Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0006200

Physical Location & Seq

Genomic Coordinates Forward (+)

36177211 .. 36179338

Gene Structure 2128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1284000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1518 bp

ATGAATCTGAACCGTTCGATATCCACCGGAACGTGGCTGGTGAGGAAGCTTTGTACGGCAGTTGAGGCTGCGACGGCCGCGAAAACGGGTCAGCCTGGAAATCCCAATAGGCTGTATCGGAGGTTATCGGCTTTGGGAGCGACGGGAGAAAGCGTGGCCAAGACGTTAAACCAGTACGTTATGGAGGGCAAAATGGTCAGGAAGTTTGAGCTCGAGAAATGCATCAAGGAGCTCCGCAAATACCGCAAGTACCAGCATGCCCTCGAGATAATGGAATGGATGGAGTTTAGGAAAATGAATTACTCGAAAGCTGACTATGCCATACGCGTGGATCTTATGTCCAAAGTCAAGGGGATAGGAGCCGCTGAGGATTACTTCAGCGGCCTACCAGAATCTTCAAAGGACCGATTCACTTACGGTGCACTTTTGAACTGTTATTGCAAGGAACTGATGGAAGAAAAGGCATTGGCACATTTTGAGACGATGGACGAGTTGAACTTTGCTTCCTCTACTTTGGTCTTTAACAATCTCATGTCTCTGCATATGAGAAAGCAGAATCCAGAGAAAGTGGGTCCTTTAGTGCAAGAAATGAAGAAGAGAAACCTCCCTCTGGACACGTTTACTTATAATATATGGATGCAGAGCTACGCGGCCTTGAGTGATTTTGAAGGAGTAAAAAGAGTCCTGGAGGAAATGGAAACACAAGACGAAGAAAAATGCAGTTGGTCAACGTATAGTAACCTGGCTGCCATCTATATAAAGGCGGAACTTTTTGACAAGGCAGAGCAAGCCCTTAAAAAGTCGGAAGAAATGATGAAACCCCTGAAGCAACGAGCGCCGTACCATTTTTTGATTAGCCTCTATGCCTGCACTTCTAATCTAGGCGAGGTGAAAAGGGTATGGAAAACGCTCAAGAAATCTTTCCCCGCAACAAATAATATAAGCTATCTTGTAATGCTTCAGGCCCTTTGTAAGCTAAACGATATTGAGGGGTTGAAAGATTTGTTTGAGGAATGGGAGTCCATTTGCATTAGTTTTGATATAAGGTTGGCAAATGTTGCTATACGCGGGTACCTCAGTCAGGGCATGCATGACGAAGCAGAATTGGTCTTTACAAATGCCAGTAAGAAGACTAAAGGGTCTTTCATGAAGGCTCGGGAAATGCTTATGGTTCACGCCTTGAACACCCGTAAGGTGGATTTGGCTGTTAGCCATCTGGAAGCTGCTGTTTCGGAAAGCAAGAATGAGGAATGGCATCCATTCCCAGATACCAGAATTGCATTTCTTAAGTATTTTGAGGAAGAGAAACATGTTGATGGTGCTGAGAAATTTTGCCAGATTCTGAAGCGTCTAGGTTGTCTCAGTTGCAATGAGTATTATGTGCTGCTTAAGACTTACATAGCTGCAGGAAAATCAGATCCTGAGATGCGTCAGAGATTGAAGGAAGATCATATTGAAATAAGCCCCGAGCTTGAGAACTTGCTTGAAAAGGTTTCCGCAAGTGAATTGACTGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

506

Amino Acids

58.1

Weight (kDa)

7.87

Isoelectric Point (pI)

37.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	171 - 217	2.3e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02370 AT1G11470 AT4G01990
fragaria_vesca	FvH4_1g27080 FvH4_1g27080 FvH4_1g27080 FvH4_1g27080
malus_domestica	MD09G1284000.v1.1
prunus_persica	Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1
pyrus_communis	pycom09g19190 pycom17g27490
rosa_chinensis	RchiOBHm_Chr3g0487401
rosa_laevigata	RLG00000023007
rosa_multiflora	Rmu_co8482639.1_g000001 Rmu_sc0001955.1_g000002
rosa_roxburghii	Rroxscaffold_6G00394810
rosa_rugosa	Rorug03G0233700
rosa_samantha	Rh3AG281800 Rh3BG317400 Rh3CG315500 Rh3DG313400
rosa_wichuraiana	Rw3G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	627
AasI	GACNNNNNNGTC	1 cut(s)	1138
Acc65I	GGTACC	1 cut(s)	1071
AccB1I	GGYRCC	1 cut(s)	1071
AccII	CGCG	4 cut(s)	80, 327, 650, 1068
AclWI	GGATC	2 cut(s)	339, 1412
AcoI	YGGCCR	2 cut(s)	75, 156
AcsI	RAATTY	1 cut(s)	1328
AcuI	CTGAAG	4 cut(s)	361, 845, 944, 1364
AfaI	GTAC	5 cut(s)	55, 176, 251, 842, 1073
AfiI	CCNNNNNNNGG	4 cut(s)	33, 610, 1081, 1195
AflII	CTTAAG	2 cut(s)	1286, 1388
AflIII	ACRYGT	3 cut(s)	325, 615, 1309
AgsI	TTSAA	9 cut(s)	399, 430, 496, 668, 997, 1183, 1441, 1457, 1487
AjnI	CCWGG	3 cut(s)	94, 684, 741
AloI	GAACNNNNNNTCC	2 cut(s)	488, 520
Alw21I	GWGCWC	3 cut(s)	213, 234, 424
Alw26I	GTCTC	3 cut(s)	473, 540, 1364
Alw44I	GTGCAC	1 cut(s)	420
AlwI	GGATC	2 cut(s)	339, 1412
AlwNI	CAGNNNCTG	2 cut(s)	1342, 1421
Ama87I	CYCGRG	4 cut(s)	212, 263, 1155, 1466
AoxI	GGCC	5 cut(s)	75, 156, 382, 651, 963
ApaLI	GTGCAC	1 cut(s)	420
ApeKI	GCWGC	5 cut(s)	68, 746, 1223, 1384, 1403
ApoI	RAATTY	1 cut(s)	1328
Asp700I	GAANNNNTTC	1 cut(s)	920
Asp718I	GGTACC	1 cut(s)	1071
AspLEI	GCGC	1 cut(s)	838
AspS9I	GGNCC	3 cut(s)	403, 572, 964
AsuHPI	GGTGA	2 cut(s)	52, 901
AvaI	CYCGRG	4 cut(s)	212, 263, 1155, 1466
AvaII	GGWCC	2 cut(s)	403, 572
BaeGI	GKGCMC	1 cut(s)	424
BaeI	ACNNNNGTAYC	4 cut(s)	1055, 1063, 1088, 1096
BalI	TGGCCA	1 cut(s)	158
BanI	GGYRCC	1 cut(s)	1071
BanII	GRGCYC	2 cut(s)	213, 234
BbsI	GAAGAC	1 cut(s)	1136
Bbv12I	GWGCWC	3 cut(s)	213, 234, 424
BbvCI	CCTCAGC	1 cut(s)	366
BbvI	GCAGC	5 cut(s)	55, 733, 1210, 1371, 1390
BccI	CCATC	6 cut(s)	274, 445, 478, 758, 1221, 1310
BceAI	ACGGC	3 cut(s)	72, 90, 823
BciT130I	CCWGG	3 cut(s)	96, 686, 743
BcoDI	GTCTC	3 cut(s)	473, 540, 1364
BfaI	CTAG	2 cut(s)	881, 1352
BfmI	CTRYAG	1 cut(s)	1404
BfoI	RGCGCY	1 cut(s)	839
BfrI	CTTAAG	2 cut(s)	1286, 1388
BisI	GCNGC	9 cut(s)	69, 78, 363, 382, 651, 747, 1224, 1385, 1404
BlsI	GCNGC	9 cut(s)	70, 79, 364, 383, 652, 748, 1225, 1386, 1405
Bme1390I	CCNGG	3 cut(s)	96, 686, 743
Bme18I	GGWCC	2 cut(s)	403, 572
BmeT110I	CYCGRG	4 cut(s)	212, 263, 1155, 1466
BmgT120I	GGNCC	3 cut(s)	403, 572, 964
BmiI	GGNNCC	3 cut(s)	361, 573, 1073
BmrFI	CCNGG	3 cut(s)	96, 686, 743
BmsI	GCATC	4 cut(s)	231, 627, 1264, 1416
BpiI	GAAGAC	1 cut(s)	1136
BpmI	CTGGAG	1 cut(s)	707
Bpu10I	CCTNAGC	1 cut(s)	366
BpuEI	CTTGAG	3 cut(s)	676, 896, 1493
BsaWI	WCCGGW	1 cut(s)	26
BsaXI	ACNNNNNCTCC	2 cut(s)	138, 168
Bsc4I	CCNNNNNNNGG	4 cut(s)	33, 610, 1081, 1195
Bse1I	ACTGG	2 cut(s)	172, 1122
Bse3DI	GCAATG	1 cut(s)	1375
BseBI	CCWGG	3 cut(s)	96, 686, 743
BseGI	GGATG	3 cut(s)	285, 642, 1255
BseLI	CCNNNNNNNGG	4 cut(s)	33, 610, 1081, 1195
BseMI	GCAATG	1 cut(s)	1375
BseMII	CTCAG	5 cut(s)	357, 1090, 1314, 1375, 1413
BseNI	ACTGG	2 cut(s)	172, 1122
BseSI	GKGCMC	1 cut(s)	424
BseX3I	CGGCCG	1 cut(s)	75
BseXI	GCAGC	5 cut(s)	55, 733, 1210, 1371, 1390
BsgI	GTGCAG	1 cut(s)	853
Bsh1236I	CGCG	4 cut(s)	80, 327, 650, 1068
Bsh1285I	CGRYCG	1 cut(s)	78
BshFI	GGCC	5 cut(s)	77, 158, 384, 653, 965
BshNI	GGYRCC	1 cut(s)	1071
BsiEI	CGRYCG	1 cut(s)	78
BsiHKAI	GWGCWC	3 cut(s)	213, 234, 424
BsiHKCI	CYCGRG	4 cut(s)	212, 263, 1155, 1466
BsiSI	CCGG	1 cut(s)	27
BslI	CCNNNNNNNGG	4 cut(s)	33, 610, 1081, 1195
BsmAI	GTCTC	3 cut(s)	473, 540, 1364
BsmBI	CGTCTC	1 cut(s)	473
BsnI	GGCC	5 cut(s)	77, 158, 384, 653, 965
BsoBI	CYCGRG	4 cut(s)	212, 263, 1155, 1466
Bsp1286I	GDGCHC	3 cut(s)	213, 234, 424
Bsp143I	GATC	3 cut(s)	331, 1417, 1447
BspANI	GGCC	5 cut(s)	77, 158, 384, 653, 965
BspCNI	CTCAG	5 cut(s)	358, 1089, 1315, 1374, 1414
BspFNI	CGCG	4 cut(s)	80, 327, 650, 1068
BspHI	TCATGA	1 cut(s)	1146
BspLI	GGNNCC	3 cut(s)	361, 573, 1073
BspMAI	CTGCAG	1 cut(s)	1408
BspPI	GGATC	2 cut(s)	339, 1412
BspT107I	GGYRCC	1 cut(s)	1071
BspTI	CTTAAG	2 cut(s)	1286, 1388
BsrDI	GCAATG	1 cut(s)	1375
BsrI	ACTGG	2 cut(s)	172, 1122
BssMI	GATC	3 cut(s)	331, 1417, 1447
Bst2UI	CCWGG	3 cut(s)	96, 686, 743
Bst4CI	ACNGT	3 cut(s)	14, 419, 434
Bst6I	CTCTTC	2 cut(s)	590, 1296
BstAFI	CTTAAG	2 cut(s)	1286, 1388
BstAPI	GCANNNNNTGC	1 cut(s)	1058
BstC8I	GCNNGC	4 cut(s)	258, 789, 868, 1088
BstDEI	CTNAG	5 cut(s)	366, 1076, 1323, 1361, 1422
BstENI	CCTNNNNNAGG	1 cut(s)	1079
BstF5I	GGATG	3 cut(s)	285, 642, 1255
BstFNI	CGCG	4 cut(s)	80, 327, 650, 1068
BstH2I	RGCGCY	1 cut(s)	839
BstHHI	GCGC	1 cut(s)	838
BstKTI	GATC	3 cut(s)	334, 1420, 1450
BstMAI	GTCTC	3 cut(s)	473, 540, 1364
BstMBI	GATC	3 cut(s)	331, 1417, 1447
BstMCI	CGRYCG	1 cut(s)	78
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 74, 77, 137, 243, 317, 788, 835, 1058
BstNI	CCWGG	3 cut(s)	96, 686, 743
BstNSI	RCATGY	3 cut(s)	260, 1090, 1313
BstSCI	CCNGG	3 cut(s)	94, 684, 741
BstSFI	CTRYAG	1 cut(s)	1404
BstSLI	GKGCMC	1 cut(s)	424
BstUI	CGCG	4 cut(s)	80, 327, 650, 1068
BstV1I	GCAGC	5 cut(s)	55, 733, 1210, 1371, 1390
BstV2I	GAAGAC	1 cut(s)	1136
BstX2I	RGATCY	2 cut(s)	331, 1417
BstXI	CCANNNNNNTGG	1 cut(s)	328
BstYI	RGATCY	2 cut(s)	331, 1417
BstZI	CGGCCG	1 cut(s)	75
BsuRI	GGCC	5 cut(s)	77, 158, 384, 653, 965
BtsCI	GGATG	3 cut(s)	285, 642, 1255
Cac8I	GCNNGC	4 cut(s)	258, 789, 868, 1088
CaiI	CAGNNNCTG	2 cut(s)	1342, 1421
CciI	TCATGA	1 cut(s)	1146
CfoI	GCGC	1 cut(s)	838
Cfr13I	GGNCC	3 cut(s)	403, 572, 964
CseI	GACGC	2 cut(s)	1337, 1418
Csp6I	GTAC	5 cut(s)	54, 175, 250, 841, 1072
CviAII	CATG	6 cut(s)	257, 532, 1087, 1091, 1147, 1310
CviQI	GTAC	5 cut(s)	54, 175, 250, 841, 1072
DdeI	CTNAG	5 cut(s)	366, 1076, 1323, 1361, 1422
DpnI	GATC	3 cut(s)	333, 1419, 1449
DpnII	GATC	3 cut(s)	331, 1417, 1447
DrdI	GACNNNNNNGTC	1 cut(s)	1138
DseDI	GACNNNNNNGTC	1 cut(s)	1138
EaeI	YGGCCR	2 cut(s)	75, 156
EagI	CGGCCG	1 cut(s)	75
Eam1104I	CTCTTC	2 cut(s)	590, 1296
EarI	CTCTTC	2 cut(s)	590, 1296
EciI	GGCGGA	1 cut(s)	779
Ecl136II	GAGCTC	2 cut(s)	211, 232
EclXI	CGGCCG	1 cut(s)	75
Eco24I	GRGCYC	2 cut(s)	213, 234
Eco32I	GATATC	1 cut(s)	21
Eco47I	GGWCC	2 cut(s)	403, 572
Eco52I	CGGCCG	1 cut(s)	75
Eco53kI	GAGCTC	2 cut(s)	211, 232
Eco57I	CTGAAG	4 cut(s)	361, 845, 944, 1364
Eco88I	CYCGRG	4 cut(s)	212, 263, 1155, 1466
EcoICRI	GAGCTC	2 cut(s)	211, 232
EcoNI	CCTNNNNNAGG	1 cut(s)	1079
EcoO109I	RGGNCCY	2 cut(s)	572, 964
EcoRII	CCWGG	3 cut(s)	94, 684, 741
EcoRV	GATATC	1 cut(s)	21
EcoT22I	ATGCAT	2 cut(s)	224, 1092
EcoT38I	GRGCYC	2 cut(s)	213, 234
Esp3I	CGTCTC	1 cut(s)	473
FaeI	CATG	6 cut(s)	260, 535, 1090, 1094, 1150, 1313
FatI	CATG	6 cut(s)	256, 531, 1086, 1090, 1146, 1309
FauI	CCCGC	2 cut(s)	934, 1061
FauNDI	CATATG	1 cut(s)	543
Fnu4HI	GCNGC	9 cut(s)	69, 78, 363, 382, 651, 747, 1224, 1385, 1404
FokI	GGATG	3 cut(s)	292, 649, 1242
FriOI	GRGCYC	2 cut(s)	213, 234
Fsp4HI	GCNGC	9 cut(s)	69, 78, 363, 382, 651, 747, 1224, 1385, 1404
FspBI	CTAG	2 cut(s)	881, 1352
GlaI	GCGC	1 cut(s)	837
GluI	GCNGC	9 cut(s)	69, 78, 363, 382, 651, 747, 1224, 1385, 1404
GsuI	CTGGAG	1 cut(s)	707
HaeII	RGCGCY	1 cut(s)	839
HaeIII	GGCC	5 cut(s)	77, 158, 384, 653, 965
HapII	CCGG	1 cut(s)	27
HgaI	GACGC	2 cut(s)	1337, 1418
HhaI	GCGC	1 cut(s)	838
Hin1II	CATG	6 cut(s)	260, 535, 1090, 1094, 1150, 1313
Hin6I	GCGC	1 cut(s)	836
HinP1I	GCGC	1 cut(s)	836
HincII	GTYRAC	1 cut(s)	729
HindII	GTYRAC	1 cut(s)	729
HindIII	AAGCTT	1 cut(s)	47
HinfI	GANTC	7 cut(s)	4, 392, 408, 556, 681, 1019, 1339
HpaII	CCGG	1 cut(s)	27
HphI	GGTGA	2 cut(s)	52, 901
Hpy166II	GTNNAC	4 cut(s)	422, 621, 729, 1174
Hpy188I	TCNGA	7 cut(s)	9, 120, 805, 1234, 1344, 1417, 1434
Hpy8I	GTNNAC	4 cut(s)	422, 621, 729, 1174
Hpy99I	CGWCG	2 cut(s)	76, 145
HpyAV	CCTTC	3 cut(s)	662, 1144, 1435
HpyCH4III	ACNGT	3 cut(s)	14, 419, 434
HpyCH4IV	ACGT	5 cut(s)	32, 164, 177, 617, 731
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 74, 77, 137, 243, 317, 788, 835, 1058
HpyF3I	CTNAG	5 cut(s)	366, 1076, 1323, 1361, 1422
HpySE526I	ACGT	5 cut(s)	32, 164, 177, 617, 731
Hsp92II	CATG	6 cut(s)	260, 535, 1090, 1094, 1150, 1313
HspAI	GCGC	1 cut(s)	836
KpnI	GGTACC	1 cut(s)	1075
Kzo9I	GATC	3 cut(s)	331, 1417, 1447
LmnI	GCTCC	4 cut(s)	137, 229, 237, 359
Lsp1109I	GCAGC	5 cut(s)	55, 733, 1210, 1371, 1390
LweI	GCATC	4 cut(s)	231, 627, 1264, 1416
MaeI	CTAG	2 cut(s)	881, 1352
MaeII	ACGT	5 cut(s)	32, 164, 177, 617, 731
MaeIII	GTNAC	1 cut(s)	737
MalI	GATC	3 cut(s)	333, 1419, 1449
MboI	GATC	3 cut(s)	331, 1417, 1447
MboII	GAAGA	9 cut(s)	387, 467, 604, 607, 722, 818, 1141, 1313, 1457
MflI	RGATCY	2 cut(s)	331, 1417
MhlI	GDGCHC	3 cut(s)	213, 234, 424
MlsI	TGGCCA	1 cut(s)	158
MluCI	AATT	5 cut(s)	298, 1103, 1275, 1328, 1505
MluI	ACGCGT	1 cut(s)	325
MluNI	TGGCCA	1 cut(s)	158
MlyI	GAGTC	2 cut(s)	690, 1028
MmeI	TCCRAC	1 cut(s)	783
Mox20I	TGGCCA	1 cut(s)	158
Mph1103I	ATGCAT	2 cut(s)	224, 1092
MroXI	GAANNNNTTC	1 cut(s)	920
MscI	TGGCCA	1 cut(s)	158
MseI	TTAA	5 cut(s)	167, 522, 795, 1287, 1389
MslI	CAYNNNNRTG	2 cut(s)	326, 1314
Msp20I	TGGCCA	1 cut(s)	158
MspA1I	CMGCKG	2 cut(s)	365, 381
MspCI	CTTAAG	2 cut(s)	1286, 1388
MspI	CCGG	1 cut(s)	27
MspR9I	CCNGG	3 cut(s)	96, 686, 743
MvaI	CCWGG	3 cut(s)	96, 686, 743
MvnI	CGCG	4 cut(s)	80, 327, 650, 1068
MwoI	GCNNNNNNNGC	9 cut(s)	65, 74, 77, 137, 243, 317, 788, 835, 1058
NdeI	CATATG	1 cut(s)	543
NdeII	GATC	3 cut(s)	331, 1417, 1447
NlaIII	CATG	6 cut(s)	260, 535, 1090, 1094, 1150, 1313
NlaIV	GGNNCC	3 cut(s)	361, 573, 1073
NsiI	ATGCAT	2 cut(s)	224, 1092
NspI	RCATGY	3 cut(s)	260, 1090, 1313
PaeI	GCATGC	2 cut(s)	260, 1090
PaeR7I	CTCGAG	2 cut(s)	212, 263
PagI	TCATGA	1 cut(s)	1146
PciI	ACATGT	1 cut(s)	1309
PdmI	GAANNNNTTC	1 cut(s)	920
PfeI	GAWTC	5 cut(s)	4, 392, 408, 556, 1339
PfoI	TCCNGGA	1 cut(s)	684
PkrI	GCNGC	9 cut(s)	70, 79, 364, 383, 652, 748, 1225, 1386, 1405
PleI	GAGTC	2 cut(s)	689, 1027
PpsI	GAGTC	2 cut(s)	689, 1027
PpuMI	RGGWCCY	1 cut(s)	572
PscI	ACATGT	1 cut(s)	1309
PsiI	TTATAA	1 cut(s)	627
Psp124BI	GAGCTC	2 cut(s)	213, 234
Psp5II	RGGWCCY	1 cut(s)	572
Psp6I	CCWGG	3 cut(s)	94, 684, 741
PspGI	CCWGG	3 cut(s)	94, 684, 741
PspN4I	GGNNCC	3 cut(s)	361, 573, 1073
PspPI	GGNCC	3 cut(s)	403, 572, 964
PspPPI	RGGWCCY	1 cut(s)	572
PstI	CTGCAG	1 cut(s)	1408
PstNI	CAGNNNCTG	2 cut(s)	1342, 1421
PsuI	RGATCY	2 cut(s)	331, 1417
RsaI	GTAC	5 cut(s)	55, 176, 251, 842, 1073
RsaNI	GTAC	5 cut(s)	54, 175, 250, 841, 1072
RseI	CAYNNNNRTG	2 cut(s)	326, 1314
SacI	GAGCTC	2 cut(s)	213, 234
SaqAI	TTAA	5 cut(s)	167, 522, 795, 1287, 1389
SatI	GCNGC	9 cut(s)	69, 78, 363, 382, 651, 747, 1224, 1385, 1404
Sau3AI	GATC	3 cut(s)	331, 1417, 1447
Sau96I	GGNCC	3 cut(s)	403, 572, 964
SchI	GAGTC	2 cut(s)	690, 1028
ScrFI	CCNGG	3 cut(s)	96, 686, 743
SduI	GDGCHC	3 cut(s)	213, 234, 424
SfaNI	GCATC	4 cut(s)	231, 627, 1264, 1416
SfcI	CTRYAG	1 cut(s)	1404
Sfr274I	CTCGAG	2 cut(s)	212, 263
SinI	GGWCC	2 cut(s)	403, 572
SlaI	CTCGAG	2 cut(s)	212, 263
SmiMI	CAYNNNNRTG	2 cut(s)	326, 1314
SmlI	CTYRAG	7 cut(s)	212, 263, 655, 911, 1286, 1388, 1472
SmoI	CTYRAG	7 cut(s)	212, 263, 655, 911, 1286, 1388, 1472
SphI	GCATGC	2 cut(s)	260, 1090
Sse9I	AATT	5 cut(s)	298, 1103, 1275, 1328, 1505
SspMI	CTAG	2 cut(s)	881, 1352
SstI	GAGCTC	2 cut(s)	213, 234
StyD4I	CCNGG	3 cut(s)	94, 684, 741
TaaI	ACNGT	3 cut(s)	14, 419, 434
TaiI	ACGT	5 cut(s)	35, 167, 180, 620, 734
TaqI	TCGA	4 cut(s)	17, 213, 264, 305
TaqII	GACCGA	1 cut(s)	420
TasI	AATT	5 cut(s)	298, 1103, 1275, 1328, 1505
TauI	GCSGC	4 cut(s)	80, 365, 384, 653
TfiI	GAWTC	5 cut(s)	4, 392, 408, 556, 1339
Tru1I	TTAA	5 cut(s)	167, 522, 795, 1287, 1389
Tru9I	TTAA	5 cut(s)	167, 522, 795, 1287, 1389
TseI	GCWGC	5 cut(s)	68, 746, 1223, 1384, 1403
TspDTI	ATGAA	6 cut(s)	17, 311, 605, 830, 1135, 1163
Vha464I	CTTAAG	2 cut(s)	1286, 1388
VneI	GTGCAC	1 cut(s)	420
VpaK11BI	GGWCC	2 cut(s)	403, 572
XagI	CCTNNNNNAGG	1 cut(s)	1079
XapI	RAATTY	1 cut(s)	1328
XceI	RCATGY	3 cut(s)	260, 1090, 1313
XhoI	CTCGAG	2 cut(s)	212, 263
XmnI	GAANNNNTTC	1 cut(s)	920
XspI	CTAG	2 cut(s)	881, 1352
Zsp2I	ATGCAT	2 cut(s)	224, 1092

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.