Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3C

Orthogroup ID

OG0003078

Physical Location & Seq

Genomic Coordinates Forward (+)

33204402 .. 33231261

Gene Structure 26860 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3CG313200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGAAGATTTTCTCTGCTCAAGTTGAGGAAGGAAGGGAAGGCCAGAATGGCAAGCCTTCCGTTGGTCCGGTATACCGGAATTTACTGTCCAAAAACAATTTTCCTCCACCTCATCCCGATATAAGTACAGGCTGGGATCTCATTAGTCAATCTGCTCAGAAGTATCCTGGAAATCGAATGCTTGGATGGCGTAAAATAGTTGATGGAAAAATTGGACCTTACGTTTGGAAAACATACAAGGAGTTTTATGACGAACTTCTTCTTGTTGGTTCTGCATTACGAGCATCTGGTGTGGAACCAGGTTCCCGGATTGGGATCTATGGTTCAAATTGCCCCCAGTGGATTATGGCAATGGCGGCTTGTTGTGCTCATAGTTTGATCTGTGTGCCTCTCTATGATACCCTAGTTTCTGTTGATGCAGGGCCAGGAGCTGTAAATTTTATCATAGATCATGCAGAGGTTGATGTTGTTTTTGTCCAAGATAAGAAAGTGAAAGAACTACTGAAGCCTGAATGTACATCCATTCAAAGATTAAAAGTTATGGTTTGCTTCACTTCGTTGACAGATGAAGAGAAGGATAAGGCAGCACACATTGGGATAAAACCATACTCATGGAATGAGTTCACAGAGATGGGAATTCAAAACCCATCAAAGATCTTTCCAACTCTGCCTGAGAATATCAGCACAATTATGTACACAAGTGGTACCAGTGGAGCTCCTAAAGGTGTTGTGATAACACATGAAAACATGGCATATGGTGTCAGAGGCATTGACCTCTTTTTGGAACAATTTGAAGACAAGATGACAGTGGATGATGTGTATCTATCTTTCCTTCCTCTGGCTCATATCCTGGACTGCGTAATTGAGATGTATTTTTTCCGCAATGGTGCTTCTGTTGGCTACTATCATGGGGATCTTAATGCATTAGGGGATGATATAATGGAGTTGAAGCCAACACTTCTTGCTGGGGTACCTCGAGTCTTCGAGAAAATACATGAAGGTATAAAGAAAGGAGTCCAACAGCTCAATCCAAGGAGGCAGAAGATTTTTGACATTCTCTACAGATACAAACTTGCTTGGATGAACATGGGGTTTAAAAACAAAAACGCCTCACCACTCGCTGATCTGTTAGCCTTCAGAAAGATAAAGAATAGGCTGGGTGGTAGAATTCGTCTTATAATATCAGGAGGTGCACCCTTAAGCTCTGAGATTGAAGAATTCTTGCGAGTTACTTGCTGTTGTTTCGTACTCCAAGGCTATGGGTTGACAGAAACTGTTGGCCCAACTACTCTCGGGTTTCCTGATGAAATGTGCATGATTGGTGCTGTTGGTACCGTATCTGTTTTCAACGAGCTGCGCCTCGAAGAGGTTCCAGAAATGGGGTACAATCCACTTGGGGATCCTCCTTGTGGTGAGATATGCTTGAGAGGAAAGACTGTTTTTTCTGGCTATCACAAAAGTCCTGAATTGACAAGAGAAGCAATTAAGGATGGATGGTTCCATACAGGGGACGTAGGGCAAATACTTCCAAATGGAACCATCAAGATCATTGATAGGAAAAAGAATCTGATTAAACTCTCGCAAGGAGAGTATGTTGCACTTGAGTACTTGGAAAATGTATATGGCATTTCATCTGTTATTGACGATATCTGGGTATATGGGAATAGCTTCAAGTCGAAGCTTGTTGCCGTGGTGGTAGCAGAAGAAGAAAGCACGAAGAGGTGGGCTTATTTAAATGGTCACGTTGGTTCATTTTCTGATCTTTGTTTTCTTGATCAGCTCAAGAGCCATATCCTGGAAGAACTCAAGTTAACAGCTGAGAAGAACAAGCTGAGAGGTTTCGAGTATATTAAAGGAATCATTGTTGAGCCTCGCCCCTTTGACATGGAAAGAGACATGGTGACTGCAACTTTGAAAAAGAAAAGAAATCAATTGCTCAAGTATTACCAGGCTAGACTTGATGAGCTCTACCAAAATCTGGACGCTGGACGAAAATATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001676 GO:0003674 GO:0003824 GO:0004467 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0006082 GO:0006629 GO:0006631 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0010025 GO:0010143 GO:0010166 GO:0012505 GO:0015645 GO:0016405 GO:0016874 GO:0016877 GO:0016878 GO:0019752 GO:0031957 GO:0032787 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:1901568 GO:1901570 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00061 ko00071 ko01100 ko01212 ko02024 ko03320 ko04146 ko04216 ko04714 ko04920 map00061 map00071 map01100 map01212 map02024 map03320 map04146 map04216 map04714 map04920

Pfam Domains

Protein Families

AMP-binding

Protein Analysis

666

Amino Acids

74.8

Weight (kDa)

6.66

Isoelectric Point (pI)

29.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	50 - 485	1.2e-79	AMP-binding enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003078)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47240 AT2G47240 AT2G47240 AT2G47240 AT2G47245
fragaria_vesca	FvH4_1g26810 FvH4_1g26810 FvH4_1g26810 FvH4_1g26850 FvH4_1g26850 FvH4_1g26850
malus_domestica	MD09G1286100.v1.1
prunus_persica	Prupe.3G007200_v2.0.a1
pyrus_communis	pycom09g19340
rosa_chinensis	RchiOBHm_Chr3g0487031 RchiOBHm_Chr3g0487091
rosa_laevigata	RLG00000023034 RLG00000023036
rosa_multiflora	Rmu_sc0005856.1_g000028
rosa_roxburghii	Rroxscaffold_6G00395190 Rroxscaffold_6G00395220
rosa_rugosa	Rorug03G0230300 Rorug03G0230500 Rorug03G0230600 Rorug03G0230700 Rorug03G0230800 Rorug03G0230900
rosa_samantha	Rh3AG278900 Rh3AG279200 Rh3BG315100 Rh3CG313100 Rh3CG313200 Rh3DG309800 Rh3DG310100
rosa_wichuraiana	Rw0G017060 Rw3G024720 Rw3G024750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1178
Acc65I	GGTACC	3 cut(s)	704, 970, 1331
AccB1I	GGYRCC	3 cut(s)	704, 970, 1331
AccB7I	CCANNNNNTGG	2 cut(s)	1795, 1978
AccI	GTMKAC	1 cut(s)	72
AciI	CCGC	2 cut(s)	356, 880
AclWI	GGATC	5 cut(s)	144, 323, 921, 1394, 1407
AcsI	RAATTY	5 cut(s)	79, 436, 636, 1167, 1217
AcuI	CTGAAG	2 cut(s)	524, 1120
AfaI	GTAC	9 cut(s)	127, 517, 695, 706, 972, 1248, 1333, 1385, 1607
AflII	CTTAAG	1 cut(s)	1198
AgsI	TTSAA	9 cut(s)	327, 527, 641, 794, 949, 1214, 1348, 1672, 1915
AjnI	CCWGG	6 cut(s)	166, 298, 424, 849, 1794, 1947
AloI	GAACNNNNNNTCC	4 cut(s)	307, 339, 1481, 1513
Alw21I	GWGCWC	4 cut(s)	370, 718, 1195, 1968
Alw26I	GTCTC	1 cut(s)	1887
Alw44I	GTGCAC	1 cut(s)	1191
AlwI	GGATC	5 cut(s)	144, 323, 921, 1394, 1407
AlwNI	CAGNNNCTG	2 cut(s)	431, 1274
Ama87I	CYCGRG	2 cut(s)	975, 1292
AoxI	GGCC	3 cut(s)	40, 422, 1279
ApaLI	GTGCAC	1 cut(s)	1191
ApeKI	GCWGC	2 cut(s)	584, 1354
ApoI	RAATTY	5 cut(s)	79, 436, 636, 1167, 1217
ArsI	GACNNNNNNTTYG	4 cut(s)	207, 239, 1894, 1926
Asp700I	GAANNNNTTC	5 cut(s)	8, 258, 620, 1368, 1667
Asp718I	GGTACC	3 cut(s)	704, 970, 1331
AspLEI	GCGC	1 cut(s)	1359
AspS9I	GGNCC	4 cut(s)	65, 215, 422, 1280
AsuC2I	CCSGG	1 cut(s)	307
AsuHPI	GGTGA	3 cut(s)	1104, 1424, 1912
AvaI	CYCGRG	2 cut(s)	975, 1292
AvaII	GGWCC	2 cut(s)	65, 215
BaeGI	GKGCMC	1 cut(s)	1195
BaeI	ACNNNNGTAYC	2 cut(s)	390, 423
BamHI	GGATCC	1 cut(s)	1399
BanI	GGYRCC	3 cut(s)	704, 970, 1331
BanII	GRGCYC	2 cut(s)	718, 1968
BbsI	GAAGAC	2 cut(s)	801, 973
Bbv12I	GWGCWC	4 cut(s)	370, 718, 1195, 1968
BbvI	GCAGC	2 cut(s)	596, 1341
BccI	CCATC	7 cut(s)	180, 197, 625, 655, 1484, 1488, 1547
BceAI	ACGGC	1 cut(s)	1673
BcgI	CGANNNNNNTGC	2 cut(s)	1215, 1249
BciT130I	CCWGG	6 cut(s)	168, 300, 426, 851, 1796, 1949
BciVI	GTATCC	1 cut(s)	174
BclI	TGATCA	1 cut(s)	1774
BcnI	CCSGG	1 cut(s)	307
BcoDI	GTCTC	1 cut(s)	1887
BfaI	CTAG	2 cut(s)	404, 1953
BfmI	CTRYAG	1 cut(s)	1060
BfrI	CTTAAG	1 cut(s)	1198
BfuI	GTATCC	1 cut(s)	174
BglI	GCCNNNNNGGC	1 cut(s)	48
BglII	AGATCT	1 cut(s)	654
BisI	GCNGC	3 cut(s)	357, 585, 1355
BlsI	GCNGC	3 cut(s)	358, 586, 1356
BmcAI	AGTACT	1 cut(s)	1607
Bme1390I	CCNGG	7 cut(s)	168, 300, 307, 426, 851, 1796, 1949
Bme18I	GGWCC	2 cut(s)	65, 215
BmeT110I	CYCGRG	2 cut(s)	975, 1292
BmgT120I	GGNCC	4 cut(s)	65, 215, 422, 1280
BmiI	GGNNCC	9 cut(s)	297, 304, 706, 972, 1333, 1371, 1401, 1499, 1537
BmrFI	CCNGG	7 cut(s)	168, 300, 307, 426, 851, 1796, 1949
BmrI	ACTGGG	1 cut(s)	331
BmsI	GCATC	2 cut(s)	293, 406
BmuI	ACTGGG	1 cut(s)	331
BpiI	GAAGAC	2 cut(s)	801, 973
BpuEI	CTTGAG	5 cut(s)	1444, 1622, 1766, 1790, 1922
BpuMI	CCSGG	1 cut(s)	307
BsaBI	GATNNNNATC	2 cut(s)	314, 819
BsaJI	CCNNGG	3 cut(s)	1031, 1252, 1689
BsaWI	WCCGGW	2 cut(s)	67, 75
BsaXI	ACNNNNNCTCC	2 cut(s)	1578, 1608
Bse1I	ACTGG	2 cut(s)	337, 708
Bse3DI	GCAATG	2 cut(s)	357, 889
Bse8I	GATNNNNATC	2 cut(s)	314, 819
BseBI	CCWGG	6 cut(s)	168, 300, 426, 851, 1796, 1949
BseDI	CCNNGG	3 cut(s)	1031, 1252, 1689
BseGI	GGATG	8 cut(s)	112, 191, 518, 817, 937, 1086, 1495, 1499
BseJI	GATNNNNATC	2 cut(s)	314, 819
BseMI	GCAATG	2 cut(s)	357, 889
BseMII	CTCAG	5 cut(s)	170, 663, 1197, 1809, 1823
BseNI	ACTGG	2 cut(s)	337, 708
BseSI	GKGCMC	1 cut(s)	1195
BseXI	GCAGC	2 cut(s)	596, 1341
BseYI	CCCAGC	3 cut(s)	132, 965, 1156
BshFI	GGCC	3 cut(s)	42, 424, 1281
BshNI	GGYRCC	3 cut(s)	704, 970, 1331
BsiHKAI	GWGCWC	4 cut(s)	370, 718, 1195, 1968
BsiHKCI	CYCGRG	2 cut(s)	975, 1292
BsiSI	CCGG	3 cut(s)	68, 76, 307
BslFI	GGGAC	1 cut(s)	1523
BsmAI	GTCTC	1 cut(s)	1887
BsmFI	GGGAC	1 cut(s)	1523
BsmI	GAATGC	1 cut(s)	183
BsnI	GGCC	3 cut(s)	42, 424, 1281
BsoBI	CYCGRG	2 cut(s)	975, 1292
Bsp1286I	GDGCHC	4 cut(s)	370, 718, 1195, 1968
Bsp1407I	TGTACA	2 cut(s)	515, 693
BspACI	CCGC	2 cut(s)	356, 880
BspANI	GGCC	3 cut(s)	42, 424, 1281
BspCNI	CTCAG	5 cut(s)	169, 664, 1198, 1810, 1824
BspLI	GGNNCC	9 cut(s)	297, 304, 706, 972, 1333, 1371, 1401, 1499, 1537
BspPI	GGATC	5 cut(s)	144, 323, 921, 1394, 1407
BspT107I	GGYRCC	3 cut(s)	704, 970, 1331
BspTI	CTTAAG	1 cut(s)	1198
BsrDI	GCAATG	2 cut(s)	357, 889
BsrGI	TGTACA	2 cut(s)	515, 693
BsrI	ACTGG	2 cut(s)	337, 708
BssECI	CCNNGG	3 cut(s)	1031, 1252, 1689
BssNAI	GTATAC	1 cut(s)	73
BssT1I	CCWWGG	2 cut(s)	1031, 1252
Bst1107I	GTATAC	1 cut(s)	73
Bst2UI	CCWGG	6 cut(s)	168, 300, 426, 851, 1796, 1949
Bst4CI	ACNGT	5 cut(s)	87, 808, 1276, 1336, 1438
Bst6I	CTCTTC	3 cut(s)	564, 1359, 1712
BstAFI	CTTAAG	1 cut(s)	1198
BstAUI	TGTACA	2 cut(s)	515, 693
BstC8I	GCNNGC	1 cut(s)	53
BstDEI	CTNAG	5 cut(s)	156, 672, 1206, 1818, 1832
BstDSI	CCRYGG	1 cut(s)	1689
BstENI	CCTNNNNNAGG	1 cut(s)	1364
BstF5I	GGATG	8 cut(s)	112, 191, 518, 817, 937, 1086, 1495, 1499
BstHHI	GCGC	1 cut(s)	1359
BstMAI	GTCTC	1 cut(s)	1887
BstMWI	GCNNNNNNNGC	5 cut(s)	48, 187, 281, 356, 365
BstNI	CCWGG	6 cut(s)	168, 300, 426, 851, 1796, 1949
BstSCI	CCNGG	7 cut(s)	166, 298, 305, 424, 849, 1794, 1947
BstSFI	CTRYAG	1 cut(s)	1060
BstSLI	GKGCMC	1 cut(s)	1195
BstV1I	GCAGC	2 cut(s)	596, 1341
BstV2I	GAAGAC	2 cut(s)	801, 973
BstX2I	RGATCY	5 cut(s)	136, 315, 654, 913, 1399
BstXI	CCANNNNNNTGG	2 cut(s)	612, 1259
BstYI	RGATCY	5 cut(s)	136, 315, 654, 913, 1399
BstZ17I	GTATAC	1 cut(s)	73
BsuI	GTATCC	1 cut(s)	174
BsuRI	GGCC	3 cut(s)	42, 424, 1281
BtgI	CCRYGG	1 cut(s)	1689
BtsCI	GGATG	8 cut(s)	112, 191, 518, 817, 937, 1086, 1495, 1499
BtsIMutI	CAGTG	3 cut(s)	344, 715, 813
Cac8I	GCNNGC	1 cut(s)	53
CaiI	CAGNNNCTG	2 cut(s)	431, 1274
CfoI	GCGC	1 cut(s)	1359
Cfr13I	GGNCC	4 cut(s)	65, 215, 422, 1280
CseI	GACGC	1 cut(s)	1991
CsiI	ACCWGGT	1 cut(s)	298
Csp6I	GTAC	9 cut(s)	126, 516, 694, 705, 971, 1247, 1332, 1384, 1606
CviQI	GTAC	9 cut(s)	126, 516, 694, 705, 971, 1247, 1332, 1384, 1606
DdeI	CTNAG	5 cut(s)	156, 672, 1206, 1818, 1832
DraI	TTTAAA	2 cut(s)	1096, 1734
Eam1104I	CTCTTC	3 cut(s)	564, 1359, 1712
EarI	CTCTTC	3 cut(s)	564, 1359, 1712
Ecl136II	GAGCTC	2 cut(s)	716, 1966
Eco130I	CCWWGG	2 cut(s)	1031, 1252
Eco24I	GRGCYC	2 cut(s)	718, 1968
Eco32I	GATATC	1 cut(s)	1648
Eco47I	GGWCC	2 cut(s)	65, 215
Eco53kI	GAGCTC	2 cut(s)	716, 1966
Eco57I	CTGAAG	2 cut(s)	524, 1120
Eco88I	CYCGRG	2 cut(s)	975, 1292
EcoICRI	GAGCTC	2 cut(s)	716, 1966
EcoNI	CCTNNNNNAGG	1 cut(s)	1364
EcoRI	GAATTC	3 cut(s)	636, 1167, 1217
EcoRII	CCWGG	6 cut(s)	166, 298, 424, 849, 1794, 1947
EcoRV	GATATC	1 cut(s)	1648
EcoT14I	CCWWGG	2 cut(s)	1031, 1252
EcoT22I	ATGCAT	1 cut(s)	925
EcoT38I	GRGCYC	2 cut(s)	718, 1968
ErhI	CCWWGG	2 cut(s)	1031, 1252
FaqI	GGGAC	1 cut(s)	1523
FauNDI	CATATG	1 cut(s)	754
FbaI	TGATCA	1 cut(s)	1774
FblI	GTMKAC	1 cut(s)	72
Fnu4HI	GCNGC	3 cut(s)	357, 585, 1355
FokI	GGATG	8 cut(s)	99, 198, 505, 824, 944, 1093, 1502, 1506
FriOI	GRGCYC	2 cut(s)	718, 1968
Fsp4HI	GCNGC	3 cut(s)	357, 585, 1355
FspBI	CTAG	2 cut(s)	404, 1953
GlaI	GCGC	1 cut(s)	1358
GluI	GCNGC	3 cut(s)	357, 585, 1355
GsaI	CCCAGC	3 cut(s)	136, 969, 1160
HaeIII	GGCC	3 cut(s)	42, 424, 1281
HapII	CCGG	3 cut(s)	68, 76, 307
HgaI	GACGC	1 cut(s)	1991
HhaI	GCGC	1 cut(s)	1359
Hin6I	GCGC	1 cut(s)	1357
HinP1I	GCGC	1 cut(s)	1357
HincII	GTYRAC	3 cut(s)	561, 1266, 1812
HindII	GTYRAC	3 cut(s)	561, 1266, 1812
HindIII	AAGCTT	1 cut(s)	1679
HinfI	GANTC	4 cut(s)	978, 1014, 1564, 1857
HpaI	GTTAAC	1 cut(s)	1812
HpaII	CCGG	3 cut(s)	68, 76, 307
HphI	GGTGA	3 cut(s)	1104, 1424, 1912
Hpy166II	GTNNAC	7 cut(s)	73, 561, 624, 696, 1193, 1266, 1812
Hpy188I	TCNGA	6 cut(s)	159, 764, 1139, 1207, 1569, 1759
Hpy8I	GTNNAC	7 cut(s)	73, 561, 624, 696, 1193, 1266, 1812
HpyAV	CCTTC	8 cut(s)	23, 27, 32, 66, 568, 842, 992, 1144
HpyCH4III	ACNGT	5 cut(s)	87, 808, 1276, 1336, 1438
HpyCH4IV	ACGT	3 cut(s)	222, 1512, 1743
HpyCH4V	TGCA	8 cut(s)	275, 419, 455, 923, 1193, 1314, 1598, 1907
HpyF10VI	GCNNNNNNNGC	5 cut(s)	48, 187, 281, 356, 365
HpyF3I	CTNAG	5 cut(s)	156, 672, 1206, 1818, 1832
HpySE526I	ACGT	3 cut(s)	222, 1512, 1743
HspAI	GCGC	1 cut(s)	1357
KpnI	GGTACC	3 cut(s)	708, 974, 1335
Ksp22I	TGATCA	1 cut(s)	1774
KspAI	GTTAAC	1 cut(s)	1812
LmnI	GCTCC	3 cut(s)	428, 713, 721
Lsp1109I	GCAGC	2 cut(s)	596, 1341
LweI	GCATC	2 cut(s)	293, 406
MabI	ACCWGGT	1 cut(s)	298
MaeI	CTAG	2 cut(s)	404, 1953
MaeII	ACGT	3 cut(s)	222, 1512, 1743
MaeIII	GTNAC	3 cut(s)	1228, 1739, 1900
MfeI	CAATTG	1 cut(s)	1931
MflI	RGATCY	5 cut(s)	136, 315, 654, 913, 1399
MhlI	GDGCHC	4 cut(s)	370, 718, 1195, 1968
MlyI	GAGTC	2 cut(s)	987, 1023
MmeI	TCCRAC	2 cut(s)	686, 1042
Mph1103I	ATGCAT	1 cut(s)	925
MroXI	GAANNNNTTC	5 cut(s)	8, 258, 620, 1368, 1667
MseI	TTAA	9 cut(s)	533, 918, 1095, 1199, 1485, 1572, 1733, 1811, 1851
MslI	CAYNNNNRTG	3 cut(s)	610, 629, 689
MspA1I	CMGCKG	1 cut(s)	1817
MspCI	CTTAAG	1 cut(s)	1198
MspI	CCGG	3 cut(s)	68, 76, 307
MspR9I	CCNGG	7 cut(s)	168, 300, 307, 426, 851, 1796, 1949
MunI	CAATTG	1 cut(s)	1931
Mva1269I	GAATGC	1 cut(s)	183
MvaI	CCWGG	6 cut(s)	168, 300, 426, 851, 1796, 1949
MwoI	GCNNNNNNNGC	5 cut(s)	48, 187, 281, 356, 365
NciI	CCSGG	1 cut(s)	307
NdeI	CATATG	1 cut(s)	754
NlaIV	GGNNCC	9 cut(s)	297, 304, 706, 972, 1333, 1371, 1401, 1499, 1537
NmuCI	GTSAC	2 cut(s)	1739, 1900
NsiI	ATGCAT	1 cut(s)	925
PaeR7I	CTCGAG	1 cut(s)	975
PctI	GAATGC	1 cut(s)	183
PdmI	GAANNNNTTC	5 cut(s)	8, 258, 620, 1368, 1667
PfeI	GAWTC	2 cut(s)	1564, 1857
PflMI	CCANNNNNTGG	2 cut(s)	1795, 1978
PfoI	TCCNGGA	4 cut(s)	166, 305, 849, 1794
PkrI	GCNGC	3 cut(s)	358, 586, 1356
PleI	GAGTC	2 cut(s)	986, 1022
PpsI	GAGTC	2 cut(s)	986, 1022
PsiI	TTATAA	1 cut(s)	1178
Psp124BI	GAGCTC	2 cut(s)	718, 1968
Psp6I	CCWGG	6 cut(s)	166, 298, 424, 849, 1794, 1947
PspFI	CCCAGC	3 cut(s)	132, 965, 1156
PspGI	CCWGG	6 cut(s)	166, 298, 424, 849, 1794, 1947
PspN4I	GGNNCC	9 cut(s)	297, 304, 706, 972, 1333, 1371, 1401, 1499, 1537
PspPI	GGNCC	4 cut(s)	65, 215, 422, 1280
PspXI	VCTCGAGB	1 cut(s)	975
PstNI	CAGNNNCTG	2 cut(s)	431, 1274
PsuI	RGATCY	5 cut(s)	136, 315, 654, 913, 1399
PvuII	CAGCTG	1 cut(s)	1817
RsaI	GTAC	9 cut(s)	127, 517, 695, 706, 972, 1248, 1333, 1385, 1607
RsaNI	GTAC	9 cut(s)	126, 516, 694, 705, 971, 1247, 1332, 1384, 1606
RseI	CAYNNNNRTG	3 cut(s)	610, 629, 689
SacI	GAGCTC	2 cut(s)	718, 1968
SaqAI	TTAA	9 cut(s)	533, 918, 1095, 1199, 1485, 1572, 1733, 1811, 1851
SatI	GCNGC	3 cut(s)	357, 585, 1355
Sau96I	GGNCC	4 cut(s)	65, 215, 422, 1280
ScaI	AGTACT	1 cut(s)	1607
SchI	GAGTC	2 cut(s)	987, 1023
ScrFI	CCNGG	7 cut(s)	168, 300, 307, 426, 851, 1796, 1949
SduI	GDGCHC	4 cut(s)	370, 718, 1195, 1968
SexAI	ACCWGGT	1 cut(s)	298
SfaNI	GCATC	2 cut(s)	293, 406
SfcI	CTRYAG	1 cut(s)	1060
Sfr274I	CTCGAG	1 cut(s)	975
SinI	GGWCC	2 cut(s)	65, 215
SlaI	CTCGAG	1 cut(s)	975
SmiI	ATTTAAAT	1 cut(s)	1734
SmiMI	CAYNNNNRTG	3 cut(s)	610, 629, 689
SmlI	CTYRAG	8 cut(s)	18, 975, 1198, 1423, 1601, 1781, 1805, 1937
SmoI	CTYRAG	8 cut(s)	18, 975, 1198, 1423, 1601, 1781, 1805, 1937
SsiI	CCGC	2 cut(s)	356, 880
SspI	AATATT	1 cut(s)	1997
SspMI	CTAG	2 cut(s)	404, 1953
SstI	GAGCTC	2 cut(s)	718, 1968
StyD4I	CCNGG	7 cut(s)	166, 298, 305, 424, 849, 1794, 1947
StyI	CCWWGG	2 cut(s)	1031, 1252
SwaI	ATTTAAAT	1 cut(s)	1734
TaaI	ACNGT	5 cut(s)	87, 808, 1276, 1336, 1438
TaiI	ACGT	3 cut(s)	225, 1515, 1746
TaqI	TCGA	6 cut(s)	175, 976, 984, 1362, 1676, 1842
TatI	WGTACW	4 cut(s)	125, 515, 693, 1605
TauI	GCSGC	1 cut(s)	359
TfiI	GAWTC	2 cut(s)	1564, 1857
Tru1I	TTAA	9 cut(s)	533, 918, 1095, 1199, 1485, 1572, 1733, 1811, 1851
Tru9I	TTAA	9 cut(s)	533, 918, 1095, 1199, 1485, 1572, 1733, 1811, 1851
TscAI	CASTG	3 cut(s)	344, 715, 813
TseFI	GTSAC	2 cut(s)	1739, 1900
TseI	GCWGC	2 cut(s)	584, 1354
Tsp45I	GTSAC	2 cut(s)	1739, 1900
TspDTI	ATGAA	8 cut(s)	17, 582, 756, 1011, 1097, 1320, 1620, 1740
TspGWI	ACGGA	1 cut(s)	49
TspRI	CASTG	3 cut(s)	344, 715, 813
Van91I	CCANNNNNTGG	2 cut(s)	1795, 1978
Vha464I	CTTAAG	1 cut(s)	1198
VneI	GTGCAC	1 cut(s)	1191
VpaK11BI	GGWCC	2 cut(s)	65, 215
XagI	CCTNNNNNAGG	1 cut(s)	1364
XapI	RAATTY	5 cut(s)	79, 436, 636, 1167, 1217
XhoI	CTCGAG	1 cut(s)	975
XmiI	GTMKAC	1 cut(s)	72
XmnI	GAANNNNTTC	5 cut(s)	8, 258, 620, 1368, 1667
XspI	CTAG	2 cut(s)	404, 1953
ZrmI	AGTACT	1 cut(s)	1607
Zsp2I	ATGCAT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.