MD09G1177300.v1.1
ERF Family

2OG-Fe(II) oxygenase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
Physical Location & Seq
Reverse (-)
15188275 .. 15191521
3247 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1177300.v1.1.491

Sequence Viewer

Length: 1419 bp
ATGGCGACATCACCCGCGGCGGACGATTCTCCACGAACCGGGGAGGTCAAGCTCCACAAAGCCTCCGAGGCGGACGTTTTCCTACGAATCGCGGAGGTCAAGCTCGAGGAAACCAACGACGTGGCCGACGTTATCCTCTCGCCGCCGGCCACCCTTCCAATCTCCACAGCCGCTGGGGTTGGAACTCGTGGAACATTTTCTAATGACTCCTCAGGTAACTATGAGTTTCGGGTATCACATCATTCTGAGCATAAACCTGCCACCAGTTCTGCACATCGGCAGGAATGGCATTCATCTGGAAGAGAGGACACGCATTCTCATTCTGAGAGTTTTAAGGAGGGACATAAATCAACTGAGTCCAGGGGTGTTAACCCGAAAGTTTCAAATTTGTCAATTGTCTCAGATTCAAGCTACGGAGAGCATCCTCCTTTGTTTTCTAATCTGAGTTATTCTGAGAATTTGCATACCGGGGTAGAGAGAATGCAGATTAGAGAAACCCCGAGTGAGATGACAGAGGATAGTGTAACTCTGCCCTGCAAATCTGAGGCCCATGGTGTGCCATTCCCTATTAACAGTCCTGTAAATGCAACCAACCAAGGGAAGCCAGAGCCTTCTGAACACTTGACTTTTGATTTATGTCCTCCTAAATCAAGGGGTTCTATTACCCTAAAGGCTCCTCTGCTAGTACAGAATAGAGAAAGGCGGAATGAAATCAAGCGCTCCAAGGAACAGAACAGTGGAAGTGTTTTGCAGTCTGGAATGGTTCTATTAAAAAGTTACCTTTCCCTCGATGACCAGATGAATATGGTCAAGTTATGCCGAGACTTGGGTTTGGGTTCTGGAGGTTTCTACAAACCTGGTTACCGTGATGGAGCAAAGCTGAATTTGATGATGATGTGCCTTGGTAAGAATTGGGACCCTGAGACAAGTCAATATGGAGATCATCGACCTGTTGATGGTGCTATACCGCCAAAGATTCCTGATAAATTCTTTCAGTTGGTTGAAAGTGCAATCAAAGAGTCCCAGTCCCTTATTATGAAAGATTCTAAAACTAGCAATTCCGAAGGCATACTTCCAAGGATGATCCCAGACATATGTCTTGTGAACTTTTACTCATCCTCTGGGCGACTAGGTCTTCATCAGGATCGTGATGAAAGTGAACAAAGTCTCCGCAAATGTTTGCCAGTTGTCTCTTTTTCCATCGGAGATGCTGCAGAATTCTTGTACGGTGAGCAAAGGGATGTTGACAGGGCAAATAAGGTTATACTGGAATCTGGAGATGTTCTAATATTTGGTGGAAAATCGAGGCATGTATTTCATGGTGTATCGTCTATAAAGCCAGACACTGCTCCGAAGACCCTGCTGGAAAAAACAAATCTCCGGCCTGGACGTCTGAATCTTACTTTCAGAGAGTATTGA

Protein Analysis

473

Amino Acids

52.05

Weight (kDa)

6.3

Isoelectric Point (pI)

43.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
2OG-FeII_Oxy_2 PF13532 253 - 470 1.9e-45 2OG-Fe(II) oxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1393
Acc36I ACCTGC 1 cut(s) 265
AccII CGCG 2 cut(s) 17, 92
AclWI GGATC 2 cut(s) 1078, 1152
AcoI YGGCCR 2 cut(s) 123, 147
AcsI RAATTY 5 cut(s) 385, 457, 883, 986, 1217
AcyI GRCGYC 1 cut(s) 1390
AfaI GTAC 2 cut(s) 687, 1226
AfeI AGCGCT 1 cut(s) 719
AfiI CCNNNNNNNGG 4 cut(s) 38, 597, 826, 956
AgsI TTSAA 3 cut(s) 384, 408, 1004
AjiI CACGTC 1 cut(s) 121
AjnI CCWGG 3 cut(s) 359, 856, 1384
AloI GAACNNNNNNTCC 2 cut(s) 1152, 1184
AluBI AGCT 4 cut(s) 52, 103, 411, 880
AluI AGCT 4 cut(s) 52, 103, 411, 880
Alw26I GTCTC 5 cut(s) 403, 816, 917, 1172, 1195
AlwI GGATC 2 cut(s) 1078, 1152
AlwNI CAGNNNCTG 2 cut(s) 173, 1346
Ama87I CYCGRG 2 cut(s) 104, 499
Aor51HI AGCGCT 1 cut(s) 719
AoxI GGCC 4 cut(s) 123, 147, 546, 1382
ApeKI GCWGC 1 cut(s) 1211
ApoI RAATTY 5 cut(s) 385, 457, 883, 986, 1217
Asp700I GAANNNNTTC 1 cut(s) 196
AspLEI GCGC 1 cut(s) 720
AspS9I GGNCC 2 cut(s) 547, 916
AsuC2I CCSGG 2 cut(s) 40, 469
AsuHPI GGTGA 2 cut(s) 3, 1241
AvaI CYCGRG 2 cut(s) 104, 499
AvaII GGWCC 1 cut(s) 916
AxyI CCTNAGG 1 cut(s) 211
BauI CACGAG 1 cut(s) 186
BbsI GAAGAC 2 cut(s) 1127, 1361
BbvI GCAGC 1 cut(s) 1198
BccI CCATC 3 cut(s) 863, 950, 1208
BcgI CGANNNNNNTGC 2 cut(s) 1342, 1376
BciT130I CCWGG 3 cut(s) 361, 858, 1386
BcnI CCSGG 2 cut(s) 40, 469
BcoDI GTCTC 5 cut(s) 403, 816, 917, 1172, 1195
BfaI CTAG 3 cut(s) 683, 1053, 1130
BfmI CTRYAG 1 cut(s) 1212
BfoI RGCGCY 1 cut(s) 721
BfuAI ACCTGC 1 cut(s) 265
BglI GCCNNNNNGGC 1 cut(s) 68
BisI GCNGC 4 cut(s) 18, 143, 171, 1212
BlsI GCNGC 4 cut(s) 19, 144, 172, 1213
Bme1390I CCNGG 5 cut(s) 40, 361, 469, 858, 1386
Bme18I GGWCC 1 cut(s) 916
BmeT110I CYCGRG 2 cut(s) 104, 499
BmgBI CACGTC 1 cut(s) 121
BmgT120I GGNCC 2 cut(s) 547, 916
BmiI GGNNCC 3 cut(s) 675, 917, 918
BmrFI CCNGG 5 cut(s) 40, 361, 469, 858, 1386
BmrI ACTGGG 1 cut(s) 1018
BmsI GCATC 2 cut(s) 430, 1198
BmuI ACTGGG 1 cut(s) 1018
BoxI GACNNNNGTC 1 cut(s) 1095
BpiI GAAGAC 2 cut(s) 1127, 1361
BpmI CTGGAG 2 cut(s) 861, 1296
BpuMI CCSGG 2 cut(s) 40, 469
BsaHI GRCGYC 1 cut(s) 1390
BsaXI ACNNNNNCTCC 4 cut(s) 47, 77, 1152, 1182
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 597, 826, 956
Bse118I RCCGGY 1 cut(s) 145
Bse1I ACTGG 4 cut(s) 264, 1024, 1184, 1272
Bse21I CCTNAGG 1 cut(s) 211
BseBI CCWGG 3 cut(s) 361, 858, 1386
BseGI GGATG 4 cut(s) 421, 1086, 1115, 1246
BseLI CCNNNNNNNGG 4 cut(s) 38, 597, 826, 956
BseMII CTCAG 9 cut(s) 225, 237, 315, 345, 414, 434, 444, 534, 912
BseNI ACTGG 4 cut(s) 264, 1024, 1184, 1272
BseRI GAGGAG 2 cut(s) 199, 666
BseXI GCAGC 1 cut(s) 1198
BseYI CCCAGC 1 cut(s) 173
BsgI GTGCAG 1 cut(s) 255
Bsh1236I CGCG 2 cut(s) 17, 92
BshFI GGCC 4 cut(s) 125, 149, 548, 1384
BsiHKCI CYCGRG 2 cut(s) 104, 499
BsiSI CCGG 4 cut(s) 39, 146, 468, 1381
BslFI GGGAC 4 cut(s) 354, 929, 1006, 1012
BslI CCNNNNNNNGG 4 cut(s) 38, 597, 826, 956
BsmAI GTCTC 5 cut(s) 403, 816, 917, 1172, 1195
BsmFI GGGAC 4 cut(s) 354, 929, 1006, 1012
BsmI GAATGC 3 cut(s) 289, 313, 486
BsnI GGCC 4 cut(s) 125, 149, 548, 1384
BsoBI CYCGRG 2 cut(s) 104, 499
Bsp143I GATC 3 cut(s) 940, 1083, 1144
Bsp19I CCATGG 1 cut(s) 550
BspANI GGCC 4 cut(s) 125, 149, 548, 1384
BspCNI CTCAG 9 cut(s) 224, 238, 316, 346, 413, 435, 445, 535, 913
BspFNI CGCG 2 cut(s) 17, 92
BspLI GGNNCC 3 cut(s) 675, 917, 918
BspMAI CTGCAG 1 cut(s) 1216
BspMI ACCTGC 1 cut(s) 265
BspPI GGATC 2 cut(s) 1078, 1152
BsrFI RCCGGY 1 cut(s) 145
BsrI ACTGG 4 cut(s) 264, 1024, 1184, 1272
BssAI RCCGGY 1 cut(s) 145
BssMI GATC 3 cut(s) 940, 1083, 1144
BssNI GRCGYC 1 cut(s) 1390
BssSI CACGAG 1 cut(s) 186
BssT1I CCWWGG 5 cut(s) 550, 595, 723, 901, 1076
Bst2BI CACGAG 1 cut(s) 186
Bst2UI CCWGG 3 cut(s) 361, 858, 1386
Bst4CI ACNGT 4 cut(s) 575, 737, 866, 1229
Bst6I CTCTTC 1 cut(s) 295
BstACI GRCGYC 1 cut(s) 1390
BstC8I GCNNGC 1 cut(s) 147
BstDEI CTNAG 9 cut(s) 211, 246, 324, 354, 400, 443, 453, 543, 921
BstDSI CCRYGG 2 cut(s) 15, 550
BstEII GGTNACC 1 cut(s) 860
BstF5I GGATG 4 cut(s) 421, 1086, 1115, 1246
BstFNI CGCG 2 cut(s) 17, 92
BstH2I RGCGCY 1 cut(s) 721
BstHHI GCGC 1 cut(s) 720
BstKTI GATC 3 cut(s) 943, 1086, 1147
BstMAI GTCTC 5 cut(s) 403, 816, 917, 1172, 1195
BstMBI GATC 3 cut(s) 940, 1083, 1144
BstMWI GCNNNNNNNGC 2 cut(s) 68, 286
BstNI CCWGG 3 cut(s) 361, 858, 1386
BstNSI RCATGY 1 cut(s) 1313
BstPAI GACNNNNGTC 1 cut(s) 1095
BstPI GGTNACC 1 cut(s) 860
BstSCI CCNGG 5 cut(s) 38, 359, 467, 856, 1384
BstSFI CTRYAG 1 cut(s) 1212
BstUI CGCG 2 cut(s) 17, 92
BstV1I GCAGC 1 cut(s) 1198
BstV2I GAAGAC 2 cut(s) 1127, 1361
BstXI CCANNNNNNTGG 1 cut(s) 121
Bsu36I CCTNAGG 1 cut(s) 211
BsuRI GGCC 4 cut(s) 125, 149, 548, 1384
BtgI CCRYGG 2 cut(s) 15, 550
BtrI CACGTC 1 cut(s) 121
BtsCI GGATG 4 cut(s) 421, 1086, 1115, 1246
BtsI GCAGTG 1 cut(s) 1344
BtsIMutI CAGTG 2 cut(s) 742, 1344
BveI ACCTGC 1 cut(s) 265
Cac8I GCNNGC 1 cut(s) 147
CaiI CAGNNNCTG 2 cut(s) 173, 1346
CfoI GCGC 1 cut(s) 720
Cfr10I RCCGGY 1 cut(s) 145
Cfr13I GGNCC 2 cut(s) 547, 916
Cfr42I CCGCGG 1 cut(s) 18
CsiI ACCWGGT 1 cut(s) 856
Csp6I GTAC 2 cut(s) 686, 1225
CviAII CATG 3 cut(s) 551, 1310, 1319
CviQI GTAC 2 cut(s) 686, 1225
DdeI CTNAG 9 cut(s) 211, 246, 324, 354, 400, 443, 453, 543, 921
DpnI GATC 3 cut(s) 942, 1085, 1146
DpnII GATC 3 cut(s) 940, 1083, 1144
EaeI YGGCCR 2 cut(s) 123, 147
Eam1104I CTCTTC 1 cut(s) 295
EarI CTCTTC 1 cut(s) 295
EciI GGCGGA 3 cut(s) 35, 86, 718
Eco130I CCWWGG 5 cut(s) 550, 595, 723, 901, 1076
Eco47I GGWCC 1 cut(s) 916
Eco47III AGCGCT 1 cut(s) 719
Eco81I CCTNAGG 1 cut(s) 211
Eco88I CYCGRG 2 cut(s) 104, 499
Eco91I GGTNACC 1 cut(s) 860
EcoO109I RGGNCCY 1 cut(s) 916
EcoO65I GGTNACC 1 cut(s) 860
EcoRI GAATTC 1 cut(s) 1217
EcoRII CCWGG 3 cut(s) 359, 856, 1384
EcoT14I CCWWGG 5 cut(s) 550, 595, 723, 901, 1076
ErhI CCWWGG 5 cut(s) 550, 595, 723, 901, 1076
FaeI CATG 3 cut(s) 554, 1313, 1322
FalI AAGNNNNNCTT 2 cut(s) 1056, 1088
FaqI GGGAC 4 cut(s) 354, 929, 1006, 1012
FatI CATG 3 cut(s) 550, 1309, 1318
FauI CCCGC 1 cut(s) 22
FauNDI CATATG 1 cut(s) 1094
Fnu4HI GCNGC 4 cut(s) 18, 143, 171, 1212
FokI GGATG 4 cut(s) 408, 1093, 1102, 1253
Fsp4HI GCNGC 4 cut(s) 18, 143, 171, 1212
FspBI CTAG 3 cut(s) 683, 1053, 1130
GlaI GCGC 1 cut(s) 719
GluI GCNGC 4 cut(s) 18, 143, 171, 1212
GsaI CCCAGC 1 cut(s) 177
GsuI CTGGAG 2 cut(s) 861, 1296
HaeII RGCGCY 1 cut(s) 721
HaeIII GGCC 4 cut(s) 125, 149, 548, 1384
HapII CCGG 4 cut(s) 39, 146, 468, 1381
HhaI GCGC 1 cut(s) 720
Hin1I GRCGYC 1 cut(s) 1390
Hin1II CATG 3 cut(s) 554, 1313, 1322
Hin6I GCGC 1 cut(s) 718
HinP1I GCGC 1 cut(s) 718
HincII GTYRAC 2 cut(s) 370, 1246
HindII GTYRAC 2 cut(s) 370, 1246
HpaI GTTAAC 1 cut(s) 370
HpaII CCGG 4 cut(s) 39, 146, 468, 1381
HphI GGTGA 2 cut(s) 3, 1241
Hpy166II GTNNAC 4 cut(s) 370, 1105, 1160, 1246
Hpy188III TCNNGA 7 cut(s) 297, 756, 840, 980, 1142, 1148, 1275
Hpy8I GTNNAC 4 cut(s) 370, 1105, 1160, 1246
Hpy99I CGWCG 2 cut(s) 122, 131
HpyAV CCTTC 3 cut(s) 164, 621, 1058
HpyCH4III ACNGT 4 cut(s) 575, 737, 866, 1229
HpyCH4IV ACGT 4 cut(s) 75, 120, 129, 1390
HpyCH4V TGCA 8 cut(s) 272, 463, 484, 537, 587, 751, 1010, 1214
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 286
HpyF3I CTNAG 9 cut(s) 211, 246, 324, 354, 400, 443, 453, 543, 921
HpySE526I ACGT 4 cut(s) 75, 120, 129, 1390
Hsp92I GRCGYC 1 cut(s) 1390
Hsp92II CATG 3 cut(s) 554, 1313, 1322
HspAI GCGC 1 cut(s) 718
KflI GGGWCCC 1 cut(s) 916
KroI GCCGGC 1 cut(s) 145
KroNI GCCGGC 1 cut(s) 147
KspAI GTTAAC 1 cut(s) 370
KspI CCGCGG 1 cut(s) 18
Kzo9I GATC 3 cut(s) 940, 1083, 1144
LmnI GCTCC 5 cut(s) 57, 679, 725, 872, 1354
Lsp1109I GCAGC 1 cut(s) 1198
LweI GCATC 2 cut(s) 430, 1198
MabI ACCWGGT 1 cut(s) 856
MaeI CTAG 3 cut(s) 683, 1053, 1130
MaeII ACGT 4 cut(s) 75, 120, 129, 1390
MaeIII GTNAC 4 cut(s) 215, 523, 776, 860
MalI GATC 3 cut(s) 942, 1085, 1146
MboI GATC 3 cut(s) 940, 1083, 1144
MboII GAAGA 3 cut(s) 312, 1127, 1366
MfeI CAATTG 1 cut(s) 393
MluCI AATT 8 cut(s) 385, 393, 457, 883, 910, 986, 1057, 1217
MlyI GAGTC 3 cut(s) 200, 365, 1028
MmeI TCCRAC 1 cut(s) 160
MroNI GCCGGC 1 cut(s) 145
MroXI GAANNNNTTC 1 cut(s) 196
MseI TTAA 4 cut(s) 333, 369, 570, 770
MspA1I CMGCKG 2 cut(s) 17, 173
MspI CCGG 4 cut(s) 39, 146, 468, 1381
MspR9I CCNGG 5 cut(s) 40, 361, 469, 858, 1386
MunI CAATTG 1 cut(s) 393
Mva1269I GAATGC 3 cut(s) 289, 313, 486
MvaI CCWGG 3 cut(s) 361, 858, 1386
MvnI CGCG 2 cut(s) 17, 92
MwoI GCNNNNNNNGC 2 cut(s) 68, 286
NaeI GCCGGC 1 cut(s) 147
NciI CCSGG 2 cut(s) 40, 469
NcoI CCATGG 1 cut(s) 550
NdeI CATATG 1 cut(s) 1094
NdeII GATC 3 cut(s) 940, 1083, 1144
NgoMIV GCCGGC 1 cut(s) 145
NlaIII CATG 3 cut(s) 554, 1313, 1322
NlaIV GGNNCC 3 cut(s) 675, 917, 918
NmeAIII GCCGAG 1 cut(s) 845
NspI RCATGY 1 cut(s) 1313
PaeR7I CTCGAG 1 cut(s) 104
PcsI WCGNNNNNNNCGW 2 cut(s) 123, 126
PctI GAATGC 3 cut(s) 289, 313, 486
PdiI GCCGGC 1 cut(s) 147
PdmI GAANNNNTTC 1 cut(s) 196
PfeI GAWTC 7 cut(s) 26, 87, 404, 976, 1043, 1271, 1396
PflFI GACNNNGTC 1 cut(s) 1131
PkrI GCNGC 4 cut(s) 19, 144, 172, 1213
PleI GAGTC 3 cut(s) 200, 364, 1027
PpsI GAGTC 3 cut(s) 200, 364, 1027
PpuMI RGGWCCY 1 cut(s) 916
PshAI GACNNNNGTC 1 cut(s) 1095
Psp5II RGGWCCY 1 cut(s) 916
Psp6I CCWGG 3 cut(s) 359, 856, 1384
PspEI GGTNACC 1 cut(s) 860
PspFI CCCAGC 1 cut(s) 173
PspGI CCWGG 3 cut(s) 359, 856, 1384
PspN4I GGNNCC 3 cut(s) 675, 917, 918
PspPI GGNCC 2 cut(s) 547, 916
PspPPI RGGWCCY 1 cut(s) 916
PspXI VCTCGAGB 1 cut(s) 104
PstI CTGCAG 1 cut(s) 1216
PstNI CAGNNNCTG 2 cut(s) 173, 1346
PsyI GACNNNGTC 1 cut(s) 1131
RsaI GTAC 2 cut(s) 687, 1226
RsaNI GTAC 2 cut(s) 686, 1225
SacII CCGCGG 1 cut(s) 18
SaqAI TTAA 4 cut(s) 333, 369, 570, 770
SatI GCNGC 4 cut(s) 18, 143, 171, 1212
Sau3AI GATC 3 cut(s) 940, 1083, 1144
Sau96I GGNCC 2 cut(s) 547, 916
SchI GAGTC 3 cut(s) 200, 365, 1028
ScrFI CCNGG 5 cut(s) 40, 361, 469, 858, 1386
SexAI ACCWGGT 1 cut(s) 856
SfaNI GCATC 2 cut(s) 430, 1198
SfcI CTRYAG 1 cut(s) 1212
Sfr274I CTCGAG 1 cut(s) 104
Sfr303I CCGCGG 1 cut(s) 18
SgrBI CCGCGG 1 cut(s) 18
SinI GGWCC 1 cut(s) 916
SlaI CTCGAG 1 cut(s) 104
SmlI CTYRAG 1 cut(s) 104
SmoI CTYRAG 1 cut(s) 104
Sse9I AATT 8 cut(s) 385, 393, 457, 883, 910, 986, 1057, 1217
SspI AATATT 1 cut(s) 1290
SspMI CTAG 3 cut(s) 683, 1053, 1130
StyD4I CCNGG 5 cut(s) 38, 359, 467, 856, 1384
StyI CCWWGG 5 cut(s) 550, 595, 723, 901, 1076
TaaI ACNGT 4 cut(s) 575, 737, 866, 1229
TaiI ACGT 4 cut(s) 78, 123, 132, 1393
TaqI TCGA 4 cut(s) 105, 789, 946, 1304
TasI AATT 8 cut(s) 385, 393, 457, 883, 910, 986, 1057, 1217
TatI WGTACW 1 cut(s) 685
TauI GCSGC 3 cut(s) 20, 145, 173
TfiI GAWTC 7 cut(s) 26, 87, 404, 976, 1043, 1271, 1396
Tru1I TTAA 4 cut(s) 333, 369, 570, 770
Tru9I TTAA 4 cut(s) 333, 369, 570, 770
TscAI CASTG 2 cut(s) 742, 1351
TseI GCWGC 1 cut(s) 1211
TspDTI ATGAA 7 cut(s) 282, 723, 815, 1052, 1127, 1167, 1307
TspGWI ACGGA 1 cut(s) 429
TspRI CASTG 2 cut(s) 742, 1351
Tth111I GACNNNGTC 1 cut(s) 1131
VpaK11BI GGWCC 1 cut(s) 916
XapI RAATTY 5 cut(s) 385, 457, 883, 986, 1217
XceI RCATGY 1 cut(s) 1313
XhoI CTCGAG 1 cut(s) 104
XmnI GAANNNNTTC 1 cut(s) 196
XspI CTAG 3 cut(s) 683, 1053, 1130
ZraI GACGTC 1 cut(s) 1391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.