Rh2BG464600
ERF Family

2OG-Fe(II) oxygenase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
65644786 .. 65648621
3836 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG464600.1

Sequence Viewer

Length: 1437 bp
ATGAATCGCGATCAAGCTCGAGGAAGAAGCCCACGAGGCGGACGAGGCTCTGGGAATCGCGGCCAAGGCCGAGGAAACCCCCGAGGCGGTCGACATTCTCAGCCACAGCGTTCCACTTATGAATGGCGTCCATCTCAAAAAAAAGATGCACTTTCTGAAGCTGAGAAACAGAAGGAATGCCGTCCATCTGAAAGAAAATTGGAAGGAATGGCGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCACCTAATGACTTTGCTGGTAATAAGGAGGGTTCGTCAACAGGTGAAATGGGAAGTCCCCAGGACATGTTTCCGTGTAGCTCTTCAAAGCATCCTGAGCAAAAACCTGTCTGGAGTCAAGAAAATCGGAATGAATGGCCTCCATCTGAAAGAAAATTGGAAGGAATGGCGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCTGCTAATGACTTTTCTGGTAATAAGGAGGGTTCGTCAACAGATGAAATGGGAAGTCCCCAGGACATGTTTCCGTGTAGCTCTTCAAAGCATCCTGAGCATAAACCTGTCTGGAGTCAAGAAAATCAGAAGGAACGGCATCCATCTGAAAGAAAAGATGCACTTTCTGAAGCTGAGAAACAGAAGGAATGGCCTCCATCTGAAAGAAAATTGGAAGGAATGGCGATCAAACAGCAGCCTGGAGCTGGAATTCATGGACCTTCTGCTAATGACTTTTCTGGTAACAAGGAGGGTTCGTCAACAGGTGAAATGGGAAGTCCCCAGGACATGTTTCCGTGTAGCTCTTCAAAGCATCCTGAGCATAAACCTGTCTGGAGTCAAGAAAATCAGAAGGAACGGCATCCATCTGAAAGAAAAGATGCACTTTCTCATGCTGTGGAACTGAAGGAAGGACACAACTCAACTGAGTTTGTGGAAGTTAATTCAAAAGAAGTAAAGCGCTCAGTTGCCTCAGATTCGGGCCATATAGGGGACATTTCTTCATTGTCTAGTCTTAATCTTTCCCACAATTTGCATAAGGGAGTAGAGAGAATGCAGATTGGAGAAAACTTTAGGAAGATGACAAGGGGTAGTGACAATCATATGCAATCTAAATCAGAAGCCAAAGACAAGCCGTTCCCTATCAAGAGTCCTATAAGTTCATTTGGCCATCAAAAACCAGAGCTTTCTGAACACAAAGCAGTAGACTCTTCTTTTGATTTGTGCCCAACCAAAGCCAGCGGTGCTGTTACTCTAAAGACTTCTCTTCTTGTACAGAATAGAGAAAGGAAGAATGAAATCAAGCGCTCCATGGAACAACCAATTGAAATTGTTTTACAGTCTGGAATGGTTCTTCTTAAAAGTTACATTTCTACCAGTGACCAGGTGCTGCTTTTTGCTTCTTTTATTTCTCTTTTTTCCTATGATACTTTTGCCTTTTAA

Protein Analysis

478

Amino Acids

52.87

Weight (kDa)

8.74

Isoelectric Point (pI)

55.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 91, 1200
AccII CGCG 2 cut(s) 9, 60
AciI CCGC 4 cut(s) 39, 60, 87, 1236
AcoI YGGCCR 2 cut(s) 61, 1162
AcsI RAATTY 3 cut(s) 237, 444, 705
AcuI CTGAAG 3 cut(s) 177, 645, 920
AcyI GRCGYC 1 cut(s) 127
AfaI GTAC 1 cut(s) 1269
AfeI AGCGCT 2 cut(s) 956, 1301
AfiI CCNNNNNNNGG 6 cut(s) 38, 86, 233, 440, 701, 985
AflIII ACRYGT 3 cut(s) 315, 522, 783
AgsI TTSAA 5 cut(s) 336, 543, 804, 942, 1322
AjnI CCWGG 7 cut(s) 226, 309, 433, 516, 694, 777, 1377
AlwNI CAGNNNCTG 1 cut(s) 1384
Ama87I CYCGRG 2 cut(s) 18, 81
Aor51HI AGCGCT 2 cut(s) 956, 1301
AoxI GGCC 6 cut(s) 61, 67, 386, 647, 976, 1162
ApeKI GCWGC 4 cut(s) 223, 430, 691, 1384
ApoI RAATTY 3 cut(s) 237, 444, 705
ArsI GACNNNNNNTTYG 2 cut(s) 1193, 1225
AspLEI GCGC 2 cut(s) 957, 1302
AspS9I GGNCC 4 cut(s) 245, 452, 713, 976
AsuHPI GGTGA 3 cut(s) 243, 305, 773
AvaI CYCGRG 2 cut(s) 18, 81
AvaII GGWCC 3 cut(s) 245, 452, 713
BaeGI GKGCMC 1 cut(s) 1223
BalI TGGCCA 1 cut(s) 1164
BauI CACGAG 1 cut(s) 33
BbvI GCAGC 4 cut(s) 235, 442, 703, 1371
BccI CCATC 7 cut(s) 139, 193, 400, 607, 661, 868, 1173
BceAI ACGGC 4 cut(s) 165, 608, 869, 1114
BciT130I CCWGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
BfaI CTAG 1 cut(s) 1005
BfoI RGCGCY 2 cut(s) 958, 1303
BglI GCCNNNNNGGC 1 cut(s) 36
BisI GCNGC 5 cut(s) 61, 224, 431, 692, 1385
BlsI GCNGC 5 cut(s) 62, 225, 432, 693, 1386
Bme1390I CCNGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
Bme18I GGWCC 3 cut(s) 245, 452, 713
BmeT110I CYCGRG 2 cut(s) 18, 81
BmgT120I GGNCC 4 cut(s) 245, 452, 713, 976
BmrFI CCNGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
BmsI GCATC 8 cut(s) 136, 349, 556, 604, 604, 817, 865, 865
BpmI CTGGAG 6 cut(s) 249, 382, 456, 589, 717, 850
Bpu10I CCTNAGC 3 cut(s) 345, 552, 813
BsaHI GRCGYC 1 cut(s) 127
BsaJI CCNNGG 7 cut(s) 64, 70, 82, 309, 516, 777, 1305
BsaXI ACNNNNNCTCC 6 cut(s) 269, 299, 476, 506, 737, 767
Bsc4I CCNNNNNNNGG 6 cut(s) 38, 86, 233, 440, 701, 985
Bse1I ACTGG 1 cut(s) 1371
BseBI CCWGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
BseDI CCNNGG 7 cut(s) 64, 70, 82, 309, 516, 777, 1305
BseGI GGATG 5 cut(s) 340, 547, 595, 808, 856
BseLI CCNNNNNNNGG 6 cut(s) 38, 86, 233, 440, 701, 985
BseMII CTCAG 9 cut(s) 113, 153, 336, 543, 621, 804, 912, 972, 981
BseNI ACTGG 1 cut(s) 1371
BseSI GKGCMC 1 cut(s) 1223
BseXI GCAGC 4 cut(s) 235, 442, 703, 1371
Bsh1236I CGCG 2 cut(s) 9, 60
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 6 cut(s) 63, 69, 388, 649, 978, 1164
BsiEI CGRYCG 1 cut(s) 91
BsiHKCI CYCGRG 2 cut(s) 18, 81
BslFI GGGAC 4 cut(s) 291, 498, 759, 1001
BslI CCNNNNNNNGG 6 cut(s) 38, 86, 233, 440, 701, 985
BsmFI GGGAC 4 cut(s) 291, 498, 759, 1001
BsmI GAATGC 2 cut(s) 182, 1053
BsnI GGCC 6 cut(s) 63, 69, 388, 649, 978, 1164
BsoBI CYCGRG 2 cut(s) 18, 81
Bsp1286I GDGCHC 1 cut(s) 1223
Bsp1407I TGTACA 1 cut(s) 1267
Bsp143I GATC 4 cut(s) 10, 213, 420, 681
Bsp19I CCATGG 1 cut(s) 1305
Bsp68I TCGCGA 1 cut(s) 9
BspACI CCGC 4 cut(s) 39, 60, 87, 1236
BspANI GGCC 6 cut(s) 63, 69, 388, 649, 978, 1164
BspCNI CTCAG 9 cut(s) 112, 154, 337, 544, 622, 805, 913, 971, 980
BspFNI CGCG 2 cut(s) 9, 60
BspQI GCTCTTC 3 cut(s) 337, 544, 805
BsrGI TGTACA 1 cut(s) 1267
BsrI ACTGG 1 cut(s) 1371
BssECI CCNNGG 7 cut(s) 64, 70, 82, 309, 516, 777, 1305
BssMI GATC 4 cut(s) 10, 213, 420, 681
BssNI GRCGYC 1 cut(s) 127
BssSI CACGAG 1 cut(s) 33
BssT1I CCWWGG 2 cut(s) 64, 1305
Bst2BI CACGAG 1 cut(s) 33
Bst2UI CCWGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
Bst4CI ACNGT 1 cut(s) 1335
Bst6I CTCTTC 5 cut(s) 337, 544, 805, 1210, 1266
BstACI GRCGYC 1 cut(s) 127
BstAUI TGTACA 1 cut(s) 1267
BstC8I GCNNGC 1 cut(s) 1234
BstDEI CTNAG 9 cut(s) 99, 162, 345, 552, 630, 813, 921, 958, 967
BstDSI CCRYGG 1 cut(s) 1305
BstF5I GGATG 5 cut(s) 340, 547, 595, 808, 856
BstFNI CGCG 2 cut(s) 9, 60
BstH2I RGCGCY 2 cut(s) 958, 1303
BstHHI GCGC 2 cut(s) 957, 1302
BstKTI GATC 4 cut(s) 13, 216, 423, 684
BstMBI GATC 4 cut(s) 10, 213, 420, 681
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 7 cut(s) 36, 45, 66, 346, 553, 814, 1238
BstNI CCWGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
BstNSI RCATGY 3 cut(s) 319, 526, 787
BstSCI CCNGG 7 cut(s) 226, 309, 433, 516, 694, 777, 1377
BstSLI GKGCMC 1 cut(s) 1223
BstUI CGCG 2 cut(s) 9, 60
BstV1I GCAGC 4 cut(s) 235, 442, 703, 1371
BsuRI GGCC 6 cut(s) 63, 69, 388, 649, 978, 1164
BtgI CCRYGG 1 cut(s) 1305
BtsCI GGATG 5 cut(s) 340, 547, 595, 808, 856
BtsIMutI CAGTG 1 cut(s) 1378
BtuMI TCGCGA 1 cut(s) 9
Cac8I GCNNGC 1 cut(s) 1234
CaiI CAGNNNCTG 1 cut(s) 1384
CfoI GCGC 2 cut(s) 957, 1302
Cfr13I GGNCC 4 cut(s) 245, 452, 713, 976
CseI GACGC 1 cut(s) 116
CsiI ACCWGGT 1 cut(s) 1377
Csp6I GTAC 1 cut(s) 1268
CviAII CATG 8 cut(s) 242, 316, 449, 523, 710, 784, 887, 1306
CviQI GTAC 1 cut(s) 1268
DdeI CTNAG 9 cut(s) 99, 162, 345, 552, 630, 813, 921, 958, 967
DpnI GATC 4 cut(s) 12, 215, 422, 683
DpnII GATC 4 cut(s) 10, 213, 420, 681
EaeI YGGCCR 2 cut(s) 61, 1162
Eam1104I CTCTTC 5 cut(s) 337, 544, 805, 1210, 1266
EarI CTCTTC 5 cut(s) 337, 544, 805, 1210, 1266
EciI GGCGGA 1 cut(s) 54
Eco130I CCWWGG 2 cut(s) 64, 1305
Eco47I GGWCC 3 cut(s) 245, 452, 713
Eco47III AGCGCT 2 cut(s) 956, 1301
Eco57I CTGAAG 3 cut(s) 177, 645, 920
Eco88I CYCGRG 2 cut(s) 18, 81
EcoRI GAATTC 3 cut(s) 237, 444, 705
EcoRII CCWGG 7 cut(s) 226, 309, 433, 516, 694, 777, 1377
EcoT14I CCWWGG 2 cut(s) 64, 1305
ErhI CCWWGG 2 cut(s) 64, 1305
FaeI CATG 8 cut(s) 245, 319, 452, 526, 713, 787, 890, 1309
FalI AAGNNNNNCTT 6 cut(s) 135, 167, 603, 635, 864, 896
FaqI GGGAC 4 cut(s) 291, 498, 759, 1001
FatI CATG 8 cut(s) 241, 315, 448, 522, 709, 783, 886, 1305
FauNDI CATATG 1 cut(s) 1098
FblI GTMKAC 2 cut(s) 91, 1200
Fnu4HI GCNGC 5 cut(s) 61, 224, 431, 692, 1385
FokI GGATG 5 cut(s) 327, 534, 582, 795, 843
Fsp4HI GCNGC 5 cut(s) 61, 224, 431, 692, 1385
FspBI CTAG 1 cut(s) 1005
GlaI GCGC 2 cut(s) 956, 1301
GluI GCNGC 5 cut(s) 61, 224, 431, 692, 1385
GsuI CTGGAG 6 cut(s) 249, 382, 456, 589, 717, 850
HaeII RGCGCY 2 cut(s) 958, 1303
HaeIII GGCC 6 cut(s) 63, 69, 388, 649, 978, 1164
HgaI GACGC 1 cut(s) 116
HhaI GCGC 2 cut(s) 957, 1302
Hin1I GRCGYC 1 cut(s) 127
Hin1II CATG 8 cut(s) 245, 319, 452, 526, 713, 787, 890, 1309
Hin6I GCGC 2 cut(s) 955, 1300
HinP1I GCGC 2 cut(s) 955, 1300
HincII GTYRAC 4 cut(s) 92, 288, 495, 756
HindII GTYRAC 4 cut(s) 92, 288, 495, 756
HinfI GANTC 8 cut(s) 4, 55, 364, 571, 832, 971, 1144, 1202
HphI GGTGA 3 cut(s) 243, 305, 773
Hpy166II GTNNAC 5 cut(s) 92, 288, 495, 756, 1201
Hpy8I GTNNAC 5 cut(s) 92, 288, 495, 756, 1201
HpyCH4III ACNGT 1 cut(s) 1335
HpyCH4V TGCA 6 cut(s) 149, 617, 878, 1030, 1051, 1102
HpyF10VI GCNNNNNNNGC 7 cut(s) 36, 45, 66, 346, 553, 814, 1238
HpyF3I CTNAG 9 cut(s) 99, 162, 345, 552, 630, 813, 921, 958, 967
Hsp92I GRCGYC 1 cut(s) 127
Hsp92II CATG 8 cut(s) 245, 319, 452, 526, 713, 787, 890, 1309
HspAI GCGC 2 cut(s) 955, 1300
Kzo9I GATC 4 cut(s) 10, 213, 420, 681
LguI GCTCTTC 3 cut(s) 337, 544, 805
LmnI GCTCC 4 cut(s) 230, 437, 698, 1307
Lsp1109I GCAGC 4 cut(s) 235, 442, 703, 1371
LweI GCATC 8 cut(s) 136, 349, 556, 604, 604, 817, 865, 865
MabI ACCWGGT 1 cut(s) 1377
MaeI CTAG 1 cut(s) 1005
MaeIII GTNAC 5 cut(s) 737, 1088, 1243, 1358, 1373
MalI GATC 4 cut(s) 12, 215, 422, 683
MboI GATC 4 cut(s) 10, 213, 420, 681
MfeI CAATTG 1 cut(s) 1317
MhlI GDGCHC 1 cut(s) 1223
MlsI TGGCCA 1 cut(s) 1164
MluNI TGGCCA 1 cut(s) 1164
MlyI GAGTC 5 cut(s) 373, 580, 841, 1153, 1196
Mox20I TGGCCA 1 cut(s) 1164
MscI TGGCCA 1 cut(s) 1164
MseI TTAA 4 cut(s) 936, 1011, 1353, 1435
Msp20I TGGCCA 1 cut(s) 1164
MspA1I CMGCKG 1 cut(s) 1236
MspR9I CCNGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
MunI CAATTG 1 cut(s) 1317
Mva1269I GAATGC 2 cut(s) 182, 1053
MvaI CCWGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
MvnI CGCG 2 cut(s) 9, 60
MwoI GCNNNNNNNGC 7 cut(s) 36, 45, 66, 346, 553, 814, 1238
NcoI CCATGG 1 cut(s) 1305
NdeI CATATG 1 cut(s) 1098
NdeII GATC 4 cut(s) 10, 213, 420, 681
NlaIII CATG 8 cut(s) 245, 319, 452, 526, 713, 787, 890, 1309
NmeAIII GCCGAG 1 cut(s) 95
NmuCI GTSAC 2 cut(s) 1088, 1373
NruI TCGCGA 1 cut(s) 9
NspI RCATGY 3 cut(s) 319, 526, 787
PaeR7I CTCGAG 1 cut(s) 18
PciI ACATGT 3 cut(s) 315, 522, 783
PciSI GCTCTTC 3 cut(s) 337, 544, 805
PcsI WCGNNNNNNNCGW 1 cut(s) 40
PctI GAATGC 2 cut(s) 182, 1053
PfeI GAWTC 3 cut(s) 4, 55, 971
PkrI GCNGC 5 cut(s) 62, 225, 432, 693, 1386
PleI GAGTC 5 cut(s) 372, 579, 840, 1152, 1196
PpsI GAGTC 5 cut(s) 372, 579, 840, 1152, 1196
PscI ACATGT 3 cut(s) 315, 522, 783
Psp6I CCWGG 7 cut(s) 226, 309, 433, 516, 694, 777, 1377
PspGI CCWGG 7 cut(s) 226, 309, 433, 516, 694, 777, 1377
PspPI GGNCC 4 cut(s) 245, 452, 713, 976
PspXI VCTCGAGB 1 cut(s) 18
PstNI CAGNNNCTG 1 cut(s) 1384
RruI TCGCGA 1 cut(s) 9
RsaI GTAC 1 cut(s) 1269
RsaNI GTAC 1 cut(s) 1268
SalI GTCGAC 1 cut(s) 90
SapI GCTCTTC 3 cut(s) 337, 544, 805
SaqAI TTAA 4 cut(s) 936, 1011, 1353, 1435
SatI GCNGC 5 cut(s) 61, 224, 431, 692, 1385
Sau3AI GATC 4 cut(s) 10, 213, 420, 681
Sau96I GGNCC 4 cut(s) 245, 452, 713, 976
SchI GAGTC 5 cut(s) 373, 580, 841, 1153, 1196
ScrFI CCNGG 7 cut(s) 228, 311, 435, 518, 696, 779, 1379
SduI GDGCHC 1 cut(s) 1223
SexAI ACCWGGT 1 cut(s) 1377
SfaNI GCATC 8 cut(s) 136, 349, 556, 604, 604, 817, 865, 865
Sfr274I CTCGAG 1 cut(s) 18
SinI GGWCC 3 cut(s) 245, 452, 713
SlaI CTCGAG 1 cut(s) 18
SmlI CTYRAG 1 cut(s) 18
SmoI CTYRAG 1 cut(s) 18
SsiI CCGC 4 cut(s) 39, 60, 87, 1236
SspMI CTAG 1 cut(s) 1005
StyD4I CCNGG 7 cut(s) 226, 309, 433, 516, 694, 777, 1377
StyI CCWWGG 2 cut(s) 64, 1305
TaaI ACNGT 1 cut(s) 1335
TaqI TCGA 2 cut(s) 19, 91
TatI WGTACW 1 cut(s) 1267
TauI GCSGC 1 cut(s) 63
TfiI GAWTC 3 cut(s) 4, 55, 971
Tru1I TTAA 4 cut(s) 936, 1011, 1353, 1435
Tru9I TTAA 4 cut(s) 936, 1011, 1353, 1435
TscAI CASTG 1 cut(s) 1378
TseFI GTSAC 2 cut(s) 1088, 1373
TseI GCWGC 4 cut(s) 223, 430, 691, 1384
Tsp45I GTSAC 2 cut(s) 1088, 1373
TspGWI ACGGA 3 cut(s) 312, 519, 780
TspRI CASTG 1 cut(s) 1378
VpaK11BI GGWCC 3 cut(s) 245, 452, 713
XapI RAATTY 3 cut(s) 237, 444, 705
XceI RCATGY 3 cut(s) 319, 526, 787
XhoI CTCGAG 1 cut(s) 18
XmiI GTMKAC 2 cut(s) 91, 1200
XspI CTAG 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.