Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0003078

Physical Location & Seq

Genomic Coordinates Forward (+)

21273867 .. 21277202

Gene Structure 3336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0230800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3336 bp

ATGCCAACTCTGTTCCTCCATTTCTTCCTCTTCGTAATCACTACCACTGTTACTAACCTCATCCCCACAGTTCACAGCAACTGTATTGAAGCCCAGAAACAATCATTGCTCCATTTCAAACAAAGTCTTGAATTTGATTCTTCCAAATCCTCCAAGCTTATCACATGGAATTCGAGTACCGAATGCTGTTCTTGGCTCGGTGTAACTTTCAGCACTAATGGGAGTGTTGTTGGTCTTGACATCAGCAACGAGTCTATCTCATGCAGCATTGACAATTCAAGCAGTCTCTTCCAACTTCAACGTCTTCAAAGCCTCAATTTGGCCAATAACGACTTCAAAAGCTCTTCAATTCCATCTGCAATTGGAAAGCTTACAAAGTTGAGGTATCTGAATTTAAGAGGTGCTTTTTTTTCTGGGACTATTCCTTCATCTGTTGTTTCTCTTCCCAAACTAGAAATATTAATACTATCCCACAATCGGTTCTCGGGTCAAGTCCCTGAATTTTCCACTACCTCTTCACCCTTACTTGGCACCCTTGATTTGGAAAACAACAATTTGGAAGGACCAATACCAACATCTATCTTCAATCTTCAAGGGCTTCTCAATCTCAATCTTTCTTCAAACAACTTTAGTAGCTTTCCTTTTAATGGTCCTCGGCTGCCCAGAAATCTTTCATCGGTTGATCTTTCCCACAATAGCATGTTGTTTGATTACAATGGCAGTAATTCCTCCTTCCTTCAGATTCGCCACTTGGTATTGGCTTCTAACAAGTTGAGAGCATTCCCGGATTTCTTGAGAAATCAGTCCATATTATACTACTTGGACCTTTCAAACAACCAGATTCAAGGCAAGATACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTGGCAACTCCTTGGCAAGTCTTGAAGCTCCTCTTCCTAATTCCACTTCTACTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGTGAGGTACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTGGCAACTCCTTGGCAAGTCTTGAAGCTCCTCTTCCTAATTCCACTTCTGCTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGTGAGGTACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTGGCAACTCCTTGGCAAGTCTTGAAGCTCCTCTTCCTAATTCCACTTCTGCTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGTGAGGTACCTAATTGGATTTTGAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTGGCAACTCCTTGGCAAGTCTTGAAGCTCCTCTTCCTAATTCCACTTCTGCTTTATCTTCTCTGGACCTTCATTCCAACAAGCTTCAAGGTGAGGTACCTAATTGGATTTTCAGTCTCAAATCTCTTAATTCCCTTGATCTTTCTGGCAACTCCTTGGCAAGTCTTGAAGCTCCTCTTCCTAATTCCACTTCTGCTTTATCTTCTCTGGACCTTCGTTCCAACAAGCTTCAAGGTATCCATTCCTCATATTCCTTCCTTCAGCTTGGTCACTTGGGATTAGCTTCTAACAAGTTGACAACATTCCCAAACTTCTTGAGAAATCAATCCTATCTAACCTACTTGGACATCTCAGACAACCAAATTCAAGGACAGATACCCAATTGGATTTGGAGTTTCAAACTTCAAGAACTAAATCTTTCTTGTAACTCCTTGGAAAGTTTAGAAGCTCCTCTACATAATTCTACCTATGTTCTGTCAAAGGTCGATCTTCATTCAAACCAGCTTCAGGGACATTTCCCCTTCTTCTTAAATAGTAGGTATCTAGATTATTCAAGAAATAATTTCAGCTCTAGTATACCGAGTGACATTGGTGACTTCATTTCTAATGTGTATTACCTTTCTCTTTCAAGCAATAACTTTCACGGGGCCATTCCAAAATCCATATGCAATGCAAGTTGTATTGTTCTTGATCTGTCCAATAATTCCTTGAGTGGAAACATTCCCCAATGCTTGACTCAATCACATCAGCTTTCAGTCATTGATTTGAAGAGAAACAACCTGAGTGGCACAATTCCCGATAATTTTCCCAACATTTGTGGGTTACAAACTCTAGACCTCAGTAACAATCAGATACAAGGCAAGTTTCCAAAATCTCTTGTCAACTGCTCAAAGTTAGAGGTTTCAAACATTGGAAACAATAACATAGCTGATACTTTTCCATGCTTTTTGATGAGCTTATCCACATTGCGTGTCCTTGTTTTGCGGTCCAACAAGTTTTATGGAAGCATTGGATGTCCCAAGACCAATGGCACATGGCCTGTGCTTCAAATAATAGATTTATCTCACAACAATTTTAGTGGTGATATGCCAGGAAGATTGTCTCTAACATGGCAGGCTATGGTGTCTAATAAGGATGATTCTCCAACTAACCTTGGATTTTCTTCTGTGGTGTCTAATAAGGATGATTCTCCAATTAACCTTGGACCTTCTCACCAACTTTCTCCTCATGTCCAGTGCAACAAGGAGCCAACTATTAGAGCATGTTATTCGTACGGTGGAATTTCTAGATCTATAAGAGAAACATATACTGACTTTTATTATAGAGATACAATTACAACTATCATCAAAGGTTCAGAATTGGATGTGGTTAAGATTTTAACTATATTCACCTTGATTGACTACTCCTACAACAAATTCAACGGATCAATACCTGAGGAAATCGGAGAGTTGAAATCACTATATGCCCTCAACTTATCAGGTAATGCTTTCACAGGAAAAATCCCATCATCATTTGGTAAGATGCGGCAATTGGAGTCCTTAGATCTCTCAAATAACCACTTGAGCGGCCAAATTCCCCCCGAGTTTGCAAATCTCAATTTCCTTTCGCACTTGAATGTCTCATACAATCAACTGACGGGAAGGATCCCAACCAACACTCAGTTTTCGACATTTCCAAGCACCTCCTTCGAGGGTAATAAAGGATTGTGGGGGCCTCCTCTGACATCGGATACAGCAATCGTATTGCCACCTCCAAAGTTTAATGGAAGCTCAAGTAATCCGAATTCTGGAGATGAGATTGATTGGAATGTTATCAGTGCTGAAATTGGATTTACATGTGGGTTTGGAATTGCCGTCGGGTCACTTTTGTTTTGCAAGAGATGGAGGAAATGGTACTACAGAGCTATGTTTAACATCCTGTTCAAGATATTCCCTCAGCTGGAACACAGATTTGGTAATCACAGAAGGCATGTTTACATAAATCAAAGGTATTGGAGACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010025 GO:0010143 GO:0010166 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031957 GO:0032787 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

1111

Amino Acids

122.49

Weight (kDa)

7.11

Isoelectric Point (pI)

40.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRRNT_2	PF08263	31 - 69	7.8e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	86 - 161	3.7e-06	Leucine-rich repeat region
LRR_8	PF13855	248 - 305	1.8e-07	Leucine rich repeat
LRR_8	PF13855	390 - 449	2e-07	Leucine rich repeat
LRR_8	PF13855	694 - 753	3.9e-06	Leucine rich repeat
LRR_14	PF23598	920 - 984	2.4e-06	Leucine-rich repeat region
LRR_8	PF13855	930 - 989	1.5e-08	Leucine rich repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47240 AT2G47240 AT2G47240 AT2G47240 AT2G47245
fragaria_vesca	FvH4_1g26810 FvH4_1g26810 FvH4_1g26810 FvH4_1g26850 FvH4_1g26850 FvH4_1g26850
malus_domestica	MD09G1286100.v1.1
prunus_persica	Prupe.3G007200_v2.0.a1
pyrus_communis	pycom09g19340
rosa_chinensis	RchiOBHm_Chr3g0487031 RchiOBHm_Chr3g0487091
rosa_laevigata	RLG00000023034 RLG00000023036
rosa_multiflora	Rmu_sc0005856.1_g000028
rosa_roxburghii	Rroxscaffold_6G00395190 Rroxscaffold_6G00395220
rosa_rugosa	Rorug03G0230300 Rorug03G0230500 Rorug03G0230600 Rorug03G0230700 Rorug03G0230800 Rorug03G0230900
rosa_samantha	Rh3AG278900 Rh3AG279200 Rh3BG315100 Rh3CG313100 Rh3CG313200 Rh3DG309800 Rh3DG310100
rosa_wichuraiana	Rw0G017060 Rw3G024720 Rw3G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	4 cut(s)	997, 1141, 1285, 1429
AccB1I	GGYRCC	5 cut(s)	530, 997, 1141, 1285, 1429
AccBSI	CCGCTC	1 cut(s)	2898
AccI	GTMKAC	1 cut(s)	1909
AciI	CCGC	3 cut(s)	2317, 2857, 2898
AclWI	GGATC	3 cut(s)	2764, 2971, 2984
AcoI	YGGCCR	2 cut(s)	321, 2899
AcsI	RAATTY	9 cut(s)	131, 169, 391, 500, 1695, 2613, 2747, 2904, 3115
AcuI	CTGAAG	3 cut(s)	722, 1577, 1823
AfaI	GTAC	7 cut(s)	178, 999, 1143, 1287, 1431, 2606, 3227
AfiI	CCNNNNNNNGG	8 cut(s)	319, 477, 527, 541, 647, 1840, 3119, 3271
AflIII	ACRYGT	1 cut(s)	3167
AjnI	CCWGG	1 cut(s)	2422
AjuI	GAANNNNNNNTTGG	4 cut(s)	317, 349, 3267, 3299
Alw26I	GTCTC	9 cut(s)	290, 878, 1022, 1166, 1310, 1454, 2439, 2956, 3322
AlwI	GGATC	3 cut(s)	2764, 2971, 2984
AlwNI	CAGNNNCTG	1 cut(s)	81
Ama87I	CYCGRG	2 cut(s)	484, 2912
AoxI	GGCC	5 cut(s)	321, 1980, 2369, 2899, 3044
ApeKI	GCWGC	2 cut(s)	264, 658
ApoI	RAATTY	9 cut(s)	131, 169, 391, 500, 1695, 2613, 2747, 2904, 3115
AseI	ATTAAT	1 cut(s)	461
Asp700I	GAANNNNTTC	1 cut(s)	670
Asp718I	GGTACC	4 cut(s)	997, 1141, 1285, 1429
AsuC2I	CCSGG	1 cut(s)	785
AsuHPI	GGTGA	9 cut(s)	510, 1004, 1148, 1292, 1436, 1937, 2426, 2537, 2713
AvaI	CYCGRG	2 cut(s)	484, 2912
AxyI	CCTNAGG	1 cut(s)	2766
BalI	TGGCCA	1 cut(s)	323
BamHI	GGATCC	1 cut(s)	2976
BanI	GGYRCC	5 cut(s)	530, 997, 1141, 1285, 1429
BarI	GAAGNNNNNNTAC	4 cut(s)	552, 584, 1770, 1802
BbsI	GAAGAC	1 cut(s)	296
BbvCI	CCTCAGC	1 cut(s)	3267
BbvI	GCAGC	2 cut(s)	276, 645
BccI	CCATC	3 cut(s)	361, 2845, 3207
BceAI	ACGGC	1 cut(s)	3170
BcgI	CGANNNNNNTGC	4 cut(s)	2583, 2617, 3001, 3035
BciT130I	CCWGG	1 cut(s)	2424
BciVI	GTATCC	2 cut(s)	1580, 3055
BcnI	CCSGG	1 cut(s)	785
BcoDI	GTCTC	9 cut(s)	290, 878, 1022, 1166, 1310, 1454, 2439, 2956, 3322
BfaI	CTAG	5 cut(s)	452, 1877, 1905, 2165, 2619
BfmI	CTRYAG	1 cut(s)	3229
BfuI	GTATCC	2 cut(s)	1580, 3055
BglII	AGATCT	2 cut(s)	2621, 2875
BisI	GCNGC	4 cut(s)	265, 659, 2858, 2899
BlsI	GCNGC	4 cut(s)	266, 660, 2859, 2900
Bme1390I	CCNGG	2 cut(s)	785, 2424
BmeT110I	CYCGRG	2 cut(s)	484, 2912
BmiI	GGNNCC	9 cut(s)	532, 999, 1143, 1287, 1431, 1981, 2580, 2978, 3045
BmrFI	CCNGG	2 cut(s)	785, 2424
BmsI	GCATC	1 cut(s)	2844
BpiI	GAAGAC	1 cut(s)	296
BplI	GAGNNNNNCTC	2 cut(s)	242, 274
BpmI	CTGGAG	1 cut(s)	3141
Bpu10I	CCTNAGC	1 cut(s)	3267
BpuEI	CTTGAG	5 cut(s)	814, 1669, 2062, 2914, 3088
BpuMI	CCSGG	1 cut(s)	785
BsaJI	CCNNGG	9 cut(s)	653, 912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
Bsc4I	CCNNNNNNNGG	8 cut(s)	319, 477, 527, 541, 647, 1840, 3119, 3271
Bse1I	ACTGG	1 cut(s)	2566
Bse21I	CCTNAGG	1 cut(s)	2766
Bse3DI	GCAATG	3 cut(s)	104, 2008, 2297
BseBI	CCWGG	1 cut(s)	2424
BseDI	CCNNGG	9 cut(s)	653, 912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
BseGI	GGATG	6 cut(s)	60, 2351, 2473, 2521, 2701, 3246
BseLI	CCNNNNNNNGG	8 cut(s)	319, 477, 527, 541, 647, 1840, 3119, 3271
BseMI	GCAATG	3 cut(s)	104, 2008, 2297
BseMII	CTCAG	6 cut(s)	1698, 2105, 2185, 2757, 3005, 3281
BseNI	ACTGG	1 cut(s)	2566
BseRI	GAGGAG	8 cut(s)	921, 1065, 1209, 1353, 1497, 1773, 2547, 3039
BseXI	GCAGC	2 cut(s)	276, 645
BshFI	GGCC	5 cut(s)	323, 1982, 2371, 2901, 3046
BshNI	GGYRCC	5 cut(s)	530, 997, 1141, 1285, 1429
BsiHKCI	CYCGRG	2 cut(s)	484, 2912
BsiSI	CCGG	1 cut(s)	785
BsiWI	CGTACG	1 cut(s)	2604
BslFI	GGGAC	4 cut(s)	430, 479, 1857, 2334
BslI	CCNNNNNNNGG	8 cut(s)	319, 477, 527, 541, 647, 1840, 3119, 3271
BsmAI	GTCTC	9 cut(s)	290, 878, 1022, 1166, 1310, 1454, 2439, 2956, 3322
BsmBI	CGTCTC	1 cut(s)	3322
BsmFI	GGGAC	4 cut(s)	430, 479, 1857, 2334
BsmI	GAATGC	2 cut(s)	188, 779
BsnI	GGCC	5 cut(s)	323, 1982, 2371, 2901, 3046
BsoBI	CYCGRG	2 cut(s)	484, 2912
BspACI	CCGC	3 cut(s)	2317, 2857, 2898
BspANI	GGCC	5 cut(s)	323, 1982, 2371, 2901, 3046
BspCNI	CTCAG	6 cut(s)	1697, 2106, 2184, 2758, 3004, 3280
BspLI	GGNNCC	9 cut(s)	532, 999, 1143, 1287, 1431, 1981, 2580, 2978, 3045
BspPI	GGATC	3 cut(s)	2764, 2971, 2984
BspQI	GCTCTTC	1 cut(s)	349
BspT107I	GGYRCC	5 cut(s)	530, 997, 1141, 1285, 1429
BsrBI	CCGCTC	1 cut(s)	2898
BsrDI	GCAATG	3 cut(s)	104, 2008, 2297
BsrI	ACTGG	1 cut(s)	2566
BssECI	CCNNGG	9 cut(s)	653, 912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
BssNAI	GTATAC	1 cut(s)	1910
BssT1I	CCWWGG	8 cut(s)	912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
Bst1107I	GTATAC	1 cut(s)	1910
Bst2UI	CCWGG	1 cut(s)	2424
Bst4CI	ACNGT	4 cut(s)	49, 70, 83, 2609
BstC8I	GCNNGC	1 cut(s)	2448
BstDEI	CTNAG	7 cut(s)	1684, 2114, 2171, 2766, 2872, 2991, 3267
BstF5I	GGATG	6 cut(s)	60, 2351, 2473, 2521, 2701, 3246
BstMAI	GTCTC	9 cut(s)	290, 878, 1022, 1166, 1310, 1454, 2439, 2956, 3322
BstNI	CCWGG	1 cut(s)	2424
BstNSI	RCATGY	4 cut(s)	703, 2598, 3171, 3305
BstSCI	CCNGG	2 cut(s)	783, 2422
BstSFI	CTRYAG	1 cut(s)	3229
BstV1I	GCAGC	2 cut(s)	276, 645
BstV2I	GAAGAC	1 cut(s)	296
BstX2I	RGATCY	3 cut(s)	2621, 2875, 2976
BstYI	RGATCY	3 cut(s)	2621, 2875, 2976
BstZ17I	GTATAC	1 cut(s)	1910
Bsu36I	CCTNAGG	1 cut(s)	2766
BsuI	GTATCC	2 cut(s)	1580, 3055
BsuRI	GGCC	5 cut(s)	323, 1982, 2371, 2901, 3046
BtsCI	GGATG	6 cut(s)	60, 2351, 2473, 2521, 2701, 3246
BtsIMutI	CAGTG	3 cut(s)	45, 2573, 3154
Cac8I	GCNNGC	1 cut(s)	2448
CaiI	CAGNNNCTG	1 cut(s)	81
Csp6I	GTAC	7 cut(s)	177, 998, 1142, 1286, 1430, 2605, 3226
CspCI	CAANNNNNGTGG	6 cut(s)	2098, 2131, 2133, 2166, 2392, 2427
CviQI	GTAC	7 cut(s)	177, 998, 1142, 1286, 1430, 2605, 3226
DdeI	CTNAG	7 cut(s)	1684, 2114, 2171, 2766, 2872, 2991, 3267
EaeI	YGGCCR	2 cut(s)	321, 2899
Eco130I	CCWWGG	8 cut(s)	912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
Eco57I	CTGAAG	3 cut(s)	722, 1577, 1823
Eco81I	CCTNAGG	1 cut(s)	2766
Eco88I	CYCGRG	2 cut(s)	484, 2912
EcoO109I	RGGNCCY	1 cut(s)	3044
EcoRI	GAATTC	2 cut(s)	169, 3115
EcoRII	CCWGG	1 cut(s)	2422
EcoT14I	CCWWGG	8 cut(s)	912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
ErhI	CCWWGG	8 cut(s)	912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
Esp3I	CGTCTC	1 cut(s)	3322
FaqI	GGGAC	4 cut(s)	430, 479, 1857, 2334
FauNDI	CATATG	1 cut(s)	1997
FblI	GTMKAC	1 cut(s)	1909
Fnu4HI	GCNGC	4 cut(s)	265, 659, 2858, 2899
FokI	GGATG	6 cut(s)	47, 2358, 2480, 2528, 2708, 3233
Fsp4HI	GCNGC	4 cut(s)	265, 659, 2858, 2899
FspBI	CTAG	5 cut(s)	452, 1877, 1905, 2165, 2619
GluI	GCNGC	4 cut(s)	265, 659, 2858, 2899
GsuI	CTGGAG	1 cut(s)	3141
HaeIII	GGCC	5 cut(s)	323, 1982, 2371, 2901, 3046
HapII	CCGG	1 cut(s)	785
HincII	GTYRAC	2 cut(s)	1629, 2215
HindII	GTYRAC	2 cut(s)	1629, 2215
HindIII	AAGCTT	7 cut(s)	155, 368, 983, 1127, 1271, 1415, 1559
HpaII	CCGG	1 cut(s)	785
HphI	GGTGA	9 cut(s)	510, 1004, 1148, 1292, 1436, 1937, 2426, 2537, 2713
Hpy166II	GTNNAC	5 cut(s)	73, 1629, 1910, 2215, 3307
Hpy188I	TCNGA	9 cut(s)	390, 741, 1687, 2184, 2689, 2777, 3054, 3061, 3114
Hpy8I	GTNNAC	5 cut(s)	73, 1629, 1910, 2215, 3307
Hpy99I	CGWCG	1 cut(s)	3191
HpyCH4III	ACNGT	4 cut(s)	49, 70, 83, 2609
HpyCH4IV	ACGT	2 cut(s)	301, 3331
HpyCH4V	TGCA	7 cut(s)	264, 359, 2001, 2006, 2571, 2921, 3207
HpyF3I	CTNAG	7 cut(s)	1684, 2114, 2171, 2766, 2872, 2991, 3267
HpySE526I	ACGT	2 cut(s)	301, 3331
KpnI	GGTACC	4 cut(s)	1001, 1145, 1289, 1433
LguI	GCTCTTC	1 cut(s)	349
LmnI	GCTCC	8 cut(s)	114, 934, 1078, 1222, 1366, 1510, 1786, 2578
Lsp1109I	GCAGC	2 cut(s)	276, 645
LweI	GCATC	1 cut(s)	2844
MaeI	CTAG	5 cut(s)	452, 1877, 1905, 2165, 2619
MaeII	ACGT	2 cut(s)	301, 3331
MaeIII	GTNAC	9 cut(s)	49, 202, 1601, 1757, 1916, 1925, 2154, 2174, 3192
MbiI	CCGCTC	1 cut(s)	2898
MfeI	CAATTG	3 cut(s)	360, 1714, 2861
MflI	RGATCY	3 cut(s)	2621, 2875, 2976
MlsI	TGGCCA	1 cut(s)	323
MluNI	TGGCCA	1 cut(s)	323
MlyI	GAGTC	7 cut(s)	260, 880, 1024, 1168, 1312, 2062, 2876
MmeI	TCCRAC	8 cut(s)	316, 1002, 1146, 1290, 1434, 1578, 2346, 2501
Mox20I	TGGCCA	1 cut(s)	323
MroXI	GAANNNNTTC	1 cut(s)	670
MscI	TGGCCA	1 cut(s)	323
MslI	CAYNNNNRTG	1 cut(s)	2946
Msp20I	TGGCCA	1 cut(s)	323
MspA1I	CMGCKG	1 cut(s)	3271
MspI	CCGG	1 cut(s)	785
MspR9I	CCNGG	2 cut(s)	785, 2424
MunI	CAATTG	3 cut(s)	360, 1714, 2861
Mva1269I	GAATGC	2 cut(s)	188, 779
MvaI	CCWGG	1 cut(s)	2424
NciI	CCSGG	1 cut(s)	785
NdeI	CATATG	1 cut(s)	1997
NlaIV	GGNNCC	9 cut(s)	532, 999, 1143, 1287, 1431, 1981, 2580, 2978, 3045
NmeAIII	GCCGAG	1 cut(s)	634
NmuCI	GTSAC	4 cut(s)	1601, 1916, 1925, 3192
NspI	RCATGY	4 cut(s)	703, 2598, 3171, 3305
PciI	ACATGT	1 cut(s)	3167
PciSI	GCTCTTC	1 cut(s)	349
PctI	GAATGC	2 cut(s)	188, 779
PdmI	GAANNNNTTC	1 cut(s)	670
PfeI	GAWTC	5 cut(s)	137, 742, 841, 2471, 2519
Pfl23II	CGTACG	1 cut(s)	2604
PfoI	TCCNGGA	1 cut(s)	783
PkrI	GCNGC	4 cut(s)	266, 660, 2859, 2900
PleI	GAGTC	7 cut(s)	259, 879, 1023, 1167, 1311, 2062, 2875
PpsI	GAGTC	7 cut(s)	259, 879, 1023, 1167, 1311, 2062, 2875
PscI	ACATGT	1 cut(s)	3167
PshBI	ATTAAT	1 cut(s)	461
Psp6I	CCWGG	1 cut(s)	2422
PspGI	CCWGG	1 cut(s)	2422
PspLI	CGTACG	1 cut(s)	2604
PspN4I	GGNNCC	9 cut(s)	532, 999, 1143, 1287, 1431, 1981, 2580, 2978, 3045
PstNI	CAGNNNCTG	1 cut(s)	81
PsuI	RGATCY	3 cut(s)	2621, 2875, 2976
PvuII	CAGCTG	1 cut(s)	3271
RsaI	GTAC	7 cut(s)	178, 999, 1143, 1287, 1431, 2606, 3227
RsaNI	GTAC	7 cut(s)	177, 998, 1142, 1286, 1430, 2605, 3226
RseI	CAYNNNNRTG	1 cut(s)	2946
SapI	GCTCTTC	1 cut(s)	349
SatI	GCNGC	4 cut(s)	265, 659, 2858, 2899
SchI	GAGTC	7 cut(s)	260, 880, 1024, 1168, 1312, 2062, 2876
ScrFI	CCNGG	2 cut(s)	785, 2424
SfaNI	GCATC	1 cut(s)	2844
SfcI	CTRYAG	1 cut(s)	3229
SmiMI	CAYNNNNRTG	1 cut(s)	2946
SmlI	CTYRAG	5 cut(s)	793, 1648, 2041, 2893, 3103
SmoI	CTYRAG	5 cut(s)	793, 1648, 2041, 2893, 3103
SsiI	CCGC	3 cut(s)	2317, 2857, 2898
SspI	AATATT	1 cut(s)	459
SspMI	CTAG	5 cut(s)	452, 1877, 1905, 2165, 2619
StyD4I	CCNGG	2 cut(s)	783, 2422
StyI	CCWWGG	8 cut(s)	912, 1056, 1200, 1344, 1488, 1764, 2485, 2533
TaaI	ACNGT	4 cut(s)	49, 70, 83, 2609
TaiI	ACGT	2 cut(s)	304, 3334
TaqI	TCGA	4 cut(s)	173, 1818, 2999, 3021
TauI	GCSGC	2 cut(s)	2860, 2901
TfiI	GAWTC	5 cut(s)	137, 742, 841, 2471, 2519
TscAI	CASTG	3 cut(s)	52, 2573, 3154
TseFI	GTSAC	4 cut(s)	1601, 1916, 1925, 3192
TseI	GCWGC	2 cut(s)	264, 658
Tsp45I	GTSAC	4 cut(s)	1601, 1916, 1925, 3192
TspDTI	ATGAA	8 cut(s)	417, 663, 962, 1106, 1250, 1394, 1814, 1921
TspGWI	ACGGA	1 cut(s)	2769
TspRI	CASTG	3 cut(s)	52, 2573, 3154
VspI	ATTAAT	1 cut(s)	461
XapI	RAATTY	9 cut(s)	131, 169, 391, 500, 1695, 2613, 2747, 2904, 3115
XbaI	TCTAGA	3 cut(s)	1876, 2164, 2618
XceI	RCATGY	4 cut(s)	703, 2598, 3171, 3305
XmiI	GTMKAC	1 cut(s)	1909
XmnI	GAANNNNTTC	1 cut(s)	670
XspI	CTAG	5 cut(s)	452, 1877, 1905, 2165, 2619

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.