Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51710 AT1G51710 AT3G21280 AT3G21280 |
| fragaria_vesca | FvH4_6g32980 FvH4_6g32980 FvH4_6g32980 FvH4_6g32980 FvH4_6g32980 |
| malus_domestica | MD09G1195900.v1.1 MD17G1176500.v1.1 |
| prunus_persica | Prupe.3G052400_v2.0.a1 Prupe.3G052400_v2.0.a1 |
| pyrus_communis | pycom09g11300 pycom12494g00050 pycom17g18440 |
| rosa_chinensis | RchiOBHm_Chr2g0142531 |
| rosa_laevigata | RLG00000019963 |
| rosa_multiflora | Rmu_sc0007525.1_g000013 Rmu_sc0013104.1_g000001 Rmu_sc0040796.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00102550 |
| rosa_rugosa | Rorug02G0373600 Rorug02G0373700 Rorug02G0373800 Rorug02G0373800 |
| rosa_samantha | Rh2AG425000 Rh2BG434900 Rh2CG411600 Rh2DG444900 |
| rosa_wichuraiana | Rw2G034860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 344 |
| Acc16I | TGCGCA | 1 cut(s) | 536 |
| Acc36I | ACCTGC | 1 cut(s) | 344 |
| Acc65I | GGTACC | 3 cut(s) | 109, 572, 906 |
| AccB1I | GGYRCC | 4 cut(s) | 109, 508, 572, 906 |
| AccI | GTMKAC | 1 cut(s) | 173 |
| AciI | CCGC | 2 cut(s) | 973, 1423 |
| AclWI | GGATC | 5 cut(s) | 441, 1149, 1162, 1303, 1316 |
| AcoI | YGGCCR | 1 cut(s) | 1267 |
| AcsI | RAATTY | 2 cut(s) | 841, 1215 |
| AcuI | CTGAAG | 2 cut(s) | 615, 785 |
| AfaI | GTAC | 6 cut(s) | 111, 574, 908, 927, 1406, 1417 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 554, 854, 1342 |
| AgsI | TTSAA | 6 cut(s) | 40, 154, 385, 695, 1093, 1119 |
| AjnI | CCWGG | 1 cut(s) | 1280 |
| AluBI | AGCT | 8 cut(s) | 34, 44, 290, 392, 613, 738, 1046, 1110 |
| AluI | AGCT | 8 cut(s) | 34, 44, 290, 392, 613, 738, 1046, 1110 |
| Alw21I | GWGCWC | 3 cut(s) | 714, 740, 1112 |
| Alw26I | GTCTC | 2 cut(s) | 888, 1051 |
| Alw44I | GTGCAC | 1 cut(s) | 710 |
| AlwI | GGATC | 5 cut(s) | 441, 1149, 1162, 1303, 1316 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 671, 1060, 1265 |
| AoxI | GGCC | 5 cut(s) | 895, 960, 1267, 1389, 1410 |
| ApaLI | GTGCAC | 1 cut(s) | 710 |
| ApeKI | GCWGC | 1 cut(s) | 562 |
| ApoI | RAATTY | 2 cut(s) | 841, 1215 |
| Asp718I | GGTACC | 3 cut(s) | 109, 572, 906 |
| AspLEI | GCGC | 2 cut(s) | 537, 866 |
| AspS9I | GGNCC | 1 cut(s) | 1411 |
| AsuHPI | GGTGA | 3 cut(s) | 799, 1348, 1388 |
| BaeGI | GKGCMC | 1 cut(s) | 714 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 93, 126 |
| BalI | TGGCCA | 1 cut(s) | 1269 |
| BamHI | GGATCC | 2 cut(s) | 1154, 1308 |
| BanI | GGYRCC | 4 cut(s) | 109, 508, 572, 906 |
| BanII | GRGCYC | 2 cut(s) | 740, 1112 |
| BauI | CACGAG | 1 cut(s) | 465 |
| BbsI | GAAGAC | 1 cut(s) | 1356 |
| Bbv12I | GWGCWC | 3 cut(s) | 714, 740, 1112 |
| BbvI | GCAGC | 1 cut(s) | 574 |
| BccI | CCATC | 5 cut(s) | 185, 205, 520, 875, 1427 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 153, 187 |
| BciT130I | CCWGG | 1 cut(s) | 1282 |
| BclI | TGATCA | 1 cut(s) | 396 |
| BcoDI | GTCTC | 2 cut(s) | 888, 1051 |
| BfaI | CTAG | 2 cut(s) | 179, 654 |
| BfoI | RGCGCY | 1 cut(s) | 867 |
| BfuAI | ACCTGC | 1 cut(s) | 344 |
| BglII | AGATCT | 1 cut(s) | 268 |
| BisI | GCNGC | 1 cut(s) | 563 |
| BlsI | GCNGC | 1 cut(s) | 564 |
| Bme1390I | CCNGG | 1 cut(s) | 1282 |
| BmgT120I | GGNCC | 1 cut(s) | 1411 |
| BmiI | GGNNCC | 7 cut(s) | 111, 240, 510, 574, 908, 1156, 1310 |
| BmrFI | CCNGG | 1 cut(s) | 1282 |
| BmrI | ACTGGG | 1 cut(s) | 1092 |
| BmsI | GCATC | 2 cut(s) | 151, 580 |
| BmuI | ACTGGG | 1 cut(s) | 1092 |
| BpiI | GAAGAC | 1 cut(s) | 1356 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1142, 1174 |
| BpmI | CTGGAG | 2 cut(s) | 225, 1389 |
| BsaBI | GATNNNNATC | 2 cut(s) | 432, 1326 |
| BsaJI | CCNNGG | 3 cut(s) | 852, 902, 1281 |
| BsaWI | WCCGGW | 1 cut(s) | 647 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 554, 854, 1342 |
| Bse1I | ACTGG | 5 cut(s) | 173, 489, 837, 1098, 1216 |
| Bse3DI | GCAATG | 1 cut(s) | 430 |
| Bse8I | GATNNNNATC | 2 cut(s) | 432, 1326 |
| BseBI | CCWGG | 1 cut(s) | 1282 |
| BseDI | CCNNGG | 3 cut(s) | 852, 902, 1281 |
| BseGI | GGATG | 5 cut(s) | 163, 531, 595, 1072, 1419 |
| BseJI | GATNNNNATC | 2 cut(s) | 432, 1326 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 554, 854, 1342 |
| BseMI | GCAATG | 1 cut(s) | 430 |
| BseMII | CTCAG | 3 cut(s) | 77, 753, 1052 |
| BseNI | ACTGG | 5 cut(s) | 173, 489, 837, 1098, 1216 |
| BseRI | GAGGAG | 2 cut(s) | 1038, 1386 |
| BseSI | GKGCMC | 1 cut(s) | 714 |
| BseXI | GCAGC | 1 cut(s) | 574 |
| BsgI | GTGCAG | 1 cut(s) | 1278 |
| BshFI | GGCC | 5 cut(s) | 897, 962, 1269, 1391, 1412 |
| BshNI | GGYRCC | 4 cut(s) | 109, 508, 572, 906 |
| BsiHKAI | GWGCWC | 3 cut(s) | 714, 740, 1112 |
| BsiSI | CCGG | 1 cut(s) | 648 |
| BslFI | GGGAC | 1 cut(s) | 229 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 554, 854, 1342 |
| BsmAI | GTCTC | 2 cut(s) | 888, 1051 |
| BsmFI | GGGAC | 1 cut(s) | 229 |
| BsmI | GAATGC | 1 cut(s) | 367 |
| BsnI | GGCC | 5 cut(s) | 897, 962, 1269, 1391, 1412 |
| Bsp1286I | GDGCHC | 3 cut(s) | 714, 740, 1112 |
| Bsp1407I | TGTACA | 1 cut(s) | 1404 |
| Bsp143I | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| BspACI | CCGC | 2 cut(s) | 973, 1423 |
| BspANI | GGCC | 5 cut(s) | 897, 962, 1269, 1391, 1412 |
| BspCNI | CTCAG | 3 cut(s) | 76, 752, 1053 |
| BspLI | GGNNCC | 7 cut(s) | 111, 240, 510, 574, 908, 1156, 1310 |
| BspMI | ACCTGC | 1 cut(s) | 344 |
| BspPI | GGATC | 5 cut(s) | 441, 1149, 1162, 1303, 1316 |
| BspQI | GCTCTTC | 1 cut(s) | 297 |
| BspT107I | GGYRCC | 4 cut(s) | 109, 508, 572, 906 |
| BsrDI | GCAATG | 1 cut(s) | 430 |
| BsrGI | TGTACA | 1 cut(s) | 1404 |
| BsrI | ACTGG | 5 cut(s) | 173, 489, 837, 1098, 1216 |
| BssECI | CCNNGG | 3 cut(s) | 852, 902, 1281 |
| BssMI | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| BssSI | CACGAG | 1 cut(s) | 465 |
| BssT1I | CCWWGG | 2 cut(s) | 852, 902 |
| Bst2BI | CACGAG | 1 cut(s) | 465 |
| Bst2UI | CCWGG | 1 cut(s) | 1282 |
| Bst6I | CTCTTC | 3 cut(s) | 297, 726, 935 |
| BstAUI | TGTACA | 1 cut(s) | 1404 |
| BstDEI | CTNAG | 4 cut(s) | 63, 638, 739, 1061 |
| BstF5I | GGATG | 5 cut(s) | 163, 531, 595, 1072, 1419 |
| BstH2I | RGCGCY | 1 cut(s) | 867 |
| BstHHI | GCGC | 2 cut(s) | 537, 866 |
| BstKTI | GATC | 8 cut(s) | 271, 399, 436, 644, 1012, 1027, 1157, 1311 |
| BstMAI | GTCTC | 2 cut(s) | 888, 1051 |
| BstMBI | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 31 |
| BstNI | CCWGG | 1 cut(s) | 1282 |
| BstNSI | RCATGY | 1 cut(s) | 1429 |
| BstSCI | CCNGG | 1 cut(s) | 1280 |
| BstSLI | GKGCMC | 1 cut(s) | 714 |
| BstV1I | GCAGC | 1 cut(s) | 574 |
| BstV2I | GAAGAC | 1 cut(s) | 1356 |
| BstX2I | RGATCY | 3 cut(s) | 268, 1154, 1308 |
| BstYI | RGATCY | 3 cut(s) | 268, 1154, 1308 |
| BsuRI | GGCC | 5 cut(s) | 897, 962, 1269, 1391, 1412 |
| BtsCI | GGATG | 5 cut(s) | 163, 531, 595, 1072, 1419 |
| BtsI | GCAGTG | 1 cut(s) | 712 |
| BtsIMutI | CAGTG | 2 cut(s) | 712, 1105 |
| BveI | ACCTGC | 1 cut(s) | 344 |
| CaiI | CAGNNNCTG | 3 cut(s) | 671, 1060, 1265 |
| CfoI | GCGC | 2 cut(s) | 537, 866 |
| Cfr13I | GGNCC | 1 cut(s) | 1411 |
| Csp6I | GTAC | 6 cut(s) | 110, 573, 907, 926, 1405, 1416 |
| CviAII | CATG | 6 cut(s) | 514, 580, 782, 800, 815, 1426 |
| CviQI | GTAC | 6 cut(s) | 110, 573, 907, 926, 1405, 1416 |
| DdeI | CTNAG | 4 cut(s) | 63, 638, 739, 1061 |
| DpnI | GATC | 8 cut(s) | 270, 398, 435, 643, 1011, 1026, 1156, 1310 |
| DpnII | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| DraI | TTTAAA | 2 cut(s) | 82, 822 |
| EaeI | YGGCCR | 1 cut(s) | 1267 |
| Eam1104I | CTCTTC | 3 cut(s) | 297, 726, 935 |
| EarI | CTCTTC | 3 cut(s) | 297, 726, 935 |
| Ecl136II | GAGCTC | 2 cut(s) | 738, 1110 |
| Eco130I | CCWWGG | 2 cut(s) | 852, 902 |
| Eco24I | GRGCYC | 2 cut(s) | 740, 1112 |
| Eco32I | GATATC | 1 cut(s) | 1132 |
| Eco53kI | GAGCTC | 2 cut(s) | 738, 1110 |
| Eco57I | CTGAAG | 2 cut(s) | 615, 785 |
| EcoICRI | GAGCTC | 2 cut(s) | 738, 1110 |
| EcoRII | CCWGG | 1 cut(s) | 1280 |
| EcoRV | GATATC | 1 cut(s) | 1132 |
| EcoT14I | CCWWGG | 2 cut(s) | 852, 902 |
| EcoT38I | GRGCYC | 2 cut(s) | 740, 1112 |
| ErhI | CCWWGG | 2 cut(s) | 852, 902 |
| FaeI | CATG | 6 cut(s) | 517, 583, 785, 803, 818, 1429 |
| FaqI | GGGAC | 1 cut(s) | 229 |
| FatI | CATG | 6 cut(s) | 513, 579, 781, 799, 814, 1425 |
| FauNDI | CATATG | 2 cut(s) | 447, 1386 |
| FbaI | TGATCA | 1 cut(s) | 396 |
| FblI | GTMKAC | 1 cut(s) | 173 |
| Fnu4HI | GCNGC | 1 cut(s) | 563 |
| FokI | GGATG | 5 cut(s) | 170, 538, 602, 1079, 1406 |
| FriOI | GRGCYC | 2 cut(s) | 740, 1112 |
| Fsp4HI | GCNGC | 1 cut(s) | 563 |
| FspBI | CTAG | 2 cut(s) | 179, 654 |
| FspI | TGCGCA | 1 cut(s) | 536 |
| GlaI | GCGC | 2 cut(s) | 536, 865 |
| GluI | GCNGC | 1 cut(s) | 563 |
| GsuI | CTGGAG | 2 cut(s) | 225, 1389 |
| HaeII | RGCGCY | 1 cut(s) | 867 |
| HaeIII | GGCC | 5 cut(s) | 897, 962, 1269, 1391, 1412 |
| HapII | CCGG | 1 cut(s) | 648 |
| HhaI | GCGC | 2 cut(s) | 537, 866 |
| Hin1II | CATG | 6 cut(s) | 517, 583, 785, 803, 818, 1429 |
| Hin6I | GCGC | 2 cut(s) | 535, 864 |
| HinP1I | GCGC | 2 cut(s) | 535, 864 |
| HincII | GTYRAC | 2 cut(s) | 174, 453 |
| HindII | GTYRAC | 2 cut(s) | 174, 453 |
| HinfI | GANTC | 8 cut(s) | 175, 668, 749, 881, 947, 1115, 1175, 1262 |
| HpaII | CCGG | 1 cut(s) | 648 |
| HphI | GGTGA | 3 cut(s) | 799, 1348, 1388 |
| Hpy166II | GTNNAC | 5 cut(s) | 174, 453, 482, 712, 790 |
| Hpy188III | TCNNGA | 7 cut(s) | 116, 242, 377, 665, 937, 1135, 1368 |
| Hpy8I | GTNNAC | 5 cut(s) | 174, 453, 482, 712, 790 |
| HpyCH4IV | ACGT | 2 cut(s) | 9, 928 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 31 |
| HpyF3I | CTNAG | 4 cut(s) | 63, 638, 739, 1061 |
| HpySE526I | ACGT | 2 cut(s) | 9, 928 |
| Hsp92II | CATG | 6 cut(s) | 517, 583, 785, 803, 818, 1429 |
| HspAI | GCGC | 2 cut(s) | 535, 864 |
| KpnI | GGTACC | 3 cut(s) | 113, 576, 910 |
| Ksp22I | TGATCA | 1 cut(s) | 396 |
| Kzo9I | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| LguI | GCTCTTC | 1 cut(s) | 297 |
| LmnI | GCTCC | 3 cut(s) | 31, 244, 1051 |
| Lsp1109I | GCAGC | 1 cut(s) | 574 |
| LweI | GCATC | 2 cut(s) | 151, 580 |
| MaeI | CTAG | 2 cut(s) | 179, 654 |
| MaeII | ACGT | 2 cut(s) | 9, 928 |
| MaeIII | GTNAC | 1 cut(s) | 606 |
| MalI | GATC | 8 cut(s) | 270, 398, 435, 643, 1011, 1026, 1156, 1310 |
| MboI | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| MfeI | CAATTG | 1 cut(s) | 995 |
| MflI | RGATCY | 3 cut(s) | 268, 1154, 1308 |
| MhlI | GDGCHC | 3 cut(s) | 714, 740, 1112 |
| MlsI | TGGCCA | 1 cut(s) | 1269 |
| MluCI | AATT | 8 cut(s) | 51, 200, 518, 551, 690, 841, 995, 1215 |
| MluNI | TGGCCA | 1 cut(s) | 1269 |
| MlyI | GAGTC | 5 cut(s) | 169, 662, 758, 890, 1256 |
| Mox20I | TGGCCA | 1 cut(s) | 1269 |
| MscI | TGGCCA | 1 cut(s) | 1269 |
| MseI | TTAA | 8 cut(s) | 6, 81, 101, 138, 321, 675, 809, 821 |
| MslI | CAYNNNNRTG | 2 cut(s) | 798, 1424 |
| Msp20I | TGGCCA | 1 cut(s) | 1269 |
| MspI | CCGG | 1 cut(s) | 648 |
| MspR9I | CCNGG | 1 cut(s) | 1282 |
| MunI | CAATTG | 1 cut(s) | 995 |
| Mva1269I | GAATGC | 1 cut(s) | 367 |
| MvaI | CCWGG | 1 cut(s) | 1282 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 31 |
| NdeI | CATATG | 2 cut(s) | 447, 1386 |
| NdeII | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| NlaIII | CATG | 6 cut(s) | 517, 583, 785, 803, 818, 1429 |
| NlaIV | GGNNCC | 7 cut(s) | 111, 240, 510, 574, 908, 1156, 1310 |
| NmuCI | GTSAC | 1 cut(s) | 606 |
| NsbI | TGCGCA | 1 cut(s) | 536 |
| NspI | RCATGY | 1 cut(s) | 1429 |
| PaqCI | CACCTGC | 1 cut(s) | 344 |
| PciSI | GCTCTTC | 1 cut(s) | 297 |
| PctI | GAATGC | 1 cut(s) | 367 |
| PfeI | GAWTC | 3 cut(s) | 947, 1115, 1175 |
| PkrI | GCNGC | 1 cut(s) | 564 |
| PleI | GAGTC | 5 cut(s) | 169, 662, 757, 889, 1256 |
| PpsI | GAGTC | 5 cut(s) | 169, 662, 757, 889, 1256 |
| Psp124BI | GAGCTC | 2 cut(s) | 740, 1112 |
| Psp6I | CCWGG | 1 cut(s) | 1280 |
| PspGI | CCWGG | 1 cut(s) | 1280 |
| PspN4I | GGNNCC | 7 cut(s) | 111, 240, 510, 574, 908, 1156, 1310 |
| PspPI | GGNCC | 1 cut(s) | 1411 |
| PstNI | CAGNNNCTG | 3 cut(s) | 671, 1060, 1265 |
| PsuI | RGATCY | 3 cut(s) | 268, 1154, 1308 |
| RsaI | GTAC | 6 cut(s) | 111, 574, 908, 927, 1406, 1417 |
| RsaNI | GTAC | 6 cut(s) | 110, 573, 907, 926, 1405, 1416 |
| RseI | CAYNNNNRTG | 2 cut(s) | 798, 1424 |
| SacI | GAGCTC | 2 cut(s) | 740, 1112 |
| SalI | GTCGAC | 1 cut(s) | 172 |
| SapI | GCTCTTC | 1 cut(s) | 297 |
| SaqAI | TTAA | 8 cut(s) | 6, 81, 101, 138, 321, 675, 809, 821 |
| SatI | GCNGC | 1 cut(s) | 563 |
| Sau3AI | GATC | 8 cut(s) | 268, 396, 433, 641, 1009, 1024, 1154, 1308 |
| Sau96I | GGNCC | 1 cut(s) | 1411 |
| SchI | GAGTC | 5 cut(s) | 169, 662, 758, 890, 1256 |
| ScrFI | CCNGG | 1 cut(s) | 1282 |
| SduI | GDGCHC | 3 cut(s) | 714, 740, 1112 |
| SfaNI | GCATC | 2 cut(s) | 151, 580 |
| SmiI | ATTTAAAT | 1 cut(s) | 82 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 798, 1424 |
| Sse9I | AATT | 8 cut(s) | 51, 200, 518, 551, 690, 841, 995, 1215 |
| SsiI | CCGC | 2 cut(s) | 973, 1423 |
| SspMI | CTAG | 2 cut(s) | 179, 654 |
| SstI | GAGCTC | 2 cut(s) | 740, 1112 |
| StyD4I | CCNGG | 1 cut(s) | 1280 |
| StyI | CCWWGG | 2 cut(s) | 852, 902 |
| SwaI | ATTTAAAT | 1 cut(s) | 82 |
| TaiI | ACGT | 2 cut(s) | 12, 931 |
| TaqI | TCGA | 3 cut(s) | 173, 981, 1134 |
| TasI | AATT | 8 cut(s) | 51, 200, 518, 551, 690, 841, 995, 1215 |
| TatI | WGTACW | 1 cut(s) | 1404 |
| TfiI | GAWTC | 3 cut(s) | 947, 1115, 1175 |
| Tru1I | TTAA | 8 cut(s) | 6, 81, 101, 138, 321, 675, 809, 821 |
| Tru9I | TTAA | 8 cut(s) | 6, 81, 101, 138, 321, 675, 809, 821 |
| TscAI | CASTG | 2 cut(s) | 719, 1105 |
| TseFI | GTSAC | 1 cut(s) | 606 |
| TseI | GCWGC | 1 cut(s) | 562 |
| Tsp45I | GTSAC | 1 cut(s) | 606 |
| TspDTI | ATGAA | 4 cut(s) | 359, 568, 816, 1212 |
| TspRI | CASTG | 2 cut(s) | 719, 1105 |
| VneI | GTGCAC | 1 cut(s) | 710 |
| XapI | RAATTY | 2 cut(s) | 841, 1215 |
| XceI | RCATGY | 1 cut(s) | 1429 |
| XmiI | GTMKAC | 1 cut(s) | 173 |
| XspI | CTAG | 2 cut(s) | 179, 654 |