Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr3

Orthogroup ID

OG0003078

Physical Location & Seq

Genomic Coordinates Forward (+)

32146808 .. 32151378

Gene Structure 4571 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw3G024750.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGAAGATTTTCTCTGCTCAAGTTGAGGAAGGAAGGGAAGGCCAGAATGGCAAGCCTTCCGTTGGTCCGGTATACCGGAATTTACTGTCCAAAAACAATTTTCCTCCACCTCATCCCGATATAAGTACAGGCTGGGATCTCATTAGTCAATCTGCTCGGAAGTATCCTGGAAATCGAATGCTTGGATGGCGTAAAATAGTTGATGGAAAGATTGGACCTTACGTTTGGAAAACATACAAGGAGGTTTATGACGAACTTCTTCTTGTTGGTTCTGCATTACGAGCATCTGGTGTGGAACCAGGTTCCCGGATTGGAATCTATGGTTCAAATTGCCCCCAGTGGATTATGGCAATGGCGGCTTGTTGTGCTCATAGTTTGATCTGTGTGCCTCTCTATGATACCCTAGGGCCAGGAGCTGTAAATTTTATCATAGATCATGCCGAGGTTGATGTTGTTTTTGTCCAAGATAAGAAAGTGAAAGAACTACTGAAGCCTGAATGTACATCCATTCAAAGATTAAAAGTTATGGTTTGCTTCACTTCATTGACAGATGAAGAGAAGGATAAGGCAGCGCACATTGGGATAAAACCATACTCATGGAATGAGTTCACAGAGATGGGAATTCAAAACCCATCAAAGATCTTTCCACCTCTACCTGAGAATATCAGCACAATTATGTACACAAGTGGTACCAGTGGAGCTCCTAAAGGTGTTGTGATAACACATGAAAACATGGCATATGGTGTCAGAGGCATTGACCTCTTTTTGGAACAATTTGAAGACAAGATGACAGTGGATGATGTGTATCTATCTTTCCTTCCTCTGGCTCATATCCTGGACTGCGTAATTGAGATGTATTTTTTCCGCAATGGTGCTTCTGTTGGCTACTATCATGGGGATCTTAATGCATTAGGGGATGATATAATGGAGTTGAAGCCAACACTTCTTGCTGGGGTACCTCGAGTCTTCGAGAAAATACATGAAGGTATAAAGAAAGGAGTCCAACAGCTCAATCCAAGGAGGCAGAAGATTTTTGACATTCTCTACAGATACAAACTTGCTTGGATGAACATGGGGTTTAAAAACAAAAACGCCTCACCACTCGCTGATCTGTTAGCCTTCAGAAAGATAAAGAATAGGCTGGGTGGTAGAATTCGTCTTATAATATCAGGAGGTGCACCCTTAAGCTCTGAGATTGAAGAATTCTTGCGAGTTACTTGTTGTTGTTTCGTACTCCAAGGCTATGGGTTGACAGAAACTGTTGGCCCAACTACTCTCGGGTTTCCTGATGAAATGTGCATGATTGGTGCTGTTGGTACCGTATCTGTTTTCAACGAGCTGCGCCTCGAAGAGATTCCAGAAATGGGCTACAATCCACTTGGGGATCCTCCTTGTGGTGAGATATGCTTGAGAGGAAAGACTGTTTTTTCTGGCTATCACAAAAGTCCTGAATTGACAAGAGAAGCAATTAAAGATGGATGGTTCCATACAGGGGACGTAGGGCAAATACTTCCAAATGGAACCATCAAGATCATTGATAGGAAAAAGAATCTGATTAAACTCTCGCAAGGAGAGTATGTTGCACTTGAGTACTTGGAAAATTCGAAGCTTGTTGCCGTGGTGGTAGCAGAAGAAGAAAGCACGAAGAGGTGGGCTTATTTAAATGGTCACGTTGGTTCATTTTCTGATCTTTGTTTTCTTGATCAGCTCAAGAGCCATATCCTGGAAGAACTCAAGTCAACAGCTGAGAAGAACAAGCTGAGAGGTTTCGAGTATATTAAAGGAATCATTGTTGAGCCTCGCCCCTTCGACATGGAAAGAGACATGGTGACTGCAACTTTGAAAAAGAAAAGAAATCAATTGCTCAAGTATTACCAGGCTAGACTTGATGAGCTCTACCAAAATCTGGACGCTGGACGAAAATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010025 GO:0010143 GO:0010166 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031957 GO:0032787 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

642

Amino Acids

72.15

Weight (kDa)

7.49

Isoelectric Point (pI)

31.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	50 - 480	5.2e-83	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47240 AT2G47240 AT2G47240 AT2G47240 AT2G47245
fragaria_vesca	FvH4_1g26810 FvH4_1g26810 FvH4_1g26810 FvH4_1g26850 FvH4_1g26850 FvH4_1g26850
malus_domestica	MD09G1286100.v1.1
prunus_persica	Prupe.3G007200_v2.0.a1
pyrus_communis	pycom09g19340
rosa_chinensis	RchiOBHm_Chr3g0487031 RchiOBHm_Chr3g0487091
rosa_laevigata	RLG00000023034 RLG00000023036
rosa_multiflora	Rmu_sc0005856.1_g000028
rosa_roxburghii	Rroxscaffold_6G00395190 Rroxscaffold_6G00395220
rosa_rugosa	Rorug03G0230300 Rorug03G0230500 Rorug03G0230600 Rorug03G0230700 Rorug03G0230800 Rorug03G0230900
rosa_samantha	Rh3AG278900 Rh3AG279200 Rh3BG315100 Rh3CG313100 Rh3CG313200 Rh3DG309800 Rh3DG310100
rosa_wichuraiana	Rw0G017060 Rw3G024720 Rw3G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1163
Acc65I	GGTACC	3 cut(s)	689, 955, 1316
AccB1I	GGYRCC	3 cut(s)	689, 955, 1316
AccB7I	CCANNNNNTGG	2 cut(s)	1723, 1906
AccI	GTMKAC	1 cut(s)	72
AciI	CCGC	2 cut(s)	356, 865
AclWI	GGATC	4 cut(s)	144, 906, 1379, 1392
AcsI	RAATTY	6 cut(s)	79, 421, 621, 1152, 1202, 1600
AcuI	CTGAAG	2 cut(s)	509, 1105
AfaI	GTAC	8 cut(s)	127, 502, 680, 691, 957, 1233, 1318, 1592
AfiI	CCNNNNNNNGG	8 cut(s)	62, 766, 823, 1364, 1394, 1492, 1723, 1906
AflII	CTTAAG	1 cut(s)	1183
AgsI	TTSAA	8 cut(s)	327, 512, 626, 779, 934, 1199, 1333, 1843
AjnI	CCWGG	6 cut(s)	166, 298, 409, 834, 1722, 1875
Alw21I	GWGCWC	4 cut(s)	370, 703, 1180, 1896
Alw26I	GTCTC	1 cut(s)	1815
Alw44I	GTGCAC	1 cut(s)	1176
AlwI	GGATC	4 cut(s)	144, 906, 1379, 1392
AlwNI	CAGNNNCTG	2 cut(s)	416, 1259
Ama87I	CYCGRG	2 cut(s)	960, 1277
AoxI	GGCC	3 cut(s)	40, 407, 1264
ApaLI	GTGCAC	1 cut(s)	1176
ApeKI	GCWGC	2 cut(s)	569, 1339
ApoI	RAATTY	6 cut(s)	79, 421, 621, 1152, 1202, 1600
ArsI	GACNNNNNNTTYG	4 cut(s)	207, 239, 1822, 1854
Asp700I	GAANNNNTTC	4 cut(s)	8, 258, 605, 1353
Asp718I	GGTACC	3 cut(s)	689, 955, 1316
AspA2I	CCTAGG	1 cut(s)	403
AspLEI	GCGC	2 cut(s)	574, 1344
AspS9I	GGNCC	4 cut(s)	65, 215, 407, 1265
AsuC2I	CCSGG	1 cut(s)	307
AsuHPI	GGTGA	3 cut(s)	1089, 1409, 1840
AsuII	TTCGAA	1 cut(s)	1604
AvaI	CYCGRG	2 cut(s)	960, 1277
AvaII	GGWCC	2 cut(s)	65, 215
AvrII	CCTAGG	1 cut(s)	403
BaeGI	GKGCMC	1 cut(s)	1180
BamHI	GGATCC	1 cut(s)	1384
BanI	GGYRCC	3 cut(s)	689, 955, 1316
BanII	GRGCYC	2 cut(s)	703, 1896
BbsI	GAAGAC	2 cut(s)	786, 958
Bbv12I	GWGCWC	4 cut(s)	370, 703, 1180, 1896
BbvI	GCAGC	2 cut(s)	581, 1326
BccI	CCATC	7 cut(s)	180, 197, 610, 640, 1469, 1473, 1532
BceAI	ACGGC	1 cut(s)	1601
BciT130I	CCWGG	6 cut(s)	168, 300, 411, 836, 1724, 1877
BciVI	GTATCC	1 cut(s)	174
BclI	TGATCA	1 cut(s)	1702
BcnI	CCSGG	1 cut(s)	307
BcoDI	GTCTC	1 cut(s)	1815
BfaI	CTAG	2 cut(s)	404, 1881
BfmI	CTRYAG	1 cut(s)	1045
BfrI	CTTAAG	1 cut(s)	1183
BfuI	GTATCC	1 cut(s)	174
BglI	GCCNNNNNGGC	1 cut(s)	48
BglII	AGATCT	1 cut(s)	639
BisI	GCNGC	3 cut(s)	357, 570, 1340
BlnI	CCTAGG	1 cut(s)	403
BlsI	GCNGC	3 cut(s)	358, 571, 1341
BmcAI	AGTACT	1 cut(s)	1592
Bme1390I	CCNGG	7 cut(s)	168, 300, 307, 411, 836, 1724, 1877
Bme18I	GGWCC	2 cut(s)	65, 215
BmeT110I	CYCGRG	2 cut(s)	960, 1277
BmgT120I	GGNCC	4 cut(s)	65, 215, 407, 1265
BmiI	GGNNCC	8 cut(s)	297, 304, 691, 957, 1318, 1386, 1484, 1522
BmrFI	CCNGG	7 cut(s)	168, 300, 307, 411, 836, 1724, 1877
BmrI	ACTGGG	1 cut(s)	331
BmsI	GCATC	1 cut(s)	293
BmuI	ACTGGG	1 cut(s)	331
BpiI	GAAGAC	2 cut(s)	786, 958
Bpu14I	TTCGAA	1 cut(s)	1604
BpuEI	CTTGAG	5 cut(s)	1429, 1607, 1694, 1718, 1850
BpuMI	CCSGG	1 cut(s)	307
BsaBI	GATNNNNATC	2 cut(s)	314, 804
BsaJI	CCNNGG	5 cut(s)	403, 441, 1016, 1237, 1617
BsaWI	WCCGGW	2 cut(s)	67, 75
BsaXI	ACNNNNNCTCC	2 cut(s)	1563, 1593
Bsc4I	CCNNNNNNNGG	8 cut(s)	62, 766, 823, 1364, 1394, 1492, 1723, 1906
Bse1I	ACTGG	2 cut(s)	337, 693
Bse3DI	GCAATG	2 cut(s)	357, 874
Bse8I	GATNNNNATC	2 cut(s)	314, 804
BseBI	CCWGG	6 cut(s)	168, 300, 411, 836, 1724, 1877
BseDI	CCNNGG	5 cut(s)	403, 441, 1016, 1237, 1617
BseGI	GGATG	7 cut(s)	112, 191, 503, 802, 922, 1071, 1484
BseJI	GATNNNNATC	2 cut(s)	314, 804
BseLI	CCNNNNNNNGG	8 cut(s)	62, 766, 823, 1364, 1394, 1492, 1723, 1906
BseMI	GCAATG	2 cut(s)	357, 874
BseMII	CTCAG	4 cut(s)	648, 1182, 1737, 1751
BseNI	ACTGG	2 cut(s)	337, 693
BseSI	GKGCMC	1 cut(s)	1180
BseXI	GCAGC	2 cut(s)	581, 1326
BseYI	CCCAGC	3 cut(s)	132, 950, 1141
BshFI	GGCC	3 cut(s)	42, 409, 1266
BshNI	GGYRCC	3 cut(s)	689, 955, 1316
BsiHKAI	GWGCWC	4 cut(s)	370, 703, 1180, 1896
BsiHKCI	CYCGRG	2 cut(s)	960, 1277
BsiSI	CCGG	3 cut(s)	68, 76, 307
BslFI	GGGAC	1 cut(s)	1508
BslI	CCNNNNNNNGG	8 cut(s)	62, 766, 823, 1364, 1394, 1492, 1723, 1906
BsmAI	GTCTC	1 cut(s)	1815
BsmFI	GGGAC	1 cut(s)	1508
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	3 cut(s)	42, 409, 1266
BsoBI	CYCGRG	2 cut(s)	960, 1277
Bsp119I	TTCGAA	1 cut(s)	1604
Bsp1286I	GDGCHC	4 cut(s)	370, 703, 1180, 1896
Bsp1407I	TGTACA	2 cut(s)	500, 678
BspACI	CCGC	2 cut(s)	356, 865
BspANI	GGCC	3 cut(s)	42, 409, 1266
BspCNI	CTCAG	4 cut(s)	649, 1183, 1738, 1752
BspLI	GGNNCC	8 cut(s)	297, 304, 691, 957, 1318, 1386, 1484, 1522
BspPI	GGATC	4 cut(s)	144, 906, 1379, 1392
BspT104I	TTCGAA	1 cut(s)	1604
BspT107I	GGYRCC	3 cut(s)	689, 955, 1316
BspTI	CTTAAG	1 cut(s)	1183
BsrDI	GCAATG	2 cut(s)	357, 874
BsrGI	TGTACA	2 cut(s)	500, 678
BsrI	ACTGG	2 cut(s)	337, 693
BssECI	CCNNGG	5 cut(s)	403, 441, 1016, 1237, 1617
BssNAI	GTATAC	1 cut(s)	73
BssT1I	CCWWGG	3 cut(s)	403, 1016, 1237
Bst1107I	GTATAC	1 cut(s)	73
Bst2UI	CCWGG	6 cut(s)	168, 300, 411, 836, 1724, 1877
Bst4CI	ACNGT	5 cut(s)	87, 793, 1261, 1321, 1423
Bst6I	CTCTTC	3 cut(s)	549, 1344, 1640
BstAFI	CTTAAG	1 cut(s)	1183
BstAUI	TGTACA	2 cut(s)	500, 678
BstBI	TTCGAA	1 cut(s)	1604
BstC8I	GCNNGC	1 cut(s)	53
BstDEI	CTNAG	4 cut(s)	657, 1191, 1746, 1760
BstDSI	CCRYGG	1 cut(s)	1617
BstF5I	GGATG	7 cut(s)	112, 191, 503, 802, 922, 1071, 1484
BstHHI	GCGC	2 cut(s)	574, 1344
BstMAI	GTCTC	1 cut(s)	1815
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 187, 281, 356, 365
BstNI	CCWGG	6 cut(s)	168, 300, 411, 836, 1724, 1877
BstSCI	CCNGG	7 cut(s)	166, 298, 305, 409, 834, 1722, 1875
BstSFI	CTRYAG	1 cut(s)	1045
BstSLI	GKGCMC	1 cut(s)	1180
BstV1I	GCAGC	2 cut(s)	581, 1326
BstV2I	GAAGAC	2 cut(s)	786, 958
BstX2I	RGATCY	4 cut(s)	136, 639, 898, 1384
BstXI	CCANNNNNNTGG	2 cut(s)	597, 1244
BstYI	RGATCY	4 cut(s)	136, 639, 898, 1384
BstZ17I	GTATAC	1 cut(s)	73
BsuI	GTATCC	1 cut(s)	174
BsuRI	GGCC	3 cut(s)	42, 409, 1266
BtgI	CCRYGG	1 cut(s)	1617
BtsCI	GGATG	7 cut(s)	112, 191, 503, 802, 922, 1071, 1484
BtsIMutI	CAGTG	3 cut(s)	344, 700, 798
Cac8I	GCNNGC	1 cut(s)	53
CaiI	CAGNNNCTG	2 cut(s)	416, 1259
CfoI	GCGC	2 cut(s)	574, 1344
Cfr13I	GGNCC	4 cut(s)	65, 215, 407, 1265
CseI	GACGC	1 cut(s)	1919
CsiI	ACCWGGT	1 cut(s)	298
Csp6I	GTAC	8 cut(s)	126, 501, 679, 690, 956, 1232, 1317, 1591
CviQI	GTAC	8 cut(s)	126, 501, 679, 690, 956, 1232, 1317, 1591
DdeI	CTNAG	4 cut(s)	657, 1191, 1746, 1760
DraI	TTTAAA	2 cut(s)	1081, 1662
Eam1104I	CTCTTC	3 cut(s)	549, 1344, 1640
EarI	CTCTTC	3 cut(s)	549, 1344, 1640
Ecl136II	GAGCTC	2 cut(s)	701, 1894
Eco130I	CCWWGG	3 cut(s)	403, 1016, 1237
Eco24I	GRGCYC	2 cut(s)	703, 1896
Eco47I	GGWCC	2 cut(s)	65, 215
Eco53kI	GAGCTC	2 cut(s)	701, 1894
Eco57I	CTGAAG	2 cut(s)	509, 1105
Eco88I	CYCGRG	2 cut(s)	960, 1277
EcoICRI	GAGCTC	2 cut(s)	701, 1894
EcoRI	GAATTC	3 cut(s)	621, 1152, 1202
EcoRII	CCWGG	6 cut(s)	166, 298, 409, 834, 1722, 1875
EcoT14I	CCWWGG	3 cut(s)	403, 1016, 1237
EcoT22I	ATGCAT	1 cut(s)	910
EcoT38I	GRGCYC	2 cut(s)	703, 1896
ErhI	CCWWGG	3 cut(s)	403, 1016, 1237
FaqI	GGGAC	1 cut(s)	1508
FauNDI	CATATG	1 cut(s)	739
FbaI	TGATCA	1 cut(s)	1702
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	3 cut(s)	357, 570, 1340
FokI	GGATG	7 cut(s)	99, 198, 490, 809, 929, 1078, 1491
FriOI	GRGCYC	2 cut(s)	703, 1896
Fsp4HI	GCNGC	3 cut(s)	357, 570, 1340
FspBI	CTAG	2 cut(s)	404, 1881
GlaI	GCGC	2 cut(s)	573, 1343
GluI	GCNGC	3 cut(s)	357, 570, 1340
GsaI	CCCAGC	3 cut(s)	136, 954, 1145
HaeIII	GGCC	3 cut(s)	42, 409, 1266
HapII	CCGG	3 cut(s)	68, 76, 307
HgaI	GACGC	1 cut(s)	1919
HhaI	GCGC	2 cut(s)	574, 1344
Hin6I	GCGC	2 cut(s)	572, 1342
HinP1I	GCGC	2 cut(s)	572, 1342
HincII	GTYRAC	2 cut(s)	1251, 1740
HindII	GTYRAC	2 cut(s)	1251, 1740
HindIII	AAGCTT	1 cut(s)	1607
HinfI	GANTC	6 cut(s)	315, 963, 999, 1354, 1549, 1785
HpaII	CCGG	3 cut(s)	68, 76, 307
HphI	GGTGA	3 cut(s)	1089, 1409, 1840
Hpy166II	GTNNAC	6 cut(s)	73, 609, 681, 1178, 1251, 1740
Hpy188I	TCNGA	6 cut(s)	159, 749, 1124, 1192, 1554, 1687
Hpy8I	GTNNAC	6 cut(s)	73, 609, 681, 1178, 1251, 1740
HpyAV	CCTTC	9 cut(s)	23, 27, 32, 66, 553, 827, 977, 1129, 1816
HpyCH4III	ACNGT	5 cut(s)	87, 793, 1261, 1321, 1423
HpyCH4IV	ACGT	3 cut(s)	222, 1497, 1671
HpyCH4V	TGCA	6 cut(s)	275, 908, 1178, 1299, 1583, 1835
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 187, 281, 356, 365
HpyF3I	CTNAG	4 cut(s)	657, 1191, 1746, 1760
HpySE526I	ACGT	3 cut(s)	222, 1497, 1671
HspAI	GCGC	2 cut(s)	572, 1342
KpnI	GGTACC	3 cut(s)	693, 959, 1320
Ksp22I	TGATCA	1 cut(s)	1702
LmnI	GCTCC	3 cut(s)	413, 698, 706
Lsp1109I	GCAGC	2 cut(s)	581, 1326
LweI	GCATC	1 cut(s)	293
MabI	ACCWGGT	1 cut(s)	298
MaeI	CTAG	2 cut(s)	404, 1881
MaeII	ACGT	3 cut(s)	222, 1497, 1671
MaeIII	GTNAC	3 cut(s)	1213, 1667, 1828
MfeI	CAATTG	1 cut(s)	1859
MflI	RGATCY	4 cut(s)	136, 639, 898, 1384
MhlI	GDGCHC	4 cut(s)	370, 703, 1180, 1896
MlyI	GAGTC	2 cut(s)	972, 1008
MmeI	TCCRAC	1 cut(s)	1027
Mph1103I	ATGCAT	1 cut(s)	910
MroXI	GAANNNNTTC	4 cut(s)	8, 258, 605, 1353
MseI	TTAA	8 cut(s)	518, 903, 1080, 1184, 1470, 1557, 1661, 1779
MslI	CAYNNNNRTG	3 cut(s)	595, 614, 674
MspA1I	CMGCKG	1 cut(s)	1745
MspCI	CTTAAG	1 cut(s)	1183
MspI	CCGG	3 cut(s)	68, 76, 307
MspR9I	CCNGG	7 cut(s)	168, 300, 307, 411, 836, 1724, 1877
MunI	CAATTG	1 cut(s)	1859
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	6 cut(s)	168, 300, 411, 836, 1724, 1877
MwoI	GCNNNNNNNGC	5 cut(s)	48, 187, 281, 356, 365
NciI	CCSGG	1 cut(s)	307
NdeI	CATATG	1 cut(s)	739
NlaIV	GGNNCC	8 cut(s)	297, 304, 691, 957, 1318, 1386, 1484, 1522
NmeAIII	GCCGAG	1 cut(s)	466
NmuCI	GTSAC	2 cut(s)	1667, 1828
NsiI	ATGCAT	1 cut(s)	910
NspV	TTCGAA	1 cut(s)	1604
PaeR7I	CTCGAG	1 cut(s)	960
PctI	GAATGC	1 cut(s)	183
PdmI	GAANNNNTTC	4 cut(s)	8, 258, 605, 1353
PfeI	GAWTC	4 cut(s)	315, 1354, 1549, 1785
PflMI	CCANNNNNTGG	2 cut(s)	1723, 1906
PfoI	TCCNGGA	4 cut(s)	166, 305, 834, 1722
PkrI	GCNGC	3 cut(s)	358, 571, 1341
PleI	GAGTC	2 cut(s)	971, 1007
PpsI	GAGTC	2 cut(s)	971, 1007
PsiI	TTATAA	1 cut(s)	1163
Psp124BI	GAGCTC	2 cut(s)	703, 1896
Psp6I	CCWGG	6 cut(s)	166, 298, 409, 834, 1722, 1875
PspFI	CCCAGC	3 cut(s)	132, 950, 1141
PspGI	CCWGG	6 cut(s)	166, 298, 409, 834, 1722, 1875
PspN4I	GGNNCC	8 cut(s)	297, 304, 691, 957, 1318, 1386, 1484, 1522
PspPI	GGNCC	4 cut(s)	65, 215, 407, 1265
PspXI	VCTCGAGB	1 cut(s)	960
PstNI	CAGNNNCTG	2 cut(s)	416, 1259
PsuI	RGATCY	4 cut(s)	136, 639, 898, 1384
PvuII	CAGCTG	1 cut(s)	1745
RsaI	GTAC	8 cut(s)	127, 502, 680, 691, 957, 1233, 1318, 1592
RsaNI	GTAC	8 cut(s)	126, 501, 679, 690, 956, 1232, 1317, 1591
RseI	CAYNNNNRTG	3 cut(s)	595, 614, 674
SacI	GAGCTC	2 cut(s)	703, 1896
SaqAI	TTAA	8 cut(s)	518, 903, 1080, 1184, 1470, 1557, 1661, 1779
SatI	GCNGC	3 cut(s)	357, 570, 1340
Sau96I	GGNCC	4 cut(s)	65, 215, 407, 1265
ScaI	AGTACT	1 cut(s)	1592
SchI	GAGTC	2 cut(s)	972, 1008
ScrFI	CCNGG	7 cut(s)	168, 300, 307, 411, 836, 1724, 1877
SduI	GDGCHC	4 cut(s)	370, 703, 1180, 1896
SexAI	ACCWGGT	1 cut(s)	298
SfaNI	GCATC	1 cut(s)	293
SfcI	CTRYAG	1 cut(s)	1045
Sfr274I	CTCGAG	1 cut(s)	960
SfuI	TTCGAA	1 cut(s)	1604
SinI	GGWCC	2 cut(s)	65, 215
SlaI	CTCGAG	1 cut(s)	960
SmiI	ATTTAAAT	1 cut(s)	1662
SmiMI	CAYNNNNRTG	3 cut(s)	595, 614, 674
SmlI	CTYRAG	8 cut(s)	18, 960, 1183, 1408, 1586, 1709, 1733, 1865
SmoI	CTYRAG	8 cut(s)	18, 960, 1183, 1408, 1586, 1709, 1733, 1865
SsiI	CCGC	2 cut(s)	356, 865
SspI	AATATT	1 cut(s)	1925
SspMI	CTAG	2 cut(s)	404, 1881
SstI	GAGCTC	2 cut(s)	703, 1896
StyD4I	CCNGG	7 cut(s)	166, 298, 305, 409, 834, 1722, 1875
StyI	CCWWGG	3 cut(s)	403, 1016, 1237
SwaI	ATTTAAAT	1 cut(s)	1662
TaaI	ACNGT	5 cut(s)	87, 793, 1261, 1321, 1423
TaiI	ACGT	3 cut(s)	225, 1500, 1674
TaqI	TCGA	7 cut(s)	175, 961, 969, 1347, 1604, 1770, 1809
TatI	WGTACW	4 cut(s)	125, 500, 678, 1590
TauI	GCSGC	1 cut(s)	359
TfiI	GAWTC	4 cut(s)	315, 1354, 1549, 1785
Tru1I	TTAA	8 cut(s)	518, 903, 1080, 1184, 1470, 1557, 1661, 1779
Tru9I	TTAA	8 cut(s)	518, 903, 1080, 1184, 1470, 1557, 1661, 1779
TscAI	CASTG	3 cut(s)	344, 700, 798
TseFI	GTSAC	2 cut(s)	1667, 1828
TseI	GCWGC	2 cut(s)	569, 1339
Tsp45I	GTSAC	2 cut(s)	1667, 1828
TspDTI	ATGAA	8 cut(s)	17, 531, 567, 741, 996, 1082, 1305, 1668
TspGWI	ACGGA	1 cut(s)	49
TspRI	CASTG	3 cut(s)	344, 700, 798
Van91I	CCANNNNNTGG	2 cut(s)	1723, 1906
Vha464I	CTTAAG	1 cut(s)	1183
VneI	GTGCAC	1 cut(s)	1176
VpaK11BI	GGWCC	2 cut(s)	65, 215
XapI	RAATTY	6 cut(s)	79, 421, 621, 1152, 1202, 1600
XhoI	CTCGAG	1 cut(s)	960
XmaJI	CCTAGG	1 cut(s)	403
XmiI	GTMKAC	1 cut(s)	72
XmnI	GAANNNNTTC	4 cut(s)	8, 258, 605, 1353
XspI	CTAG	2 cut(s)	404, 1881
ZrmI	AGTACT	1 cut(s)	1592
Zsp2I	ATGCAT	1 cut(s)	910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.