Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0006200

Physical Location & Seq

Genomic Coordinates Reverse (-)

32579436 .. 32581578

Gene Structure 2143 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G024950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1506 bp

ATGAATCGTAGCCGTTGGATGATGTCGTCGGGAGCGGGGGAGCTGGTGAGGAAGCTCTGTACGGCGGCGGCGGGGGGTCGGCGTGACAATCCCGATAGGCTGTACCGGAGGTTGTCGGCTTTGGGAGGAAGCGGGAGGAGCGCGGCCACGGCCTTGAATGATTACATCATGGAGGGCAGAACGGTCAAGAAATATGAGCTCGAGCGCTGCATCAAGGAGCTCCGCAAGTACGGCCAGTACCAGAATGCTCTAGAGATAATGGAATGGATGGAGTTTAGGAAAATTCATTATGCTTTGCCTGACTATGCCGTACGGTTGGATCTTACGGCGAAAGCCAAAGGGATAGAGGCAGCTGAGAGTTACTTCAGCAATTTAGCACCGTCTGCGAAGAACAAATTGACTTACGGATCCCTTTTGAACTGTTATTGCAAGGAAGTGATGGAAGAGAAGGCATTGGCGCTTTATCAGAAGATGGATGAGTTGGACTATGCCAACTCTACTCTGGTTTTTAACAATCTCATGTCTTTGTACATGAGAAAGGAGCGGCCGGAGAAAGTGGCGCCTTTCGTAGAGCAAATGAAGCAGAGGGAGATATCTTTAGATACGTTTAGTTACAATATCTGGATGCAGAGCTATGCCTCTTTGAATGATATTGAAGGCGTGGAGAGAGTTGTGGAAGAGATGCAAAGCCAAGATCAAGACAAATGCAACTGGTCAACATATAGTAATCTGGCTTCCATCTATGTAAAGGCGCAGCTTTTTGAGAAGGCTGAGCTAGCGCTTAAAATGTCGGAGAAAATGATGATACCGCTGAAGCAGCGCCAGACATACCATTTCTTGATTACCCTCTACGCCAACACTGGTAATCTAGGTGAGGTCAAAAGAATATGGGAATCCCTCAAGTTAGCTTTCCCAGAAACCACCAATATGAGCTATATACTTATGCTTCAAGCTCTATGTAAGCTAAAAGATGTTGAGGGTTTGAAAGAATGCTTTGAGGAGTGGCAGTCCAATTGCTCCAGTTATGATATGAGGTTAGCAAATGTTGTTATACGTGCTTATCTTAGTCAGGACATGTATGAAGAAGCGATGTTGATCTTTAAGGATGCTACTAAGAGGTCTAAAGGGCCTTTCTTCAAGGCTCGAGAAATGTTCATGGTTTACTTCTTGGATGCCCGTCAGGTTGATTCGGCCATTAGCTATTTGGGAGAGGCGATTTCAGAAACCAAGGATGAGAATTGGCATCCGTCTCCAGAAATCATTGGTGCATTTTTTAAGTATTTTGAGGAAACAAAAGATGTTGATAGCTCTGAAAACTTTCATAAGATTCTGAAGCGTCTAAATTGTCTCAGTTCCAATGAGTATTCTTTGTTGCTTAAGGTTTATCTAGCTGCTGGTGAATTACTTCCTGAGATATGTCAGAGATTGAAGGAAGACAACATTCAAATAAGCCCCGAGCTTGAGGAATTGGTGGAGAGGGTTTCCCCAAGTAGATCGACAGCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

501

Amino Acids

58.03

Weight (kDa)

5.92

Isoelectric Point (pI)

54.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	167 - 213	2.9e-07	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006200)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G02370 AT1G11470 AT4G01990
fragaria_vesca	FvH4_1g27080 FvH4_1g27080 FvH4_1g27080 FvH4_1g27080
malus_domestica	MD09G1284000.v1.1
prunus_persica	Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1 Prupe.3G010700_v2.0.a1
pyrus_communis	pycom09g19190 pycom17g27490
rosa_chinensis	RchiOBHm_Chr3g0487401
rosa_laevigata	RLG00000023007
rosa_multiflora	Rmu_co8482639.1_g000001 Rmu_sc0001955.1_g000002
rosa_roxburghii	Rroxscaffold_6G00394810
rosa_rugosa	Rorug03G0233700
rosa_samantha	Rh3AG281800 Rh3BG317400 Rh3CG315500 Rh3DG313400
rosa_wichuraiana	Rw3G024950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	559
AccBSI	CCGCTC	2 cut(s)	35, 544
AccII	CGCG	1 cut(s)	143
AciI	CCGC	9 cut(s)	35, 65, 68, 71, 132, 143, 223, 544, 809
AclWI	GGATC	3 cut(s)	327, 402, 415
AcoI	YGGCCR	4 cut(s)	144, 232, 545, 1191
AcsI	RAATTY	1 cut(s)	282
AcuI	CTGAAG	3 cut(s)	349, 833, 1352
AcyI	GRCGYC	1 cut(s)	560
AfaI	GTAC	6 cut(s)	61, 104, 230, 239, 312, 530
AfeI	AGCGCT	2 cut(s)	206, 780
AflII	CTTAAG	1 cut(s)	1376
AflIII	ACRYGT	1 cut(s)	1074
AgsI	TTSAA	9 cut(s)	157, 418, 646, 656, 950, 985, 1138, 1429, 1445
Alw21I	GWGCWC	2 cut(s)	201, 222
Alw26I	GTCTC	2 cut(s)	1254, 1352
AlwI	GGATC	3 cut(s)	327, 402, 415
Ama87I	CYCGRG	3 cut(s)	200, 1143, 1454
Aor51HI	AGCGCT	2 cut(s)	206, 780
AoxI	GGCC	6 cut(s)	144, 150, 232, 545, 1127, 1191
ApeKI	GCWGC	5 cut(s)	207, 350, 754, 817, 1391
ApoI	RAATTY	1 cut(s)	282
Asp700I	GAANNNNTTC	2 cut(s)	1317, 1404
AspLEI	GCGC	7 cut(s)	143, 207, 460, 562, 754, 781, 822
AspS9I	GGNCC	1 cut(s)	1127
AsuHPI	GGTGA	3 cut(s)	58, 884, 1409
AsuNHI	GCTAGC	1 cut(s)	775
AvaI	CYCGRG	3 cut(s)	200, 1143, 1454
BamHI	GGATCC	1 cut(s)	407
BanI	GGYRCC	1 cut(s)	559
BanII	GRGCYC	2 cut(s)	201, 222
BarI	GAAGNNNNNNTAC	2 cut(s)	718, 750
BbsI	GAAGAC	1 cut(s)	1440
Bbv12I	GWGCWC	2 cut(s)	201, 222
BbvI	GCAGC	5 cut(s)	194, 362, 766, 829, 1378
BccI	CCATC	4 cut(s)	262, 433, 466, 746
BceAI	ACGGC	5 cut(s)	78, 165, 247, 293, 342
BcoDI	GTCTC	2 cut(s)	1254, 1352
BfaI	CTAG	4 cut(s)	251, 776, 869, 1388
BfoI	RGCGCY	5 cut(s)	208, 461, 563, 782, 823
BfrI	CTTAAG	1 cut(s)	1376
BisI	GCNGC	9 cut(s)	66, 69, 144, 208, 351, 545, 755, 818, 1392
BlpI	GCTNAGC	1 cut(s)	771
BlsI	GCNGC	9 cut(s)	67, 70, 145, 209, 352, 546, 756, 819, 1393
BmeT110I	CYCGRG	3 cut(s)	200, 1143, 1454
BmgT120I	GGNCC	1 cut(s)	1127
BmiI	GGNNCC	2 cut(s)	409, 561
BmsI	GCATC	6 cut(s)	219, 615, 672, 1096, 1162, 1252
BmtI	GCTAGC	1 cut(s)	779
BpiI	GAAGAC	1 cut(s)	1440
BpmI	CTGGAG	2 cut(s)	1003, 1236
Bpu1102I	GCTNAGC	1 cut(s)	771
BpuEI	CTTGAG	2 cut(s)	884, 1481
BsaAI	YACGTR	1 cut(s)	1055
BsaBI	GATNNNNATC	1 cut(s)	1094
BsaHI	GRCGYC	1 cut(s)	560
BsaJI	CCNNGG	2 cut(s)	147, 1227
BsaWI	WCCGGW	1 cut(s)	105
BsaXI	ACNNNNNCTCC	2 cut(s)	992, 1022
Bse1I	ACTGG	4 cut(s)	235, 716, 865, 1020
Bse8I	GATNNNNATC	1 cut(s)	1094
BseDI	CCNNGG	2 cut(s)	147, 1227
BseGI	GGATG	8 cut(s)	24, 273, 481, 630, 1111, 1177, 1237, 1243
BseJI	GATNNNNATC	1 cut(s)	1094
BseMII	CTCAG	4 cut(s)	345, 762, 1363, 1401
BseNI	ACTGG	4 cut(s)	235, 716, 865, 1020
BseRI	GAGGAG	2 cut(s)	151, 1013
BseX3I	CGGCCG	1 cut(s)	545
BseXI	GCAGC	5 cut(s)	194, 362, 766, 829, 1378
Bsh1236I	CGCG	1 cut(s)	143
Bsh1285I	CGRYCG	1 cut(s)	548
BshFI	GGCC	6 cut(s)	146, 152, 234, 547, 1129, 1193
BshNI	GGYRCC	1 cut(s)	559
BsiEI	CGRYCG	1 cut(s)	548
BsiHKAI	GWGCWC	2 cut(s)	201, 222
BsiHKCI	CYCGRG	3 cut(s)	200, 1143, 1454
BsiSI	CCGG	2 cut(s)	106, 548
BsiWI	CGTACG	1 cut(s)	310
BsmAI	GTCTC	2 cut(s)	1254, 1352
BsmBI	CGTCTC	1 cut(s)	1254
BsmI	GAATGC	2 cut(s)	250, 995
BsnI	GGCC	6 cut(s)	146, 152, 234, 547, 1129, 1193
BsoBI	CYCGRG	3 cut(s)	200, 1143, 1454
Bsp1286I	GDGCHC	2 cut(s)	201, 222
Bsp1407I	TGTACA	1 cut(s)	528
Bsp143I	GATC	5 cut(s)	319, 407, 694, 1095, 1493
Bsp1720I	GCTNAGC	1 cut(s)	771
BspACI	CCGC	9 cut(s)	35, 65, 68, 71, 132, 143, 223, 544, 809
BspANI	GGCC	6 cut(s)	146, 152, 234, 547, 1129, 1193
BspCNI	CTCAG	4 cut(s)	346, 763, 1362, 1402
BspFNI	CGCG	1 cut(s)	143
BspLI	GGNNCC	2 cut(s)	409, 561
BspOI	GCTAGC	1 cut(s)	779
BspPI	GGATC	3 cut(s)	327, 402, 415
BspT107I	GGYRCC	1 cut(s)	559
BspTI	CTTAAG	1 cut(s)	1376
BsrBI	CCGCTC	2 cut(s)	35, 544
BsrGI	TGTACA	1 cut(s)	528
BsrI	ACTGG	4 cut(s)	235, 716, 865, 1020
BssECI	CCNNGG	2 cut(s)	147, 1227
BssMI	GATC	5 cut(s)	319, 407, 694, 1095, 1493
BssNI	GRCGYC	1 cut(s)	560
BssT1I	CCWWGG	1 cut(s)	1227
Bst4CI	ACNGT	4 cut(s)	184, 315, 381, 422
Bst6I	CTCTTC	2 cut(s)	438, 672
BstACI	GRCGYC	1 cut(s)	560
BstAFI	CTTAAG	1 cut(s)	1376
BstAPI	GCANNNNNTGC	1 cut(s)	383
BstAUI	TGTACA	1 cut(s)	528
BstBAI	YACGTR	1 cut(s)	1055
BstC8I	GCNNGC	1 cut(s)	777
BstDEI	CTNAG	6 cut(s)	354, 771, 1064, 1113, 1349, 1410
BstDSI	CCRYGG	1 cut(s)	147
BstF5I	GGATG	8 cut(s)	24, 273, 481, 630, 1111, 1177, 1237, 1243
BstFNI	CGCG	1 cut(s)	143
BstH2I	RGCGCY	5 cut(s)	208, 461, 563, 782, 823
BstHHI	GCGC	7 cut(s)	143, 207, 460, 562, 754, 781, 822
BstKTI	GATC	5 cut(s)	322, 410, 697, 1098, 1496
BstMAI	GTCTC	2 cut(s)	1254, 1352
BstMBI	GATC	5 cut(s)	319, 407, 694, 1095, 1493
BstMCI	CGRYCG	1 cut(s)	548
BstMWI	GCNNNNNNNGC	7 cut(s)	138, 149, 231, 383, 580, 776, 817
BstNSI	RCATGY	1 cut(s)	1078
BstUI	CGCG	1 cut(s)	143
BstV1I	GCAGC	5 cut(s)	194, 362, 766, 829, 1378
BstV2I	GAAGAC	1 cut(s)	1440
BstX2I	RGATCY	2 cut(s)	319, 407
BstYI	RGATCY	2 cut(s)	319, 407
BstZI	CGGCCG	1 cut(s)	545
BsuRI	GGCC	6 cut(s)	146, 152, 234, 547, 1129, 1193
BtgI	CCRYGG	1 cut(s)	147
BtgZI	GCGATG	1 cut(s)	1103
BtsCI	GGATG	8 cut(s)	24, 273, 481, 630, 1111, 1177, 1237, 1243
BtsIMutI	CAGTG	1 cut(s)	858
Cac8I	GCNNGC	1 cut(s)	777
CfoI	GCGC	7 cut(s)	143, 207, 460, 562, 754, 781, 822
Cfr13I	GGNCC	1 cut(s)	1127
CseI	GACGC	1 cut(s)	1325
Csp6I	GTAC	6 cut(s)	60, 103, 229, 238, 311, 529
CviAII	CATG	5 cut(s)	169, 520, 532, 1075, 1156
CviQI	GTAC	6 cut(s)	60, 103, 229, 238, 311, 529
DdeI	CTNAG	6 cut(s)	354, 771, 1064, 1113, 1349, 1410
DinI	GGCGCC	1 cut(s)	561
DpnI	GATC	5 cut(s)	321, 409, 696, 1097, 1495
DpnII	GATC	5 cut(s)	319, 407, 694, 1095, 1493
EaeI	YGGCCR	4 cut(s)	144, 232, 545, 1191
EagI	CGGCCG	1 cut(s)	545
Eam1104I	CTCTTC	2 cut(s)	438, 672
EarI	CTCTTC	2 cut(s)	438, 672
Ecl136II	GAGCTC	2 cut(s)	199, 220
EclXI	CGGCCG	1 cut(s)	545
Eco130I	CCWWGG	1 cut(s)	1227
Eco24I	GRGCYC	2 cut(s)	201, 222
Eco32I	GATATC	1 cut(s)	594
Eco47III	AGCGCT	2 cut(s)	206, 780
Eco52I	CGGCCG	1 cut(s)	545
Eco53kI	GAGCTC	2 cut(s)	199, 220
Eco57I	CTGAAG	3 cut(s)	349, 833, 1352
Eco88I	CYCGRG	3 cut(s)	200, 1143, 1454
EcoICRI	GAGCTC	2 cut(s)	199, 220
EcoO109I	RGGNCCY	1 cut(s)	1127
EcoRV	GATATC	1 cut(s)	594
EcoT14I	CCWWGG	1 cut(s)	1227
EcoT38I	GRGCYC	2 cut(s)	201, 222
EgeI	GGCGCC	1 cut(s)	561
EheI	GGCGCC	1 cut(s)	561
ErhI	CCWWGG	1 cut(s)	1227
Esp3I	CGTCTC	1 cut(s)	1254
FaeI	CATG	5 cut(s)	172, 523, 535, 1078, 1159
FatI	CATG	5 cut(s)	168, 519, 531, 1074, 1155
FauI	CCCGC	3 cut(s)	28, 64, 125
Fnu4HI	GCNGC	9 cut(s)	66, 69, 144, 208, 351, 545, 755, 818, 1392
FokI	GGATG	8 cut(s)	31, 280, 488, 637, 1118, 1184, 1230, 1244
FriOI	GRGCYC	2 cut(s)	201, 222
Fsp4HI	GCNGC	9 cut(s)	66, 69, 144, 208, 351, 545, 755, 818, 1392
FspBI	CTAG	4 cut(s)	251, 776, 869, 1388
GlaI	GCGC	7 cut(s)	142, 206, 459, 561, 753, 780, 821
GluI	GCNGC	9 cut(s)	66, 69, 144, 208, 351, 545, 755, 818, 1392
GsuI	CTGGAG	2 cut(s)	1003, 1236
HaeII	RGCGCY	5 cut(s)	208, 461, 563, 782, 823
HaeIII	GGCC	6 cut(s)	146, 152, 234, 547, 1129, 1193
HapII	CCGG	2 cut(s)	106, 548
HgaI	GACGC	1 cut(s)	1325
HhaI	GCGC	7 cut(s)	143, 207, 460, 562, 754, 781, 822
Hin1I	GRCGYC	1 cut(s)	560
Hin1II	CATG	5 cut(s)	172, 523, 535, 1078, 1159
Hin6I	GCGC	7 cut(s)	141, 205, 458, 560, 752, 779, 820
HinP1I	GCGC	7 cut(s)	141, 205, 458, 560, 752, 779, 820
HincII	GTYRAC	1 cut(s)	717
HindII	GTYRAC	1 cut(s)	717
HinfI	GANTC	4 cut(s)	4, 893, 1187, 1327
HpaII	CCGG	2 cut(s)	106, 548
HphI	GGTGA	3 cut(s)	58, 884, 1409
Hpy166II	GTNNAC	2 cut(s)	717, 1162
Hpy188I	TCNGA	6 cut(s)	468, 793, 1222, 1312, 1332, 1422
Hpy8I	GTNNAC	2 cut(s)	717, 1162
Hpy99I	CGWCG	1 cut(s)	31
HpyAV	CCTTC	4 cut(s)	442, 650, 760, 1423
HpyCH4III	ACNGT	4 cut(s)	184, 315, 381, 422
HpyCH4IV	ACGT	2 cut(s)	605, 1054
HpyCH4V	TGCA	6 cut(s)	210, 429, 628, 685, 708, 1268
HpyF10VI	GCNNNNNNNGC	7 cut(s)	138, 149, 231, 383, 580, 776, 817
HpyF3I	CTNAG	6 cut(s)	354, 771, 1064, 1113, 1349, 1410
HpySE526I	ACGT	2 cut(s)	605, 1054
Hsp92I	GRCGYC	1 cut(s)	560
Hsp92II	CATG	5 cut(s)	172, 523, 535, 1078, 1159
HspAI	GCGC	7 cut(s)	141, 205, 458, 560, 752, 779, 820
KasI	GGCGCC	1 cut(s)	559
Kzo9I	GATC	5 cut(s)	319, 407, 694, 1095, 1493
LmnI	GCTCC	7 cut(s)	32, 40, 138, 217, 225, 541, 1022
Lsp1109I	GCAGC	5 cut(s)	194, 362, 766, 829, 1378
LweI	GCATC	6 cut(s)	219, 615, 672, 1096, 1162, 1252
MaeI	CTAG	4 cut(s)	251, 776, 869, 1388
MaeII	ACGT	2 cut(s)	605, 1054
MaeIII	GTNAC	3 cut(s)	83, 359, 611
MalI	GATC	5 cut(s)	321, 409, 696, 1097, 1495
MbiI	CCGCTC	2 cut(s)	35, 544
MboI	GATC	5 cut(s)	319, 407, 694, 1095, 1493
MboII	GAAGA	7 cut(s)	400, 455, 481, 689, 1094, 1126, 1445
MfeI	CAATTG	1 cut(s)	1012
MflI	RGATCY	2 cut(s)	319, 407
MhlI	GDGCHC	2 cut(s)	201, 222
MluCI	AATT	8 cut(s)	282, 370, 395, 1012, 1237, 1342, 1400, 1466
Mly113I	GGCGCC	1 cut(s)	560
MmeI	TCCRAC	3 cut(s)	297, 462, 771
MroXI	GAANNNNTTC	2 cut(s)	1317, 1404
MseI	TTAA	5 cut(s)	510, 783, 1101, 1275, 1377
MslI	CAYNNNNRTG	1 cut(s)	926
MspA1I	CMGCKG	2 cut(s)	353, 811
MspCI	CTTAAG	1 cut(s)	1376
MspI	CCGG	2 cut(s)	106, 548
MunI	CAATTG	1 cut(s)	1012
Mva1269I	GAATGC	2 cut(s)	250, 995
MvnI	CGCG	1 cut(s)	143
MwoI	GCNNNNNNNGC	7 cut(s)	138, 149, 231, 383, 580, 776, 817
NarI	GGCGCC	1 cut(s)	560
NdeII	GATC	5 cut(s)	319, 407, 694, 1095, 1493
NheI	GCTAGC	1 cut(s)	775
NlaIII	CATG	5 cut(s)	172, 523, 535, 1078, 1159
NlaIV	GGNNCC	2 cut(s)	409, 561
NmuCI	GTSAC	1 cut(s)	83
NspI	RCATGY	1 cut(s)	1078
PaeR7I	CTCGAG	2 cut(s)	200, 1143
PciI	ACATGT	1 cut(s)	1074
PctI	GAATGC	2 cut(s)	250, 995
PdmI	GAANNNNTTC	2 cut(s)	1317, 1404
PfeI	GAWTC	4 cut(s)	4, 893, 1187, 1327
Pfl23II	CGTACG	1 cut(s)	310
PkrI	GCNGC	9 cut(s)	67, 70, 145, 209, 352, 546, 756, 819, 1393
PluTI	GGCGCC	1 cut(s)	563
Ppu21I	YACGTR	1 cut(s)	1055
PscI	ACATGT	1 cut(s)	1074
Psp124BI	GAGCTC	2 cut(s)	201, 222
PspLI	CGTACG	1 cut(s)	310
PspN4I	GGNNCC	2 cut(s)	409, 561
PspPI	GGNCC	1 cut(s)	1127
PspXI	VCTCGAGB	1 cut(s)	200
PsuI	RGATCY	2 cut(s)	319, 407
PvuII	CAGCTG	1 cut(s)	353
RsaI	GTAC	6 cut(s)	61, 104, 230, 239, 312, 530
RsaNI	GTAC	6 cut(s)	60, 103, 229, 238, 311, 529
RseI	CAYNNNNRTG	1 cut(s)	926
SacI	GAGCTC	2 cut(s)	201, 222
SaqAI	TTAA	5 cut(s)	510, 783, 1101, 1275, 1377
SatI	GCNGC	9 cut(s)	66, 69, 144, 208, 351, 545, 755, 818, 1392
Sau3AI	GATC	5 cut(s)	319, 407, 694, 1095, 1493
Sau96I	GGNCC	1 cut(s)	1127
SduI	GDGCHC	2 cut(s)	201, 222
SfaNI	GCATC	6 cut(s)	219, 615, 672, 1096, 1162, 1252
SfoI	GGCGCC	1 cut(s)	561
Sfr274I	CTCGAG	2 cut(s)	200, 1143
SlaI	CTCGAG	2 cut(s)	200, 1143
SmiMI	CAYNNNNRTG	1 cut(s)	926
SmlI	CTYRAG	5 cut(s)	200, 899, 1143, 1376, 1460
SmoI	CTYRAG	5 cut(s)	200, 899, 1143, 1376, 1460
Sse9I	AATT	8 cut(s)	282, 370, 395, 1012, 1237, 1342, 1400, 1466
SsiI	CCGC	9 cut(s)	35, 65, 68, 71, 132, 143, 223, 544, 809
SspDI	GGCGCC	1 cut(s)	559
SspMI	CTAG	4 cut(s)	251, 776, 869, 1388
SstI	GAGCTC	2 cut(s)	201, 222
StyI	CCWWGG	1 cut(s)	1227
TaaI	ACNGT	4 cut(s)	184, 315, 381, 422
TaiI	ACGT	2 cut(s)	608, 1057
TaqI	TCGA	3 cut(s)	201, 1144, 1496
TasI	AATT	8 cut(s)	282, 370, 395, 1012, 1237, 1342, 1400, 1466
TatI	WGTACW	1 cut(s)	528
TauI	GCSGC	4 cut(s)	68, 71, 146, 547
TfiI	GAWTC	4 cut(s)	4, 893, 1187, 1327
Tru1I	TTAA	5 cut(s)	510, 783, 1101, 1275, 1377
Tru9I	TTAA	5 cut(s)	510, 783, 1101, 1275, 1377
TscAI	CASTG	1 cut(s)	865
TseFI	GTSAC	1 cut(s)	83
TseI	GCWGC	5 cut(s)	207, 350, 754, 817, 1391
Tsp45I	GTSAC	1 cut(s)	83
TspDTI	ATGAA	6 cut(s)	17, 275, 593, 1095, 1144, 1310
TspGWI	ACGGA	2 cut(s)	420, 1236
TspRI	CASTG	1 cut(s)	865
Vha464I	CTTAAG	1 cut(s)	1376
XapI	RAATTY	1 cut(s)	282
XbaI	TCTAGA	1 cut(s)	250
XceI	RCATGY	1 cut(s)	1078
XcmI	CCANNNNNNNNNTGG	2 cut(s)	499, 1201
XhoI	CTCGAG	2 cut(s)	200, 1143
XmnI	GAANNNNTTC	2 cut(s)	1317, 1404
XspI	CTAG	4 cut(s)	251, 776, 869, 1388

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.