut(s) 667, 982, 1243, 1411
AvaII GGWCC 1 cut(s) 1465
BaeGI GKGCMC 1 cut(s) 589
BanI GGYRCC 2 cut(s) 825, 1262
BarI GAAGNNNNNNTAC 2 cut(s) 1154, 1186
BbrPI CACGTG 1 cut(s) 614
Bbv12I GWGCWC 5 cut(s) 103, 589, 738, 945, 1133
BbvI GCAGC 2 cut(s) 994, 1016
BccI CCATC 4 cut(s) 340, 867, 1252, 1355
BceAI ACGGC 2 cut(s) 697, 1372
BciT130I CCWGG 1 cut(s) 744
BclI TGATCA 1 cut(s) 994
BcoDI GTCTC 2 cut(s) 1375, 1500
BcuI ACTAGT 1 cut(s) 566
BfaI CTAG 1 cut(s) 567
BfmI CTRYAG 2 cut(s) 161, 363
BisI GCNGC 6 cut(s) 350, 353, 639, 905, 1005, 1008
BlsI GCNGC 6 cut(s) 351, 354, 640, 906, 1006, 1009
BmcAI AGTACT 1 cut(s) 122
Bme1390I CCNGG 1 cut(s) 744
Bme18I GGWCC 1 cut(s) 1465
BmgT120I GGNCC 1 cut(s) 1465
BmiI GGNNCC 5 cut(s) 229, 405, 827, 1264, 1467
BmrFI CCNGG 1 cut(s) 744
BmrI ACTGGG 1 cut(s) 541
BmsI GCATC 5 cut(s) 174, 255, 272, 768, 1377
BmuI ACTGGG 1 cut(s) 541
BpmI CTGGAG 2 cut(s) 959, 1344
Bpu10I CCTNAGC 1 cut(s) 963
BpuEI CTTGAG 1 cut(s) 1482
BsaAI YACGTR 3 cut(s) 614, 882, 1134
BsaBI GATNNNNATC 1 cut(s) 1070
BsaHI GRCGYC 1 cut(s) 659
BsaJI CCNNGG 2 cut(s) 742, 743
Bsc4I CCNNNNNNNGG 1 cut(s) 1462
Bse1I ACTGG 1 cut(s) 536
Bse3DI GCAATG 1 cut(s) 705
Bse8I GATNNNNATC 1 cut(s) 1070
BseBI CCWGG 1 cut(s) 744
BseDI CCNNGG 2 cut(s) 742, 743
BseGI GGATG 1 cut(s) 878
BseJI GATNNNNATC 1 cut(s) 1070
BseLI CCNNNNNNNGG 1 cut(s) 1462
BseMI GCAATG 1 cut(s) 705
BseMII CTCAG 3 cut(s) 288, 977, 1386
BseNI ACTGG 1 cut(s) 536
BseRI GAGGAG 1 cut(s) 241
BseSI GKGCMC 1 cut(s) 589
BseXI GCAGC 2 cut(s) 994, 1016
BsgI GTGCAG 1 cut(s) 576
Bsh1236I CGCG 1 cut(s) 146
BshNI GGYRCC 2 cut(s) 825, 1262
BsiHKAI GWGCWC 5 cut(s) 103, 589, 738, 945, 1133
BslFI GGGAC 2 cut(s) 994, 1451
BslI CCNNNNNNNGG 1 cut(s) 1462
BsmAI GTCTC 2 cut(s) 1375, 1500
BsmBI CGTCTC 1 cut(s) 1500
BsmFI GGGAC 2 cut(s) 994, 1451
Bsp1286I GDGCHC 5 cut(s) 103, 589, 738, 945, 1133
Bsp143I GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
BspACI CCGC 9 cut(s) 92, 286, 349, 352, 638, 698, 781, 905, 1481
BspCNI CTCAG 3 cut(s) 289, 976, 1385
BspFNI CGCG 1 cut(s) 146
BspHI TCATGA 2 cut(s) 595, 1514
BspLI GGNNCC 5 cut(s) 229, 405, 827, 1264, 1467
BspMAI CTGCAG 1 cut(s) 367
BspPI GGATC 3 cut(s) 554, 1066, 1372
BspQI GCTCTTC 1 cut(s) 108
BspT107I GGYRCC 2 cut(s) 825, 1262
BsrDI GCAATG 1 cut(s) 705
BsrI ACTGG 1 cut(s) 536
BssECI CCNNGG 2 cut(s) 742, 743
BssMI GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
BssNAI GTATAC 1 cut(s) 33
BssNI GRCGYC 1 cut(s) 659
Bst1107I GTATAC 1 cut(s) 33
Bst2UI CCWGG 1 cut(s) 744
Bst4CI ACNGT 3 cut(s) 217, 1236, 1465
Bst6I CTCTTC 1 cut(s) 108
BstACI GRCGYC 1 cut(s) 659
BstBAI YACGTR 3 cut(s) 614, 882, 1134
BstC8I GCNNGC 2 cut(s) 99, 284
BstDEI CTNAG 4 cut(s) 297, 693, 963, 1372
BstF5I GGATG 1 cut(s) 878
BstFNI CGCG 1 cut(s) 146
BstHHI GCGC 2 cut(s) 148, 932
BstKTI GATC 6 cut(s) 382, 477, 562, 997, 1074, 1367
BstMAI GTCTC 2 cut(s) 1375, 1500
BstMBI GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
BstMWI GCNNNNNNNGC 3 cut(s) 98, 243, 1224
BstNI CCWGG 1 cut(s) 744
BstNSI RCATGY 1 cut(s) 274
BstSCI CCNGG 1 cut(s) 742
BstSFI CTRYAG 2 cut(s) 161, 363
BstSLI GKGCMC 1 cut(s) 589
BstSNI TACGTA 1 cut(s) 882
BstUI CGCG 1 cut(s) 146
BstV1I GCAGC 2 cut(s) 994, 1016
BstX2I RGATCY 2 cut(s) 559, 1364
BstYI RGATCY 2 cut(s) 559, 1364
BstZ17I GTATAC 1 cut(s) 33
BtgZI GCGATG 1 cut(s) 1374
BtsCI GGATG 1 cut(s) 878
BtsI GCAGTG 2 cut(s) 710, 736
BtsIMutI CAGTG 3 cut(s) 529, 710, 736
Cac8I GCNNGC 2 cut(s) 99, 284
CciI TCATGA 2 cut(s) 595, 1514
CfoI GCGC 2 cut(s) 148, 932
Cfr13I GGNCC 1 cut(s) 1465
CseI GACGC 1 cut(s) 152
Csp6I GTAC 5 cut(s) 121, 826, 1240, 1263, 1298
CviQI GTAC 5 cut(s) 121, 826, 1240, 1263, 1298
DdeI CTNAG 4 cut(s) 297, 693, 963, 1372
DpnI GATC 6 cut(s) 381, 476, 561, 996, 1073, 1366
DpnII GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
Eam1104I CTCTTC 1 cut(s) 108
EarI CTCTTC 1 cut(s) 108
EciI GGCGGA 1 cut(s) 713
Eco105I TACGTA 1 cut(s) 882
Eco47I GGWCC 1 cut(s) 1465
Eco57I CTGAAG 3 cut(s) 410, 784, 1008
Eco72I CACGTG 1 cut(s) 614
EcoRI GAATTC 2 cut(s) 1093, 1140
EcoRII CCWGG 1 cut(s) 742
EcoT22I ATGCAT 2 cut(s) 248, 1154
Esp3I CGTCTC 1 cut(s) 1500
FalI AAGNNNNNCTT 1 cut(s) 1491
FaqI GGGAC 2 cut(s) 994, 1451
FauI CCCGC 1 cut(s) 279
FauNDI CATATG 1 cut(s) 242
FbaI TGATCA 1 cut(s) 994
FblI GTMKAC 1 cut(s) 32
Fnu4HI GCNGC 6 cut(s) 350, 353, 639, 905, 1005, 1008
FokI GGATG 1 cut(s) 885
Fsp4HI GCNGC 6 cut(s) 350, 353, 639, 905, 1005, 1008
FspBI CTAG 1 cut(s) 567
GlaI GCGC 2 cut(s) 147, 931
GluI GCNGC 6 cut(s) 350, 353, 639, 905, 1005, 1008
GsuI CTGGAG 2 cut(s) 959, 1344
HgaI GACGC 1 cut(s) 152
HhaI GCGC 2 cut(s) 148, 932
Hin1I GRCGYC 1 cut(s) 659
Hin6I GCGC 2 cut(s) 146, 930
HinP1I GCGC 2 cut(s) 146, 930
HinfI GANTC 3 cut(s) 539, 748, 910
HphI GGTGA 4 cut(s) 667, 982, 1243, 1411
Hpy166II GTNNAC 4 cut(s) 33, 587, 1340, 1402
Hpy188I TCNGA 8 cut(s) 116, 298, 379, 390, 803, 1027, 1092, 1375
Hpy188III TCNNGA 7 cut(s) 596, 604, 965, 998, 1063, 1120, 1515
Hpy8I GTNNAC 4 cut(s) 33, 587, 1340, 1402
HpyAV CCTTC 7 cut(s) 215, 388, 394, 863, 971, 1032, 1271
HpyCH4III ACNGT 3 cut(s) 217, 1236, 1465
HpyCH4IV ACGT 5 cut(s) 613, 659, 881, 1133, 1242
HpyF10VI GCNNNNNNNGC 3 cut(s) 98, 243, 1224
HpyF3I CTNAG 4 cut(s) 297, 693, 963, 1372
HpySE526I ACGT 5 cut(s) 613, 659, 881, 1133, 1242
Hsp92I GRCGYC 1 cut(s) 659
HspAI GCGC 2 cut(s) 146, 930
KpnI GGTACC 2 cut(s) 829, 1266
Ksp22I TGATCA 1 cut(s) 994
Kzo9I GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
LguI GCTCTTC 1 cut(s) 108
LmnI GCTCC 4 cut(s) 94, 733, 940, 1128
Lsp1109I GCAGC 2 cut(s) 994, 1016
LweI GCATC 5 cut(s) 174, 255, 272, 768, 1377
MaeI CTAG 1 cut(s) 567
MaeII ACGT 5 cut(s) 613, 659, 881, 1133, 1242
MaeIII GTNAC 8 cut(s) 484, 655, 688, 970, 1169, 1220, 1249, 1429
MalI GATC 6 cut(s) 381, 476, 561, 996, 1073, 1366
MboI GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
MflI RGATCY 2 cut(s) 559, 1364
MhlI GDGCHC 5 cut(s) 103, 589, 738, 945, 1133
MmeI TCCRAC 4 cut(s) 399, 587, 601, 1501
MnlI CCTC 8 cut(s) 262, 292, 497, 529, 961, 1062, 1371, 1479
Mph1103I ATGCAT 2 cut(s) 248, 1154
MroXI GAANNNNTTC 1 cut(s) 1144
MseI TTAA 3 cut(s) 327, 1044, 1287
MslI CAYNNNNRTG 5 cut(s) 40, 491, 594, 773, 1256
MspA1I CMGCKG 2 cut(s) 907, 1007
MspR9I CCNGG 1 cut(s) 744
MvaI CCWGG 1 cut(s) 744
MvnI CGCG 1 cut(s) 146
MwoI GCNNNNNNNGC 3 cut(s) 98, 243, 1224
NdeI CATATG 1 cut(s) 242
NdeII GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
NlaIV GGNNCC 5 cut(s) 229, 405, 827, 1264, 1467
NmuCI GTSAC 5 cut(s) 484, 655, 688, 970, 1249
NsiI ATGCAT 2 cut(s) 248, 1154
NspI RCATGY 1 cut(s) 274
PagI TCATGA 2 cut(s) 595, 1514
PasI CCCWGGG 1 cut(s) 743
PciSI GCTCTTC 1 cut(s) 108
PdmI GAANNNNTTC 1 cut(s) 1144
PfeI GAWTC 3 cut(s) 539, 748, 910
PkrI GCNGC 6 cut(s) 351, 354, 640, 906, 1006, 1009
PmaCI CACGTG 1 cut(s) 614
PmlI CACGTG 1 cut(s) 614
Ppu21I YACGTR 3 cut(s) 614, 882, 1134
Psp6I CCWGG 1 cut(s) 742
PspCI CACGTG 1 cut(s) 614
PspGI CCWGG 1 cut(s) 742
PspN4I GGNNCC 5 cut(s) 229, 405, 827, 1264, 1467
PspPI GGNCC 1 cut(s) 1465
PstI CTGCAG 1 cut(s) 367
PsuI RGATCY 2 cut(s) 559, 1364
PvuII CAGCTG 1 cut(s) 1007
RsaI GTAC 5 cut(s) 122, 827, 1241, 1264, 1299
RsaNI GTAC 5 cut(s) 121, 826, 1240, 1263, 1298
RseI CAYNNNNRTG 5 cut(s) 40, 491, 594, 773, 1256
SapI GCTCTTC 1 cut(s) 108
SaqAI TTAA 3 cut(s) 327, 1044, 1287
SatI GCNGC 6 cut(s) 350, 353, 639, 905, 1005, 1008
Sau3AI GATC 6 cut(s) 379, 474, 559, 994, 1071, 1364
Sau96I GGNCC 1 cut(s) 1465
ScaI AGTACT 1 cut(s) 122
ScrFI CCNGG 1 cut(s) 744
SduI GDGCHC 5 cut(s) 103, 589, 738, 945, 1133
SfaNI GCATC 5 cut(s) 174, 255, 272, 768, 1377
SfcI CTRYAG 2 cut(s) 161, 363
SinI GGWCC 1 cut(s) 1465
SmiMI CAYNNNNRTG 5 cut(s) 40, 491, 594, 773, 1256
SmlI CTYRAG 1 cut(s) 1497
SmoI CTYRAG 1 cut(s) 1497
SnaBI TACGTA 1 cut(s) 882
SpeI ACTAGT 1 cut(s) 566
SsiI CCGC 9 cut(s) 92, 286, 349, 352, 638, 698, 781, 905, 1481
SspMI CTAG 1 cut(s) 567
StyD4I CCNGG 1 cut(s) 742
TaaI ACNGT 3 cut(s) 217, 1236, 1465
TaiI ACGT 5 cut(s) 616, 662, 884, 1136, 1245
TatI WGTACW 1 cut(s) 120
TauI GCSGC 4 cut(s) 352, 355, 641, 907
TfiI GAWTC 3 cut(s) 539, 748, 910
Tru1I TTAA 3 cut(s) 327, 1044, 1287
Tru9I TTAA 3 cut(s) 327, 1044, 1287
TscAI CASTG 3 cut(s) 536, 717, 743
TseFI GTSAC 5 cut(s) 484, 655, 688, 970, 1249
TseI GCWGC 2 cut(s) 1004, 1007
Tsp45I GTSAC 5 cut(s) 484, 655, 688, 970, 1249
TspGWI ACGGA 1 cut(s) 396
TspRI CASTG 3 cut(s) 536, 717, 743
VneI GTGCAC 1 cut(s) 585
VpaK11BI GGWCC 1 cut(s) 1465
XapI RAATTY 3 cut(s) 373, 1093, 1140
XceI RCATGY 1 cut(s) 274
XmiI GTMKAC 1 cut(s) 32
XmnI GAANNNNTTC 1 cut(s) 1144
XspI CTAG 1 cut(s) 567
ZraI GACGTC 1 cut(s) 660
ZrmI AGTACT 1 cut(s) 122
Zsp2I ATGCAT 2 cut(s) 248, 1154
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.