Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0003078

Physical Location & Seq

Genomic Coordinates Reverse (-)

36475230 .. 36484725

Gene Structure 9496 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1286100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGAAGATTTTCTCAGTTGCAGTGGAGGAAGGAAGAGAAGGCAAGGATGGCAAGCCTTCACTCGGTCCAGTGTACCGTAATTTACTCGCCCAAAATGATTTTCCTCCGCTTGATCGCCAAATTAATTCATCTTGGGACCTCTTTAGTCTATCTGTCCAGAAGTATCCTGGAAATCGAATGCTTGGATGGCGTAAAATGGTTGATGGGAAGCCAGGGCCTTACACTTGGAAAACATACAAGGAGGTTTATGACGAAGTTCTGGATGTTGGTTCTGCATTGCGATTATCCGGTGTTGAACCTGGTTCCCGGGTTGGGATTTATGGTGCAAATTGTCCTCAGTGGATTATGGCAATGGAGGCTTGTAATGCTCACAGTTTGATTTGCGTGCCTCTCTACGATACCCTTGGTCCAGGAGCTGTAAACTTTATTATAGATCACGCAGAGCTTGACGTTGTTTTTGTCCAAGATAAGAAAGTGAAAGAACTACTGAAACCTGATTCTACATCTTCTAAACGAATAAAAGTTATGGTCTGCTTCAGTTCAATGACGGATGAAGAGAAGAACAAATCAGTGCAGATTGGGATAAAACCGTACTCATGGAATGAGTTCACGGAGATGGGTAAACAAAATCCGTCGGAGATTGTTCCACCAACGACAGATAATATTGCTGGCATTATGTACACAAGCGGCACCAGCGGAGATCCTAAAGGAGTTGTGATAACACATGAAAATGTTGCATATGGAGTGAGAGGGATTGATCTCTTTATGGAACAATTTGAAGACAAGATGACAGGGGATGATGTCTATCTATCTTTCCTTCCCTTGGCTCATATCCTCGACCGCGTGATTGAGGAGTATTTTTTCCGCAATGGTGCTGCTGTTGGCTATTATCATGGGGATCTTAATGCACTGAGGGATGACATGGTGGAGTTAAAGCCAACGCTTCTTGCTGGGGTACCTCGAGTTTTTGAAAAAATACATGAAGGTATAAAGAAAGCAGTGCTAGAGCTTAATCCAAGAAGAAGGAAGATTTTTGACATTCTATACAAATACAAACTTGCTTGGATGAATAGGGGGTATAAAAACAAATACGCATCGCCCATAGCGGATCTGTTGGCCTTCAGAAAGGTCAAAGCTAGGTTGGGTGGTCAACTTCGACTTATAATATCTGGAGGTGCACCCTTGAGCTCTGAGATCGAAGAATTCTTGCGAGTTACCTGCTGCGCATTCGTAGTCACAGGCTATGGGTTGACAGAAACTATCGGACCGACAACTCTCGGCTTTCCTGACGAAATGTGCATGGTTGGTGCTGTTGGCACCGTATCTGTATACAATGAGATGCGCCTGGAGGAGGTTCCGGAAATGGGCTACAATCCACTTGGGGATCATCCGTGTGGTGAGATATGTGTGAGAGGGAAGACTGTTTTTGCTGGCTACTACAAAAATCCTGAATTAACAAGAGAGGCCATCAAAGATGGCTGGTTCCACACAGGTGACATAGGGGAAATACTTCCGAACGGAGTCATCAAGGTTATCGATAGGAAGAAGAATCTTATCAAACTCTCACAAGGAGAGTATGTTGCACTTGAGTACTTGGAAAATGTTTATGGCGTTGCTTCTATTATTGAAGATATTTGGGTCTACGGAAACAGCTTCAAGTCGATGATTGTTGCAGTGGTGGTACCGGAAGAAGAGACCGCCAAGAAGTGGGCTTATTTGAACGGTCACATGGGTTCCTTTTCGGATCTTTGTTCTCTTGATCAGCTAAAAGATCACATTATGGCTGAGCTTAAGTTAATAGCTGAGAGGAACAAGCTGAGTGGCTTTCAATACATCAAGGGAATCATCATAGAACCTCGGCCCTTCGACATGGAAAGAGACTTGGTGACTGCAACATTGAAGAAGAAACGAAATCACTTGCTCAAGTATTACCAGGTTCAAATTGATCAACTCTACAATACCCTGGATGGAAGAAAATTTAGTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010025 GO:0010143 GO:0010166 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031957 GO:0032787 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

663

Amino Acids

74.5

Weight (kDa)

6.21

Isoelectric Point (pI)

28.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	54 - 480	2.1e-83	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47240 AT2G47240 AT2G47240 AT2G47240 AT2G47245
fragaria_vesca	FvH4_1g26810 FvH4_1g26810 FvH4_1g26810 FvH4_1g26850 FvH4_1g26850 FvH4_1g26850
malus_domestica	MD09G1286100.v1.1
prunus_persica	Prupe.3G007200_v2.0.a1
pyrus_communis	pycom09g19340
rosa_chinensis	RchiOBHm_Chr3g0487031 RchiOBHm_Chr3g0487091
rosa_laevigata	RLG00000023034 RLG00000023036
rosa_multiflora	Rmu_sc0005856.1_g000028
rosa_roxburghii	Rroxscaffold_6G00395190 Rroxscaffold_6G00395220
rosa_rugosa	Rorug03G0230300 Rorug03G0230500 Rorug03G0230600 Rorug03G0230700 Rorug03G0230800 Rorug03G0230900
rosa_samantha	Rh3AG278900 Rh3AG279200 Rh3BG315100 Rh3CG313100 Rh3CG313200 Rh3DG309800 Rh3DG310100
rosa_wichuraiana	Rw0G017060 Rw3G024720 Rw3G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1163
Acc16I	TGCGCA	1 cut(s)	1225
Acc36I	ACCTGC	1 cut(s)	1226
Acc65I	GGTACC	2 cut(s)	955, 1681
AccB1I	GGYRCC	4 cut(s)	689, 955, 1316, 1681
AccB7I	CCANNNNNTGG	1 cut(s)	1707
AccI	GTMKAC	2 cut(s)	1329, 1641
AccII	CGCG	1 cut(s)	843
AccIII	TCCGGA	1 cut(s)	1357
AciI	CCGC	7 cut(s)	107, 687, 696, 841, 865, 1106, 1698
AclWI	GGATC	5 cut(s)	695, 906, 1116, 1392, 1752
AcsI	RAATTY	2 cut(s)	1202, 1976
AcuI	CTGAAG	2 cut(s)	520, 1105
AfaI	GTAC	6 cut(s)	74, 593, 680, 957, 1592, 1683
AfiI	CCNNNNNNNGG	6 cut(s)	62, 312, 823, 1351, 1364, 1707
AflII	CTTAAG	1 cut(s)	1790
AjnI	CCWGG	7 cut(s)	166, 211, 298, 409, 1344, 1932, 1962
AjuI	GAANNNNNNNTTGG	2 cut(s)	84, 116
AleI	CACNNNNGTG	1 cut(s)	1491
Alw21I	GWGCWC	2 cut(s)	1180, 1190
Alw26I	GTCTC	2 cut(s)	1688, 1872
Alw44I	GTGCAC	1 cut(s)	1176
AlwI	GGATC	5 cut(s)	695, 906, 1116, 1392, 1752
AlwNI	CAGNNNCTG	1 cut(s)	416
Ama87I	CYCGRG	2 cut(s)	306, 960
Aor13HI	TCCGGA	1 cut(s)	1357
AoxI	GGCC	4 cut(s)	215, 1116, 1464, 1859
ApaLI	GTGCAC	1 cut(s)	1176
ApeKI	GCWGC	2 cut(s)	875, 1221
ApoI	RAATTY	2 cut(s)	1202, 1976
ArsI	GACNNNNNNTTYG	2 cut(s)	440, 472
AseI	ATTAAT	1 cut(s)	123
Asp700I	GAANNNNTTC	3 cut(s)	8, 605, 1509
Asp718I	GGTACC	2 cut(s)	955, 1681
AspLEI	GCGC	2 cut(s)	1226, 1344
AspS9I	GGNCC	6 cut(s)	65, 136, 215, 407, 1265, 1860
AsuC2I	CCSGG	2 cut(s)	307, 308
AsuHPI	GGTGA	3 cut(s)	1409, 1505, 1897
AvaI	CYCGRG	2 cut(s)	306, 960
AvaII	GGWCC	4 cut(s)	65, 136, 407, 1265
BaeGI	GKGCMC	1 cut(s)	1180
BanI	GGYRCC	4 cut(s)	689, 955, 1316, 1681
BanII	GRGCYC	1 cut(s)	1190
BbsI	GAAGAC	2 cut(s)	786, 1424
Bbv12I	GWGCWC	2 cut(s)	1180, 1190
BbvI	GCAGC	2 cut(s)	862, 1208
BccI	CCATC	7 cut(s)	41, 180, 197, 610, 1469, 1475, 1961
BcgI	CGANNNNNNTGC	2 cut(s)	1200, 1234
BciT130I	CCWGG	7 cut(s)	168, 213, 300, 411, 1346, 1934, 1964
BciVI	GTATCC	1 cut(s)	174
BclI	TGATCA	2 cut(s)	1759, 1945
BcnI	CCSGG	2 cut(s)	307, 308
BcoDI	GTCTC	2 cut(s)	1688, 1872
BfaI	CTAG	2 cut(s)	1004, 1137
BfrI	CTTAAG	1 cut(s)	1790
BfuAI	ACCTGC	1 cut(s)	1226
BfuI	GTATCC	1 cut(s)	174
BisI	GCNGC	3 cut(s)	688, 876, 1222
BlpI	GCTNAGC	1 cut(s)	1785
BlsI	GCNGC	3 cut(s)	689, 877, 1223
BmcAI	AGTACT	1 cut(s)	1592
Bme1390I	CCNGG	9 cut(s)	168, 213, 300, 307, 308, 411, 1346, 1934, 1964
Bme18I	GGWCC	4 cut(s)	65, 136, 407, 1265
BmeT110I	CYCGRG	2 cut(s)	306, 960
BmgT120I	GGNCC	6 cut(s)	65, 136, 215, 407, 1265, 1860
BmiI	GGNNCC	9 cut(s)	137, 304, 691, 957, 1318, 1356, 1484, 1683, 1735
BmrFI	CCNGG	9 cut(s)	168, 213, 300, 307, 308, 411, 1346, 1934, 1964
BmsI	GCATC	2 cut(s)	1103, 1329
BpiI	GAAGAC	2 cut(s)	786, 1424
BpmI	CTGGAG	2 cut(s)	1191, 1367
Bpu1102I	GCTNAGC	1 cut(s)	1785
BpuEI	CTTGAG	3 cut(s)	1204, 1607, 1907
BpuMI	CCSGG	2 cut(s)	307, 308
Bsa29I	ATCGAT	1 cut(s)	1536
BsaBI	GATNNNNATC	1 cut(s)	804
BsaI	GGTCTC	1 cut(s)	1688
BsaJI	CCNNGG	6 cut(s)	212, 306, 403, 822, 1856, 1962
BsaWI	WCCGGW	3 cut(s)	287, 1357, 1684
BsaXI	ACNNNNNCTCC	2 cut(s)	1563, 1593
Bsc4I	CCNNNNNNNGG	6 cut(s)	62, 312, 823, 1351, 1364, 1707
Bse1I	ACTGG	1 cut(s)	68
Bse3DI	GCAATG	3 cut(s)	275, 357, 874
Bse8I	GATNNNNATC	1 cut(s)	804
BseAI	TCCGGA	1 cut(s)	1357
BseBI	CCWGG	7 cut(s)	168, 213, 300, 411, 1346, 1934, 1964
BseCI	ATCGAT	1 cut(s)	1536
BseDI	CCNNGG	6 cut(s)	212, 306, 403, 822, 1856, 1962
BseGI	GGATG	9 cut(s)	52, 191, 268, 556, 802, 922, 1071, 1387, 1972
BseJI	GATNNNNATC	1 cut(s)	804
BseLI	CCNNNNNNNGG	6 cut(s)	62, 312, 823, 1351, 1364, 1707
BseMI	GCAATG	3 cut(s)	275, 357, 874
BseMII	CTCAG	7 cut(s)	27, 350, 902, 1182, 1776, 1794, 1808
BseNI	ACTGG	1 cut(s)	68
BseRI	GAGGAG	2 cut(s)	866, 1364
BseSI	GKGCMC	1 cut(s)	1180
BseXI	GCAGC	2 cut(s)	862, 1208
BseYI	CCCAGC	1 cut(s)	950
BsgI	GTGCAG	1 cut(s)	593
Bsh1236I	CGCG	1 cut(s)	843
Bsh1285I	CGRYCG	1 cut(s)	841
BshFI	GGCC	4 cut(s)	217, 1118, 1466, 1861
BshNI	GGYRCC	4 cut(s)	689, 955, 1316, 1681
BshVI	ATCGAT	1 cut(s)	1536
BsiEI	CGRYCG	1 cut(s)	841
BsiHKAI	GWGCWC	2 cut(s)	1180, 1190
BsiHKCI	CYCGRG	2 cut(s)	306, 960
BsiSI	CCGG	4 cut(s)	288, 307, 1358, 1685
BslFI	GGGAC	1 cut(s)	149
BslI	CCNNNNNNNGG	6 cut(s)	62, 312, 823, 1351, 1364, 1707
BsmAI	GTCTC	2 cut(s)	1688, 1872
BsmFI	GGGAC	1 cut(s)	149
BsmI	GAATGC	2 cut(s)	183, 1226
BsnI	GGCC	4 cut(s)	217, 1118, 1466, 1861
Bso31I	GGTCTC	1 cut(s)	1688
BsoBI	CYCGRG	2 cut(s)	306, 960
Bsp1286I	GDGCHC	2 cut(s)	1180, 1190
Bsp13I	TCCGGA	1 cut(s)	1357
Bsp1407I	TGTACA	1 cut(s)	678
Bsp1720I	GCTNAGC	1 cut(s)	1785
BspACI	CCGC	7 cut(s)	107, 687, 696, 841, 865, 1106, 1698
BspANI	GGCC	4 cut(s)	217, 1118, 1466, 1861
BspCNI	CTCAG	7 cut(s)	26, 349, 903, 1183, 1777, 1795, 1809
BspDI	ATCGAT	1 cut(s)	1536
BspEI	TCCGGA	1 cut(s)	1357
BspFNI	CGCG	1 cut(s)	843
BspLI	GGNNCC	9 cut(s)	137, 304, 691, 957, 1318, 1356, 1484, 1683, 1735
BspMI	ACCTGC	1 cut(s)	1226
BspPI	GGATC	5 cut(s)	695, 906, 1116, 1392, 1752
BspT107I	GGYRCC	4 cut(s)	689, 955, 1316, 1681
BspTI	CTTAAG	1 cut(s)	1790
BspTNI	GGTCTC	1 cut(s)	1688
BsrDI	GCAATG	3 cut(s)	275, 357, 874
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	1 cut(s)	68
BssECI	CCNNGG	6 cut(s)	212, 306, 403, 822, 1856, 1962
BssNAI	GTATAC	1 cut(s)	1330
BssT1I	CCWWGG	2 cut(s)	403, 822
Bst1107I	GTATAC	1 cut(s)	1330
Bst2UI	CCWGG	7 cut(s)	168, 213, 300, 411, 1346, 1934, 1964
Bst4CI	ACNGT	6 cut(s)	77, 374, 591, 1321, 1423, 1724
Bst6I	CTCTTC	3 cut(s)	28, 549, 1686
BstAFI	CTTAAG	1 cut(s)	1790
BstAUI	TGTACA	1 cut(s)	678
BstC8I	GCNNGC	4 cut(s)	53, 386, 670, 1432
BstDEI	CTNAG	7 cut(s)	13, 336, 911, 1191, 1785, 1803, 1817
BstENI	CCTNNNNNAGG	1 cut(s)	1349
BstF5I	GGATG	9 cut(s)	52, 191, 268, 556, 802, 922, 1071, 1387, 1972
BstFNI	CGCG	1 cut(s)	843
BstHHI	GCGC	2 cut(s)	1226, 1344
BstMAI	GTCTC	2 cut(s)	1688, 1872
BstMCI	CGRYCG	1 cut(s)	841
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 187, 356, 365, 693
BstNI	CCWGG	7 cut(s)	168, 213, 300, 411, 1346, 1934, 1964
BstSCI	CCNGG	9 cut(s)	166, 211, 298, 305, 306, 409, 1344, 1932, 1962
BstSLI	GKGCMC	1 cut(s)	1180
BstUI	CGCG	1 cut(s)	843
BstV1I	GCAGC	2 cut(s)	862, 1208
BstV2I	GAAGAC	2 cut(s)	786, 1424
BstX2I	RGATCY	4 cut(s)	700, 898, 1108, 1744
BstYI	RGATCY	4 cut(s)	700, 898, 1108, 1744
BstZ17I	GTATAC	1 cut(s)	1330
Bsu15I	ATCGAT	1 cut(s)	1536
BsuI	GTATCC	1 cut(s)	174
BsuRI	GGCC	4 cut(s)	217, 1118, 1466, 1861
BsuTUI	ATCGAT	1 cut(s)	1536
BtgZI	GCGATG	1 cut(s)	1080
BtsCI	GGATG	9 cut(s)	52, 191, 268, 556, 802, 922, 1071, 1387, 1972
BtsI	GCAGTG	3 cut(s)	27, 1005, 1680
BtsIMutI	CAGTG	7 cut(s)	27, 75, 344, 576, 908, 1005, 1680
BveI	ACCTGC	1 cut(s)	1226
Cac8I	GCNNGC	4 cut(s)	53, 386, 670, 1432
CaiI	CAGNNNCTG	1 cut(s)	416
CfoI	GCGC	2 cut(s)	1226, 1344
Cfr13I	GGNCC	6 cut(s)	65, 136, 215, 407, 1265, 1860
Cfr9I	CCCGGG	1 cut(s)	306
ClaI	ATCGAT	1 cut(s)	1536
CpoI	CGGWCCG	1 cut(s)	1265
CsiI	ACCWGGT	2 cut(s)	298, 1932
Csp6I	GTAC	6 cut(s)	73, 592, 679, 956, 1591, 1682
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CspI	CGGWCCG	1 cut(s)	1265
CviAII	CATG	8 cut(s)	597, 725, 893, 922, 980, 1300, 1729, 1870
CviQI	GTAC	6 cut(s)	73, 592, 679, 956, 1591, 1682
DdeI	CTNAG	7 cut(s)	13, 336, 911, 1191, 1785, 1803, 1817
Eam1104I	CTCTTC	3 cut(s)	28, 549, 1686
EarI	CTCTTC	3 cut(s)	28, 549, 1686
Ecl136II	GAGCTC	1 cut(s)	1188
Eco130I	CCWWGG	2 cut(s)	403, 822
Eco24I	GRGCYC	1 cut(s)	1190
Eco31I	GGTCTC	1 cut(s)	1688
Eco47I	GGWCC	4 cut(s)	65, 136, 407, 1265
Eco53kI	GAGCTC	1 cut(s)	1188
Eco57I	CTGAAG	2 cut(s)	520, 1105
Eco88I	CYCGRG	2 cut(s)	306, 960
EcoICRI	GAGCTC	1 cut(s)	1188
EcoNI	CCTNNNNNAGG	1 cut(s)	1349
EcoO109I	RGGNCCY	2 cut(s)	136, 215
EcoRI	GAATTC	1 cut(s)	1202
EcoRII	CCWGG	7 cut(s)	166, 211, 298, 409, 1344, 1932, 1962
EcoT14I	CCWWGG	2 cut(s)	403, 822
EcoT38I	GRGCYC	1 cut(s)	1190
ErhI	CCWWGG	2 cut(s)	403, 822
FaeI	CATG	8 cut(s)	600, 728, 896, 925, 983, 1303, 1732, 1873
FaqI	GGGAC	1 cut(s)	149
FatI	CATG	8 cut(s)	596, 724, 892, 921, 979, 1299, 1728, 1869
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	2 cut(s)	1759, 1945
FblI	GTMKAC	2 cut(s)	1329, 1641
Fnu4HI	GCNGC	3 cut(s)	688, 876, 1222
FokI	GGATG	9 cut(s)	59, 198, 275, 563, 809, 929, 1078, 1374, 1979
FriOI	GRGCYC	1 cut(s)	1190
Fsp4HI	GCNGC	3 cut(s)	688, 876, 1222
FspBI	CTAG	2 cut(s)	1004, 1137
FspI	TGCGCA	1 cut(s)	1225
GlaI	GCGC	2 cut(s)	1225, 1343
GluI	GCNGC	3 cut(s)	688, 876, 1222
GsaI	CCCAGC	1 cut(s)	954
GsuI	CTGGAG	2 cut(s)	1191, 1367
HaeIII	GGCC	4 cut(s)	217, 1118, 1466, 1861
HapII	CCGG	4 cut(s)	288, 307, 1358, 1685
HhaI	GCGC	2 cut(s)	1226, 1344
Hin1II	CATG	8 cut(s)	600, 728, 896, 925, 983, 1303, 1732, 1873
Hin6I	GCGC	2 cut(s)	1224, 1342
HinP1I	GCGC	2 cut(s)	1224, 1342
HincII	GTYRAC	2 cut(s)	1151, 1251
HindII	GTYRAC	2 cut(s)	1151, 1251
HinfI	GANTC	4 cut(s)	497, 1521, 1549, 1842
HpaII	CCGG	4 cut(s)	288, 307, 1358, 1685
HphI	GGTGA	3 cut(s)	1409, 1505, 1897
Hpy188I	TCNGA	6 cut(s)	637, 1124, 1192, 1265, 1515, 1744
Hpy188III	TCNNGA	7 cut(s)	157, 260, 1170, 1286, 1358, 1448, 1757
Hpy99I	CGWCG	1 cut(s)	637
HpyAV	CCTTC	8 cut(s)	23, 32, 66, 827, 977, 1017, 1129, 1873
HpyCH4III	ACNGT	6 cut(s)	77, 374, 591, 1321, 1423, 1724
HpyCH4IV	ACGT	1 cut(s)	450
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 187, 356, 365, 693
HpyF3I	CTNAG	7 cut(s)	13, 336, 911, 1191, 1785, 1803, 1817
HpySE526I	ACGT	1 cut(s)	450
Hsp92II	CATG	8 cut(s)	600, 728, 896, 925, 983, 1303, 1732, 1873
HspAI	GCGC	2 cut(s)	1224, 1342
Kpn2I	TCCGGA	1 cut(s)	1357
KpnI	GGTACC	2 cut(s)	959, 1685
Ksp22I	TGATCA	2 cut(s)	1759, 1945
LmnI	GCTCC	1 cut(s)	413
Lsp1109I	GCAGC	2 cut(s)	862, 1208
LweI	GCATC	2 cut(s)	1103, 1329
MabI	ACCWGGT	2 cut(s)	298, 1932
MaeI	CTAG	2 cut(s)	1004, 1137
MaeII	ACGT	1 cut(s)	450
MaeIII	GTNAC	5 cut(s)	1213, 1234, 1493, 1724, 1885
MflI	RGATCY	4 cut(s)	700, 898, 1108, 1744
MhlI	GDGCHC	2 cut(s)	1180, 1190
MlyI	GAGTC	1 cut(s)	1530
MmeI	TCCRAC	1 cut(s)	615
MroI	TCCGGA	1 cut(s)	1357
MroXI	GAANNNNTTC	3 cut(s)	8, 605, 1509
MseI	TTAA	8 cut(s)	123, 903, 932, 1011, 1454, 1791, 1796, 1987
MslI	CAYNNNNRTG	4 cut(s)	614, 729, 1392, 1491
MspA1I	CMGCKG	1 cut(s)	696
MspCI	CTTAAG	1 cut(s)	1790
MspI	CCGG	4 cut(s)	288, 307, 1358, 1685
MspR9I	CCNGG	9 cut(s)	168, 213, 300, 307, 308, 411, 1346, 1934, 1964
Mva1269I	GAATGC	2 cut(s)	183, 1226
MvaI	CCWGG	7 cut(s)	168, 213, 300, 411, 1346, 1934, 1964
MvnI	CGCG	1 cut(s)	843
MwoI	GCNNNNNNNGC	5 cut(s)	48, 187, 356, 365, 693
NciI	CCSGG	2 cut(s)	307, 308
NdeI	CATATG	1 cut(s)	739
NlaIII	CATG	8 cut(s)	600, 728, 896, 925, 983, 1303, 1732, 1873
NlaIV	GGNNCC	9 cut(s)	137, 304, 691, 957, 1318, 1356, 1484, 1683, 1735
NmeAIII	GCCGAG	2 cut(s)	1257, 1837
NmuCI	GTSAC	4 cut(s)	1234, 1493, 1724, 1885
NsbI	TGCGCA	1 cut(s)	1225
OliI	CACNNNNGTG	1 cut(s)	1491
PaeR7I	CTCGAG	1 cut(s)	960
PctI	GAATGC	2 cut(s)	183, 1226
PdmI	GAANNNNTTC	3 cut(s)	8, 605, 1509
PfeI	GAWTC	3 cut(s)	497, 1549, 1842
PflMI	CCANNNNNTGG	1 cut(s)	1707
PfoI	TCCNGGA	2 cut(s)	166, 409
PkrI	GCNGC	3 cut(s)	689, 877, 1223
PleI	GAGTC	1 cut(s)	1529
PpsI	GAGTC	1 cut(s)	1529
PpuMI	RGGWCCY	1 cut(s)	136
PshBI	ATTAAT	1 cut(s)	123
PsiI	TTATAA	1 cut(s)	1163
Psp124BI	GAGCTC	1 cut(s)	1190
Psp5II	RGGWCCY	1 cut(s)	136
Psp6I	CCWGG	7 cut(s)	166, 211, 298, 409, 1344, 1932, 1962
PspFI	CCCAGC	1 cut(s)	950
PspGI	CCWGG	7 cut(s)	166, 211, 298, 409, 1344, 1932, 1962
PspN4I	GGNNCC	9 cut(s)	137, 304, 691, 957, 1318, 1356, 1484, 1683, 1735
PspPI	GGNCC	6 cut(s)	65, 136, 215, 407, 1265, 1860
PspPPI	RGGWCCY	1 cut(s)	136
PspXI	VCTCGAGB	1 cut(s)	960
PstNI	CAGNNNCTG	1 cut(s)	416
PsuI	RGATCY	4 cut(s)	700, 898, 1108, 1744
RsaI	GTAC	6 cut(s)	74, 593, 680, 957, 1592, 1683
RsaNI	GTAC	6 cut(s)	73, 592, 679, 956, 1591, 1682
RseI	CAYNNNNRTG	4 cut(s)	614, 729, 1392, 1491
Rsr2I	CGGWCCG	1 cut(s)	1265
RsrII	CGGWCCG	1 cut(s)	1265
SacI	GAGCTC	1 cut(s)	1190
SaqAI	TTAA	8 cut(s)	123, 903, 932, 1011, 1454, 1791, 1796, 1987
SatI	GCNGC	3 cut(s)	688, 876, 1222
Sau96I	GGNCC	6 cut(s)	65, 136, 215, 407, 1265, 1860
ScaI	AGTACT	1 cut(s)	1592
SchI	GAGTC	1 cut(s)	1530
ScrFI	CCNGG	9 cut(s)	168, 213, 300, 307, 308, 411, 1346, 1934, 1964
SduI	GDGCHC	2 cut(s)	1180, 1190
SexAI	ACCWGGT	2 cut(s)	298, 1932
SfaNI	GCATC	2 cut(s)	1103, 1329
Sfr274I	CTCGAG	1 cut(s)	960
SinI	GGWCC	4 cut(s)	65, 136, 407, 1265
SlaI	CTCGAG	1 cut(s)	960
SmaI	CCCGGG	1 cut(s)	308
SmiMI	CAYNNNNRTG	4 cut(s)	614, 729, 1392, 1491
SmlI	CTYRAG	5 cut(s)	960, 1183, 1586, 1790, 1922
SmoI	CTYRAG	5 cut(s)	960, 1183, 1586, 1790, 1922
SsiI	CCGC	7 cut(s)	107, 687, 696, 841, 865, 1106, 1698
SspI	AATATT	1 cut(s)	664
SspMI	CTAG	2 cut(s)	1004, 1137
SstI	GAGCTC	1 cut(s)	1190
StyD4I	CCNGG	9 cut(s)	166, 211, 298, 305, 306, 409, 1344, 1932, 1962
StyI	CCWWGG	2 cut(s)	403, 822
TaaI	ACNGT	6 cut(s)	77, 374, 591, 1321, 1423, 1724
TaiI	ACGT	1 cut(s)	453
TaqI	TCGA	8 cut(s)	175, 837, 961, 1156, 1197, 1536, 1661, 1866
TaqII	GACCGA	2 cut(s)	53, 1282
TatI	WGTACW	2 cut(s)	678, 1590
TauI	GCSGC	1 cut(s)	690
TfiI	GAWTC	3 cut(s)	497, 1549, 1842
Tru1I	TTAA	8 cut(s)	123, 903, 932, 1011, 1454, 1791, 1796, 1987
Tru9I	TTAA	8 cut(s)	123, 903, 932, 1011, 1454, 1791, 1796, 1987
TscAI	CASTG	7 cut(s)	27, 75, 344, 576, 915, 1005, 1680
TseFI	GTSAC	4 cut(s)	1234, 1493, 1724, 1885
TseI	GCWGC	2 cut(s)	875, 1221
Tsp45I	GTSAC	4 cut(s)	1234, 1493, 1724, 1885
TspDTI	ATGAA	6 cut(s)	17, 117, 567, 741, 996, 1082
TspGWI	ACGGA	6 cut(s)	563, 621, 626, 1380, 1533, 1659
TspMI	CCCGGG	1 cut(s)	306
TspRI	CASTG	7 cut(s)	27, 75, 344, 576, 915, 1005, 1680
Van91I	CCANNNNNTGG	1 cut(s)	1707
Vha464I	CTTAAG	1 cut(s)	1790
VneI	GTGCAC	1 cut(s)	1176
VpaK11BI	GGWCC	4 cut(s)	65, 136, 407, 1265
VspI	ATTAAT	1 cut(s)	123
XagI	CCTNNNNNAGG	1 cut(s)	1349
XapI	RAATTY	2 cut(s)	1202, 1976
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XhoI	CTCGAG	1 cut(s)	960
XmaI	CCCGGG	1 cut(s)	306
XmiI	GTMKAC	2 cut(s)	1329, 1641
XmnI	GAANNNNTTC	3 cut(s)	8, 605, 1509
XspI	CTAG	2 cut(s)	1004, 1137
ZrmI	AGTACT	1 cut(s)	1592

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.