Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0006200

Physical Location & Seq

Genomic Coordinates Forward (+)

25636529 .. 25638423

Gene Structure 1895 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g27490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGAATCTGAGCCTTTCGATATTTACCGGAATGTGGCTGGCGAGGAAGCTCTGCACGACAGTTGAGGCTGCGACGGTGGCGGAAGCTGTGACGGCGGCGAAAATGGGTCAGCCTGGAAACCCCATTAGGCTTTATCGGAGGCTATCGGCTTTGGGAGTGACCGGAGAAAACTTGGCGAAGACGTTAAACCAGTACATTATGGAGGGCGAAATGTTCAGGAAGAGTCAGCTCGCGAAATGCAACAAGGAGCTCCGCAAGCACAGCAAGCACCAGCAGGCCCTCGAGGTTACGCCCATTTCCACTTCTACCCCTCCCCCTTTATTTTTTGCTTCATTTTATCCCGAAATTTTCAATTGCAGGCAATACTATGCCGTACGCGTGGATCTTACGTCCAAAGTCAAAGGGATAGAAGCCGCTGAGGATTGTGTCAGCGGCCTACCGGAATTGTCAAAGGACTTATTCACTTACAGTGCACTTATGCACTGTTACTGCAAGGAACTGATGGAAGAAAAGGCACTGGCGCTTTTTGCAACAATGGATGAGTTGGGATGTGCTTCGTCTACTTTTATCTTTAACAGTCTCATGTCTCTGCATATGAGAAAGCAGAACCCGGAGAAAGTGGATACTTTAGTGCAAGAAATGAAGAAGAGAAACATCCCTCTGGACAAACGTACTTATAAAACATGGATGCAGAGCTACGCCGCCTTAGAAGATTTTGAAGCAGTAGGAAGAGTCCTGGACGAATTGAAAACACACAATGGAAAAAAGGGCAGTTGGTCAGCCTATAGTAACCTGGCTGACATCTATGTAAAGGCGGAGCTTTTTGACGAGGCAGATGAAGTCCTTAAGACGGCAGAGAAACTGGTGAAACCCCTGAAGCGGCGTAAGCATTACTATTTTTTAATTAGCCTCTATGCCTGCACTTCTAATCTAAGTGGAGTCAAAAGGGTATGGAAAACACTCAGGAAATCTTTCCCCACAAAAAACAATGAAAGCTATCTTGTAATGCTTCAGGCCCTTTGTAAGCTAAATGACATTGAGGGATTGAAAGAAATGTTTGAGGAATGGGAGTCCATTTGCTCCAAATATGATATGAGTTTGGCAAATGTTGCTATACGTGGGTACCTCAGTCAGGGCATGCACGAAGAAGCAGAATCGATCTTTGCAAATGCCTGTAAGAAGACGAAAGGTACGGGGTCTTTCCTCGAGGCTCAGGAAATGCTCATGGTTCACGCCTTGAACACGCGTAGGGTGGATTTGGCTGATAGCCATTTGGGAGCTGCTGTTTCGGAAAGCAAGGATGGGGAGTGGCATCCATCCCCAGATACCAGAATTGCATTTCTCAAGTATTTTGAGGTCGAGAAAGATGTTGATGGTGCTGAGAAATTTTGCAAGATTCTGAAGCGTCTAGGTTGTCTCAGTTGCAATGAGTATTGTTTGTTGCTTAAGACTTACGTAGCTGCTGGAAAATTGGATCCTGCGATGCGTCAGAGATTGAAGGAAGAGCATATTGAAATCAGCCCCGAGCTTGAGAATTTACTTGAGAAGGTTTCCGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

520

Amino Acids

58.91

Weight (kDa)

8.03

Isoelectric Point (pI)

42.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	187 - 233	4e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02370 AT1G11470 AT4G01990
fragaria_vesca	FvH4_1g27080 FvH4_1g27080 FvH4_1g27080 FvH4_1g27080
malus_domestica	MD09G1284000.v1.1
prunus_persica	Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1
pyrus_communis	pycom09g19190 pycom17g27490
rosa_chinensis	RchiOBHm_Chr3g0487401
rosa_laevigata	RLG00000023007
rosa_multiflora	Rmu_co8482639.1_g000001 Rmu_sc0001955.1_g000002
rosa_roxburghii	Rroxscaffold_6G00394810
rosa_rugosa	Rorug03G0233700
rosa_samantha	Rh3AG281800 Rh3BG317400 Rh3CG315500 Rh3DG313400
rosa_wichuraiana	Rw3G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	678
AbsI	CCTCGAGG	2 cut(s)	281, 1205
Acc65I	GGTACC	1 cut(s)	1122
AccB1I	GGYRCC	1 cut(s)	1122
AccI	GTMKAC	1 cut(s)	560
AccII	CGCG	3 cut(s)	233, 378, 1246
AciI	CCGC	8 cut(s)	80, 95, 253, 414, 432, 702, 815, 880
AclWI	GGATC	3 cut(s)	390, 1469, 1482
AcsI	RAATTY	3 cut(s)	345, 1385, 1534
AcuI	CTGAAG	3 cut(s)	896, 995, 1421
AfaI	GTAC	5 cut(s)	194, 375, 673, 1124, 1192
AfiI	CCNNNNNNNGG	4 cut(s)	33, 850, 879, 1132
AflII	CTTAAG	2 cut(s)	845, 1445
AflIII	ACRYGT	2 cut(s)	376, 1244
AgsI	TTSAA	7 cut(s)	352, 719, 748, 1048, 1240, 1498, 1514
AjnI	CCWGG	3 cut(s)	112, 735, 792
Alw21I	GWGCWC	2 cut(s)	252, 475
Alw26I	GTCTC	3 cut(s)	584, 591, 1421
Alw44I	GTGCAC	1 cut(s)	471
AlwI	GGATC	3 cut(s)	390, 1469, 1482
Ama87I	CYCGRG	3 cut(s)	281, 1205, 1523
AoxI	GGCC	3 cut(s)	276, 433, 1014
ApaLI	GTGCAC	1 cut(s)	471
ApeKI	GCWGC	3 cut(s)	68, 1280, 1460
ApoI	RAATTY	3 cut(s)	345, 1385, 1534
Asp700I	GAANNNNTTC	1 cut(s)	971
Asp718I	GGTACC	1 cut(s)	1122
AspLEI	GCGC	1 cut(s)	523
AspS9I	GGNCC	2 cut(s)	277, 1015
AsuC2I	CCSGG	1 cut(s)	611
AsuHPI	GGTGA	1 cut(s)	877
AvaI	CYCGRG	3 cut(s)	281, 1205, 1523
BaeGI	GKGCMC	1 cut(s)	475
BaeI	ACNNNNGTAYC	6 cut(s)	615, 648, 1106, 1114, 1139, 1147
BamHI	GGATCC	1 cut(s)	1474
BanI	GGYRCC	1 cut(s)	1122
BanII	GRGCYC	1 cut(s)	252
BbsI	GAAGAC	2 cut(s)	185, 1187
Bbv12I	GWGCWC	2 cut(s)	252, 475
BbvCI	CCTCAGC	1 cut(s)	417
BbvI	GCAGC	3 cut(s)	55, 1267, 1447
BccI	CCATC	4 cut(s)	496, 1295, 1324, 1367
BceAI	ACGGC	3 cut(s)	108, 356, 867
BciT130I	CCWGG	3 cut(s)	114, 737, 794
BciVI	GTATCC	1 cut(s)	616
BcnI	CCSGG	1 cut(s)	611
BcoDI	GTCTC	3 cut(s)	584, 591, 1421
BfaI	CTAG	1 cut(s)	1409
BfmI	CTRYAG	1 cut(s)	784
BfoI	RGCGCY	1 cut(s)	524
BfrI	CTTAAG	2 cut(s)	845, 1445
BfuI	GTATCC	1 cut(s)	616
BisI	GCNGC	8 cut(s)	69, 96, 414, 433, 702, 881, 1281, 1461
BlsI	GCNGC	8 cut(s)	70, 97, 415, 434, 703, 882, 1282, 1462
Bme1390I	CCNGG	4 cut(s)	114, 611, 737, 794
BmeT110I	CYCGRG	3 cut(s)	281, 1205, 1523
BmgT120I	GGNCC	2 cut(s)	277, 1015
BmiI	GGNNCC	2 cut(s)	1124, 1476
BmrFI	CCNGG	4 cut(s)	114, 611, 737, 794
BmsI	GCATC	3 cut(s)	678, 1321, 1473
BpiI	GAAGAC	2 cut(s)	185, 1187
Bpu10I	CCTNAGC	2 cut(s)	417, 1212
BpuEI	CTTGAG	2 cut(s)	1328, 1550
BpuMI	CCSGG	1 cut(s)	611
Bsa29I	ATCGAT	1 cut(s)	1157
BsaAI	YACGTR	2 cut(s)	1118, 1456
BsaWI	WCCGGW	3 cut(s)	26, 161, 439
BsaXI	ACNNNNNCTCC	2 cut(s)	1269, 1299
Bsc4I	CCNNNNNNNGG	4 cut(s)	33, 850, 879, 1132
Bse1I	ACTGG	3 cut(s)	190, 522, 867
Bse3DI	GCAATG	1 cut(s)	1432
BseBI	CCWGG	3 cut(s)	114, 737, 794
BseCI	ATCGAT	1 cut(s)	1157
BseGI	GGATG	7 cut(s)	544, 554, 654, 693, 1306, 1312, 1316
BseLI	CCNNNNNNNGG	4 cut(s)	33, 850, 879, 1132
BseMI	GCAATG	1 cut(s)	1432
BseMII	CTCAG	6 cut(s)	408, 976, 1141, 1226, 1371, 1432
BseNI	ACTGG	3 cut(s)	190, 522, 867
BseSI	GKGCMC	1 cut(s)	475
BseXI	GCAGC	3 cut(s)	55, 1267, 1447
BsgI	GTGCAG	2 cut(s)	37, 904
Bsh1236I	CGCG	3 cut(s)	233, 378, 1246
BshFI	GGCC	3 cut(s)	278, 435, 1016
BshNI	GGYRCC	1 cut(s)	1122
BshVI	ATCGAT	1 cut(s)	1157
BsiHKAI	GWGCWC	2 cut(s)	252, 475
BsiHKCI	CYCGRG	3 cut(s)	281, 1205, 1523
BsiSI	CCGG	4 cut(s)	27, 162, 440, 611
BsiWI	CGTACG	1 cut(s)	373
BslI	CCNNNNNNNGG	4 cut(s)	33, 850, 879, 1132
BsmAI	GTCTC	3 cut(s)	584, 591, 1421
BsnI	GGCC	3 cut(s)	278, 435, 1016
BsoBI	CYCGRG	3 cut(s)	281, 1205, 1523
Bsp1286I	GDGCHC	2 cut(s)	252, 475
Bsp143I	GATC	3 cut(s)	382, 1158, 1474
Bsp68I	TCGCGA	1 cut(s)	233
BspACI	CCGC	8 cut(s)	80, 95, 253, 414, 432, 702, 815, 880
BspANI	GGCC	3 cut(s)	278, 435, 1016
BspCNI	CTCAG	6 cut(s)	409, 975, 1140, 1225, 1372, 1431
BspDI	ATCGAT	1 cut(s)	1157
BspFNI	CGCG	3 cut(s)	233, 378, 1246
BspLI	GGNNCC	2 cut(s)	1124, 1476
BspPI	GGATC	3 cut(s)	390, 1469, 1482
BspQI	GCTCTTC	1 cut(s)	1497
BspT107I	GGYRCC	1 cut(s)	1122
BspTI	CTTAAG	2 cut(s)	845, 1445
BsrDI	GCAATG	1 cut(s)	1432
BsrI	ACTGG	3 cut(s)	190, 522, 867
BssMI	GATC	3 cut(s)	382, 1158, 1474
Bst2UI	CCWGG	3 cut(s)	114, 737, 794
Bst4CI	ACNGT	5 cut(s)	61, 76, 470, 485, 578
Bst6I	CTCTTC	4 cut(s)	215, 641, 724, 1497
BstAFI	CTTAAG	2 cut(s)	845, 1445
BstAPI	GCANNNNNTGC	1 cut(s)	1109
BstBAI	YACGTR	2 cut(s)	1118, 1456
BstC8I	GCNNGC	8 cut(s)	39, 231, 257, 266, 276, 359, 919, 1139
BstDEI	CTNAG	9 cut(s)	8, 417, 706, 932, 962, 1127, 1212, 1380, 1418
BstENI	CCTNNNNNAGG	1 cut(s)	1130
BstF5I	GGATG	7 cut(s)	544, 554, 654, 693, 1306, 1312, 1316
BstFNI	CGCG	3 cut(s)	233, 378, 1246
BstH2I	RGCGCY	1 cut(s)	524
BstHHI	GCGC	1 cut(s)	523
BstKTI	GATC	3 cut(s)	385, 1161, 1477
BstMAI	GTCTC	3 cut(s)	584, 591, 1421
BstMBI	GATC	3 cut(s)	382, 1158, 1474
BstMWI	GCNNNNNNNGC	8 cut(s)	77, 92, 256, 261, 265, 527, 886, 1109
BstNI	CCWGG	3 cut(s)	114, 737, 794
BstNSI	RCATGY	1 cut(s)	1141
BstSCI	CCNGG	4 cut(s)	112, 609, 735, 792
BstSFI	CTRYAG	1 cut(s)	784
BstSLI	GKGCMC	1 cut(s)	475
BstSNI	TACGTA	1 cut(s)	1456
BstUI	CGCG	3 cut(s)	233, 378, 1246
BstV1I	GCAGC	3 cut(s)	55, 1267, 1447
BstV2I	GAAGAC	2 cut(s)	185, 1187
BstX2I	RGATCY	2 cut(s)	382, 1474
BstYI	RGATCY	2 cut(s)	382, 1474
Bsu15I	ATCGAT	1 cut(s)	1157
BsuI	GTATCC	1 cut(s)	616
BsuRI	GGCC	3 cut(s)	278, 435, 1016
BsuTUI	ATCGAT	1 cut(s)	1157
BtgZI	GCGATG	1 cut(s)	1496
BtsCI	GGATG	7 cut(s)	544, 554, 654, 693, 1306, 1312, 1316
BtsIMutI	CAGTG	3 cut(s)	475, 481, 515
BtuMI	TCGCGA	1 cut(s)	233
Cac8I	GCNNGC	8 cut(s)	39, 231, 257, 266, 276, 359, 919, 1139
CfoI	GCGC	1 cut(s)	523
Cfr13I	GGNCC	2 cut(s)	277, 1015
ClaI	ATCGAT	1 cut(s)	1157
CseI	GACGC	2 cut(s)	1394, 1475
Csp6I	GTAC	5 cut(s)	193, 374, 672, 1123, 1191
CviAII	CATG	4 cut(s)	583, 684, 1138, 1225
CviQI	GTAC	5 cut(s)	193, 374, 672, 1123, 1191
DdeI	CTNAG	9 cut(s)	8, 417, 706, 932, 962, 1127, 1212, 1380, 1418
DpnI	GATC	3 cut(s)	384, 1160, 1476
DpnII	GATC	3 cut(s)	382, 1158, 1474
Eam1104I	CTCTTC	4 cut(s)	215, 641, 724, 1497
EarI	CTCTTC	4 cut(s)	215, 641, 724, 1497
EciI	GGCGGA	2 cut(s)	95, 830
Ecl136II	GAGCTC	1 cut(s)	250
Eco105I	TACGTA	1 cut(s)	1456
Eco24I	GRGCYC	1 cut(s)	252
Eco53kI	GAGCTC	1 cut(s)	250
Eco57I	CTGAAG	3 cut(s)	896, 995, 1421
Eco88I	CYCGRG	3 cut(s)	281, 1205, 1523
EcoICRI	GAGCTC	1 cut(s)	250
EcoNI	CCTNNNNNAGG	1 cut(s)	1130
EcoO109I	RGGNCCY	2 cut(s)	277, 1015
EcoRII	CCWGG	3 cut(s)	112, 735, 792
EcoT38I	GRGCYC	1 cut(s)	252
FaeI	CATG	4 cut(s)	586, 687, 1141, 1228
FatI	CATG	4 cut(s)	582, 683, 1137, 1224
FauNDI	CATATG	1 cut(s)	594
FblI	GTMKAC	1 cut(s)	560
Fnu4HI	GCNGC	8 cut(s)	69, 96, 414, 433, 702, 881, 1281, 1461
FokI	GGATG	7 cut(s)	551, 561, 641, 700, 1299, 1303, 1313
FriOI	GRGCYC	1 cut(s)	252
Fsp4HI	GCNGC	8 cut(s)	69, 96, 414, 433, 702, 881, 1281, 1461
FspBI	CTAG	1 cut(s)	1409
GlaI	GCGC	1 cut(s)	522
GluI	GCNGC	8 cut(s)	69, 96, 414, 433, 702, 881, 1281, 1461
HaeII	RGCGCY	1 cut(s)	524
HaeIII	GGCC	3 cut(s)	278, 435, 1016
HapII	CCGG	4 cut(s)	27, 162, 440, 611
HgaI	GACGC	2 cut(s)	1394, 1475
HhaI	GCGC	1 cut(s)	523
Hin1II	CATG	4 cut(s)	586, 687, 1141, 1228
Hin6I	GCGC	1 cut(s)	521
HinP1I	GCGC	1 cut(s)	521
HinfI	GANTC	7 cut(s)	4, 223, 732, 939, 1070, 1154, 1396
HpaII	CCGG	4 cut(s)	27, 162, 440, 611
HphI	GGTGA	1 cut(s)	877
Hpy166II	GTNNAC	3 cut(s)	473, 561, 1231
Hpy188I	TCNGA	6 cut(s)	9, 138, 1291, 1401, 1491, 1555
Hpy188III	TCNNGA	7 cut(s)	217, 232, 341, 662, 964, 1214, 1360
Hpy8I	GTNNAC	3 cut(s)	473, 561, 1231
Hpy99I	CGWCG	1 cut(s)	76
HpyAV	CCTTC	2 cut(s)	1492, 1540
HpyCH4III	ACNGT	5 cut(s)	61, 76, 470, 485, 578
HpyCH4IV	ACGT	5 cut(s)	182, 389, 670, 1117, 1455
HpyF10VI	GCNNNNNNNGC	8 cut(s)	77, 92, 256, 261, 265, 527, 886, 1109
HpyF3I	CTNAG	9 cut(s)	8, 417, 706, 932, 962, 1127, 1212, 1380, 1418
HpySE526I	ACGT	5 cut(s)	182, 389, 670, 1117, 1455
Hsp92II	CATG	4 cut(s)	586, 687, 1141, 1228
HspAI	GCGC	1 cut(s)	521
KpnI	GGTACC	1 cut(s)	1126
Kzo9I	GATC	3 cut(s)	382, 1158, 1474
LguI	GCTCTTC	1 cut(s)	1497
LmnI	GCTCC	5 cut(s)	247, 255, 817, 1085, 1277
Lsp1109I	GCAGC	3 cut(s)	55, 1267, 1447
LweI	GCATC	3 cut(s)	678, 1321, 1473
MaeI	CTAG	1 cut(s)	1409
MaeII	ACGT	5 cut(s)	182, 389, 670, 1117, 1455
MaeIII	GTNAC	5 cut(s)	88, 157, 286, 485, 788
MalI	GATC	3 cut(s)	384, 1160, 1476
MboI	GATC	3 cut(s)	382, 1158, 1474
MfeI	CAATTG	1 cut(s)	352
MflI	RGATCY	2 cut(s)	382, 1474
MhlI	GDGCHC	2 cut(s)	252, 475
MluCI	AATT	9 cut(s)	345, 352, 443, 743, 903, 1332, 1385, 1469, 1534
MluI	ACGCGT	2 cut(s)	376, 1244
MlyI	GAGTC	4 cut(s)	232, 741, 948, 1079
MroXI	GAANNNNTTC	1 cut(s)	971
MseI	TTAA	5 cut(s)	185, 573, 846, 902, 1446
MspA1I	CMGCKG	2 cut(s)	416, 432
MspCI	CTTAAG	2 cut(s)	845, 1445
MspI	CCGG	4 cut(s)	27, 162, 440, 611
MspR9I	CCNGG	4 cut(s)	114, 611, 737, 794
MunI	CAATTG	1 cut(s)	352
MvaI	CCWGG	3 cut(s)	114, 737, 794
MvnI	CGCG	3 cut(s)	233, 378, 1246
MwoI	GCNNNNNNNGC	8 cut(s)	77, 92, 256, 261, 265, 527, 886, 1109
NciI	CCSGG	1 cut(s)	611
NdeI	CATATG	1 cut(s)	594
NdeII	GATC	3 cut(s)	382, 1158, 1474
NlaIII	CATG	4 cut(s)	586, 687, 1141, 1228
NlaIV	GGNNCC	2 cut(s)	1124, 1476
NmuCI	GTSAC	2 cut(s)	88, 157
NruI	TCGCGA	1 cut(s)	233
NspI	RCATGY	1 cut(s)	1141
PaeI	GCATGC	1 cut(s)	1141
PaeR7I	CTCGAG	2 cut(s)	281, 1205
PciSI	GCTCTTC	1 cut(s)	1497
PdmI	GAANNNNTTC	1 cut(s)	971
PfeI	GAWTC	3 cut(s)	4, 1154, 1396
Pfl23II	CGTACG	1 cut(s)	373
PfoI	TCCNGGA	1 cut(s)	735
PkrI	GCNGC	8 cut(s)	70, 97, 415, 434, 703, 882, 1282, 1462
PleI	GAGTC	4 cut(s)	231, 740, 947, 1078
PpsI	GAGTC	4 cut(s)	231, 740, 947, 1078
Ppu21I	YACGTR	2 cut(s)	1118, 1456
PsiI	TTATAA	1 cut(s)	678
Psp124BI	GAGCTC	1 cut(s)	252
Psp6I	CCWGG	3 cut(s)	112, 735, 792
PspGI	CCWGG	3 cut(s)	112, 735, 792
PspLI	CGTACG	1 cut(s)	373
PspN4I	GGNNCC	2 cut(s)	1124, 1476
PspPI	GGNCC	2 cut(s)	277, 1015
PspXI	VCTCGAGB	2 cut(s)	281, 1205
PsuI	RGATCY	2 cut(s)	382, 1474
RruI	TCGCGA	1 cut(s)	233
RsaI	GTAC	5 cut(s)	194, 375, 673, 1124, 1192
RsaNI	GTAC	5 cut(s)	193, 374, 672, 1123, 1191
SacI	GAGCTC	1 cut(s)	252
SapI	GCTCTTC	1 cut(s)	1497
SaqAI	TTAA	5 cut(s)	185, 573, 846, 902, 1446
SatI	GCNGC	8 cut(s)	69, 96, 414, 433, 702, 881, 1281, 1461
Sau3AI	GATC	3 cut(s)	382, 1158, 1474
Sau96I	GGNCC	2 cut(s)	277, 1015
SchI	GAGTC	4 cut(s)	232, 741, 948, 1079
ScrFI	CCNGG	4 cut(s)	114, 611, 737, 794
SduI	GDGCHC	2 cut(s)	252, 475
SfaNI	GCATC	3 cut(s)	678, 1321, 1473
SfcI	CTRYAG	1 cut(s)	784
Sfr274I	CTCGAG	2 cut(s)	281, 1205
SlaI	CTCGAG	2 cut(s)	281, 1205
SmlI	CTYRAG	7 cut(s)	281, 845, 1205, 1343, 1445, 1529, 1541
SmoI	CTYRAG	7 cut(s)	281, 845, 1205, 1343, 1445, 1529, 1541
SnaBI	TACGTA	1 cut(s)	1456
SphI	GCATGC	1 cut(s)	1141
Sse9I	AATT	9 cut(s)	345, 352, 443, 743, 903, 1332, 1385, 1469, 1534
SsiI	CCGC	8 cut(s)	80, 95, 253, 414, 432, 702, 815, 880
SspMI	CTAG	1 cut(s)	1409
SstI	GAGCTC	1 cut(s)	252
StyD4I	CCNGG	4 cut(s)	112, 609, 735, 792
TaaI	ACNGT	5 cut(s)	61, 76, 470, 485, 578
TaiI	ACGT	5 cut(s)	185, 392, 673, 1120, 1458
TaqI	TCGA	5 cut(s)	17, 282, 1157, 1206, 1359
TasI	AATT	9 cut(s)	345, 352, 443, 743, 903, 1332, 1385, 1469, 1534
TatI	WGTACW	1 cut(s)	192
TauI	GCSGC	5 cut(s)	98, 416, 435, 704, 883
TfiI	GAWTC	3 cut(s)	4, 1154, 1396
Tru1I	TTAA	5 cut(s)	185, 573, 846, 902, 1446
Tru9I	TTAA	5 cut(s)	185, 573, 846, 902, 1446
TscAI	CASTG	3 cut(s)	475, 488, 522
TseFI	GTSAC	2 cut(s)	88, 157
TseI	GCWGC	3 cut(s)	68, 1280, 1460
Tsp45I	GTSAC	2 cut(s)	88, 157
TspDTI	ATGAA	5 cut(s)	17, 321, 656, 852, 1005
TspRI	CASTG	3 cut(s)	475, 488, 522
Vha464I	CTTAAG	2 cut(s)	845, 1445
VneI	GTGCAC	1 cut(s)	471
XagI	CCTNNNNNAGG	1 cut(s)	1130
XapI	RAATTY	3 cut(s)	345, 1385, 1534
XceI	RCATGY	1 cut(s)	1141
XhoI	CTCGAG	2 cut(s)	281, 1205
XmiI	GTMKAC	1 cut(s)	560
XmnI	GAANNNNTTC	1 cut(s)	971
XspI	CTAG	1 cut(s)	1409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.