Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0007047

Physical Location & Seq

Genomic Coordinates Forward (+)

66607314 .. 66611620

Gene Structure 4307 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG451800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2478 bp

ATGAATCGCGATCAAGCTCGAGGAAGAAGCCCACGAGGCGGACGAGGCTCTGGGAATCGCGGCCAAGGCCGAGGAAACCCCCGAGGCGGTCGACATTCTCAGCCACATCGCTCCACTTATGAATGGCGTCCATCTGAAAGAAAAGATGCACTTTCTCAAGCTGAGAAACAGAAGGAATGGCGTCCATCTGAAAGAAAATTGGAAGGAATGGTGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCTGCTGATGACTTTTCTGGTAATAAGGAGGGTTCGTCAACAGGTGAAATGGGAAGTCCCCAGGACACGTTTCTGTGTAGCTCTTCAAAGCATCCTGAGCATAAACCTGTCTGGAGTCTAGAAAATCGGAAGGAATGGCATCCATCTGAAAGAAAAGATGCGCTTTCTCAAGCTGAGAAACAGAAGGAATGGCATCCATCTGAAAGAAAAGATGCACTTTCTCAAGCTGAGAAACAGAAGGAATGGCGTCCATCTGAAAGAAAATTGGAAGGAATGGCGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCTGCTAATGACTTTTCTGGTAATAAGGAGGGTTCGTCAACAGGCGAAATGGGAAGTCCCCAGGACACGTTTCTGTGTAGCTCTTCAAAGCATCCTGAGCATAAACCTGTCTGGAGTCAAGAAAATTGGAAGGAATGGCATCCATCTGAAAGAAAAGATGCGCTTTCTCAAGCTGAGAAACAGAAGGAATGGCATCCATCTGAAAGAAAAGATGCACTTTCTCAAGCTGAGAAACAGAAGGAATGGCGTCCATCTGAAAGAAAATTGGAAGGAATGGCGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCTGCTAATGACTTTTCTGGTAATAAGGAGGGGTCGTCAACCGGTGAAATGGGAAGTCCCCAGGACACGTTTCCGTGTAGCTCTTCAAAGCATCCTGAGCATAAACCTGTCTGGAGTCAAGAAAATCGGAAGGAATGGCATCCATCTGAAAGAAAAGATGCGCTTTCTCAAGCTGAGAAACAGAAGGAATGGCATCCATCTGAAAGAAAAGATGCACTTTCTCAAGCTGAGAAACAGAAGGAATGGCGTCCATCTGAAAGAAAATTGGAAGGAATGGCGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCTGCTAATGACTTTTCTGGTAATAAGGAGGGGTCGTCAACAGGTGAAATGGGAAGTCCCCAGGACACGTTTCCGTGTAGCTCTTCAAAGCATCCTGAGCATAAACCTGTCTGGAGTCAAGAAAATCGGAAGGAATGGCATCCATCTGAAAGAAAAGATGCATGTTCTCATGCTGAGAAACTGAAGGAAGGACACAACTCAACTGAGTTTGTGGAAGTTAATTCAAAAGAATTAAAGCGCTCGGTTGCCTCAGATTCGGGCCATATAGGGGACATTTCTTCATTGTCTAGTCTTAATCTTTCCCACAATTTGCATAAGGGAGTAGAGAGAATGCAGATTGGAGAAAACTTTAGTAAGATGACAGGGGGTAGTGACAATCATATGCAATCTAAATCAGAAGCCAAAGACAAGCCTTTCCCTATCAAGAGTCCTATAAGTTCATTTGGCCATCAAAAACCAGAGCTTTCTGAACACAAAGCAGTAGACTCTTCTTTTGATTTGTGCCCAACCAAAGCCAGCGGTGTTGTTACTCTAAAGACTTCTCTTCTTGTACAGAATAGAGAAAGGAAGAATGAAATCAAGCGCTCCATGGAACAACCAAGTGAAATTGTTTTACAGTCTGGAATGGTTCTTCTTAAAAGTCACATTTCTACCAGTGACCAGATCAAGATAGTGAAGCTATGCCGAGACCTGGGTTTGGGTACTGGAGGTTTCTACCAACCTGGTTACCGTGATGGAGCAAAACTGAATTTGAAGATGATGTGCCTCGGTAAGAATTGGGATCCTGAGACTAGCAAATATGGAGATCAGCGCCCTCATGATGGTGCTAAACCTCCACGTATTCCTGTTGATTTCTTTCGGTTGGTTGAAAATGCAATAAAAGAAAGCCATTCCCTTATCAGAAAGAATTATAAAGCTAGCAATTCTGAAGACATACTTCCTCGGATGACCCCAGACATTTGCCTTGTGAACTTCTACTCATCAACTGGGCGACTAGGTCTCCATCAGGATCGTGATGAAAGTGAACAAAGTCTCAGTAAGCATTTGCCTGTTGTCTCTTTTTCCATTGGAGATGCTGCAGAATTCTTGTATGGTGATCAAAGGGATGTTGAACTGGCAAAGAAGATTACACTGGAATCTGGAGATGTTCTGATATTTGGTGGAGAATCAAGACATATCTTTCACGGTGTAGCTTCTATACAGCCAAATACTGCTCCTAAGACCCTACTGGAAGAATCAAAGCTCCAGCCTGGCCGCCTGAATCTTACTTTCAGAAAGTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005506 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006259 GO:0006281 GO:0006304 GO:0006307 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008198 GO:0009451 GO:0009987 GO:0016070 GO:0016491 GO:0016705 GO:0016706 GO:0032451 GO:0033554 GO:0034641 GO:0035510 GO:0035511 GO:0035513 GO:0035515 GO:0035552 GO:0035553 GO:0042245 GO:0043167 GO:0043169 GO:0043170 GO:0043412 GO:0043734 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0046872 GO:0046914 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0070579 GO:0070988 GO:0070989 GO:0071704 GO:0080111 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

2OG-FeII_Oxy_2

Protein Analysis

825

Amino Acids

92.33

Weight (kDa)

8.88

Isoelectric Point (pI)

49.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
2OG-FeII_Oxy_2	PF13532	606 - 823	5.4e-46	2OG-Fe(II) oxygenase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007047)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G14140 AT3G14160
fragaria_vesca	FvH4_6g35240 FvH4_6g35240
malus_domestica	MD09G1177300.v1.1
prunus_persica	Prupe.3G036700_v2.0.a1 Prupe.3G036700_v2.0.a1 Prupe.3G036700_v2.0.a1 Prupe.3G036700_v2.0.a1
pyrus_communis	pycom09g09550
rosa_chinensis	RchiOBHm_Chr2g0146601
rosa_laevigata	RLG00000020209
rosa_multiflora	Rmu_sc0001986.1_g000030
rosa_roxburghii	Rroxscaffold_2G00100020
rosa_rugosa	Rorug02G0395100 Rorug02G0395200 Rorug02G0395300 Rorug02G0395400 Rorug02G0395500 Rorug02G0395600
rosa_samantha	Rh2AG451800 Rh2BG464600 Rh2CG438700 Rh2DG473600
rosa_wichuraiana	Rw2G036910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2106
AccI	GTMKAC	2 cut(s)	91, 1677
AccII	CGCG	2 cut(s)	9, 60
AciI	CCGC	5 cut(s)	39, 60, 87, 1713, 2449
AclWI	GGATC	3 cut(s)	1970, 1983, 2211
AcoI	YGGCCR	3 cut(s)	61, 1639, 2446
AcsI	RAATTY	6 cut(s)	237, 552, 867, 1182, 1942, 2276
AcuI	CTGAAG	2 cut(s)	1397, 2142
AcyI	GRCGYC	5 cut(s)	127, 181, 496, 811, 1126
AfaI	GTAC	2 cut(s)	1746, 1897
AfeI	AGCGCT	2 cut(s)	1433, 1778
AflIII	ACRYGT	4 cut(s)	315, 630, 945, 1260
AgeI	ACCGGT	1 cut(s)	920
AgsI	TTSAA	8 cut(s)	336, 651, 966, 1281, 1419, 1948, 2063, 2306
Alw26I	GTCTC	5 cut(s)	1875, 1976, 2198, 2231, 2254
AlwI	GGATC	3 cut(s)	1970, 1983, 2211
Ama87I	CYCGRG	2 cut(s)	18, 81
Aor51HI	AGCGCT	2 cut(s)	1433, 1778
AoxI	GGCC	5 cut(s)	61, 67, 1453, 1639, 2446
ApeKI	GCWGC	5 cut(s)	223, 538, 853, 1168, 2270
ApoI	RAATTY	6 cut(s)	237, 552, 867, 1182, 1942, 2276
ArsI	GACNNNNNNTTYG	2 cut(s)	1670, 1702
AsiGI	ACCGGT	1 cut(s)	920
AspLEI	GCGC	6 cut(s)	412, 727, 1042, 1434, 1779, 2007
AspS9I	GGNCC	5 cut(s)	245, 560, 875, 1190, 1453
AsuHPI	GGTGA	5 cut(s)	223, 305, 935, 1250, 2300
AsuNHI	GCTAGC	1 cut(s)	2111
AvaI	CYCGRG	2 cut(s)	18, 81
AvaII	GGWCC	4 cut(s)	245, 560, 875, 1190
BaeGI	GKGCMC	1 cut(s)	1700
BalI	TGGCCA	1 cut(s)	1641
BamHI	GGATCC	1 cut(s)	1975
BauI	CACGAG	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	2130
BbvI	GCAGC	5 cut(s)	235, 550, 865, 1180, 2257
BclI	TGATCA	2 cut(s)	213, 2290
BcoDI	GTCTC	5 cut(s)	1875, 1976, 2198, 2231, 2254
BfaI	CTAG	5 cut(s)	368, 1482, 1986, 2112, 2189
BfmI	CTRYAG	1 cut(s)	2271
BfoI	RGCGCY	3 cut(s)	1435, 1780, 2008
BglI	GCCNNNNNGGC	1 cut(s)	36
BisI	GCNGC	7 cut(s)	61, 224, 539, 854, 1169, 2271, 2449
BlsI	GCNGC	7 cut(s)	62, 225, 540, 855, 1170, 2272, 2450
Bme18I	GGWCC	4 cut(s)	245, 560, 875, 1190
BmeT110I	CYCGRG	2 cut(s)	18, 81
BmgT120I	GGNCC	5 cut(s)	245, 560, 875, 1190, 1453
BmiI	GGNNCC	1 cut(s)	1977
BmrI	ACTGGG	1 cut(s)	2190
BmtI	GCTAGC	1 cut(s)	2115
BmuI	ACTGGG	1 cut(s)	2190
BpiI	GAAGAC	1 cut(s)	2130
Bpu10I	CCTNAGC	4 cut(s)	345, 660, 975, 1290
BpuEI	CTTGAG	7 cut(s)	141, 402, 456, 717, 771, 1032, 1086
BsaAI	YACGTR	1 cut(s)	2033
BsaHI	GRCGYC	5 cut(s)	127, 181, 496, 811, 1126
BsaI	GGTCTC	2 cut(s)	1875, 2198
BsaWI	WCCGGW	1 cut(s)	920
Bse118I	RCCGGY	1 cut(s)	920
Bse1I	ACTGG	6 cut(s)	1848, 1903, 2185, 2313, 2331, 2427
BseNI	ACTGG	6 cut(s)	1848, 1903, 2185, 2313, 2331, 2427
BseSI	GKGCMC	1 cut(s)	1700
BseXI	GCAGC	5 cut(s)	235, 550, 865, 1180, 2257
Bsh1236I	CGCG	2 cut(s)	9, 60
Bsh1285I	CGRYCG	1 cut(s)	91
BshFI	GGCC	5 cut(s)	63, 69, 1455, 1641, 2448
BshTI	ACCGGT	1 cut(s)	920
BsiEI	CGRYCG	1 cut(s)	91
BsiHKCI	CYCGRG	2 cut(s)	18, 81
BsiSI	CCGG	1 cut(s)	921
BslFI	GGGAC	5 cut(s)	291, 606, 921, 1236, 1478
BsmAI	GTCTC	5 cut(s)	1875, 1976, 2198, 2231, 2254
BsmFI	GGGAC	5 cut(s)	291, 606, 921, 1236, 1478
BsmI	GAATGC	1 cut(s)	1530
BsnI	GGCC	5 cut(s)	63, 69, 1455, 1641, 2448
Bso31I	GGTCTC	2 cut(s)	1875, 2198
BsoBI	CYCGRG	2 cut(s)	18, 81
Bsp1286I	GDGCHC	1 cut(s)	1700
Bsp1407I	TGTACA	1 cut(s)	1744
Bsp19I	CCATGG	1 cut(s)	1782
Bsp68I	TCGCGA	1 cut(s)	9
BspACI	CCGC	5 cut(s)	39, 60, 87, 1713, 2449
BspANI	GGCC	5 cut(s)	63, 69, 1455, 1641, 2448
BspFNI	CGCG	2 cut(s)	9, 60
BspHI	TCATGA	1 cut(s)	2011
BspLI	GGNNCC	1 cut(s)	1977
BspMAI	CTGCAG	1 cut(s)	2275
BspOI	GCTAGC	1 cut(s)	2115
BspPI	GGATC	3 cut(s)	1970, 1983, 2211
BspQI	GCTCTTC	4 cut(s)	337, 652, 967, 1282
BspTNI	GGTCTC	2 cut(s)	1875, 2198
BsrFI	RCCGGY	1 cut(s)	920
BsrGI	TGTACA	1 cut(s)	1744
BsrI	ACTGG	6 cut(s)	1848, 1903, 2185, 2313, 2331, 2427
BssAI	RCCGGY	1 cut(s)	920
BssNI	GRCGYC	5 cut(s)	127, 181, 496, 811, 1126
BssSI	CACGAG	1 cut(s)	33
BssT1I	CCWWGG	2 cut(s)	64, 1782
Bst2BI	CACGAG	1 cut(s)	33
Bst4CI	ACNGT	3 cut(s)	1812, 1925, 2381
Bst6I	CTCTTC	6 cut(s)	337, 652, 967, 1282, 1687, 1743
BstACI	GRCGYC	5 cut(s)	127, 181, 496, 811, 1126
BstAUI	TGTACA	1 cut(s)	1744
BstBAI	YACGTR	1 cut(s)	2033
BstC8I	GCNNGC	2 cut(s)	1711, 2113
BstDSI	CCRYGG	1 cut(s)	1782
BstEII	GGTNACC	1 cut(s)	1919
BstFNI	CGCG	2 cut(s)	9, 60
BstH2I	RGCGCY	3 cut(s)	1435, 1780, 2008
BstHHI	GCGC	6 cut(s)	412, 727, 1042, 1434, 1779, 2007
BstMAI	GTCTC	5 cut(s)	1875, 1976, 2198, 2231, 2254
BstMCI	CGRYCG	1 cut(s)	91
BstMWI	GCNNNNNNNGC	7 cut(s)	36, 45, 66, 346, 661, 976, 1291
BstNSI	RCATGY	1 cut(s)	1359
BstPI	GGTNACC	1 cut(s)	1919
BstSFI	CTRYAG	1 cut(s)	2271
BstSLI	GKGCMC	1 cut(s)	1700
BstUI	CGCG	2 cut(s)	9, 60
BstV1I	GCAGC	5 cut(s)	235, 550, 865, 1180, 2257
BstV2I	GAAGAC	1 cut(s)	2130
BstX2I	RGATCY	1 cut(s)	1975
BstYI	RGATCY	1 cut(s)	1975
BsuRI	GGCC	5 cut(s)	63, 69, 1455, 1641, 2448
BtgI	CCRYGG	1 cut(s)	1782
BtgZI	GCGATG	1 cut(s)	92
BtsIMutI	CAGTG	2 cut(s)	1855, 2324
BtuMI	TCGCGA	1 cut(s)	9
Cac8I	GCNNGC	2 cut(s)	1711, 2113
CciI	TCATGA	1 cut(s)	2011
CfoI	GCGC	6 cut(s)	412, 727, 1042, 1434, 1779, 2007
Cfr10I	RCCGGY	1 cut(s)	920
Cfr13I	GGNCC	5 cut(s)	245, 560, 875, 1190, 1453
CseI	GACGC	5 cut(s)	116, 170, 485, 800, 1115
CsiI	ACCWGGT	1 cut(s)	1915
Csp6I	GTAC	2 cut(s)	1745, 1896
CspAI	ACCGGT	1 cut(s)	920
CviAII	CATG	8 cut(s)	242, 557, 872, 1187, 1356, 1364, 1783, 2012
CviQI	GTAC	2 cut(s)	1745, 1896
EaeI	YGGCCR	3 cut(s)	61, 1639, 2446
Eam1104I	CTCTTC	6 cut(s)	337, 652, 967, 1282, 1687, 1743
EarI	CTCTTC	6 cut(s)	337, 652, 967, 1282, 1687, 1743
EciI	GGCGGA	1 cut(s)	54
Eco130I	CCWWGG	2 cut(s)	64, 1782
Eco31I	GGTCTC	2 cut(s)	1875, 2198
Eco47I	GGWCC	4 cut(s)	245, 560, 875, 1190
Eco47III	AGCGCT	2 cut(s)	1433, 1778
Eco57I	CTGAAG	2 cut(s)	1397, 2142
Eco88I	CYCGRG	2 cut(s)	18, 81
Eco91I	GGTNACC	1 cut(s)	1919
EcoO65I	GGTNACC	1 cut(s)	1919
EcoRI	GAATTC	5 cut(s)	237, 552, 867, 1182, 2276
EcoT14I	CCWWGG	2 cut(s)	64, 1782
EcoT22I	ATGCAT	1 cut(s)	1357
ErhI	CCWWGG	2 cut(s)	64, 1782
FaeI	CATG	8 cut(s)	245, 560, 875, 1190, 1359, 1367, 1786, 2015
FaqI	GGGAC	5 cut(s)	291, 606, 921, 1236, 1478
FatI	CATG	8 cut(s)	241, 556, 871, 1186, 1355, 1363, 1782, 2011
FauNDI	CATATG	1 cut(s)	1575
FbaI	TGATCA	2 cut(s)	213, 2290
FblI	GTMKAC	2 cut(s)	91, 1677
Fnu4HI	GCNGC	7 cut(s)	61, 224, 539, 854, 1169, 2271, 2449
Fsp4HI	GCNGC	7 cut(s)	61, 224, 539, 854, 1169, 2271, 2449
FspBI	CTAG	5 cut(s)	368, 1482, 1986, 2112, 2189
GlaI	GCGC	6 cut(s)	411, 726, 1041, 1433, 1778, 2006
GluI	GCNGC	7 cut(s)	61, 224, 539, 854, 1169, 2271, 2449
HaeII	RGCGCY	3 cut(s)	1435, 1780, 2008
HaeIII	GGCC	5 cut(s)	63, 69, 1455, 1641, 2448
HapII	CCGG	1 cut(s)	921
HgaI	GACGC	5 cut(s)	116, 170, 485, 800, 1115
HhaI	GCGC	6 cut(s)	412, 727, 1042, 1434, 1779, 2007
Hin1I	GRCGYC	5 cut(s)	127, 181, 496, 811, 1126
Hin1II	CATG	8 cut(s)	245, 560, 875, 1190, 1359, 1367, 1786, 2015
Hin6I	GCGC	6 cut(s)	410, 725, 1040, 1432, 1777, 2005
HinP1I	GCGC	6 cut(s)	410, 725, 1040, 1432, 1777, 2005
HincII	GTYRAC	5 cut(s)	92, 288, 603, 918, 1233
HindII	GTYRAC	5 cut(s)	92, 288, 603, 918, 1233
HpaII	CCGG	1 cut(s)	921
HphI	GGTGA	5 cut(s)	223, 305, 935, 1250, 2300
Hpy166II	GTNNAC	8 cut(s)	92, 288, 603, 918, 1233, 1678, 2164, 2219
Hpy8I	GTNNAC	8 cut(s)	92, 288, 603, 918, 1233, 1678, 2164, 2219
HpyCH4III	ACNGT	3 cut(s)	1812, 1925, 2381
HpyCH4IV	ACGT	5 cut(s)	317, 632, 947, 1262, 2032
HpyF10VI	GCNNNNNNNGC	7 cut(s)	36, 45, 66, 346, 661, 976, 1291
HpySE526I	ACGT	5 cut(s)	317, 632, 947, 1262, 2032
Hsp92I	GRCGYC	5 cut(s)	127, 181, 496, 811, 1126
Hsp92II	CATG	8 cut(s)	245, 560, 875, 1190, 1359, 1367, 1786, 2015
HspAI	GCGC	6 cut(s)	410, 725, 1040, 1432, 1777, 2005
Ksp22I	TGATCA	2 cut(s)	213, 2290
LguI	GCTCTTC	4 cut(s)	337, 652, 967, 1282
LmnI	GCTCC	9 cut(s)	116, 230, 545, 860, 1175, 1784, 1931, 2413, 2442
Lsp1109I	GCAGC	5 cut(s)	235, 550, 865, 1180, 2257
MabI	ACCWGGT	1 cut(s)	1915
MaeI	CTAG	5 cut(s)	368, 1482, 1986, 2112, 2189
MaeII	ACGT	5 cut(s)	317, 632, 947, 1262, 2032
MaeIII	GTNAC	5 cut(s)	1565, 1720, 1835, 1850, 1919
MflI	RGATCY	1 cut(s)	1975
MhlI	GDGCHC	1 cut(s)	1700
MlsI	TGGCCA	1 cut(s)	1641
MluNI	TGGCCA	1 cut(s)	1641
MlyI	GAGTC	6 cut(s)	373, 688, 1003, 1318, 1630, 1673
Mox20I	TGGCCA	1 cut(s)	1641
Mph1103I	ATGCAT	1 cut(s)	1357
MscI	TGGCCA	1 cut(s)	1641
MseI	TTAA	4 cut(s)	1413, 1427, 1488, 1830
MslI	CAYNNNNRTG	1 cut(s)	2016
Msp20I	TGGCCA	1 cut(s)	1641
MspA1I	CMGCKG	1 cut(s)	1713
MspI	CCGG	1 cut(s)	921
Mva1269I	GAATGC	1 cut(s)	1530
MvnI	CGCG	2 cut(s)	9, 60
MwoI	GCNNNNNNNGC	7 cut(s)	36, 45, 66, 346, 661, 976, 1291
NcoI	CCATGG	1 cut(s)	1782
NdeI	CATATG	1 cut(s)	1575
NheI	GCTAGC	1 cut(s)	2111
NlaIII	CATG	8 cut(s)	245, 560, 875, 1190, 1359, 1367, 1786, 2015
NlaIV	GGNNCC	1 cut(s)	1977
NmeAIII	GCCGAG	2 cut(s)	95, 1904
NmuCI	GTSAC	3 cut(s)	1565, 1835, 1850
NruI	TCGCGA	1 cut(s)	9
NsiI	ATGCAT	1 cut(s)	1357
NspI	RCATGY	1 cut(s)	1359
PaeR7I	CTCGAG	1 cut(s)	18
PagI	TCATGA	1 cut(s)	2011
PciSI	GCTCTTC	4 cut(s)	337, 652, 967, 1282
PcsI	WCGNNNNNNNCGW	1 cut(s)	40
PctI	GAATGC	1 cut(s)	1530
PfeI	GAWTC	7 cut(s)	4, 55, 1448, 2330, 2360, 2429, 2455
PflFI	GACNNNGTC	1 cut(s)	2190
PinAI	ACCGGT	1 cut(s)	920
PkrI	GCNGC	7 cut(s)	62, 225, 540, 855, 1170, 2272, 2450
PleI	GAGTC	6 cut(s)	372, 687, 1002, 1317, 1629, 1673
PpsI	GAGTC	6 cut(s)	372, 687, 1002, 1317, 1629, 1673
Ppu21I	YACGTR	1 cut(s)	2033
PsiI	TTATAA	1 cut(s)	2106
PspEI	GGTNACC	1 cut(s)	1919
PspN4I	GGNNCC	1 cut(s)	1977
PspPI	GGNCC	5 cut(s)	245, 560, 875, 1190, 1453
PspXI	VCTCGAGB	1 cut(s)	18
PstI	CTGCAG	1 cut(s)	2275
PsuI	RGATCY	1 cut(s)	1975
PsyI	GACNNNGTC	1 cut(s)	2190
RruI	TCGCGA	1 cut(s)	9
RsaI	GTAC	2 cut(s)	1746, 1897
RsaNI	GTAC	2 cut(s)	1745, 1896
RseI	CAYNNNNRTG	1 cut(s)	2016
SalI	GTCGAC	1 cut(s)	90
SapI	GCTCTTC	4 cut(s)	337, 652, 967, 1282
SaqAI	TTAA	4 cut(s)	1413, 1427, 1488, 1830
SatI	GCNGC	7 cut(s)	61, 224, 539, 854, 1169, 2271, 2449
Sau96I	GGNCC	5 cut(s)	245, 560, 875, 1190, 1453
SchI	GAGTC	6 cut(s)	373, 688, 1003, 1318, 1630, 1673
SduI	GDGCHC	1 cut(s)	1700
SexAI	ACCWGGT	1 cut(s)	1915
SfcI	CTRYAG	1 cut(s)	2271
Sfr274I	CTCGAG	1 cut(s)	18
SinI	GGWCC	4 cut(s)	245, 560, 875, 1190
SlaI	CTCGAG	1 cut(s)	18
SmiMI	CAYNNNNRTG	1 cut(s)	2016
SmlI	CTYRAG	8 cut(s)	18, 156, 417, 471, 732, 786, 1047, 1101
SmoI	CTYRAG	8 cut(s)	18, 156, 417, 471, 732, 786, 1047, 1101
SsiI	CCGC	5 cut(s)	39, 60, 87, 1713, 2449
SspMI	CTAG	5 cut(s)	368, 1482, 1986, 2112, 2189
StyI	CCWWGG	2 cut(s)	64, 1782
TaaI	ACNGT	3 cut(s)	1812, 1925, 2381
TaiI	ACGT	5 cut(s)	320, 635, 950, 1265, 2035
TaqI	TCGA	2 cut(s)	19, 91
TatI	WGTACW	1 cut(s)	1744
TauI	GCSGC	2 cut(s)	63, 2451
TfiI	GAWTC	7 cut(s)	4, 55, 1448, 2330, 2360, 2429, 2455
Tru1I	TTAA	4 cut(s)	1413, 1427, 1488, 1830
Tru9I	TTAA	4 cut(s)	1413, 1427, 1488, 1830
TscAI	CASTG	2 cut(s)	1855, 2331
TseFI	GTSAC	3 cut(s)	1565, 1835, 1850
TseI	GCWGC	5 cut(s)	223, 538, 853, 1168, 2270
Tsp45I	GTSAC	3 cut(s)	1565, 1835, 1850
TspGWI	ACGGA	2 cut(s)	942, 1257
TspRI	CASTG	2 cut(s)	1855, 2331
Tth111I	GACNNNGTC	1 cut(s)	2190
VpaK11BI	GGWCC	4 cut(s)	245, 560, 875, 1190
XapI	RAATTY	6 cut(s)	237, 552, 867, 1182, 1942, 2276
XbaI	TCTAGA	1 cut(s)	367
XceI	RCATGY	1 cut(s)	1359
XhoI	CTCGAG	1 cut(s)	18
XmiI	GTMKAC	2 cut(s)	91, 1677
XspI	CTAG	5 cut(s)	368, 1482, 1986, 2112, 2189
Zsp2I	ATGCAT	1 cut(s)	1357

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.