Rmu_sc0001986.1_g000030
ERF Family

2OG-Fe(II) oxygenase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001986.1
Physical Location & Seq
Forward (+)
118396 .. 121738
3343 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001986.1_g000030.1.cds

Sequence Viewer

Length: 2208 bp
atgaatcgcgatcaagctcgaggaagaagcccacgaggcggacgaggctctgggaatcgcggccaaggccgaggaaacccccgaggcggtcgacattctcagccacagcgctccacttatgaatggcgtccatctcaaaaaaaagatgcactttctgaagctgagaaacagaaggaatgccgtccatctgaaagaaaattggaaggaatggcgatcaaacagcagcctggagctggaattcatggaccttcacctaatgactttgctggtaataaggagggttcgtcaacaggtgaaatgggaagtccccaggacatgtttccgtgtagctcttcaaagcatcctgagcaaaaacctgtctggagtcaagaaaatcggaatgaatggcctccatctgaaagaaaattggaaggaatggcgatcaaacagcagcctggagctggaattcatggaccttcccctaatgactttgctggtaataaggagggttcgtcaacaggtgaaatgggaagtccccaggacatgtttccgtgtagctcttcaaagcatcctgagcaaaaacctgtctggagtcacgaaaatcggaatgaatggcctccatctgaaagaaaattggaaggaatggcgatcaaacagcagcctggagctggaattcatggaccttctgctaatgacttttctggtaataaggagggttcgtcaacagatgaaatgggaagtccccaggacatgtttccgtgtagctcttcaaagcatcctgagcataaacctgtctggagtcaagaaaatcagaaggaacggcatccatctgaaagaaaagatgcactttctgaagctgagaaacagaaggaatggcctccatctgaaagaaaattggaaggaatggcgatcaaacagcagcctggagctggaattcatggaccttctgctaatgacttttctggtaacaaggagggttcgtcaacaggtgaaatgggaagtccccaggacatgtttccgtgtagctcttcaaagcatcctgagcataaacctgtctggagtcaagaaaatcagaaggaacggcatccatctgaaagaaaagatgcactttctcatgctgtggaactgaaggaaggacacaactcaactgagtttgtggaagttaattcaaaagaagtaaagcgctcagttgcctcagattcgggccatataggggacatttcttcattgtctagtcttaatctttcccacaatttgcataagggagtagagagaatgcagattggagaaaactttaggaagatgacaaggggtagtgacaatcatatgcaatctaaatcagaagccaaagacaagccgttccctatcaagagtcctataagttcatttggccatcaaaaaccagagctttctgaacacaaagcagtagactcttcttttgatttgtgcccaaccaaagccagcggtgctgttactctaaagacttctcttcttgtacagaatagagaaaggaagaatgaaatcaagcgctccatggaacaaccaattgaaattgttttacagtctggaatggttcttcttaaaagttacatttctaccagtgaccagatcaagatagtgaagctatgccgagacctgggtttgggtcctggaggtttctacaaacctggttaccgtgatggagcaaaactgaatttgatgatgatgtgccttggtaagaattgggatcctgagactagcaaatatggagatcaccgccctcatgatggtgctaaacctccatttattcctgttgatttctttcggttggttgaaaatgcaataaaagacagccattcccttatcagaaaggattctaaagctagcaattctgaatacatacttcctcggatgaccccagacatttgccttgtgaacttctactcatcaactgggcgactaggtctccatcaggatcgtgatgaaagtgaacaaagtctccgtaagcagttgcctgttgtctctttttccattggagatgctgcagaattcttgtatggtgatcaaagggatgttgaactagcaaagaagattacactggaatctggagatgttctcatatttggtggagaatcaagacatatctttcacggtgtagcttctatacagccaaatactgctcctaagaccctactggaagaaacaaagctccagcctggccgcctgaatcttactttcagaaagtattga

Protein Analysis

735

Amino Acids

81.44

Weight (kDa)

8.67

Isoelectric Point (pI)

51.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 91, 1407
AccII CGCG 2 cut(s) 9, 60
AciI CCGC 6 cut(s) 39, 60, 87, 1443, 1735, 2179
AclWI GGATC 3 cut(s) 1700, 1713, 1941
AcoI YGGCCR 3 cut(s) 61, 1369, 2176
AcsI RAATTY 6 cut(s) 237, 444, 651, 912, 1672, 2006
AcuI CTGAAG 3 cut(s) 177, 852, 1127
AcyI GRCGYC 1 cut(s) 127
AfaI GTAC 1 cut(s) 1476
AfeI AGCGCT 3 cut(s) 110, 1163, 1508
AflIII ACRYGT 4 cut(s) 315, 522, 729, 990
AgsI TTSAA 8 cut(s) 336, 543, 750, 1011, 1149, 1529, 1793, 2036
AloI GAACNNNNNNTCC 2 cut(s) 1941, 1973
Alw26I GTCTC 5 cut(s) 1605, 1706, 1928, 1961, 1984
AlwI GGATC 3 cut(s) 1700, 1713, 1941
Ama87I CYCGRG 2 cut(s) 18, 81
Aor51HI AGCGCT 3 cut(s) 110, 1163, 1508
AoxI GGCC 8 cut(s) 61, 67, 386, 593, 854, 1183, 1369, 2176
ApeKI GCWGC 5 cut(s) 223, 430, 637, 898, 2000
ApoI RAATTY 6 cut(s) 237, 444, 651, 912, 1672, 2006
ArsI GACNNNNNNTTYG 2 cut(s) 1400, 1432
Asp700I GAANNNNTTC 1 cut(s) 1831
AspLEI GCGC 3 cut(s) 111, 1164, 1509
AspS9I GGNCC 6 cut(s) 245, 452, 659, 920, 1183, 1625
AsuHPI GGTGA 6 cut(s) 243, 305, 512, 980, 1724, 2030
AsuNHI GCTAGC 1 cut(s) 1841
AvaI CYCGRG 2 cut(s) 18, 81
AvaII GGWCC 5 cut(s) 245, 452, 659, 920, 1625
BaeGI GKGCMC 1 cut(s) 1430
BalI TGGCCA 1 cut(s) 1371
BamHI GGATCC 1 cut(s) 1705
BauI CACGAG 1 cut(s) 33
BbvI GCAGC 5 cut(s) 235, 442, 649, 910, 1987
BceAI ACGGC 4 cut(s) 165, 815, 1076, 1321
BclI TGATCA 1 cut(s) 2020
BcoDI GTCTC 5 cut(s) 1605, 1706, 1928, 1961, 1984
BfaI CTAG 5 cut(s) 1212, 1716, 1842, 1919, 2039
BfmI CTRYAG 1 cut(s) 2001
BfoI RGCGCY 3 cut(s) 112, 1165, 1510
BglI GCCNNNNNGGC 1 cut(s) 36
BisI GCNGC 7 cut(s) 61, 224, 431, 638, 899, 2001, 2179
BlsI GCNGC 7 cut(s) 62, 225, 432, 639, 900, 2002, 2180
Bme18I GGWCC 5 cut(s) 245, 452, 659, 920, 1625
BmeT110I CYCGRG 2 cut(s) 18, 81
BmgT120I GGNCC 6 cut(s) 245, 452, 659, 920, 1183, 1625
BmiI GGNNCC 2 cut(s) 1626, 1707
BmrI ACTGGG 1 cut(s) 1920
BmtI GCTAGC 1 cut(s) 1845
BmuI ACTGGG 1 cut(s) 1920
BplI GAGNNNNNCTC 2 cut(s) 2058, 2090
Bpu10I CCTNAGC 4 cut(s) 345, 552, 759, 1020
BsaHI GRCGYC 1 cut(s) 127
BsaI GGTCTC 2 cut(s) 1605, 1928
Bse1I ACTGG 4 cut(s) 1578, 1915, 2061, 2157
BseGI GGATG 8 cut(s) 340, 547, 754, 802, 1015, 1063, 1875, 2035
BseNI ACTGG 4 cut(s) 1578, 1915, 2061, 2157
BseSI GKGCMC 1 cut(s) 1430
BseXI GCAGC 5 cut(s) 235, 442, 649, 910, 1987
Bsh1236I CGCG 2 cut(s) 9, 60
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 8 cut(s) 63, 69, 388, 595, 856, 1185, 1371, 2178
BsiEI CGRYCG 1 cut(s) 91
BsiHKCI CYCGRG 2 cut(s) 18, 81
BslFI GGGAC 5 cut(s) 291, 498, 705, 966, 1208
BsmAI GTCTC 5 cut(s) 1605, 1706, 1928, 1961, 1984
BsmFI GGGAC 5 cut(s) 291, 498, 705, 966, 1208
BsmI GAATGC 2 cut(s) 182, 1260
BsnI GGCC 8 cut(s) 63, 69, 388, 595, 856, 1185, 1371, 2178
Bso31I GGTCTC 2 cut(s) 1605, 1928
BsoBI CYCGRG 2 cut(s) 18, 81
Bsp1286I GDGCHC 1 cut(s) 1430
Bsp1407I TGTACA 1 cut(s) 1474
Bsp19I CCATGG 1 cut(s) 1512
Bsp68I TCGCGA 1 cut(s) 9
BspACI CCGC 6 cut(s) 39, 60, 87, 1443, 1735, 2179
BspANI GGCC 8 cut(s) 63, 69, 388, 595, 856, 1185, 1371, 2178
BspFNI CGCG 2 cut(s) 9, 60
BspHI TCATGA 1 cut(s) 1741
BspLI GGNNCC 2 cut(s) 1626, 1707
BspMAI CTGCAG 1 cut(s) 2005
BspOI GCTAGC 1 cut(s) 1845
BspPI GGATC 3 cut(s) 1700, 1713, 1941
BspQI GCTCTTC 4 cut(s) 337, 544, 751, 1012
BspTNI GGTCTC 2 cut(s) 1605, 1928
BsrGI TGTACA 1 cut(s) 1474
BsrI ACTGG 4 cut(s) 1578, 1915, 2061, 2157
BssNI GRCGYC 1 cut(s) 127
BssSI CACGAG 1 cut(s) 33
BssT1I CCWWGG 3 cut(s) 64, 1512, 1690
Bst2BI CACGAG 1 cut(s) 33
Bst4CI ACNGT 3 cut(s) 1542, 1655, 2111
Bst6I CTCTTC 6 cut(s) 337, 544, 751, 1012, 1417, 1473
BstACI GRCGYC 1 cut(s) 127
BstAUI TGTACA 1 cut(s) 1474
BstC8I GCNNGC 2 cut(s) 1441, 1843
BstDSI CCRYGG 1 cut(s) 1512
BstEII GGTNACC 1 cut(s) 1649
BstF5I GGATG 8 cut(s) 340, 547, 754, 802, 1015, 1063, 1875, 2035
BstFNI CGCG 2 cut(s) 9, 60
BstH2I RGCGCY 3 cut(s) 112, 1165, 1510
BstHHI GCGC 3 cut(s) 111, 1164, 1509
BstMAI GTCTC 5 cut(s) 1605, 1706, 1928, 1961, 1984
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 8 cut(s) 36, 45, 66, 346, 553, 760, 1021, 1445
BstNSI RCATGY 4 cut(s) 319, 526, 733, 994
BstPI GGTNACC 1 cut(s) 1649
BstSFI CTRYAG 1 cut(s) 2001
BstSLI GKGCMC 1 cut(s) 1430
BstUI CGCG 2 cut(s) 9, 60
BstV1I GCAGC 5 cut(s) 235, 442, 649, 910, 1987
BstX2I RGATCY 1 cut(s) 1705
BstYI RGATCY 1 cut(s) 1705
BsuRI GGCC 8 cut(s) 63, 69, 388, 595, 856, 1185, 1371, 2178
BtgI CCRYGG 1 cut(s) 1512
BtsCI GGATG 8 cut(s) 340, 547, 754, 802, 1015, 1063, 1875, 2035
BtsIMutI CAGTG 2 cut(s) 1585, 2054
BtuMI TCGCGA 1 cut(s) 9
Cac8I GCNNGC 2 cut(s) 1441, 1843
CciI TCATGA 1 cut(s) 1741
CfoI GCGC 3 cut(s) 111, 1164, 1509
Cfr13I GGNCC 6 cut(s) 245, 452, 659, 920, 1183, 1625
CseI GACGC 1 cut(s) 116
CsiI ACCWGGT 1 cut(s) 1645
Csp6I GTAC 1 cut(s) 1475
CviQI GTAC 1 cut(s) 1475
EaeI YGGCCR 3 cut(s) 61, 1369, 2176
Eam1104I CTCTTC 6 cut(s) 337, 544, 751, 1012, 1417, 1473
EarI CTCTTC 6 cut(s) 337, 544, 751, 1012, 1417, 1473
EciI GGCGGA 1 cut(s) 54
Eco130I CCWWGG 3 cut(s) 64, 1512, 1690
Eco31I GGTCTC 2 cut(s) 1605, 1928
Eco47I GGWCC 5 cut(s) 245, 452, 659, 920, 1625
Eco47III AGCGCT 3 cut(s) 110, 1163, 1508
Eco57I CTGAAG 3 cut(s) 177, 852, 1127
Eco88I CYCGRG 2 cut(s) 18, 81
Eco91I GGTNACC 1 cut(s) 1649
EcoO109I RGGNCCY 1 cut(s) 1625
EcoO65I GGTNACC 1 cut(s) 1649
EcoRI GAATTC 5 cut(s) 237, 444, 651, 912, 2006
EcoT14I CCWWGG 3 cut(s) 64, 1512, 1690
ErhI CCWWGG 3 cut(s) 64, 1512, 1690
FalI AAGNNNNNCTT 6 cut(s) 135, 167, 810, 842, 1071, 1103
FaqI GGGAC 5 cut(s) 291, 498, 705, 966, 1208
FauNDI CATATG 1 cut(s) 1305
FbaI TGATCA 1 cut(s) 2020
FblI GTMKAC 2 cut(s) 91, 1407
Fnu4HI GCNGC 7 cut(s) 61, 224, 431, 638, 899, 2001, 2179
FokI GGATG 8 cut(s) 327, 534, 741, 789, 1002, 1050, 1882, 2042
Fsp4HI GCNGC 7 cut(s) 61, 224, 431, 638, 899, 2001, 2179
FspBI CTAG 5 cut(s) 1212, 1716, 1842, 1919, 2039
GlaI GCGC 3 cut(s) 110, 1163, 1508
GluI GCNGC 7 cut(s) 61, 224, 431, 638, 899, 2001, 2179
HaeII RGCGCY 3 cut(s) 112, 1165, 1510
HaeIII GGCC 8 cut(s) 63, 69, 388, 595, 856, 1185, 1371, 2178
HgaI GACGC 1 cut(s) 116
HhaI GCGC 3 cut(s) 111, 1164, 1509
Hin1I GRCGYC 1 cut(s) 127
Hin6I GCGC 3 cut(s) 109, 1162, 1507
HinP1I GCGC 3 cut(s) 109, 1162, 1507
HincII GTYRAC 5 cut(s) 92, 288, 495, 702, 963
HindII GTYRAC 5 cut(s) 92, 288, 495, 702, 963
HphI GGTGA 6 cut(s) 243, 305, 512, 980, 1724, 2030
Hpy166II GTNNAC 8 cut(s) 92, 288, 495, 702, 963, 1408, 1894, 1949
Hpy8I GTNNAC 8 cut(s) 92, 288, 495, 702, 963, 1408, 1894, 1949
HpyCH4III ACNGT 3 cut(s) 1542, 1655, 2111
HpyCH4V TGCA 8 cut(s) 149, 824, 1085, 1237, 1258, 1309, 1799, 2003
HpyF10VI GCNNNNNNNGC 8 cut(s) 36, 45, 66, 346, 553, 760, 1021, 1445
Hsp92I GRCGYC 1 cut(s) 127
HspAI GCGC 3 cut(s) 109, 1162, 1507
Ksp22I TGATCA 1 cut(s) 2020
LguI GCTCTTC 4 cut(s) 337, 544, 751, 1012
LmnI GCTCC 9 cut(s) 116, 230, 437, 644, 905, 1514, 1661, 2143, 2172
Lsp1109I GCAGC 5 cut(s) 235, 442, 649, 910, 1987
MabI ACCWGGT 1 cut(s) 1645
MaeI CTAG 5 cut(s) 1212, 1716, 1842, 1919, 2039
MaeIII GTNAC 7 cut(s) 572, 944, 1295, 1450, 1565, 1580, 1649
MfeI CAATTG 1 cut(s) 1524
MflI RGATCY 1 cut(s) 1705
MhlI GDGCHC 1 cut(s) 1430
MlsI TGGCCA 1 cut(s) 1371
MluNI TGGCCA 1 cut(s) 1371
MlyI GAGTC 6 cut(s) 373, 580, 787, 1048, 1360, 1403
Mox20I TGGCCA 1 cut(s) 1371
MroXI GAANNNNTTC 1 cut(s) 1831
MscI TGGCCA 1 cut(s) 1371
MseI TTAA 3 cut(s) 1143, 1218, 1560
MslI CAYNNNNRTG 1 cut(s) 1746
Msp20I TGGCCA 1 cut(s) 1371
MspA1I CMGCKG 1 cut(s) 1443
MunI CAATTG 1 cut(s) 1524
Mva1269I GAATGC 2 cut(s) 182, 1260
MvnI CGCG 2 cut(s) 9, 60
MwoI GCNNNNNNNGC 8 cut(s) 36, 45, 66, 346, 553, 760, 1021, 1445
NcoI CCATGG 1 cut(s) 1512
NdeI CATATG 1 cut(s) 1305
NheI GCTAGC 1 cut(s) 1841
NlaIV GGNNCC 2 cut(s) 1626, 1707
NmeAIII GCCGAG 2 cut(s) 95, 1634
NmuCI GTSAC 3 cut(s) 572, 1295, 1580
NruI TCGCGA 1 cut(s) 9
NspI RCATGY 4 cut(s) 319, 526, 733, 994
PaeR7I CTCGAG 1 cut(s) 18
PagI TCATGA 1 cut(s) 1741
PciI ACATGT 4 cut(s) 315, 522, 729, 990
PciSI GCTCTTC 4 cut(s) 337, 544, 751, 1012
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 2 cut(s) 182, 1260
PdmI GAANNNNTTC 1 cut(s) 1831
PfeI GAWTC 7 cut(s) 4, 55, 1178, 1832, 2060, 2090, 2185
PflFI GACNNNGTC 1 cut(s) 1920
PfoI TCCNGGA 1 cut(s) 1627
PkrI GCNGC 7 cut(s) 62, 225, 432, 639, 900, 2002, 2180
PleI GAGTC 6 cut(s) 372, 579, 786, 1047, 1359, 1403
PpsI GAGTC 6 cut(s) 372, 579, 786, 1047, 1359, 1403
PpuMI RGGWCCY 1 cut(s) 1625
PscI ACATGT 4 cut(s) 315, 522, 729, 990
Psp5II RGGWCCY 1 cut(s) 1625
PspEI GGTNACC 1 cut(s) 1649
PspN4I GGNNCC 2 cut(s) 1626, 1707
PspPI GGNCC 6 cut(s) 245, 452, 659, 920, 1183, 1625
PspPPI RGGWCCY 1 cut(s) 1625
PspXI VCTCGAGB 1 cut(s) 18
PstI CTGCAG 1 cut(s) 2005
PsuI RGATCY 1 cut(s) 1705
PsyI GACNNNGTC 1 cut(s) 1920
RruI TCGCGA 1 cut(s) 9
RsaI GTAC 1 cut(s) 1476
RsaNI GTAC 1 cut(s) 1475
RseI CAYNNNNRTG 1 cut(s) 1746
SalI GTCGAC 1 cut(s) 90
SapI GCTCTTC 4 cut(s) 337, 544, 751, 1012
SaqAI TTAA 3 cut(s) 1143, 1218, 1560
SatI GCNGC 7 cut(s) 61, 224, 431, 638, 899, 2001, 2179
Sau96I GGNCC 6 cut(s) 245, 452, 659, 920, 1183, 1625
SchI GAGTC 6 cut(s) 373, 580, 787, 1048, 1360, 1403
SduI GDGCHC 1 cut(s) 1430
SexAI ACCWGGT 1 cut(s) 1645
SfcI CTRYAG 1 cut(s) 2001
Sfr274I CTCGAG 1 cut(s) 18
SinI GGWCC 5 cut(s) 245, 452, 659, 920, 1625
SlaI CTCGAG 1 cut(s) 18
SmiMI CAYNNNNRTG 1 cut(s) 1746
SmlI CTYRAG 1 cut(s) 18
SmoI CTYRAG 1 cut(s) 18
SsiI CCGC 6 cut(s) 39, 60, 87, 1443, 1735, 2179
SspMI CTAG 5 cut(s) 1212, 1716, 1842, 1919, 2039
StyI CCWWGG 3 cut(s) 64, 1512, 1690
TaaI ACNGT 3 cut(s) 1542, 1655, 2111
TaqI TCGA 2 cut(s) 19, 91
TatI WGTACW 1 cut(s) 1474
TauI GCSGC 2 cut(s) 63, 2181
TfiI GAWTC 7 cut(s) 4, 55, 1178, 1832, 2060, 2090, 2185
Tru1I TTAA 3 cut(s) 1143, 1218, 1560
Tru9I TTAA 3 cut(s) 1143, 1218, 1560
TscAI CASTG 2 cut(s) 1585, 2061
TseFI GTSAC 3 cut(s) 572, 1295, 1580
TseI GCWGC 5 cut(s) 223, 430, 637, 898, 2000
Tsp45I GTSAC 3 cut(s) 572, 1295, 1580
TspGWI ACGGA 5 cut(s) 312, 519, 726, 987, 1949
TspRI CASTG 2 cut(s) 1585, 2061
Tth111I GACNNNGTC 1 cut(s) 1920
VpaK11BI GGWCC 5 cut(s) 245, 452, 659, 920, 1625
XapI RAATTY 6 cut(s) 237, 444, 651, 912, 1672, 2006
XceI RCATGY 4 cut(s) 319, 526, 733, 994
XhoI CTCGAG 1 cut(s) 18
XmiI GTMKAC 2 cut(s) 91, 1407
XmnI GAANNNNTTC 1 cut(s) 1831
XspI CTAG 5 cut(s) 1212, 1716, 1842, 1919, 2039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.