Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000006

Orthogroup ID

OG0003078

Physical Location & Seq

Genomic Coordinates Reverse (-)

16255874 .. 16261750

Gene Structure 5877 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_6G00395220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGAAGATGTTCTCAGCTCAAGTTGAGGAAGGAAGGAAAGGACAGAACGGGAAGCCTTCAGTTGGTCCAGTGTATCGGAATTTACTTTCAAAAAATGATTTTCCACCGCCTCATCCTGAAATAAGAACAGCTTGGGATGTCTTTAGTCAATCTGCTCAAAAGTTTCCTGGAAATAGAATGCTTGGATGGCGTAAAATTGTGGATGGGAAGATAGGACCTTATGTTTGGAAAACCTACAAGGAGGTTTATGAAGAAGTTCTGCTTGTTGGTTCTGCATTACGAGCATCTGGTGTGAAACCTGGTTCCCGGATTGGAATTTATGGTTCAAATTGCCCTCAATGGATTATGGCAATGGAGGCTTGCAATGCCCATAGTTTGATCTGTGTGCCTCTCTACGATACCCTAGGGCCAGGAGCTGTAAACTTCATCATAGATCATGCAGAGGTTGATGTTGTTTTCGTCCAAGATAAGAAAGTGAAAGAACTATTGAGTCCTGATTGTGCATCTACCCAACGACTAAAAGTTATGGTTTGCTTCACTTCATTGACAGATGAAGAGAAGGATAAAGCAGTGCAGATTGGGATGAAACCGTACTCATGGACTGAGTTCACTGAGATGGGAAAACAAAACCCGTCAGATATTTTTCCACCTCAGCCTGAAACTATCTGTGCAATTATGTACACAAGTGGTACTAGTGGAGATCCTAAAGGTGTTGTGCTAACACATGAAAACACCGCATATGGTGTGAGAGGGATTGACCTCTTTATGGAACAATTTGAAGATAAGATGACAGTGGATGATGTGTATCTATCTTTCCTTCCCCTGGCTCATATTATGGATCGCATAATTGAGGAGTATTTTTTTCGTGCTGGTGCTTCTGTTGGCTACTATCATGGAGATCTTAATGCATTGAGTGATGATATGATGGAGTTAAAGCCAACACTTCTTGCTGGAGTACCTCGTGTTTTCGAAAAAATACATGAAGGTATAAAGCAAGCAGTGCAACAGCTCAATCCCAGGAGGCAGAAGATTTTTGACATTCTCTACAAGTACAAACTTGCTTGGCTGAACATGGGGTTTAAGAGTAAAAATGCCTCACCAATAGCTGATCTGTTGGCCTTCAGAAAGATAAAGAATAGGCTTGGGGGTAAAATTCGACTTATATTATCTGGAGGTGCACCCTTAAGCGCAGAGATTGAAGAATTCTTGCGAGTTACTTGCTGCTGTTTCGTAGTCCAAGGATATGGTTTGACAGAGACTGTTGGGCCAACTACTTTTGGGTATCCTGATGAAATGTGCATGGTTGGTGCTGTTGGTACTGTATCTGTTTTCAACGAGCTGCGCCTCGAAGAGGTTCCTGATATGGGCTACGATCCACTTGGAGATCCTCCTTGTGGTGAGATATGTTTGAGAGGCAAGACTGTTTTTTCTGGTTACCACAAAAGTCCTGAATTGACAAGGGAAGCAATCAAAGATGGCTGGTTCCACACAGGGGACATAGGGCAAATACTTCCAAATGGAACCATCAAGATCATTGATAGGAAAAAGAATCTGATTAAACTCTCACAAGGGGAGTATGTTGCACTTGAGTACTTGGAAAATGTTTATGGCATTTCTTCTGTTATTGATGATATCTGGGTCTACGGAAATAGCTTCAAGTCAAAGCTTGTTGCAGTGGTGGTACCAGAAGAAAAAAGTACCAAAAAGTGGGCTGATTTAAATGGTCACACGGGTTTGTTTTCTGACCTTTGTTCTCTTGATGAGCTCAAGAACCATATTCTGGAAGAGCTCAAGCTAACAGCTGAGAGAAACAAGCTGAGAGGTTTTGAATATATCAAAGGAATCATTATAGAACCTCACCCCTTTGACATAGAAAGGGACCTGGTGACTGCCACTTTGAAGAAGAAAAGAAATCAGTTGCTCAAGTATTACCAGGTTCGACTTGATGAACTCTACCAAAATTTGGATGCCGGACGGAAATACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010025 GO:0010143 GO:0010166 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031957 GO:0032787 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

661

Amino Acids

74.38

Weight (kDa)

6.37

Isoelectric Point (pI)

27.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	49 - 480	7.4e-84	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47240 AT2G47240 AT2G47240 AT2G47240 AT2G47245
fragaria_vesca	FvH4_1g26810 FvH4_1g26810 FvH4_1g26810 FvH4_1g26850 FvH4_1g26850 FvH4_1g26850
malus_domestica	MD09G1286100.v1.1
prunus_persica	Prupe.3G007200_v2.0.a1
pyrus_communis	pycom09g19340
rosa_chinensis	RchiOBHm_Chr3g0487031 RchiOBHm_Chr3g0487091
rosa_laevigata	RLG00000023034 RLG00000023036
rosa_multiflora	Rmu_sc0005856.1_g000028
rosa_roxburghii	Rroxscaffold_6G00395190 Rroxscaffold_6G00395220
rosa_rugosa	Rorug03G0230300 Rorug03G0230500 Rorug03G0230600 Rorug03G0230700 Rorug03G0230800 Rorug03G0230900
rosa_samantha	Rh3AG278900 Rh3AG279200 Rh3BG315100 Rh3CG313100 Rh3CG313200 Rh3DG309800 Rh3DG310100
rosa_wichuraiana	Rw0G017060 Rw3G024720 Rw3G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1681
AccB1I	GGYRCC	1 cut(s)	1681
AccB7I	CCANNNNNTGG	3 cut(s)	1707, 1780, 1963
AccI	GTMKAC	1 cut(s)	1641
AciI	CCGC	2 cut(s)	107, 735
AclWI	GGATC	4 cut(s)	695, 846, 1367, 1379
AcsI	RAATTY	5 cut(s)	79, 315, 1152, 1202, 1960
AcuI	CTGAAG	2 cut(s)	42, 1105
AfaI	GTAC	9 cut(s)	593, 680, 691, 957, 1052, 1318, 1592, 1683, 1699
AflII	CTTAAG	1 cut(s)	1183
AgsI	TTSAA	8 cut(s)	90, 327, 779, 1199, 1333, 1657, 1829, 1900
AhlI	ACTAGT	1 cut(s)	692
AjnI	CCWGG	7 cut(s)	166, 298, 409, 822, 1016, 1881, 1932
Alw21I	GWGCWC	3 cut(s)	1180, 1767, 1791
Alw26I	GTCTC	1 cut(s)	1250
Alw44I	GTGCAC	1 cut(s)	1176
AlwI	GGATC	4 cut(s)	695, 846, 1367, 1379
AlwNI	CAGNNNCTG	2 cut(s)	416, 1259
AoxI	GGCC	3 cut(s)	407, 1116, 1265
ApaLI	GTGCAC	1 cut(s)	1176
ApeKI	GCWGC	2 cut(s)	1221, 1339
ApoI	RAATTY	5 cut(s)	79, 315, 1152, 1202, 1960
ArsI	GACNNNNNNTTYG	4 cut(s)	207, 239, 1879, 1911
Asp700I	GAANNNNTTC	3 cut(s)	8, 255, 1353
Asp718I	GGTACC	1 cut(s)	1681
AspA2I	CCTAGG	1 cut(s)	403
AspLEI	GCGC	2 cut(s)	1190, 1344
AspS9I	GGNCC	5 cut(s)	65, 215, 407, 1265, 1879
AsuC2I	CCSGG	1 cut(s)	307
AsuHPI	GGTGA	4 cut(s)	1089, 1409, 1850, 1897
AsuII	TTCGAA	1 cut(s)	969
AvaII	GGWCC	3 cut(s)	65, 215, 1879
AvrII	CCTAGG	1 cut(s)	403
BaeGI	GKGCMC	1 cut(s)	1180
BanI	GGYRCC	1 cut(s)	1681
BanII	GRGCYC	2 cut(s)	1767, 1791
BauI	CACGAG	1 cut(s)	960
Bbv12I	GWGCWC	3 cut(s)	1180, 1767, 1791
BbvCI	CCTCAGC	1 cut(s)	651
BbvI	GCAGC	2 cut(s)	1208, 1326
BccI	CCATC	6 cut(s)	180, 197, 610, 919, 1469, 1532
BcgI	CGANNNNNNTGC	2 cut(s)	1200, 1234
BciT130I	CCWGG	7 cut(s)	168, 300, 411, 824, 1018, 1883, 1934
BciVI	GTATCC	1 cut(s)	1293
BcnI	CCSGG	1 cut(s)	307
BcoDI	GTCTC	1 cut(s)	1250
BcuI	ACTAGT	1 cut(s)	692
BfaI	CTAG	3 cut(s)	404, 693, 1984
BfrI	CTTAAG	1 cut(s)	1183
BfuI	GTATCC	1 cut(s)	1293
BglII	AGATCT	1 cut(s)	898
BisI	GCNGC	2 cut(s)	1222, 1340
BlnI	CCTAGG	1 cut(s)	403
BlsI	GCNGC	2 cut(s)	1223, 1341
BmcAI	AGTACT	1 cut(s)	1592
Bme1390I	CCNGG	8 cut(s)	168, 300, 307, 411, 824, 1018, 1883, 1934
Bme18I	GGWCC	3 cut(s)	65, 215, 1879
BmgT120I	GGNCC	5 cut(s)	65, 215, 407, 1265, 1879
BmiI	GGNNCC	6 cut(s)	304, 1356, 1484, 1522, 1683, 1880
BmrFI	CCNGG	8 cut(s)	168, 300, 307, 411, 824, 1018, 1883, 1934
BmsI	GCATC	3 cut(s)	293, 512, 1957
BpmI	CTGGAG	2 cut(s)	972, 1191
Bpu10I	CCTNAGC	1 cut(s)	651
Bpu14I	TTCGAA	1 cut(s)	969
BpuEI	CTTGAG	4 cut(s)	1607, 1751, 1775, 1907
BpuMI	CCSGG	1 cut(s)	307
BsaBI	GATNNNNATC	1 cut(s)	804
BsaJI	CCNNGG	4 cut(s)	403, 822, 1016, 1237
Bse1I	ACTGG	1 cut(s)	68
Bse3DI	GCAATG	2 cut(s)	357, 370
Bse8I	GATNNNNATC	1 cut(s)	804
BseBI	CCWGG	7 cut(s)	168, 300, 411, 824, 1018, 1883, 1934
BseDI	CCNNGG	4 cut(s)	403, 822, 1016, 1237
BseGI	GGATG	7 cut(s)	112, 142, 191, 208, 588, 802, 1972
BseJI	GATNNNNATC	1 cut(s)	804
BseMI	GCAATG	2 cut(s)	357, 370
BseMII	CTCAG	6 cut(s)	27, 594, 603, 665, 1794, 1808
BseNI	ACTGG	1 cut(s)	68
BseRI	GAGGAG	1 cut(s)	866
BseSI	GKGCMC	1 cut(s)	1180
BseXI	GCAGC	2 cut(s)	1208, 1326
BsgI	GTGCAG	1 cut(s)	593
BshFI	GGCC	3 cut(s)	409, 1118, 1267
BshNI	GGYRCC	1 cut(s)	1681
BsiHKAI	GWGCWC	3 cut(s)	1180, 1767, 1791
BsiSI	CCGG	2 cut(s)	307, 1971
BslFI	GGGAC	2 cut(s)	1508, 1892
BsmAI	GTCTC	1 cut(s)	1250
BsmFI	GGGAC	2 cut(s)	1508, 1892
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	3 cut(s)	409, 1118, 1267
Bsp119I	TTCGAA	1 cut(s)	969
Bsp1286I	GDGCHC	3 cut(s)	1180, 1767, 1791
Bsp1407I	TGTACA	1 cut(s)	678
Bsp143I	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
BspACI	CCGC	2 cut(s)	107, 735
BspANI	GGCC	3 cut(s)	409, 1118, 1267
BspCNI	CTCAG	6 cut(s)	26, 595, 604, 664, 1795, 1809
BspLI	GGNNCC	6 cut(s)	304, 1356, 1484, 1522, 1683, 1880
BspPI	GGATC	4 cut(s)	695, 846, 1367, 1379
BspQI	GCTCTTC	1 cut(s)	1779
BspT104I	TTCGAA	1 cut(s)	969
BspT107I	GGYRCC	1 cut(s)	1681
BspTI	CTTAAG	1 cut(s)	1183
BsrDI	GCAATG	2 cut(s)	357, 370
BsrGI	TGTACA	1 cut(s)	678
BsrI	ACTGG	1 cut(s)	68
BssECI	CCNNGG	4 cut(s)	403, 822, 1016, 1237
BssMI	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
BssSI	CACGAG	1 cut(s)	960
BssT1I	CCWWGG	2 cut(s)	403, 1237
Bst2BI	CACGAG	1 cut(s)	960
Bst2UI	CCWGG	7 cut(s)	168, 300, 411, 824, 1018, 1883, 1934
Bst4CI	ACNGT	5 cut(s)	591, 793, 1261, 1321, 1423
Bst6I	CTCTTC	3 cut(s)	549, 1344, 1779
BstAFI	CTTAAG	1 cut(s)	1183
BstAPI	GCANNNNNTGC	1 cut(s)	1000
BstAUI	TGTACA	1 cut(s)	678
BstBI	TTCGAA	1 cut(s)	969
BstC8I	GCNNGC	2 cut(s)	361, 996
BstDEI	CTNAG	6 cut(s)	13, 603, 612, 651, 1803, 1817
BstEII	GGTNACC	1 cut(s)	1433
BstENI	CCTNNNNNAGG	1 cut(s)	1349
BstF5I	GGATG	7 cut(s)	112, 142, 191, 208, 588, 802, 1972
BstHHI	GCGC	2 cut(s)	1190, 1344
BstKTI	GATC	9 cut(s)	381, 436, 703, 841, 901, 1111, 1375, 1387, 1533
BstMAI	GTCTC	1 cut(s)	1250
BstMBI	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
BstMWI	GCNNNNNNNGC	5 cut(s)	187, 281, 356, 365, 1000
BstNI	CCWGG	7 cut(s)	168, 300, 411, 824, 1018, 1883, 1934
BstPI	GGTNACC	1 cut(s)	1433
BstSCI	CCNGG	8 cut(s)	166, 298, 305, 409, 822, 1016, 1881, 1932
BstSLI	GKGCMC	1 cut(s)	1180
BstV1I	GCAGC	2 cut(s)	1208, 1326
BstX2I	RGATCY	3 cut(s)	700, 898, 1384
BstXI	CCANNNNNNTGG	1 cut(s)	1244
BstYI	RGATCY	3 cut(s)	700, 898, 1384
BsuI	GTATCC	1 cut(s)	1293
BsuRI	GGCC	3 cut(s)	409, 1118, 1267
BtsCI	GGATG	7 cut(s)	112, 142, 191, 208, 588, 802, 1972
BtsI	GCAGTG	3 cut(s)	576, 1005, 1680
BtsIMutI	CAGTG	6 cut(s)	75, 576, 609, 798, 1005, 1680
Cac8I	GCNNGC	2 cut(s)	361, 996
CaiI	CAGNNNCTG	2 cut(s)	416, 1259
CfoI	GCGC	2 cut(s)	1190, 1344
Cfr13I	GGNCC	5 cut(s)	65, 215, 407, 1265, 1879
CsiI	ACCWGGT	3 cut(s)	298, 1881, 1932
Csp6I	GTAC	9 cut(s)	592, 679, 690, 956, 1051, 1317, 1591, 1682, 1698
CviAII	CATG	7 cut(s)	437, 597, 725, 893, 980, 1072, 1300
CviQI	GTAC	9 cut(s)	592, 679, 690, 956, 1051, 1317, 1591, 1682, 1698
DdeI	CTNAG	6 cut(s)	13, 603, 612, 651, 1803, 1817
DpnI	GATC	9 cut(s)	380, 435, 702, 840, 900, 1110, 1374, 1386, 1532
DpnII	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
DraI	TTTAAA	1 cut(s)	1719
Eam1104I	CTCTTC	3 cut(s)	549, 1344, 1779
EarI	CTCTTC	3 cut(s)	549, 1344, 1779
Ecl136II	GAGCTC	2 cut(s)	1765, 1789
Eco130I	CCWWGG	2 cut(s)	403, 1237
Eco24I	GRGCYC	2 cut(s)	1767, 1791
Eco32I	GATATC	1 cut(s)	1633
Eco47I	GGWCC	3 cut(s)	65, 215, 1879
Eco53kI	GAGCTC	2 cut(s)	1765, 1789
Eco57I	CTGAAG	2 cut(s)	42, 1105
Eco91I	GGTNACC	1 cut(s)	1433
EcoICRI	GAGCTC	2 cut(s)	1765, 1789
EcoNI	CCTNNNNNAGG	1 cut(s)	1349
EcoO109I	RGGNCCY	2 cut(s)	215, 1879
EcoO65I	GGTNACC	1 cut(s)	1433
EcoRI	GAATTC	1 cut(s)	1202
EcoRII	CCWGG	7 cut(s)	166, 298, 409, 822, 1016, 1881, 1932
EcoRV	GATATC	1 cut(s)	1633
EcoT14I	CCWWGG	2 cut(s)	403, 1237
EcoT22I	ATGCAT	1 cut(s)	910
EcoT38I	GRGCYC	2 cut(s)	1767, 1791
ErhI	CCWWGG	2 cut(s)	403, 1237
FaeI	CATG	7 cut(s)	440, 600, 728, 896, 983, 1075, 1303
FalI	AAGNNNNNCTT	4 cut(s)	115, 147, 246, 278
FaqI	GGGAC	2 cut(s)	1508, 1892
FatI	CATG	7 cut(s)	436, 596, 724, 892, 979, 1071, 1299
FauNDI	CATATG	1 cut(s)	739
FblI	GTMKAC	1 cut(s)	1641
Fnu4HI	GCNGC	2 cut(s)	1222, 1340
FokI	GGATG	7 cut(s)	99, 149, 198, 215, 595, 809, 1979
FriOI	GRGCYC	2 cut(s)	1767, 1791
Fsp4HI	GCNGC	2 cut(s)	1222, 1340
FspBI	CTAG	3 cut(s)	404, 693, 1984
GlaI	GCGC	2 cut(s)	1189, 1343
GluI	GCNGC	2 cut(s)	1222, 1340
GsuI	CTGGAG	2 cut(s)	972, 1191
HaeIII	GGCC	3 cut(s)	409, 1118, 1267
HapII	CCGG	2 cut(s)	307, 1971
HhaI	GCGC	2 cut(s)	1190, 1344
Hin1II	CATG	7 cut(s)	440, 600, 728, 896, 983, 1075, 1303
Hin6I	GCGC	2 cut(s)	1188, 1342
HinP1I	GCGC	2 cut(s)	1188, 1342
HindIII	AAGCTT	1 cut(s)	1664
HinfI	GANTC	3 cut(s)	490, 1549, 1842
HpaII	CCGG	2 cut(s)	307, 1971
HphI	GGTGA	4 cut(s)	1089, 1409, 1850, 1897
Hpy166II	GTNNAC	5 cut(s)	421, 609, 681, 1178, 1642
Hpy188I	TCNGA	5 cut(s)	78, 637, 1124, 1554, 1744
Hpy8I	GTNNAC	5 cut(s)	421, 609, 681, 1178, 1642
HpyAV	CCTTC	7 cut(s)	23, 27, 66, 553, 827, 977, 1129
HpyCH4III	ACNGT	5 cut(s)	591, 793, 1261, 1321, 1423
HpyF10VI	GCNNNNNNNGC	5 cut(s)	187, 281, 356, 365, 1000
HpyF3I	CTNAG	6 cut(s)	13, 603, 612, 651, 1803, 1817
Hsp92II	CATG	7 cut(s)	440, 600, 728, 896, 983, 1075, 1303
HspAI	GCGC	2 cut(s)	1188, 1342
KpnI	GGTACC	1 cut(s)	1685
Kzo9I	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
LguI	GCTCTTC	1 cut(s)	1779
LmnI	GCTCC	1 cut(s)	413
Lsp1109I	GCAGC	2 cut(s)	1208, 1326
LweI	GCATC	3 cut(s)	293, 512, 1957
MabI	ACCWGGT	3 cut(s)	298, 1881, 1932
MaeI	CTAG	3 cut(s)	404, 693, 1984
MaeIII	GTNAC	4 cut(s)	1213, 1433, 1724, 1885
MalI	GATC	9 cut(s)	380, 435, 702, 840, 900, 1110, 1374, 1386, 1532
MboI	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
MflI	RGATCY	3 cut(s)	700, 898, 1384
MhlI	GDGCHC	3 cut(s)	1180, 1767, 1791
MlyI	GAGTC	1 cut(s)	499
Mph1103I	ATGCAT	1 cut(s)	910
MroXI	GAANNNNTTC	3 cut(s)	8, 255, 1353
MseI	TTAA	6 cut(s)	903, 932, 1080, 1184, 1557, 1718
MslI	CAYNNNNRTG	1 cut(s)	614
MspA1I	CMGCKG	1 cut(s)	1802
MspCI	CTTAAG	1 cut(s)	1183
MspI	CCGG	2 cut(s)	307, 1971
MspR9I	CCNGG	8 cut(s)	168, 300, 307, 411, 824, 1018, 1883, 1934
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	7 cut(s)	168, 300, 411, 824, 1018, 1883, 1934
MwoI	GCNNNNNNNGC	5 cut(s)	187, 281, 356, 365, 1000
NciI	CCSGG	1 cut(s)	307
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
NlaIII	CATG	7 cut(s)	440, 600, 728, 896, 983, 1075, 1303
NlaIV	GGNNCC	6 cut(s)	304, 1356, 1484, 1522, 1683, 1880
NmuCI	GTSAC	2 cut(s)	1724, 1885
NsiI	ATGCAT	1 cut(s)	910
NspV	TTCGAA	1 cut(s)	969
PciSI	GCTCTTC	1 cut(s)	1779
PctI	GAATGC	1 cut(s)	183
PdmI	GAANNNNTTC	3 cut(s)	8, 255, 1353
PfeI	GAWTC	2 cut(s)	1549, 1842
PflMI	CCANNNNNTGG	3 cut(s)	1707, 1780, 1963
PfoI	TCCNGGA	2 cut(s)	166, 305
PkrI	GCNGC	2 cut(s)	1223, 1341
PleI	GAGTC	1 cut(s)	498
PpsI	GAGTC	1 cut(s)	498
PpuMI	RGGWCCY	2 cut(s)	215, 1879
Psp124BI	GAGCTC	2 cut(s)	1767, 1791
Psp5II	RGGWCCY	2 cut(s)	215, 1879
Psp6I	CCWGG	7 cut(s)	166, 298, 409, 822, 1016, 1881, 1932
PspEI	GGTNACC	1 cut(s)	1433
PspGI	CCWGG	7 cut(s)	166, 298, 409, 822, 1016, 1881, 1932
PspN4I	GGNNCC	6 cut(s)	304, 1356, 1484, 1522, 1683, 1880
PspPI	GGNCC	5 cut(s)	65, 215, 407, 1265, 1879
PspPPI	RGGWCCY	2 cut(s)	215, 1879
PstNI	CAGNNNCTG	2 cut(s)	416, 1259
PsuI	RGATCY	3 cut(s)	700, 898, 1384
PvuII	CAGCTG	1 cut(s)	1802
RsaI	GTAC	9 cut(s)	593, 680, 691, 957, 1052, 1318, 1592, 1683, 1699
RsaNI	GTAC	9 cut(s)	592, 679, 690, 956, 1051, 1317, 1591, 1682, 1698
RseI	CAYNNNNRTG	1 cut(s)	614
SacI	GAGCTC	2 cut(s)	1767, 1791
SapI	GCTCTTC	1 cut(s)	1779
SaqAI	TTAA	6 cut(s)	903, 932, 1080, 1184, 1557, 1718
SatI	GCNGC	2 cut(s)	1222, 1340
Sau3AI	GATC	9 cut(s)	378, 433, 700, 838, 898, 1108, 1372, 1384, 1530
Sau96I	GGNCC	5 cut(s)	65, 215, 407, 1265, 1879
ScaI	AGTACT	1 cut(s)	1592
SchI	GAGTC	1 cut(s)	499
ScrFI	CCNGG	8 cut(s)	168, 300, 307, 411, 824, 1018, 1883, 1934
SduI	GDGCHC	3 cut(s)	1180, 1767, 1791
SexAI	ACCWGGT	3 cut(s)	298, 1881, 1932
SfaNI	GCATC	3 cut(s)	293, 512, 1957
SfuI	TTCGAA	1 cut(s)	969
SinI	GGWCC	3 cut(s)	65, 215, 1879
SmiI	ATTTAAAT	1 cut(s)	1719
SmiMI	CAYNNNNRTG	1 cut(s)	614
SmlI	CTYRAG	6 cut(s)	18, 1183, 1586, 1766, 1790, 1922
SmoI	CTYRAG	6 cut(s)	18, 1183, 1586, 1766, 1790, 1922
SpeI	ACTAGT	1 cut(s)	692
SsiI	CCGC	2 cut(s)	107, 735
SspMI	CTAG	3 cut(s)	404, 693, 1984
SstI	GAGCTC	2 cut(s)	1767, 1791
StyD4I	CCNGG	8 cut(s)	166, 298, 305, 409, 822, 1016, 1881, 1932
StyI	CCWWGG	2 cut(s)	403, 1237
SwaI	ATTTAAAT	1 cut(s)	1719
TaaI	ACNGT	5 cut(s)	591, 793, 1261, 1321, 1423
TaqI	TCGA	4 cut(s)	969, 1156, 1347, 1939
TatI	WGTACW	3 cut(s)	678, 1050, 1590
TfiI	GAWTC	2 cut(s)	1549, 1842
Tru1I	TTAA	6 cut(s)	903, 932, 1080, 1184, 1557, 1718
Tru9I	TTAA	6 cut(s)	903, 932, 1080, 1184, 1557, 1718
TscAI	CASTG	6 cut(s)	75, 576, 616, 798, 1005, 1680
TseFI	GTSAC	2 cut(s)	1724, 1885
TseI	GCWGC	2 cut(s)	1221, 1339
Tsp45I	GTSAC	2 cut(s)	1724, 1885
TspGWI	ACGGA	1 cut(s)	1659
TspRI	CASTG	6 cut(s)	75, 576, 616, 798, 1005, 1680
Van91I	CCANNNNNTGG	3 cut(s)	1707, 1780, 1963
Vha464I	CTTAAG	1 cut(s)	1183
VneI	GTGCAC	1 cut(s)	1176
VpaK11BI	GGWCC	3 cut(s)	65, 215, 1879
XagI	CCTNNNNNAGG	1 cut(s)	1349
XapI	RAATTY	5 cut(s)	79, 315, 1152, 1202, 1960
XmaJI	CCTAGG	1 cut(s)	403
XmiI	GTMKAC	1 cut(s)	1641
XmnI	GAANNNNTTC	3 cut(s)	8, 255, 1353
XspI	CTAG	3 cut(s)	404, 693, 1984
ZrmI	AGTACT	1 cut(s)	1592
Zsp2I	ATGCAT	1 cut(s)	910

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.