MD09G1085900.v1.1

Regulator of chromosome condensation (RCC1) repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0008433
Physical Location & Seq
Reverse (-)
6114539 .. 6120320
5782 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1085900.v1.1.491

Sequence Viewer

Length: 1533 bp
ATGAGTGTTATACATTTCTTATTTAAGGGTTGTTTAACCATTCGTGCTTTTGATGAGGCTATTTCTGAGCTTGACACATTGGGTGAGGAATCCTACAAGGATAGCACTTTGATCATGCAGCTCCTCCGAGACAATCTGACACTCTGGACTTCTGATATCACGAAGGATTTGCCTATGAACTTGACGGTCTTGAGCGCGTCAGCGCTTAGGGTTGAAATGTTCCAGCCTAGGGTTGGAATGTTCCAACAGATCGCAAAATTGCGTTTTATAATTGGTGAGAGAAGAATTTGGTTCAGTGCTTTGAGTGCTGTGCTATATGATTTAGTGGGCTCTGGGGAAGACGGCCAATTGGGAATCGGGAACAACGAGGAGAAGGAATGGGTGTGCGCCGTCAGAGCCCTCGAGTCGCAGACTATCCGCTCTGTTGTCGCTGGCAGCCGAAATTCTCTCGCTATTTGCGATGACGGCAAGTTGTTTACATGGGGTTGGAACCAAAGAGGAACCTTAGGGCACCCTTCCGAGACCAAAACTGAGAACATTCCAAGCCAGGTTAAAGCTCTTGCCAATGTCAAGATTGTTCAGGCTGCTATTGGTGGATGGCATTGTTTGGCTGTCGATGATCAAGGTCGTGCTTACGCTTGGGGTGGGAATGAGTATGGACAGTGTGGTGAAGAACCTGAGCGGAAAGATGACACTGTTAGACCTTTGAGAAGGGATATAGTGAATCCTCAACGCTGTGCACCAACACTTAAGGTCCGCCAGGTAGCTGCTGGGGGTACTCACTCTGTGGTACTTACACGTGATGGGCAAGTATGGACATGGGGTCAGCCATGGCCTCCGGGAGACATAAAACAAATTTCAACACCTGTGCGTGTACAAGGTCTTGATGCAGTGAGGCTCATTGCAGTTGGGGCATTTCATAATTTGGCTCTGCAGGAGGATGGTACTTTATGGGCTTGGGGTAATAACGAATATGGACAACTTGGAACAGGGGATACTCAGCCGAGATCGCAGCCTATTCCTGTCCAGGGGCTATCTGGTCTTAATTTGGTGGATATTGCTGCTGGAGGATGGCATTCTACTGCACTAACAGAAGATGGAGAGGTGATTTCTCTCCCTTCCTCCCTTCTAACATACACCAATGACCGTTTGAGATCAACCTGCTATAGTTCAAATATTTCGGAGAACATGGAAGGCTTGGGTTTTGGTGACAATGATAAAAGTAGTAAAATGGTGCCGCAAAGGGTTCATCTTTTAGCTGGGGAGGATATTGTTCAGGTGTCTTGTGGAGGCACTCACTCTGTTGCATTAACTCGTGACGGGCGAATCTATTCGTTTGGCCGAGGCGACCACGGACGCCTTGGATATGGAAGGAAGGTGACGACTGGTCAGCCGATGGAAGTTCCCATTGGCATCCCTCCCAGAAATGGCACTGCAGACAATGGACACTGGATTGCCAAACTCGTCGCTTCTGGAGGACGCCATACGTTGGCAATCGTAGAATGGAAAGCCGATGATGAACCAGAATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RCC1

Protein Analysis

511

Amino Acids

55.68

Weight (kDa)

5.64

Isoelectric Point (pI)

32.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
14-3-3 PF00244 15 - 50 1.3e-12 14-3-3 protein
WD40_RLD PF25390 109 - 371 1.4e-63 RCC1-like domain
Alsin_RLD PF25384 109 - 212 5.3e-08 Alsin RCC1-like domain
RCC1_2 PF13540 139 - 167 6.6e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 155 - 205 2.4e-15 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 192 - 221 2.9e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 208 - 265 5.5e-09 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 252 - 276 1.8e-08 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 298 - 327 5.7e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 314 - 363 4.5e-16 Regulator of chromosome condensation (RCC1) repeat
WD40_RLD PF25390 397 - 499 4.5e-17 RCC1-like domain
RCC1 PF00415 400 - 437 6.2e-07 Regulator of chromosome condensation (RCC1) repeat
RCC1_2 PF13540 424 - 452 3.9e-10 Regulator of chromosome condensation (RCC1) repeat
RCC1 PF00415 440 - 499 2.7e-08 Regulator of chromosome condensation (RCC1) repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 269
Acc36I ACCTGC 1 cut(s) 1169
AccB1I GGYRCC 2 cut(s) 510, 1234
AccB7I CCANNNNNTGG 1 cut(s) 1489
AccBSI CCGCTC 2 cut(s) 420, 682
AccII CGCG 1 cut(s) 197
AciI CCGC 4 cut(s) 418, 682, 757, 1238
AcoI YGGCCR 2 cut(s) 343, 1339
AcsI RAATTY 3 cut(s) 285, 442, 855
AcvI CACGTG 1 cut(s) 800
AcyI GRCGYC 2 cut(s) 1357, 1480
AdeI CACNNNGTG 1 cut(s) 787
AfaI GTAC 4 cut(s) 778, 792, 876, 946
AfeI AGCGCT 1 cut(s) 204
AfiI CCNNNNNNNGG 5 cut(s) 229, 233, 1028, 1427, 1489
AflII CTTAAG 1 cut(s) 749
AflIII ACRYGT 1 cut(s) 797
AgsI TTSAA 3 cut(s) 215, 861, 1173
AhdI GACNNNNNGTC 2 cut(s) 822, 1386
AjnI CCWGG 3 cut(s) 546, 759, 1026
AjuI GAANNNNNNNTTGG 2 cut(s) 1392, 1424
AluBI AGCT 5 cut(s) 70, 121, 557, 767, 1259
AluI AGCT 5 cut(s) 70, 121, 557, 767, 1259
Alw21I GWGCWC 1 cut(s) 742
Alw26I GTCTC 3 cut(s) 123, 515, 837
Alw44I GTGCAC 1 cut(s) 738
Ama87I CYCGRG 1 cut(s) 401
Aor51HI AGCGCT 1 cut(s) 204
AoxI GGCC 3 cut(s) 343, 833, 1339
ApaLI GTGCAC 1 cut(s) 738
ApeKI GCWGC 6 cut(s) 118, 435, 584, 767, 1012, 1061
ApoI RAATTY 3 cut(s) 285, 442, 855
Asp700I GAANNNNTTC 1 cut(s) 1330
AspA2I CCTAGG 1 cut(s) 227
AspLEI GCGC 3 cut(s) 197, 205, 389
AspS9I GGNCC 1 cut(s) 754
AsuC2I CCSGG 1 cut(s) 840
AsuHPI GGTGA 6 cut(s) 95, 287, 680, 1117, 1220, 1390
AvaI CYCGRG 1 cut(s) 401
AvaII GGWCC 1 cut(s) 754
AvrII CCTAGG 1 cut(s) 227
AxyI CCTNAGG 1 cut(s) 505
BaeGI GKGCMC 2 cut(s) 513, 742
BanI GGYRCC 2 cut(s) 510, 1234
BanII GRGCYC 2 cut(s) 332, 400
BauI CACGAG 1 cut(s) 1314
BbrPI CACGTG 1 cut(s) 800
BbsI GAAGAC 1 cut(s) 345
Bbv12I GWGCWC 1 cut(s) 742
BbvI GCAGC 6 cut(s) 130, 447, 571, 754, 1024, 1048
BccI CCATC 6 cut(s) 591, 797, 935, 1065, 1091, 1390
BceAI ACGGC 3 cut(s) 358, 374, 481
BcgI CGANNNNNNTGC 2 cut(s) 151, 185
BciT130I CCWGG 3 cut(s) 548, 761, 1028
BciVI GTATCC 1 cut(s) 988
BclI TGATCA 2 cut(s) 111, 619
BcnI CCSGG 1 cut(s) 840
BcoDI GTCTC 3 cut(s) 123, 515, 837
BfaI CTAG 1 cut(s) 228
BfmI CTRYAG 3 cut(s) 932, 1165, 1434
BfoI RGCGCY 1 cut(s) 206
BfrI CTTAAG 1 cut(s) 749
BfuAI ACCTGC 1 cut(s) 1169
BfuI GTATCC 1 cut(s) 988
BisI GCNGC 7 cut(s) 119, 436, 585, 768, 1013, 1062, 1238
BlnI CCTAGG 1 cut(s) 227
BlsI GCNGC 7 cut(s) 120, 437, 586, 769, 1014, 1063, 1239
Bme1390I CCNGG 4 cut(s) 548, 761, 840, 1028
Bme18I GGWCC 1 cut(s) 754
BmeRI GACNNNNNGTC 2 cut(s) 822, 1386
BmeT110I CYCGRG 1 cut(s) 401
BmgT120I GGNCC 1 cut(s) 754
BmiI GGNNCC 4 cut(s) 491, 502, 512, 1236
BmrFI CCNGG 4 cut(s) 548, 761, 840, 1028
BmsI GCATC 2 cut(s) 877, 1422
BpiI GAAGAC 1 cut(s) 345
BpmI CTGGAG 2 cut(s) 1086, 1494
Bpu10I CCTNAGC 2 cut(s) 206, 678
BpuEI CTTGAG 1 cut(s) 211
BpuMI CCSGG 1 cut(s) 840
BsaAI YACGTR 1 cut(s) 800
BsaHI GRCGYC 2 cut(s) 1357, 1480
BsaI GGTCTC 1 cut(s) 515
BsaJI CCNNGG 6 cut(s) 227, 830, 1027, 1342, 1351, 1360
Bsc4I CCNNNNNNNGG 5 cut(s) 229, 233, 1028, 1427, 1489
Bse1I ACTGG 2 cut(s) 1390, 1454
Bse21I CCTNAGG 1 cut(s) 505
Bse3DI GCAATG 1 cut(s) 900
BseBI CCWGG 3 cut(s) 548, 761, 1028
BseDI CCNNGG 6 cut(s) 227, 830, 1027, 1342, 1351, 1360
BseGI GGATG 4 cut(s) 602, 946, 1076, 1413
BseLI CCNNNNNNNGG 5 cut(s) 229, 233, 1028, 1427, 1489
BseMI GCAATG 1 cut(s) 900
BseMII CTCAG 4 cut(s) 57, 522, 669, 1013
BseNI ACTGG 2 cut(s) 1390, 1454
BseRI GAGGAG 2 cut(s) 113, 383
BseSI GKGCMC 2 cut(s) 513, 742
BseXI GCAGC 6 cut(s) 130, 447, 571, 754, 1024, 1048
BseYI CCCAGC 2 cut(s) 770, 1259
BsgI GTGCAG 1 cut(s) 1068
Bsh1236I CGCG 1 cut(s) 197
BshFI GGCC 3 cut(s) 345, 835, 1341
BshNI GGYRCC 2 cut(s) 510, 1234
BsiHKAI GWGCWC 1 cut(s) 742
BsiHKCI CYCGRG 1 cut(s) 401
BsiSI CCGG 1 cut(s) 839
BslI CCNNNNNNNGG 5 cut(s) 229, 233, 1028, 1427, 1489
BsmAI GTCTC 3 cut(s) 123, 515, 837
BsmI GAATGC 1 cut(s) 1075
BsnI GGCC 3 cut(s) 345, 835, 1341
Bso31I GGTCTC 1 cut(s) 515
BsoBI CYCGRG 1 cut(s) 401
Bsp1286I GDGCHC 4 cut(s) 332, 400, 513, 742
Bsp1407I TGTACA 1 cut(s) 874
Bsp143I GATC 5 cut(s) 111, 249, 619, 1007, 1154
Bsp19I CCATGG 1 cut(s) 830
BspACI CCGC 4 cut(s) 418, 682, 757, 1238
BspANI GGCC 3 cut(s) 345, 835, 1341
BspCNI CTCAG 4 cut(s) 58, 523, 670, 1012
BspFNI CGCG 1 cut(s) 197
BspLI GGNNCC 4 cut(s) 491, 502, 512, 1236
BspMAI CTGCAG 2 cut(s) 936, 1438
BspMI ACCTGC 1 cut(s) 1169
BspT107I GGYRCC 2 cut(s) 510, 1234
BspTI CTTAAG 1 cut(s) 749
BspTNI GGTCTC 1 cut(s) 515
BsrBI CCGCTC 2 cut(s) 420, 682
BsrDI GCAATG 1 cut(s) 900
BsrGI TGTACA 1 cut(s) 874
BsrI ACTGG 2 cut(s) 1390, 1454
BssECI CCNNGG 6 cut(s) 227, 830, 1027, 1342, 1351, 1360
BssMI GATC 5 cut(s) 111, 249, 619, 1007, 1154
BssNI GRCGYC 2 cut(s) 1357, 1480
BssSI CACGAG 1 cut(s) 1314
BssT1I CCWWGG 3 cut(s) 227, 830, 1360
Bst2BI CACGAG 1 cut(s) 1314
Bst2UI CCWGG 3 cut(s) 548, 761, 1028
Bst4CI ACNGT 4 cut(s) 187, 663, 697, 1148
BstACI GRCGYC 2 cut(s) 1357, 1480
BstAFI CTTAAG 1 cut(s) 749
BstAUI TGTACA 1 cut(s) 874
BstBAI YACGTR 1 cut(s) 800
BstC8I GCNNGC 1 cut(s) 433
BstDEI CTNAG 6 cut(s) 66, 206, 505, 531, 678, 999
BstDSI CCRYGG 2 cut(s) 830, 1351
BstF5I GGATG 4 cut(s) 602, 946, 1076, 1413
BstFNI CGCG 1 cut(s) 197
BstH2I RGCGCY 1 cut(s) 206
BstHHI GCGC 3 cut(s) 197, 205, 389
BstKTI GATC 5 cut(s) 114, 252, 622, 1010, 1157
BstMAI GTCTC 3 cut(s) 123, 515, 837
BstMBI GATC 5 cut(s) 111, 249, 619, 1007, 1154
BstMWI GCNNNNNNNGC 5 cut(s) 305, 395, 465, 911, 1009
BstNI CCWGG 3 cut(s) 548, 761, 1028
BstSCI CCNGG 4 cut(s) 546, 759, 838, 1026
BstSFI CTRYAG 3 cut(s) 932, 1165, 1434
BstSLI GKGCMC 2 cut(s) 513, 742
BstUI CGCG 1 cut(s) 197
BstV1I GCAGC 6 cut(s) 130, 447, 571, 754, 1024, 1048
BstV2I GAAGAC 1 cut(s) 345
Bsu36I CCTNAGG 1 cut(s) 505
BsuI GTATCC 1 cut(s) 988
BsuRI GGCC 3 cut(s) 345, 835, 1341
BtgI CCRYGG 2 cut(s) 830, 1351
BtgZI GCGATG 1 cut(s) 474
BtsCI GGATG 4 cut(s) 602, 946, 1076, 1413
BtsI GCAGTG 2 cut(s) 897, 1431
BtsIMutI CAGTG 6 cut(s) 301, 668, 693, 897, 1431, 1447
BveI ACCTGC 1 cut(s) 1169
Cac8I GCNNGC 1 cut(s) 433
CfoI GCGC 3 cut(s) 197, 205, 389
Cfr13I GGNCC 1 cut(s) 754
CseI GACGC 3 cut(s) 186, 1365, 1488
Csp6I GTAC 4 cut(s) 777, 791, 875, 945
CviAII CATG 5 cut(s) 115, 480, 819, 831, 1189
CviQI GTAC 4 cut(s) 777, 791, 875, 945
DdeI CTNAG 6 cut(s) 66, 206, 505, 531, 678, 999
DpnI GATC 5 cut(s) 113, 251, 621, 1009, 1156
DpnII GATC 5 cut(s) 111, 249, 619, 1007, 1154
DraIII CACNNNGTG 1 cut(s) 787
DriI GACNNNNNGTC 2 cut(s) 822, 1386
EaeI YGGCCR 2 cut(s) 343, 1339
Eam1105I GACNNNNNGTC 2 cut(s) 822, 1386
EciI GGCGGA 1 cut(s) 746
Eco130I CCWWGG 3 cut(s) 227, 830, 1360
Eco24I GRGCYC 2 cut(s) 332, 400
Eco31I GGTCTC 1 cut(s) 515
Eco32I GATATC 1 cut(s) 157
Eco47I GGWCC 1 cut(s) 754
Eco47III AGCGCT 1 cut(s) 204
Eco72I CACGTG 1 cut(s) 800
Eco81I CCTNAGG 1 cut(s) 505
Eco88I CYCGRG 1 cut(s) 401
EcoRII CCWGG 3 cut(s) 546, 759, 1026
EcoRV GATATC 1 cut(s) 157
EcoT14I CCWWGG 3 cut(s) 227, 830, 1360
EcoT38I GRGCYC 2 cut(s) 332, 400
ErhI CCWWGG 3 cut(s) 227, 830, 1360
FaeI CATG 5 cut(s) 118, 483, 822, 834, 1192
FatI CATG 5 cut(s) 114, 479, 818, 830, 1188
FbaI TGATCA 2 cut(s) 111, 619
Fnu4HI GCNGC 7 cut(s) 119, 436, 585, 768, 1013, 1062, 1238
FokI GGATG 4 cut(s) 609, 953, 1083, 1400
FriOI GRGCYC 2 cut(s) 332, 400
Fsp4HI GCNGC 7 cut(s) 119, 436, 585, 768, 1013, 1062, 1238
FspBI CTAG 1 cut(s) 228
GlaI GCGC 3 cut(s) 196, 204, 388
GluI GCNGC 7 cut(s) 119, 436, 585, 768, 1013, 1062, 1238
GsaI CCCAGC 2 cut(s) 774, 1263
GsuI CTGGAG 2 cut(s) 1086, 1494
HaeII RGCGCY 1 cut(s) 206
HaeIII GGCC 3 cut(s) 345, 835, 1341
HapII CCGG 1 cut(s) 839
HgaI GACGC 3 cut(s) 186, 1365, 1488
HhaI GCGC 3 cut(s) 197, 205, 389
Hin1I GRCGYC 2 cut(s) 1357, 1480
Hin1II CATG 5 cut(s) 118, 483, 822, 834, 1192
Hin6I GCGC 3 cut(s) 195, 203, 387
HinP1I GCGC 3 cut(s) 195, 203, 387
HinfI GANTC 6 cut(s) 89, 354, 404, 724, 1326, 1526
HpaII CCGG 1 cut(s) 839
HphI GGTGA 6 cut(s) 95, 287, 680, 1117, 1220, 1390
Hpy166II GTNNAC 3 cut(s) 477, 740, 875
Hpy188I TCNGA 7 cut(s) 67, 128, 138, 154, 395, 520, 1183
Hpy188III TCNNGA 8 cut(s) 145, 160, 190, 358, 571, 884, 1316, 1473
Hpy8I GTNNAC 3 cut(s) 477, 740, 875
Hpy99I CGWCG 1 cut(s) 1469
HpyAV CCTTC 9 cut(s) 157, 367, 525, 705, 1128, 1136, 1187, 1365, 1369
HpyCH4III ACNGT 4 cut(s) 187, 663, 697, 1148
HpyCH4IV ACGT 2 cut(s) 799, 1487
HpyCH4V TGCA 8 cut(s) 118, 740, 890, 905, 934, 1085, 1307, 1436
HpyF10VI GCNNNNNNNGC 5 cut(s) 305, 395, 465, 911, 1009
HpyF3I CTNAG 6 cut(s) 66, 206, 505, 531, 678, 999
HpySE526I ACGT 2 cut(s) 799, 1487
Hsp92I GRCGYC 2 cut(s) 1357, 1480
Hsp92II CATG 5 cut(s) 118, 483, 822, 834, 1192
HspAI GCGC 3 cut(s) 195, 203, 387
Ksp22I TGATCA 2 cut(s) 111, 619
Kzo9I GATC 5 cut(s) 111, 249, 619, 1007, 1154
LmnI GCTCC 1 cut(s) 126
Lsp1109I GCAGC 6 cut(s) 130, 447, 571, 754, 1024, 1048
LweI GCATC 2 cut(s) 877, 1422
MaeI CTAG 1 cut(s) 228
MaeII ACGT 2 cut(s) 799, 1487
MaeIII GTNAC 3 cut(s) 1208, 1316, 1378
MalI GATC 5 cut(s) 113, 251, 621, 1009, 1156
MbiI CCGCTC 2 cut(s) 420, 682
MboI GATC 5 cut(s) 111, 249, 619, 1007, 1154
MboII GAAGA 4 cut(s) 294, 350, 683, 1106
MfeI CAATTG 1 cut(s) 347
MhlI GDGCHC 4 cut(s) 332, 400, 513, 742
MluCI AATT 8 cut(s) 257, 270, 285, 347, 442, 855, 922, 1045
MlyI GAGTC 1 cut(s) 413
MmeI TCCRAC 3 cut(s) 214, 268, 467
MroXI GAANNNNTTC 1 cut(s) 1330
MseI TTAA 6 cut(s) 24, 35, 552, 750, 1044, 1310
MspCI CTTAAG 1 cut(s) 749
MspI CCGG 1 cut(s) 839
MspR9I CCNGG 4 cut(s) 548, 761, 840, 1028
MunI CAATTG 1 cut(s) 347
Mva1269I GAATGC 1 cut(s) 1075
MvaI CCWGG 3 cut(s) 548, 761, 1028
MvnI CGCG 1 cut(s) 197
MwoI GCNNNNNNNGC 5 cut(s) 305, 395, 465, 911, 1009
NciI CCSGG 1 cut(s) 840
NcoI CCATGG 1 cut(s) 830
NdeII GATC 5 cut(s) 111, 249, 619, 1007, 1154
NlaIII CATG 5 cut(s) 118, 483, 822, 834, 1192
NlaIV GGNNCC 4 cut(s) 491, 502, 512, 1236
NmeAIII GCCGAG 2 cut(s) 1029, 1367
NmuCI GTSAC 3 cut(s) 1208, 1316, 1378
PaeR7I CTCGAG 1 cut(s) 401
PcsI WCGNNNNNNNCGW 3 cut(s) 363, 456, 1321
PctI GAATGC 1 cut(s) 1075
PdmI GAANNNNTTC 1 cut(s) 1330
PfeI GAWTC 5 cut(s) 89, 354, 724, 1326, 1526
PflMI CCANNNNNTGG 1 cut(s) 1489
PfoI TCCNGGA 1 cut(s) 838
PkrI GCNGC 7 cut(s) 120, 437, 586, 769, 1014, 1063, 1239
PleI GAGTC 1 cut(s) 412
PmaCI CACGTG 1 cut(s) 800
PmlI CACGTG 1 cut(s) 800
PpsI GAGTC 1 cut(s) 412
Ppu21I YACGTR 1 cut(s) 800
PsiI TTATAA 1 cut(s) 269
Psp6I CCWGG 3 cut(s) 546, 759, 1026
PspCI CACGTG 1 cut(s) 800
PspFI CCCAGC 2 cut(s) 770, 1259
PspGI CCWGG 3 cut(s) 546, 759, 1026
PspN4I GGNNCC 4 cut(s) 491, 502, 512, 1236
PspPI GGNCC 1 cut(s) 754
PspXI VCTCGAGB 1 cut(s) 401
PsrI GAACNNNNNNTAC 2 cut(s) 979, 1011
PstI CTGCAG 2 cut(s) 936, 1438
RsaI GTAC 4 cut(s) 778, 792, 876, 946
RsaNI GTAC 4 cut(s) 777, 791, 875, 945
SaqAI TTAA 6 cut(s) 24, 35, 552, 750, 1044, 1310
SatI GCNGC 7 cut(s) 119, 436, 585, 768, 1013, 1062, 1238
Sau3AI GATC 5 cut(s) 111, 249, 619, 1007, 1154
Sau96I GGNCC 1 cut(s) 754
SchI GAGTC 1 cut(s) 413
ScrFI CCNGG 4 cut(s) 548, 761, 840, 1028
SduI GDGCHC 4 cut(s) 332, 400, 513, 742
SfaNI GCATC 2 cut(s) 877, 1422
SfcI CTRYAG 3 cut(s) 932, 1165, 1434
Sfr274I CTCGAG 1 cut(s) 401
SinI GGWCC 1 cut(s) 754
SlaI CTCGAG 1 cut(s) 401
SmlI CTYRAG 3 cut(s) 190, 401, 749
SmoI CTYRAG 3 cut(s) 190, 401, 749
Sse9I AATT 8 cut(s) 257, 270, 285, 347, 442, 855, 922, 1045
SsiI CCGC 4 cut(s) 418, 682, 757, 1238
SspI AATATT 1 cut(s) 1177
SspMI CTAG 1 cut(s) 228
StyD4I CCNGG 4 cut(s) 546, 759, 838, 1026
StyI CCWWGG 3 cut(s) 227, 830, 1360
TaaI ACNGT 4 cut(s) 187, 663, 697, 1148
TaiI ACGT 2 cut(s) 802, 1490
TaqI TCGA 2 cut(s) 402, 615
TasI AATT 8 cut(s) 257, 270, 285, 347, 442, 855, 922, 1045
TatI WGTACW 1 cut(s) 874
TauI GCSGC 1 cut(s) 1240
TfiI GAWTC 5 cut(s) 89, 354, 724, 1326, 1526
Tru1I TTAA 6 cut(s) 24, 35, 552, 750, 1044, 1310
Tru9I TTAA 6 cut(s) 24, 35, 552, 750, 1044, 1310
TscAI CASTG 6 cut(s) 301, 668, 700, 897, 1438, 1454
TseFI GTSAC 3 cut(s) 1208, 1316, 1378
TseI GCWGC 6 cut(s) 118, 435, 584, 767, 1012, 1061
Tsp45I GTSAC 3 cut(s) 1208, 1316, 1378
TspDTI ATGAA 4 cut(s) 191, 908, 1238, 1533
TspGWI ACGGA 1 cut(s) 1368
TspRI CASTG 6 cut(s) 301, 668, 700, 897, 1438, 1454
Van91I CCANNNNNTGG 1 cut(s) 1489
Vha464I CTTAAG 1 cut(s) 749
VneI GTGCAC 1 cut(s) 738
VpaK11BI GGWCC 1 cut(s) 754
XapI RAATTY 3 cut(s) 285, 442, 855
XcmI CCANNNNNNNNNTGG 4 cut(s) 230, 767, 1034, 1358
XhoI CTCGAG 1 cut(s) 401
XmaJI CCTAGG 1 cut(s) 227
XmnI GAANNNNTTC 1 cut(s) 1330
XspI CTAG 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.