Ubiquitin carboxyl-terminal hydrolase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G51710 AT1G51710 AT3G21280 AT3G21280 |
| fragaria_vesca | FvH4_6g32980 FvH4_6g32980 FvH4_6g32980 FvH4_6g32980 FvH4_6g32980 |
| malus_domestica | MD09G1195900.v1.1 MD17G1176500.v1.1 |
| prunus_persica | Prupe.3G052400_v2.0.a1 Prupe.3G052400_v2.0.a1 |
| pyrus_communis | pycom09g11300 pycom12494g00050 pycom17g18440 |
| rosa_chinensis | RchiOBHm_Chr2g0142531 |
| rosa_laevigata | RLG00000019963 |
| rosa_multiflora | Rmu_sc0007525.1_g000013 Rmu_sc0013104.1_g000001 Rmu_sc0040796.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00102550 |
| rosa_rugosa | Rorug02G0373600 Rorug02G0373700 Rorug02G0373800 Rorug02G0373800 |
| rosa_samantha | Rh2AG425000 Rh2BG434900 Rh2CG411600 Rh2DG444900 |
| rosa_wichuraiana | Rw2G034860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1196 |
| Acc36I | ACCTGC | 1 cut(s) | 1196 |
| Acc65I | GGTACC | 1 cut(s) | 109 |
| AccB1I | GGYRCC | 3 cut(s) | 109, 508, 1208 |
| AccI | GTMKAC | 1 cut(s) | 173 |
| AciI | CCGC | 2 cut(s) | 973, 1348 |
| AclWI | GGATC | 4 cut(s) | 441, 1149, 1162, 1322 |
| AcsI | RAATTY | 2 cut(s) | 841, 1221 |
| AcuI | CTGAAG | 3 cut(s) | 297, 615, 896 |
| AfaI | GTAC | 6 cut(s) | 111, 357, 620, 908, 1412, 1423 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 248, 554, 854, 1348 |
| AgsI | TTSAA | 6 cut(s) | 82, 154, 385, 695, 1093, 1119 |
| AjnI | CCWGG | 1 cut(s) | 1286 |
| AluBI | AGCT | 9 cut(s) | 44, 290, 392, 562, 613, 738, 1046, 1110, 1202 |
| AluI | AGCT | 9 cut(s) | 44, 290, 392, 562, 613, 738, 1046, 1110, 1202 |
| Alw21I | GWGCWC | 2 cut(s) | 714, 1112 |
| Alw26I | GTCTC | 2 cut(s) | 639, 888 |
| Alw44I | GTGCAC | 1 cut(s) | 710 |
| AlwI | GGATC | 4 cut(s) | 441, 1149, 1162, 1322 |
| AoxI | GGCC | 6 cut(s) | 678, 895, 960, 1273, 1395, 1416 |
| ApaLI | GTGCAC | 1 cut(s) | 710 |
| ApeKI | GCWGC | 3 cut(s) | 562, 610, 1202 |
| ApoI | RAATTY | 2 cut(s) | 841, 1221 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 598, 630 |
| Asp718I | GGTACC | 1 cut(s) | 109 |
| AspS9I | GGNCC | 3 cut(s) | 251, 679, 1417 |
| AsuC2I | CCSGG | 1 cut(s) | 106 |
| AsuHPI | GGTGA | 4 cut(s) | 491, 799, 1354, 1394 |
| AvaII | GGWCC | 1 cut(s) | 251 |
| BaeGI | GKGCMC | 1 cut(s) | 714 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 93, 126 |
| BamHI | GGATCC | 1 cut(s) | 1154 |
| BanI | GGYRCC | 3 cut(s) | 109, 508, 1208 |
| BanII | GRGCYC | 1 cut(s) | 1112 |
| BauI | CACGAG | 1 cut(s) | 465 |
| BbsI | GAAGAC | 1 cut(s) | 1362 |
| Bbv12I | GWGCWC | 2 cut(s) | 714, 1112 |
| BbvI | GCAGC | 3 cut(s) | 549, 622, 1189 |
| BccI | CCATC | 3 cut(s) | 205, 520, 1346 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 153, 187, 1184, 1218 |
| BciT130I | CCWGG | 1 cut(s) | 1288 |
| BciVI | GTATCC | 1 cut(s) | 555 |
| BclI | TGATCA | 1 cut(s) | 396 |
| BcnI | CCSGG | 1 cut(s) | 106 |
| BcoDI | GTCTC | 2 cut(s) | 639, 888 |
| BfaI | CTAG | 1 cut(s) | 654 |
| BfmI | CTRYAG | 1 cut(s) | 1203 |
| BfuAI | ACCTGC | 1 cut(s) | 1196 |
| BfuI | GTATCC | 1 cut(s) | 555 |
| BglII | AGATCT | 1 cut(s) | 268 |
| BisI | GCNGC | 3 cut(s) | 563, 611, 1203 |
| BlsI | GCNGC | 3 cut(s) | 564, 612, 1204 |
| Bme1390I | CCNGG | 2 cut(s) | 106, 1288 |
| Bme18I | GGWCC | 1 cut(s) | 251 |
| BmgT120I | GGNCC | 3 cut(s) | 251, 679, 1417 |
| BmiI | GGNNCC | 6 cut(s) | 111, 240, 252, 510, 1156, 1210 |
| BmrFI | CCNGG | 2 cut(s) | 106, 1288 |
| BmsI | GCATC | 3 cut(s) | 151, 580, 1187 |
| BpiI | GAAGAC | 1 cut(s) | 1362 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1142, 1174 |
| BpmI | CTGGAG | 2 cut(s) | 225, 1395 |
| BpuMI | CCSGG | 1 cut(s) | 106 |
| BsaBI | GATNNNNATC | 2 cut(s) | 432, 1332 |
| BsaJI | CCNNGG | 3 cut(s) | 105, 902, 1287 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 248, 554, 854, 1348 |
| Bse1I | ACTGG | 2 cut(s) | 489, 1222 |
| Bse3DI | GCAATG | 1 cut(s) | 430 |
| Bse8I | GATNNNNATC | 2 cut(s) | 432, 1332 |
| BseBI | CCWGG | 1 cut(s) | 1288 |
| BseDI | CCNNGG | 3 cut(s) | 105, 902, 1287 |
| BseGI | GGATG | 4 cut(s) | 163, 531, 595, 1338 |
| BseJI | GATNNNNATC | 2 cut(s) | 432, 1332 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 248, 554, 854, 1348 |
| BseMI | GCAATG | 1 cut(s) | 430 |
| BseMII | CTCAG | 4 cut(s) | 77, 644, 1052, 1284 |
| BseNI | ACTGG | 2 cut(s) | 489, 1222 |
| BseRI | GAGGAG | 2 cut(s) | 1038, 1392 |
| BseSI | GKGCMC | 1 cut(s) | 714 |
| BseXI | GCAGC | 3 cut(s) | 549, 622, 1189 |
| BshFI | GGCC | 6 cut(s) | 680, 897, 962, 1275, 1397, 1418 |
| BshNI | GGYRCC | 3 cut(s) | 109, 508, 1208 |
| BsiHKAI | GWGCWC | 2 cut(s) | 714, 1112 |
| BsiSI | CCGG | 2 cut(s) | 105, 1054 |
| BslFI | GGGAC | 2 cut(s) | 229, 1412 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 248, 554, 854, 1348 |
| BsmAI | GTCTC | 2 cut(s) | 639, 888 |
| BsmFI | GGGAC | 2 cut(s) | 229, 1412 |
| BsmI | GAATGC | 1 cut(s) | 367 |
| BsnI | GGCC | 6 cut(s) | 680, 897, 962, 1275, 1397, 1418 |
| Bsp1286I | GDGCHC | 2 cut(s) | 714, 1112 |
| Bsp1407I | TGTACA | 2 cut(s) | 618, 1410 |
| Bsp143I | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| BspACI | CCGC | 2 cut(s) | 973, 1348 |
| BspANI | GGCC | 6 cut(s) | 680, 897, 962, 1275, 1397, 1418 |
| BspCNI | CTCAG | 4 cut(s) | 76, 643, 1053, 1283 |
| BspLI | GGNNCC | 6 cut(s) | 111, 240, 252, 510, 1156, 1210 |
| BspMAI | CTGCAG | 1 cut(s) | 1207 |
| BspMI | ACCTGC | 1 cut(s) | 1196 |
| BspPI | GGATC | 4 cut(s) | 441, 1149, 1162, 1322 |
| BspT107I | GGYRCC | 3 cut(s) | 109, 508, 1208 |
| BsrDI | GCAATG | 1 cut(s) | 430 |
| BsrGI | TGTACA | 2 cut(s) | 618, 1410 |
| BsrI | ACTGG | 2 cut(s) | 489, 1222 |
| BssECI | CCNNGG | 3 cut(s) | 105, 902, 1287 |
| BssMI | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| BssSI | CACGAG | 1 cut(s) | 465 |
| BssT1I | CCWWGG | 1 cut(s) | 902 |
| Bst2BI | CACGAG | 1 cut(s) | 465 |
| Bst2UI | CCWGG | 1 cut(s) | 1288 |
| Bst4CI | ACNGT | 4 cut(s) | 10, 355, 673, 1426 |
| Bst6I | CTCTTC | 1 cut(s) | 935 |
| BstAUI | TGTACA | 2 cut(s) | 618, 1410 |
| BstDEI | CTNAG | 5 cut(s) | 63, 630, 638, 1061, 1270 |
| BstF5I | GGATG | 4 cut(s) | 163, 531, 595, 1338 |
| BstKTI | GATC | 9 cut(s) | 271, 399, 436, 644, 870, 1012, 1027, 1157, 1317 |
| BstMAI | GTCTC | 2 cut(s) | 639, 888 |
| BstMBI | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1208 |
| BstNI | CCWGG | 1 cut(s) | 1288 |
| BstNSI | RCATGY | 2 cut(s) | 818, 1411 |
| BstSCI | CCNGG | 2 cut(s) | 104, 1286 |
| BstSFI | CTRYAG | 1 cut(s) | 1203 |
| BstSLI | GKGCMC | 1 cut(s) | 714 |
| BstV1I | GCAGC | 3 cut(s) | 549, 622, 1189 |
| BstV2I | GAAGAC | 1 cut(s) | 1362 |
| BstX2I | RGATCY | 2 cut(s) | 268, 1154 |
| BstYI | RGATCY | 2 cut(s) | 268, 1154 |
| BsuI | GTATCC | 1 cut(s) | 555 |
| BsuRI | GGCC | 6 cut(s) | 680, 897, 962, 1275, 1397, 1418 |
| BtsCI | GGATG | 4 cut(s) | 163, 531, 595, 1338 |
| BtsI | GCAGTG | 1 cut(s) | 712 |
| BtsIMutI | CAGTG | 2 cut(s) | 712, 759 |
| BveI | ACCTGC | 1 cut(s) | 1196 |
| Cfr13I | GGNCC | 3 cut(s) | 251, 679, 1417 |
| CseI | GACGC | 1 cut(s) | 616 |
| Csp6I | GTAC | 6 cut(s) | 110, 356, 619, 907, 1411, 1422 |
| CviAII | CATG | 6 cut(s) | 514, 580, 782, 815, 1213, 1408 |
| CviQI | GTAC | 6 cut(s) | 110, 356, 619, 907, 1411, 1422 |
| DdeI | CTNAG | 5 cut(s) | 63, 630, 638, 1061, 1270 |
| DpnI | GATC | 9 cut(s) | 270, 398, 435, 643, 869, 1011, 1026, 1156, 1316 |
| DpnII | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| DraI | TTTAAA | 2 cut(s) | 40, 822 |
| Eam1104I | CTCTTC | 1 cut(s) | 935 |
| EarI | CTCTTC | 1 cut(s) | 935 |
| Ecl136II | GAGCTC | 1 cut(s) | 1110 |
| Eco130I | CCWWGG | 1 cut(s) | 902 |
| Eco24I | GRGCYC | 1 cut(s) | 1112 |
| Eco32I | GATATC | 1 cut(s) | 1132 |
| Eco47I | GGWCC | 1 cut(s) | 251 |
| Eco53kI | GAGCTC | 1 cut(s) | 1110 |
| Eco57I | CTGAAG | 3 cut(s) | 297, 615, 896 |
| EcoICRI | GAGCTC | 1 cut(s) | 1110 |
| EcoO109I | RGGNCCY | 2 cut(s) | 251, 679 |
| EcoRII | CCWGG | 1 cut(s) | 1286 |
| EcoRV | GATATC | 1 cut(s) | 1132 |
| EcoT14I | CCWWGG | 1 cut(s) | 902 |
| EcoT38I | GRGCYC | 1 cut(s) | 1112 |
| ErhI | CCWWGG | 1 cut(s) | 902 |
| FaeI | CATG | 6 cut(s) | 517, 583, 785, 818, 1216, 1411 |
| FaqI | GGGAC | 2 cut(s) | 229, 1412 |
| FatI | CATG | 6 cut(s) | 513, 579, 781, 814, 1212, 1407 |
| FauI | CCCGC | 1 cut(s) | 1341 |
| FauNDI | CATATG | 2 cut(s) | 447, 1392 |
| FbaI | TGATCA | 1 cut(s) | 396 |
| FblI | GTMKAC | 1 cut(s) | 173 |
| Fnu4HI | GCNGC | 3 cut(s) | 563, 611, 1203 |
| FokI | GGATG | 4 cut(s) | 170, 538, 602, 1325 |
| FriOI | GRGCYC | 1 cut(s) | 1112 |
| Fsp4HI | GCNGC | 3 cut(s) | 563, 611, 1203 |
| FspBI | CTAG | 1 cut(s) | 654 |
| GluI | GCNGC | 3 cut(s) | 563, 611, 1203 |
| GsuI | CTGGAG | 2 cut(s) | 225, 1395 |
| HaeIII | GGCC | 6 cut(s) | 680, 897, 962, 1275, 1397, 1418 |
| HapII | CCGG | 2 cut(s) | 105, 1054 |
| HgaI | GACGC | 1 cut(s) | 616 |
| Hin1II | CATG | 6 cut(s) | 517, 583, 785, 818, 1216, 1411 |
| HincII | GTYRAC | 2 cut(s) | 174, 453 |
| HindII | GTYRAC | 2 cut(s) | 174, 453 |
| HinfI | GANTC | 5 cut(s) | 749, 881, 947, 1057, 1268 |
| HpaII | CCGG | 2 cut(s) | 105, 1054 |
| HphI | GGTGA | 4 cut(s) | 491, 799, 1354, 1394 |
| Hpy166II | GTNNAC | 6 cut(s) | 174, 453, 482, 621, 712, 790 |
| Hpy188I | TCNGA | 7 cut(s) | 438, 742, 829, 957, 1021, 1062, 1144 |
| Hpy188III | TCNNGA | 9 cut(s) | 116, 242, 377, 414, 467, 665, 937, 1135, 1374 |
| Hpy8I | GTNNAC | 6 cut(s) | 174, 453, 482, 621, 712, 790 |
| HpyAV | CCTTC | 9 cut(s) | 148, 241, 586, 797, 858, 871, 908, 952, 1067 |
| HpyCH4III | ACNGT | 4 cut(s) | 10, 355, 673, 1426 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1208 |
| HpyF3I | CTNAG | 5 cut(s) | 63, 630, 638, 1061, 1270 |
| Hsp92II | CATG | 6 cut(s) | 517, 583, 785, 818, 1216, 1411 |
| KpnI | GGTACC | 1 cut(s) | 113 |
| Ksp22I | TGATCA | 1 cut(s) | 396 |
| Kzo9I | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| LmnI | GCTCC | 2 cut(s) | 244, 1051 |
| Lsp1109I | GCAGC | 3 cut(s) | 549, 622, 1189 |
| LweI | GCATC | 3 cut(s) | 151, 580, 1187 |
| MaeI | CTAG | 1 cut(s) | 654 |
| MalI | GATC | 9 cut(s) | 270, 398, 435, 643, 869, 1011, 1026, 1156, 1316 |
| MboI | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| MfeI | CAATTG | 1 cut(s) | 995 |
| MflI | RGATCY | 2 cut(s) | 268, 1154 |
| MhlI | GDGCHC | 2 cut(s) | 714, 1112 |
| MlyI | GAGTC | 3 cut(s) | 890, 1051, 1262 |
| MmeI | TCCRAC | 1 cut(s) | 584 |
| MseI | TTAA | 9 cut(s) | 39, 101, 138, 294, 321, 675, 765, 809, 821 |
| MspA1I | CMGCKG | 2 cut(s) | 562, 1348 |
| MspI | CCGG | 2 cut(s) | 105, 1054 |
| MspR9I | CCNGG | 2 cut(s) | 106, 1288 |
| MunI | CAATTG | 1 cut(s) | 995 |
| Mva1269I | GAATGC | 1 cut(s) | 367 |
| MvaI | CCWGG | 1 cut(s) | 1288 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1208 |
| NciI | CCSGG | 1 cut(s) | 106 |
| NdeI | CATATG | 2 cut(s) | 447, 1392 |
| NdeII | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| NlaIII | CATG | 6 cut(s) | 517, 583, 785, 818, 1216, 1411 |
| NlaIV | GGNNCC | 6 cut(s) | 111, 240, 252, 510, 1156, 1210 |
| NspI | RCATGY | 2 cut(s) | 818, 1411 |
| PaqCI | CACCTGC | 1 cut(s) | 1196 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1323 |
| PctI | GAATGC | 1 cut(s) | 367 |
| PfeI | GAWTC | 2 cut(s) | 749, 947 |
| PkrI | GCNGC | 3 cut(s) | 564, 612, 1204 |
| PleI | GAGTC | 3 cut(s) | 889, 1051, 1262 |
| PpsI | GAGTC | 3 cut(s) | 889, 1051, 1262 |
| PpuMI | RGGWCCY | 1 cut(s) | 251 |
| Psp124BI | GAGCTC | 1 cut(s) | 1112 |
| Psp5II | RGGWCCY | 1 cut(s) | 251 |
| Psp6I | CCWGG | 1 cut(s) | 1286 |
| PspGI | CCWGG | 1 cut(s) | 1286 |
| PspN4I | GGNNCC | 6 cut(s) | 111, 240, 252, 510, 1156, 1210 |
| PspPI | GGNCC | 3 cut(s) | 251, 679, 1417 |
| PspPPI | RGGWCCY | 1 cut(s) | 251 |
| PstI | CTGCAG | 1 cut(s) | 1207 |
| PsuI | RGATCY | 2 cut(s) | 268, 1154 |
| PvuII | CAGCTG | 1 cut(s) | 562 |
| RsaI | GTAC | 6 cut(s) | 111, 357, 620, 908, 1412, 1423 |
| RsaNI | GTAC | 6 cut(s) | 110, 356, 619, 907, 1411, 1422 |
| SacI | GAGCTC | 1 cut(s) | 1112 |
| SalI | GTCGAC | 1 cut(s) | 172 |
| SaqAI | TTAA | 9 cut(s) | 39, 101, 138, 294, 321, 675, 765, 809, 821 |
| SatI | GCNGC | 3 cut(s) | 563, 611, 1203 |
| Sau3AI | GATC | 9 cut(s) | 268, 396, 433, 641, 867, 1009, 1024, 1154, 1314 |
| Sau96I | GGNCC | 3 cut(s) | 251, 679, 1417 |
| SchI | GAGTC | 3 cut(s) | 890, 1051, 1262 |
| ScrFI | CCNGG | 2 cut(s) | 106, 1288 |
| SduI | GDGCHC | 2 cut(s) | 714, 1112 |
| SfaNI | GCATC | 3 cut(s) | 151, 580, 1187 |
| SfcI | CTRYAG | 1 cut(s) | 1203 |
| SinI | GGWCC | 1 cut(s) | 251 |
| SsiI | CCGC | 2 cut(s) | 973, 1348 |
| SspMI | CTAG | 1 cut(s) | 654 |
| SstI | GAGCTC | 1 cut(s) | 1112 |
| StyD4I | CCNGG | 2 cut(s) | 104, 1286 |
| StyI | CCWWGG | 1 cut(s) | 902 |
| TaaI | ACNGT | 4 cut(s) | 10, 355, 673, 1426 |
| TaqI | TCGA | 2 cut(s) | 173, 1317 |
| TatI | WGTACW | 2 cut(s) | 618, 1410 |
| TfiI | GAWTC | 2 cut(s) | 749, 947 |
| Tru1I | TTAA | 9 cut(s) | 39, 101, 138, 294, 321, 675, 765, 809, 821 |
| Tru9I | TTAA | 9 cut(s) | 39, 101, 138, 294, 321, 675, 765, 809, 821 |
| TscAI | CASTG | 2 cut(s) | 719, 759 |
| TseI | GCWGC | 3 cut(s) | 562, 610, 1202 |
| TspDTI | ATGAA | 4 cut(s) | 359, 568, 1116, 1212 |
| TspGWI | ACGGA | 1 cut(s) | 917 |
| TspRI | CASTG | 2 cut(s) | 719, 759 |
| VneI | GTGCAC | 1 cut(s) | 710 |
| VpaK11BI | GGWCC | 1 cut(s) | 251 |
| XapI | RAATTY | 2 cut(s) | 841, 1221 |
| XceI | RCATGY | 2 cut(s) | 818, 1411 |
| XmiI | GTMKAC | 1 cut(s) | 173 |
| XspI | CTAG | 1 cut(s) | 654 |