Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0007914

Physical Location & Seq

Genomic Coordinates Forward (+)

37338601 .. 37341374

Gene Structure 2774 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1291400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1350 bp

ATGGAAGAGAGTGAGAGTGAGAGAGTGAGGGAGTTGATAGGGAAAGCAGTGGGCGATTGGGACGACCAAGTGATGACGAGAGCCCGATTCAAGGCGTTTAGCGGGCAGAGATCCGATTGGGAACCCGTTTACTTCTTCTGGAGAGATTTAATCCTCTGCGTCGCTCGCCAGTTGGGCGTTTTCTTCATTTCCCCCTCTCGCCTCAACACCCACTGGTTCAATCGAGGAGGCCTCGCCCCTCTCTGCCTCCCCACAGTTCTGTATGAAATGTATAATGAAGGTGAGGTTGTTCTCAGTGTGGATCTTGTGGACCCCACTGCAGGGCGTCTCTCCAAGATTTTTACCAGACTTTCCAATTCCATGGCAATGCTCAGTAGGACTGGGACCAGGAGGTCCACTCCGGAGCTTCTTATGTCCCAAGATCGTCTCATCCTTACCTCACTTTTGAAGGATAAAGCTGCTCAAGTTGTGAAGCTTTTATCTGAATGCCATTGGACTTCTTCATGCGTCATCACCCTGAAGAAGTTCCAGGACTTATGTGGAGGACCCGATGAAGCTTCAGCGGTCTTGTCTCACTTGGTAGAGCAAGCCAAGGCACGCTATCTCTCTCTTTCCAAGGGAGACCTCATAGAGGGTGTGAAACTTTCCCTCTCAGCATCTTCCTTTCCAAGTATTTCAAGTCTAGATTGTGATGTTCTGCACTTGATTTGGACAACAGAAAAGCTTCAACAGCAACTTCATGTGATTGACCAACGTTATGAAACGTCACGAAAATCAGCATTAGCTTGTTTGAAATCTGGAAACAAGAAAGCAGCGCTGAGGCATGCAAGGGAGTTAAAGTTGGCCAATGAGAGTAGAGAAAAATGTGCAGCTCTCTTGAATAGAGTGGAGGAAGTCCTTGATGTTATTGCAAGTGCCGAATCAACGAAGAAGGTTTCTGAAGCCATTCAAATTGGAGCTCAAGCTATCAAGGAAAATAAGATTAGTGTGGAAGAAGTCCAGCATAGCATACAAGAAATAGAGGAATGCATTGATACACAAAAGGAAATAGAAAATGTTCTAGAAGCAACTTCCCTTTACACAGTTAATGATGAAGAAAGCATTGAAGAGGAGTTGAAGAAATTAGAGCTGGATATAGGACGTGAAAACCTTCACGAACCAATCCTGAGCAGCAGGGTTAACAGCGCGGGGAAAACAGAGGCTTCAGACTCAGCTGATTCATTGATAGACTCTTTATATAATCTCAAGCTTGTAGATGATGGTCAAGCAAGGATACCAGCAGTTGAGGAGGGCACTGCTGAAACAAAGAGAAACAAGAAAACAGAGAGGTCTGAGCTTCAAACTGCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000278 GO:0000280 GO:0000815 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0005768 GO:0006810 GO:0006996 GO:0006997 GO:0006998 GO:0007034 GO:0007049 GO:0008104 GO:0008150 GO:0008565 GO:0009987 GO:0010008 GO:0010256 GO:0010458 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016192 GO:0022402 GO:0031090 GO:0031410 GO:0031468 GO:0031967 GO:0031975 GO:0031982 GO:0032991 GO:0033036 GO:0036452 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0045184 GO:0045324 GO:0046907 GO:0048285 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061024 GO:0071702 GO:0071705 GO:0071840 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0140014 GO:1903047

KEGG Pathways

Metabolic & Signaling

ko04144 ko04217 map04144 map04217

Pfam Domains

Protein Families

Snf7

Protein Analysis

450

Amino Acids

50.22

Weight (kDa)

5.34

Isoelectric Point (pI)

47.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WHD_CHMP7_1st	PF25880	18 - 97	1.1e-22	CHMP7 N-terminal winged helix domain
Snf7	PF03357	238 - 384	1.7e-16	Snf7

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007914)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62080 AT3G62080
fragaria_vesca	FvH4_1g26150 FvH4_1g26150
malus_domestica	MD09G1291400.v1.1
prunus_persica	Prupe.3G001500_v2.0.a1 Prupe.3G001500_v2.0.a1 Prupe.3G001500_v2.0.a1
pyrus_communis	pycom09g19930
rosa_chinensis	RchiOBHm_Chr3g0485641
rosa_laevigata	RLG00000023138
rosa_multiflora	Rmu_co8480455.1_g000001 Rmu_sc0001272.1_g000001 Rmu_sc0004711.1_g000003
rosa_roxburghii	Rroxscaffold_4G00290290 Rroxscaffold_4G00311870 Rroxscaffold_6G00396560 Rroxscaffold_6G00396870
rosa_rugosa	Rorug03G0220400
rosa_samantha	Rh3AG269300 Rh3BG305100 Rh3CG303400 Rh3DG299600
rosa_wichuraiana	Rw3G024000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	391
AccII	CGCG	1 cut(s)	1187
AccIII	TCCGGA	1 cut(s)	400
AciI	CCGC	3 cut(s)	102, 563, 1187
AclI	AACGTT	1 cut(s)	754
AclWI	GGATC	2 cut(s)	105, 309
AcoI	YGGCCR	1 cut(s)	843
AcuI	CTGAAG	4 cut(s)	539, 543, 960, 1188
AcyI	GRCGYC	1 cut(s)	325
AfeI	AGCGCT	1 cut(s)	816
AfiI	CCNNNNNNNGG	4 cut(s)	91, 320, 321, 631
AjiI	CACGTC	1 cut(s)	1142
AjnI	CCWGG	2 cut(s)	386, 528
Alw21I	GWGCWC	1 cut(s)	961
Alw26I	GTCTC	4 cut(s)	332, 431, 576, 615
AlwI	GGATC	2 cut(s)	105, 309
Aor13HI	TCCGGA	1 cut(s)	400
Aor51HI	AGCGCT	1 cut(s)	816
AoxI	GGCC	2 cut(s)	229, 843
ApeKI	GCWGC	4 cut(s)	458, 812, 869, 1170
Asp700I	GAANNNNTTC	5 cut(s)	524, 723, 945, 1056, 1149
AspLEI	GCGC	2 cut(s)	817, 1187
AspS9I	GGNCC	4 cut(s)	310, 384, 393, 545
AsuHPI	GGTGA	2 cut(s)	293, 505
AvaII	GGWCC	4 cut(s)	310, 384, 393, 545
BaeGI	GKGCMC	1 cut(s)	1295
BalI	TGGCCA	1 cut(s)	845
BanII	GRGCYC	2 cut(s)	85, 961
Bbv12I	GWGCWC	1 cut(s)	961
BbvCI	CCTCAGC	1 cut(s)	818
BbvI	GCAGC	4 cut(s)	445, 824, 881, 1182
BccI	CCATC	1 cut(s)	1253
BciT130I	CCWGG	2 cut(s)	388, 530
BciVI	GTATCC	1 cut(s)	1266
BcoDI	GTCTC	4 cut(s)	332, 431, 576, 615
BfaI	CTAG	2 cut(s)	683, 1061
BfmI	CTRYAG	1 cut(s)	318
BfoI	RGCGCY	1 cut(s)	818
BfuI	GTATCC	1 cut(s)	1266
BglI	GCCNNNNNGGC	1 cut(s)	174
BisI	GCNGC	4 cut(s)	459, 813, 870, 1171
BlsI	GCNGC	4 cut(s)	460, 814, 871, 1172
Bme1390I	CCNGG	2 cut(s)	388, 530
Bme18I	GGWCC	4 cut(s)	310, 384, 393, 545
BmgBI	CACGTC	1 cut(s)	1142
BmgT120I	GGNCC	4 cut(s)	310, 384, 393, 545
BmiI	GGNNCC	4 cut(s)	123, 312, 385, 547
BmrFI	CCNGG	2 cut(s)	388, 530
BmrI	ACTGGG	1 cut(s)	390
BmsI	GCATC	1 cut(s)	665
BmuI	ACTGGG	1 cut(s)	390
BplI	GAGNNNNNCTC	4 cut(s)	216, 248, 382, 414
BpmI	CTGGAG	1 cut(s)	160
Bpu10I	CCTNAGC	2 cut(s)	818, 1166
BpuEI	CTTGAG	3 cut(s)	447, 945, 1229
BsaHI	GRCGYC	1 cut(s)	325
BsaI	GGTCTC	1 cut(s)	615
BsaJI	CCNNGG	3 cut(s)	360, 591, 615
BsaWI	WCCGGW	1 cut(s)	400
BsaXI	ACNNNNNCTCC	2 cut(s)	824, 854
Bsc4I	CCNNNNNNNGG	4 cut(s)	91, 320, 321, 631
Bse1I	ACTGG	3 cut(s)	169, 218, 385
Bse3DI	GCAATG	1 cut(s)	372
BseAI	TCCGGA	1 cut(s)	400
BseBI	CCWGG	2 cut(s)	388, 530
BseDI	CCNNGG	3 cut(s)	360, 591, 615
BseGI	GGATG	1 cut(s)	429
BseLI	CCNNNNNNNGG	4 cut(s)	91, 320, 321, 631
BseMI	GCAATG	1 cut(s)	372
BseMII	CTCAG	7 cut(s)	307, 385, 666, 809, 1157, 1224, 1323
BseNI	ACTGG	3 cut(s)	169, 218, 385
BseRI	GAGGAG	3 cut(s)	240, 1124, 1301
BseSI	GKGCMC	1 cut(s)	1295
BseXI	GCAGC	4 cut(s)	445, 824, 881, 1182
BsgI	GTGCAG	2 cut(s)	683, 888
Bsh1236I	CGCG	1 cut(s)	1187
BshFI	GGCC	2 cut(s)	231, 845
BsiHKAI	GWGCWC	1 cut(s)	961
BsiSI	CCGG	1 cut(s)	401
BslFI	GGGAC	3 cut(s)	74, 397, 400
BslI	CCNNNNNNNGG	4 cut(s)	91, 320, 321, 631
BsmAI	GTCTC	4 cut(s)	332, 431, 576, 615
BsmBI	CGTCTC	2 cut(s)	332, 431
BsmFI	GGGAC	3 cut(s)	74, 397, 400
BsmI	GAATGC	2 cut(s)	491, 1031
BsnI	GGCC	2 cut(s)	231, 845
Bso31I	GGTCTC	1 cut(s)	615
Bsp1286I	GDGCHC	3 cut(s)	85, 961, 1295
Bsp13I	TCCGGA	1 cut(s)	400
Bsp143I	GATC	3 cut(s)	110, 301, 421
Bsp19I	CCATGG	1 cut(s)	360
BspACI	CCGC	3 cut(s)	102, 563, 1187
BspANI	GGCC	2 cut(s)	231, 845
BspCNI	CTCAG	7 cut(s)	306, 384, 665, 810, 1158, 1223, 1324
BspEI	TCCGGA	1 cut(s)	400
BspFNI	CGCG	1 cut(s)	1187
BspLI	GGNNCC	4 cut(s)	123, 312, 385, 547
BspMAI	CTGCAG	1 cut(s)	322
BspPI	GGATC	2 cut(s)	105, 309
BspTNI	GGTCTC	1 cut(s)	615
BsrDI	GCAATG	1 cut(s)	372
BsrI	ACTGG	3 cut(s)	169, 218, 385
BssECI	CCNNGG	3 cut(s)	360, 591, 615
BssMI	GATC	3 cut(s)	110, 301, 421
BssNI	GRCGYC	1 cut(s)	325
BssT1I	CCWWGG	3 cut(s)	360, 591, 615
Bst2UI	CCWGG	2 cut(s)	388, 530
Bst4CI	ACNGT	2 cut(s)	256, 1084
Bst6I	CTCTTC	1 cut(s)	1101
BstACI	GRCGYC	1 cut(s)	325
BstC8I	GCNNGC	5 cut(s)	104, 166, 588, 598, 825
BstDEI	CTNAG	7 cut(s)	293, 371, 652, 818, 1166, 1210, 1332
BstDSI	CCRYGG	1 cut(s)	360
BstENI	CCTNNNNNAGG	1 cut(s)	629
BstF5I	GGATG	1 cut(s)	429
BstFNI	CGCG	1 cut(s)	1187
BstH2I	RGCGCY	1 cut(s)	818
BstHHI	GCGC	2 cut(s)	817, 1187
BstKTI	GATC	3 cut(s)	113, 304, 424
BstMAI	GTCTC	4 cut(s)	332, 431, 576, 615
BstMBI	GATC	3 cut(s)	110, 301, 421
BstMWI	GCNNNNNNNGC	3 cut(s)	165, 174, 730
BstNI	CCWGG	2 cut(s)	388, 530
BstNSI	RCATGY	1 cut(s)	827
BstSCI	CCNGG	2 cut(s)	386, 528
BstSFI	CTRYAG	1 cut(s)	318
BstSLI	GKGCMC	1 cut(s)	1295
BstUI	CGCG	1 cut(s)	1187
BstV1I	GCAGC	4 cut(s)	445, 824, 881, 1182
BstX2I	RGATCY	2 cut(s)	110, 301
BstXI	CCANNNNNNTGG	1 cut(s)	361
BstYI	RGATCY	2 cut(s)	110, 301
BsuI	GTATCC	1 cut(s)	1266
BsuRI	GGCC	2 cut(s)	231, 845
BtgI	CCRYGG	1 cut(s)	360
BtrI	CACGTC	1 cut(s)	1142
BtsCI	GGATG	1 cut(s)	429
BtsI	GCAGTG	3 cut(s)	54, 315, 1293
BtsIMutI	CAGTG	5 cut(s)	54, 211, 301, 315, 1293
Cac8I	GCNNGC	5 cut(s)	104, 166, 588, 598, 825
CfoI	GCGC	2 cut(s)	817, 1187
Cfr13I	GGNCC	4 cut(s)	310, 384, 393, 545
CseI	GACGC	3 cut(s)	148, 314, 496
CviAII	CATG	4 cut(s)	361, 504, 740, 824
DdeI	CTNAG	7 cut(s)	293, 371, 652, 818, 1166, 1210, 1332
DpnI	GATC	3 cut(s)	112, 303, 423
DpnII	GATC	3 cut(s)	110, 301, 421
DrdI	GACNNNNNNGTC	1 cut(s)	391
DseDI	GACNNNNNNGTC	1 cut(s)	391
EaeI	YGGCCR	1 cut(s)	843
Eam1104I	CTCTTC	1 cut(s)	1101
EarI	CTCTTC	1 cut(s)	1101
Ecl136II	GAGCTC	1 cut(s)	959
Eco130I	CCWWGG	3 cut(s)	360, 591, 615
Eco147I	AGGCCT	1 cut(s)	231
Eco24I	GRGCYC	2 cut(s)	85, 961
Eco31I	GGTCTC	1 cut(s)	615
Eco47I	GGWCC	4 cut(s)	310, 384, 393, 545
Eco47III	AGCGCT	1 cut(s)	816
Eco53kI	GAGCTC	1 cut(s)	959
Eco57I	CTGAAG	4 cut(s)	539, 543, 960, 1188
EcoICRI	GAGCTC	1 cut(s)	959
EcoNI	CCTNNNNNAGG	1 cut(s)	629
EcoO109I	RGGNCCY	1 cut(s)	545
EcoRII	CCWGG	2 cut(s)	386, 528
EcoT14I	CCWWGG	3 cut(s)	360, 591, 615
EcoT22I	ATGCAT	1 cut(s)	1031
EcoT38I	GRGCYC	2 cut(s)	85, 961
ErhI	CCWWGG	3 cut(s)	360, 591, 615
Esp3I	CGTCTC	2 cut(s)	332, 431
FaeI	CATG	4 cut(s)	364, 507, 743, 827
FaqI	GGGAC	3 cut(s)	74, 397, 400
FatI	CATG	4 cut(s)	360, 503, 739, 823
FauI	CCCGC	2 cut(s)	95, 1180
Fnu4HI	GCNGC	4 cut(s)	459, 813, 870, 1171
FokI	GGATG	1 cut(s)	416
FriOI	GRGCYC	2 cut(s)	85, 961
Fsp4HI	GCNGC	4 cut(s)	459, 813, 870, 1171
FspBI	CTAG	2 cut(s)	683, 1061
GlaI	GCGC	2 cut(s)	816, 1186
GluI	GCNGC	4 cut(s)	459, 813, 870, 1171
GsuI	CTGGAG	1 cut(s)	160
HaeII	RGCGCY	1 cut(s)	818
HaeIII	GGCC	2 cut(s)	231, 845
HapII	CCGG	1 cut(s)	401
HgaI	GACGC	3 cut(s)	148, 314, 496
HhaI	GCGC	2 cut(s)	817, 1187
Hin1I	GRCGYC	1 cut(s)	325
Hin1II	CATG	4 cut(s)	364, 507, 743, 827
Hin6I	GCGC	2 cut(s)	815, 1185
HinP1I	GCGC	2 cut(s)	815, 1185
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HindIII	AAGCTT	4 cut(s)	473, 555, 722, 1247
HinfI	GANTC	5 cut(s)	87, 920, 1208, 1217, 1229
HpaI	GTTAAC	1 cut(s)	1180
HpaII	CCGG	1 cut(s)	401
HphI	GGTGA	2 cut(s)	293, 505
Hpy166II	GTNNAC	4 cut(s)	130, 310, 396, 1180
Hpy188I	TCNGA	5 cut(s)	115, 484, 940, 1207, 1333
Hpy188III	TCNNGA	9 cut(s)	139, 401, 683, 768, 798, 877, 1061, 1154, 1165
Hpy8I	GTNNAC	4 cut(s)	130, 310, 396, 1180
Hpy99I	CGWCG	1 cut(s)	164
HpyAV	CCTTC	4 cut(s)	272, 442, 925, 1160
HpyCH4III	ACNGT	2 cut(s)	256, 1084
HpyCH4IV	ACGT	3 cut(s)	754, 764, 1141
HpyCH4V	TGCA	6 cut(s)	320, 700, 827, 869, 911, 1029
HpyF10VI	GCNNNNNNNGC	3 cut(s)	165, 174, 730
HpyF3I	CTNAG	7 cut(s)	293, 371, 652, 818, 1166, 1210, 1332
HpySE526I	ACGT	3 cut(s)	754, 764, 1141
Hsp92I	GRCGYC	1 cut(s)	325
Hsp92II	CATG	4 cut(s)	364, 507, 743, 827
HspAI	GCGC	2 cut(s)	815, 1185
Kpn2I	TCCGGA	1 cut(s)	400
KspAI	GTTAAC	1 cut(s)	1180
Kzo9I	GATC	3 cut(s)	110, 301, 421
LmnI	GCTCC	2 cut(s)	403, 956
Lsp1109I	GCAGC	4 cut(s)	445, 824, 881, 1182
LweI	GCATC	1 cut(s)	665
MaeI	CTAG	2 cut(s)	683, 1061
MaeII	ACGT	3 cut(s)	754, 764, 1141
MaeIII	GTNAC	1 cut(s)	765
MalI	GATC	3 cut(s)	112, 303, 423
MboI	GATC	3 cut(s)	110, 301, 421
MflI	RGATCY	2 cut(s)	110, 301
MhlI	GDGCHC	3 cut(s)	85, 961, 1295
MlsI	TGGCCA	1 cut(s)	845
MluCI	AATT	3 cut(s)	355, 951, 1121
MluNI	TGGCCA	1 cut(s)	845
MlyI	GAGTC	2 cut(s)	1202, 1223
Mox20I	TGGCCA	1 cut(s)	845
Mph1103I	ATGCAT	1 cut(s)	1031
MroI	TCCGGA	1 cut(s)	400
MroXI	GAANNNNTTC	5 cut(s)	524, 723, 945, 1056, 1149
MscI	TGGCCA	1 cut(s)	845
MseI	TTAA	4 cut(s)	149, 836, 1086, 1179
MslI	CAYNNNNRTG	1 cut(s)	365
Msp20I	TGGCCA	1 cut(s)	845
MspA1I	CMGCKG	2 cut(s)	563, 1214
MspI	CCGG	1 cut(s)	401
MspR9I	CCNGG	2 cut(s)	388, 530
Mva1269I	GAATGC	2 cut(s)	491, 1031
MvaI	CCWGG	2 cut(s)	388, 530
MvnI	CGCG	1 cut(s)	1187
MwoI	GCNNNNNNNGC	3 cut(s)	165, 174, 730
NcoI	CCATGG	1 cut(s)	360
NdeII	GATC	3 cut(s)	110, 301, 421
NlaIII	CATG	4 cut(s)	364, 507, 743, 827
NlaIV	GGNNCC	4 cut(s)	123, 312, 385, 547
NmuCI	GTSAC	1 cut(s)	765
NsiI	ATGCAT	1 cut(s)	1031
NspI	RCATGY	1 cut(s)	827
PaeI	GCATGC	1 cut(s)	827
PceI	AGGCCT	1 cut(s)	231
PctI	GAATGC	2 cut(s)	491, 1031
PdmI	GAANNNNTTC	5 cut(s)	524, 723, 945, 1056, 1149
PfeI	GAWTC	3 cut(s)	87, 920, 1217
PfoI	TCCNGGA	1 cut(s)	528
PkrI	GCNGC	4 cut(s)	460, 814, 871, 1172
PleI	GAGTC	2 cut(s)	1202, 1223
PpsI	GAGTC	2 cut(s)	1202, 1223
PpuMI	RGGWCCY	1 cut(s)	545
Psp124BI	GAGCTC	1 cut(s)	961
Psp1406I	AACGTT	1 cut(s)	754
Psp5II	RGGWCCY	1 cut(s)	545
Psp6I	CCWGG	2 cut(s)	386, 528
PspGI	CCWGG	2 cut(s)	386, 528
PspN4I	GGNNCC	4 cut(s)	123, 312, 385, 547
PspPI	GGNCC	4 cut(s)	310, 384, 393, 545
PspPPI	RGGWCCY	1 cut(s)	545
PstI	CTGCAG	1 cut(s)	322
PsuI	RGATCY	2 cut(s)	110, 301
PvuII	CAGCTG	1 cut(s)	1214
RseI	CAYNNNNRTG	1 cut(s)	365
SacI	GAGCTC	1 cut(s)	961
SaqAI	TTAA	4 cut(s)	149, 836, 1086, 1179
SatI	GCNGC	4 cut(s)	459, 813, 870, 1171
Sau3AI	GATC	3 cut(s)	110, 301, 421
Sau96I	GGNCC	4 cut(s)	310, 384, 393, 545
SchI	GAGTC	2 cut(s)	1202, 1223
ScrFI	CCNGG	2 cut(s)	388, 530
SduI	GDGCHC	3 cut(s)	85, 961, 1295
SfaNI	GCATC	1 cut(s)	665
SfcI	CTRYAG	1 cut(s)	318
SinI	GGWCC	4 cut(s)	310, 384, 393, 545
SmiMI	CAYNNNNRTG	1 cut(s)	365
SmlI	CTYRAG	3 cut(s)	462, 960, 1244
SmoI	CTYRAG	3 cut(s)	462, 960, 1244
SphI	GCATGC	1 cut(s)	827
Sse9I	AATT	3 cut(s)	355, 951, 1121
SseBI	AGGCCT	1 cut(s)	231
SsiI	CCGC	3 cut(s)	102, 563, 1187
SspMI	CTAG	2 cut(s)	683, 1061
SstI	GAGCTC	1 cut(s)	961
StuI	AGGCCT	1 cut(s)	231
StyD4I	CCNGG	2 cut(s)	386, 528
StyI	CCWWGG	3 cut(s)	360, 591, 615
TaaI	ACNGT	2 cut(s)	256, 1084
TaiI	ACGT	3 cut(s)	757, 767, 1144
TaqI	TCGA	1 cut(s)	223
TasI	AATT	3 cut(s)	355, 951, 1121
TfiI	GAWTC	3 cut(s)	87, 920, 1217
Tru1I	TTAA	4 cut(s)	149, 836, 1086, 1179
Tru9I	TTAA	4 cut(s)	149, 836, 1086, 1179
TscAI	CASTG	5 cut(s)	54, 218, 301, 322, 1300
TseFI	GTSAC	1 cut(s)	765
TseI	GCWGC	4 cut(s)	458, 812, 869, 1170
Tsp45I	GTSAC	1 cut(s)	765
TspDTI	ATGAA	9 cut(s)	175, 279, 291, 492, 567, 728, 774, 1107, 1209
TspRI	CASTG	5 cut(s)	54, 218, 301, 322, 1300
VpaK11BI	GGWCC	4 cut(s)	310, 384, 393, 545
XagI	CCTNNNNNAGG	1 cut(s)	629
XbaI	TCTAGA	2 cut(s)	682, 1060
XceI	RCATGY	1 cut(s)	827
XcmI	CCANNNNNNNNNTGG	1 cut(s)	536
XmnI	GAANNNNTTC	5 cut(s)	524, 723, 945, 1056, 1149
XspI	CTAG	2 cut(s)	683, 1061
Zsp2I	ATGCAT	1 cut(s)	1031

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.