MD10G1080500.v1.1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0005291
Physical Location & Seq
Forward (+)
11879465 .. 11882334
2870 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1080500.v1.1.491

Sequence Viewer

Length: 2037 bp
ATGCAGTTTCTAAAAGACGGTCTTACATATCACGTCCAAGCCATAAAAGCCAGTTTTGAGCTAACCATTTTCACCTCCAATCAACTCATTCACTTGTACTCCAAGCATGGCCTTATTCGAGAAGCCCAGAAACTGTTCGACGAAATGCCCCAACGAAACGTCTTCTCTTGGAATGCCATAATCTCCGCCCACATCAAGGCACGCAACTTGAACCGGGCACGCCAGTTATTTGACGCTGCCTCTTACAGGGATTTGGTCACGTATAATTCCATGTTGTCTGGTTATGTAAGCGCCGACGGGTATGAGGATTGTGCGCTTGAGCTGTTTCGCGAAATGAAGTCACGGGATGATCGGATTCGGATTGACGAGATTGGTCTCACGACTATGCTGAACTTGACTGCCAAATTGGAAATTGGGTATTATGGGAGACAGTTGCATTGTTTTATGGTGAAAACTGCTAATGATTTAAGTGGGTTCGCAGTGAGCTCGCTTATCGATATGTATAGTAAATGTGGGTGTTTTCAAGAAGCGTTGCGGATGTTTAGTGGGTATAGAGGGGTGGTTGATTTGGTTTCGAAAAATGCAATGGTGGCGGCTTGTTGTAGAGAAGGCAAATTAGAAATGGCAGATGATCTGTTTTGGACAGAGCCAGAGCTGAATGATGCTGTGTCTTGGAATACACTGATTGCAGGGTATGTGCAGCATGGTTTTGAGCAAGAGGCACTGAAATTGTTTGTCTGTATGGCAGATAATGGATTCAGATGGAATGACCACACTTTTGCTAGTGCTTTGAGTGCTTGCTCCGGTTTGAAGAGCTCCAAACTTGGAAAGGAAATCCATGCTTGGGTCTTGAAGAATGGGATGACATCAAATCCGTATATAGTCAGTGGCATTGTTGATGTCTACTCCAAGTGTGGTAATATGTGTTATGCAAAGTCAGTTCACGTAGCAACGGGGTCAGAAAATTCCTTTTCGGTAAGTTCAATGATTACTGGTCATGCTTCTCATGGTAACCTAATGGAAGCACGAAAACTTTTTGACTCATTGACTGAAAAAAACGCTGTTGTTTGGACAGCTTTGTTTTCTGGGTATCTCAAATACCAGAAATGCGAAGCTATATTTGAACTTTTAGGTGAGTTCACGGCAAAGGAATCAATAGTTCCTGATGCTGGGATTCTCATCAGTGTGCTTGGTGCCTGTTCAATACAAGCAGCCCTGGATCCTGGGAAGCAGATCCATGCTTACATTCTAAGGAACGGGATTGAAATCGATAAGAAGCTTTTTAGTGCTTTGGTTGATATGTACTCGAAATCCGGGAGTATAAACTACGCAGAAAAACTTTTTAAAAGCGACTATGACAGAGATATAATCCTGTACAATGTGATGTTAGCTGGTTATGCTCACCATGGGCATGAAAATAAAGCTATCCAGATTTTCAATGAAATGTTGGAGAAAGGTATGGGACCCGATGCAATCACCTTTTTAGCACTGCTGTCAGCTTGTCGACACTCTTGCTTGGTGGAATTGGGTGAGCAGTTCTTCTACTTGATGGAAAAAGTGTATAATGTTTTACCCGAAATTGAGCACTACGCTTGCATGATTGATTTGTACGGGAGGGCTAATCAACTTGATAAGGCAATAGCATTCATGAGAAAGATCCCTATAGAATCAGACACCATTTTATGGGGGGCATTCATGAATGCTTGTAGGGTAAACGGGAACGCCGTACTTGCTAGAGAGGCAGAGGAGAAACTATTAAAACTTGAAGGAGACATTGGTGATCGGTATGTACAGTTGGTTAATTTCTATGCAGCGGAAGGAGATTGGGATGAGGTTTGCAGAATAAGGAAGAAGATGAAAGGGAAGGAGGCCAAGAAGACCGCTGGTTGCAGTTGGTTATACGTGGAAAATGGTGTTCATATATTTATCTCTGGTGATAAAGCCCACCCAAGAGCAGAGGCTATAAATTGTACATTAGCCTTATTGACTGAAGAACTGTATCAGATATCTCGGGCCTCCGCTGGGATCATAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2 PfkB TB2_DP1_HVA22

Protein Analysis

679

Amino Acids

75.99

Weight (kDa)

6.13

Isoelectric Point (pI)

27.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR PF01535 25 - 54 4.2e-06 PPR repeat
PPR_2 PF13041 221 - 267 6.2e-08 PPR repeat family
PPR PF01535 223 - 253 4.9e-07 PPR repeat
PPR_3 PF13812 454 - 501 1.1e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 455 - 501 9.3e-12 PPR repeat family
PPR PF01535 458 - 486 1.4e-06 PPR repeat
E_motif PF20431 577 - 633 1.6e-12 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1193
AccB7I CCANNNNNTGG 1 cut(s) 1683
AccI GTMKAC 2 cut(s) 903, 1504
AccII CGCG 1 cut(s) 330
AciI CCGC 6 cut(s) 186, 535, 593, 1814, 1881, 2019
AclWI GGATC 5 cut(s) 1214, 1227, 1228, 1651, 2033
AcsI RAATTY 1 cut(s) 964
AcuI CTGAAG 1 cut(s) 2010
AfaI GTAC 7 cut(s) 98, 1304, 1376, 1610, 1728, 1791, 1972
AfiI CCNNNNNNNGG 6 cut(s) 196, 246, 844, 1169, 1683, 2022
AjiI CACGTC 1 cut(s) 34
AjnI CCWGG 2 cut(s) 1215, 1222
AjuI GAANNNNNNNTTGG 2 cut(s) 1758, 1790
Alw21I GWGCWC 3 cut(s) 488, 818, 1587
Alw26I GTCTC 3 cut(s) 380, 421, 1764
AlwI GGATC 5 cut(s) 1214, 1227, 1228, 1651, 2033
AlwNI CAGNNNCTG 1 cut(s) 133
Ama87I CYCGRG 1 cut(s) 2010
AoxI GGCC 3 cut(s) 109, 1869, 2013
ApeKI GCWGC 4 cut(s) 236, 700, 1211, 1811
ApoI RAATTY 1 cut(s) 964
ArsI GACNNNNNNTTYG 2 cut(s) 761, 793
Asp700I GAANNNNTTC 1 cut(s) 134
AspLEI GCGC 2 cut(s) 293, 316
AspS9I GGNCC 2 cut(s) 1463, 2013
AsuC2I CCSGG 2 cut(s) 215, 1315
AsuHPI GGTGA 8 cut(s) 64, 460, 1145, 1394, 1468, 1541, 1790, 1946
AsuII TTCGAA 1 cut(s) 575
AvaI CYCGRG 1 cut(s) 2010
AvaII GGWCC 1 cut(s) 1463
BaeGI GKGCMC 1 cut(s) 220
BamHI GGATCC 1 cut(s) 1219
BanI GGYRCC 1 cut(s) 1193
BanII GRGCYC 2 cut(s) 488, 818
BbsI GAAGAC 2 cut(s) 154, 1883
Bbv12I GWGCWC 3 cut(s) 488, 818, 1587
BbvI GCAGC 4 cut(s) 223, 712, 1223, 1823
BccI CCATC 2 cut(s) 756, 1543
BceAI ACGGC 2 cut(s) 1158, 1709
BcgI CGANNNNNNTGC 4 cut(s) 468, 502, 1494, 1528
BciT130I CCWGG 2 cut(s) 1217, 1224
BcnI CCSGG 2 cut(s) 215, 1315
BcoDI GTCTC 3 cut(s) 380, 421, 1764
BfaI CTAG 2 cut(s) 783, 1734
BfmI CTRYAG 1 cut(s) 1662
BfoI RGCGCY 1 cut(s) 294
BisI GCNGC 5 cut(s) 237, 594, 701, 1212, 1812
BlsI GCNGC 5 cut(s) 238, 595, 702, 1213, 1813
Bme1390I CCNGG 4 cut(s) 215, 1217, 1224, 1315
Bme18I GGWCC 1 cut(s) 1463
BmeT110I CYCGRG 1 cut(s) 2010
BmgBI CACGTC 1 cut(s) 34
BmgT120I GGNCC 2 cut(s) 1463, 2013
BmiI GGNNCC 4 cut(s) 1195, 1221, 1464, 1465
BmrFI CCNGG 4 cut(s) 215, 1217, 1224, 1315
BmsI GCATC 3 cut(s) 652, 1156, 1459
BpiI GAAGAC 2 cut(s) 154, 1883
Bpu14I TTCGAA 1 cut(s) 575
BpuEI CTTGAG 1 cut(s) 338
BpuMI CCSGG 2 cut(s) 215, 1315
Bsa29I ATCGAT 2 cut(s) 495, 1269
BsaAI YACGTR 3 cut(s) 261, 946, 1903
BsaBI GATNNNNATC 2 cut(s) 1178, 1265
BsaI GGTCTC 1 cut(s) 380
BsaJI CCNNGG 3 cut(s) 1215, 1223, 1405
BsaWI WCCGGW 1 cut(s) 803
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 6 cut(s) 196, 246, 844, 1169, 1683, 2022
Bse1I ACTGG 3 cut(s) 51, 223, 997
Bse3DI GCAATG 1 cut(s) 591
Bse8I GATNNNNATC 2 cut(s) 1178, 1265
BseBI CCWGG 2 cut(s) 1217, 1224
BseCI ATCGAT 2 cut(s) 495, 1269
BseDI CCNNGG 3 cut(s) 1215, 1223, 1405
BseGI GGATG 4 cut(s) 352, 543, 867, 1834
BseJI GATNNNNATC 2 cut(s) 1178, 1265
BseLI CCNNNNNNNGG 6 cut(s) 196, 246, 844, 1169, 1683, 2022
BseMI GCAATG 1 cut(s) 591
BseNI ACTGG 3 cut(s) 51, 223, 997
BseRI GAGGAG 1 cut(s) 1760
BseSI GKGCMC 1 cut(s) 220
BseXI GCAGC 4 cut(s) 223, 712, 1223, 1823
BseYI CCCAGC 2 cut(s) 1169, 2021
BsgI GTGCAG 1 cut(s) 719
Bsh1236I CGCG 1 cut(s) 330
BshFI GGCC 3 cut(s) 111, 1871, 2015
BshNI GGYRCC 1 cut(s) 1193
BshVI ATCGAT 2 cut(s) 495, 1269
BsiHKAI GWGCWC 3 cut(s) 488, 818, 1587
BsiHKCI CYCGRG 1 cut(s) 2010
BsiSI CCGG 3 cut(s) 214, 804, 1314
BslFI GGGAC 1 cut(s) 1476
BslI CCNNNNNNNGG 6 cut(s) 196, 246, 844, 1169, 1683, 2022
BsmAI GTCTC 3 cut(s) 380, 421, 1764
BsmFI GGGAC 1 cut(s) 1476
BsmI GAATGC 4 cut(s) 178, 1643, 1691, 1705
BsnI GGCC 3 cut(s) 111, 1871, 2015
Bso31I GGTCTC 1 cut(s) 380
BsoBI CYCGRG 1 cut(s) 2010
Bsp119I TTCGAA 1 cut(s) 575
Bsp1286I GDGCHC 4 cut(s) 220, 488, 818, 1587
Bsp1407I TGTACA 3 cut(s) 1374, 1789, 1970
Bsp143I GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
Bsp19I CCATGG 1 cut(s) 1405
Bsp68I TCGCGA 1 cut(s) 330
BspACI CCGC 6 cut(s) 186, 535, 593, 1814, 1881, 2019
BspANI GGCC 3 cut(s) 111, 1871, 2015
BspDI ATCGAT 2 cut(s) 495, 1269
BspFNI CGCG 1 cut(s) 330
BspHI TCATGA 2 cut(s) 1647, 1695
BspLI GGNNCC 4 cut(s) 1195, 1221, 1464, 1465
BspPI GGATC 5 cut(s) 1214, 1227, 1228, 1651, 2033
BspQI GCTCTTC 1 cut(s) 806
BspT104I TTCGAA 1 cut(s) 575
BspT107I GGYRCC 1 cut(s) 1193
BspTNI GGTCTC 1 cut(s) 380
BsrDI GCAATG 1 cut(s) 591
BsrGI TGTACA 3 cut(s) 1374, 1789, 1970
BsrI ACTGG 3 cut(s) 51, 223, 997
BssECI CCNNGG 3 cut(s) 1215, 1223, 1405
BssMI GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
BssT1I CCWWGG 1 cut(s) 1405
Bst2UI CCWGG 2 cut(s) 1217, 1224
Bst4CI ACNGT 5 cut(s) 20, 135, 432, 1794, 1998
Bst6I CTCTTC 1 cut(s) 806
BstAUI TGTACA 3 cut(s) 1374, 1789, 1970
BstBAI YACGTR 3 cut(s) 261, 946, 1903
BstBI TTCGAA 1 cut(s) 575
BstC8I GCNNGC 5 cut(s) 202, 220, 488, 799, 1594
BstDEI CTNAG 1 cut(s) 1250
BstDSI CCRYGG 1 cut(s) 1405
BstEII GGTNACC 1 cut(s) 1010
BstENI CCTNNNNNAGG 1 cut(s) 244
BstF5I GGATG 4 cut(s) 352, 543, 867, 1834
BstFNI CGCG 1 cut(s) 330
BstH2I RGCGCY 1 cut(s) 294
BstHHI GCGC 2 cut(s) 293, 316
BstKTI GATC 7 cut(s) 352, 634, 1222, 1236, 1659, 1783, 2028
BstMAI GTCTC 3 cut(s) 380, 421, 1764
BstMBI GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
BstMWI GCNNNNNNNGC 6 cut(s) 47, 590, 794, 1397, 1730, 1739
BstNI CCWGG 2 cut(s) 1217, 1224
BstPI GGTNACC 1 cut(s) 1010
BstSCI CCNGG 4 cut(s) 213, 1215, 1222, 1313
BstSFI CTRYAG 1 cut(s) 1662
BstSLI GKGCMC 1 cut(s) 220
BstUI CGCG 1 cut(s) 330
BstV1I GCAGC 4 cut(s) 223, 712, 1223, 1823
BstV2I GAAGAC 2 cut(s) 154, 1883
BstX2I RGATCY 3 cut(s) 1219, 1233, 1656
BstYI RGATCY 3 cut(s) 1219, 1233, 1656
Bsu15I ATCGAT 2 cut(s) 495, 1269
BsuRI GGCC 3 cut(s) 111, 1871, 2015
BsuTUI ATCGAT 2 cut(s) 495, 1269
BtgI CCRYGG 1 cut(s) 1405
BtrI CACGTC 1 cut(s) 34
BtsCI GGATG 4 cut(s) 352, 543, 867, 1834
BtsI GCAGTG 2 cut(s) 486, 1487
BtsIMutI CAGTG 6 cut(s) 486, 680, 722, 892, 1189, 1487
BtuMI TCGCGA 1 cut(s) 330
Cac8I GCNNGC 5 cut(s) 202, 220, 488, 799, 1594
CaiI CAGNNNCTG 1 cut(s) 133
CciI TCATGA 2 cut(s) 1647, 1695
CfoI GCGC 2 cut(s) 293, 316
Cfr13I GGNCC 2 cut(s) 1463, 2013
ClaI ATCGAT 2 cut(s) 495, 1269
CseI GACGC 1 cut(s) 242
Csp6I GTAC 7 cut(s) 97, 1303, 1375, 1609, 1727, 1790, 1971
CviQI GTAC 7 cut(s) 97, 1303, 1375, 1609, 1727, 1790, 1971
DdeI CTNAG 1 cut(s) 1250
DpnI GATC 7 cut(s) 351, 633, 1221, 1235, 1658, 1782, 2027
DpnII GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
DraI TTTAAA 1 cut(s) 1345
Eam1104I CTCTTC 1 cut(s) 806
EarI CTCTTC 1 cut(s) 806
EciI GGCGGA 1 cut(s) 175
Ecl136II GAGCTC 2 cut(s) 486, 816
Eco130I CCWWGG 1 cut(s) 1405
Eco24I GRGCYC 2 cut(s) 488, 818
Eco31I GGTCTC 1 cut(s) 380
Eco32I GATATC 1 cut(s) 2007
Eco47I GGWCC 1 cut(s) 1463
Eco53kI GAGCTC 2 cut(s) 486, 816
Eco57I CTGAAG 1 cut(s) 2010
Eco88I CYCGRG 1 cut(s) 2010
Eco91I GGTNACC 1 cut(s) 1010
EcoICRI GAGCTC 2 cut(s) 486, 816
EcoNI CCTNNNNNAGG 1 cut(s) 244
EcoO109I RGGNCCY 1 cut(s) 1463
EcoO65I GGTNACC 1 cut(s) 1010
EcoRII CCWGG 2 cut(s) 1215, 1222
EcoRV GATATC 1 cut(s) 2007
EcoT14I CCWWGG 1 cut(s) 1405
EcoT38I GRGCYC 2 cut(s) 488, 818
ErhI CCWWGG 1 cut(s) 1405
FalI AAGNNNNNCTT 1 cut(s) 38
FaqI GGGAC 1 cut(s) 1476
FblI GTMKAC 2 cut(s) 903, 1504
Fnu4HI GCNGC 5 cut(s) 237, 594, 701, 1212, 1812
FokI GGATG 4 cut(s) 359, 550, 874, 1841
FriOI GRGCYC 2 cut(s) 488, 818
Fsp4HI GCNGC 5 cut(s) 237, 594, 701, 1212, 1812
FspBI CTAG 2 cut(s) 783, 1734
GlaI GCGC 2 cut(s) 292, 315
GluI GCNGC 5 cut(s) 237, 594, 701, 1212, 1812
GsaI CCCAGC 2 cut(s) 1173, 2025
HaeII RGCGCY 1 cut(s) 294
HaeIII GGCC 3 cut(s) 111, 1871, 2015
HapII CCGG 3 cut(s) 214, 804, 1314
HgaI GACGC 1 cut(s) 242
HhaI GCGC 2 cut(s) 293, 316
Hin6I GCGC 2 cut(s) 291, 314
HinP1I GCGC 2 cut(s) 291, 314
HincII GTYRAC 1 cut(s) 1505
HindII GTYRAC 1 cut(s) 1505
HindIII AAGCTT 1 cut(s) 1277
HinfI GANTC 6 cut(s) 355, 756, 1040, 1151, 1174, 1667
HpaII CCGG 3 cut(s) 214, 804, 1314
HphI GGTGA 8 cut(s) 64, 460, 1145, 1394, 1468, 1541, 1790, 1946
Hpy166II GTNNAC 5 cut(s) 904, 943, 1140, 1505, 1714
Hpy188I TCNGA 6 cut(s) 354, 360, 761, 961, 1672, 2004
Hpy188III TCNNGA 9 cut(s) 119, 329, 379, 524, 850, 1163, 1429, 1648, 1696
Hpy8I GTNNAC 5 cut(s) 904, 943, 1140, 1505, 1714
Hpy99I CGWCG 2 cut(s) 143, 299
HpyAV CCTTC 4 cut(s) 602, 1760, 1811, 1858
HpyCH4III ACNGT 5 cut(s) 20, 135, 432, 1794, 1998
HpyCH4IV ACGT 5 cut(s) 33, 159, 260, 945, 1902
HpyF10VI GCNNNNNNNGC 6 cut(s) 47, 590, 794, 1397, 1730, 1739
HpyF3I CTNAG 1 cut(s) 1250
HpySE526I ACGT 5 cut(s) 33, 159, 260, 945, 1902
HspAI GCGC 2 cut(s) 291, 314
KflI GGGWCCC 1 cut(s) 1463
Kzo9I GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
LguI GCTCTTC 1 cut(s) 806
LmnI GCTCC 2 cut(s) 806, 821
Lsp1109I GCAGC 4 cut(s) 223, 712, 1223, 1823
LweI GCATC 3 cut(s) 652, 1156, 1459
MaeI CTAG 2 cut(s) 783, 1734
MaeII ACGT 5 cut(s) 33, 159, 260, 945, 1902
MaeIII GTNAC 3 cut(s) 256, 339, 1010
MalI GATC 7 cut(s) 351, 633, 1221, 1235, 1658, 1782, 2027
MboI GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
MboII GAAGA 8 cut(s) 154, 823, 865, 1531, 1861, 1864, 1888, 2003
MflI RGATCY 3 cut(s) 1219, 1233, 1656
MhlI GDGCHC 4 cut(s) 220, 488, 818, 1587
MlyI GAGTC 1 cut(s) 1034
MmeI TCCRAC 1 cut(s) 1428
MroXI GAANNNNTTC 1 cut(s) 134
MseI TTAA 4 cut(s) 467, 1344, 1757, 1800
MslI CAYNNNNRTG 3 cut(s) 383, 1184, 1410
MspA1I CMGCKG 3 cut(s) 1814, 1883, 2021
MspI CCGG 3 cut(s) 214, 804, 1314
MspR9I CCNGG 4 cut(s) 215, 1217, 1224, 1315
Mva1269I GAATGC 4 cut(s) 178, 1643, 1691, 1705
MvaI CCWGG 2 cut(s) 1217, 1224
MvnI CGCG 1 cut(s) 330
MwoI GCNNNNNNNGC 6 cut(s) 47, 590, 794, 1397, 1730, 1739
NciI CCSGG 2 cut(s) 215, 1315
NcoI CCATGG 1 cut(s) 1405
NdeII GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
NlaIV GGNNCC 4 cut(s) 1195, 1221, 1464, 1465
NmuCI GTSAC 2 cut(s) 256, 339
NruI TCGCGA 1 cut(s) 330
NspV TTCGAA 1 cut(s) 575
PagI TCATGA 2 cut(s) 1647, 1695
PciSI GCTCTTC 1 cut(s) 806
PcsI WCGNNNNNNNCGW 1 cut(s) 1722
PctI GAATGC 4 cut(s) 178, 1643, 1691, 1705
PdmI GAANNNNTTC 1 cut(s) 134
PfeI GAWTC 5 cut(s) 355, 756, 1151, 1174, 1667
PflMI CCANNNNNTGG 1 cut(s) 1683
PfoI TCCNGGA 1 cut(s) 1313
PkrI GCNGC 5 cut(s) 238, 595, 702, 1213, 1813
PleI GAGTC 1 cut(s) 1034
PpsI GAGTC 1 cut(s) 1034
Ppu21I YACGTR 3 cut(s) 261, 946, 1903
PpuMI RGGWCCY 1 cut(s) 1463
Psp124BI GAGCTC 2 cut(s) 488, 818
Psp5II RGGWCCY 1 cut(s) 1463
Psp6I CCWGG 2 cut(s) 1215, 1222
PspEI GGTNACC 1 cut(s) 1010
PspFI CCCAGC 2 cut(s) 1169, 2021
PspGI CCWGG 2 cut(s) 1215, 1222
PspN4I GGNNCC 4 cut(s) 1195, 1221, 1464, 1465
PspPI GGNCC 2 cut(s) 1463, 2013
PspPPI RGGWCCY 1 cut(s) 1463
PstNI CAGNNNCTG 1 cut(s) 133
PsuI RGATCY 3 cut(s) 1219, 1233, 1656
RruI TCGCGA 1 cut(s) 330
RsaI GTAC 7 cut(s) 98, 1304, 1376, 1610, 1728, 1791, 1972
RsaNI GTAC 7 cut(s) 97, 1303, 1375, 1609, 1727, 1790, 1971
RseI CAYNNNNRTG 3 cut(s) 383, 1184, 1410
SacI GAGCTC 2 cut(s) 488, 818
SalI GTCGAC 1 cut(s) 1503
SapI GCTCTTC 1 cut(s) 806
SaqAI TTAA 4 cut(s) 467, 1344, 1757, 1800
SatI GCNGC 5 cut(s) 237, 594, 701, 1212, 1812
Sau3AI GATC 7 cut(s) 349, 631, 1219, 1233, 1656, 1780, 2025
Sau96I GGNCC 2 cut(s) 1463, 2013
SchI GAGTC 1 cut(s) 1034
ScrFI CCNGG 4 cut(s) 215, 1217, 1224, 1315
SduI GDGCHC 4 cut(s) 220, 488, 818, 1587
SfaNI GCATC 3 cut(s) 652, 1156, 1459
SfcI CTRYAG 1 cut(s) 1662
SfuI TTCGAA 1 cut(s) 575
SinI GGWCC 1 cut(s) 1463
SmiMI CAYNNNNRTG 3 cut(s) 383, 1184, 1410
SmlI CTYRAG 1 cut(s) 317
SmoI CTYRAG 1 cut(s) 317
SsiI CCGC 6 cut(s) 186, 535, 593, 1814, 1881, 2019
SspMI CTAG 2 cut(s) 783, 1734
SstI GAGCTC 2 cut(s) 488, 818
StyD4I CCNGG 4 cut(s) 213, 1215, 1222, 1313
StyI CCWWGG 1 cut(s) 1405
TaaI ACNGT 5 cut(s) 20, 135, 432, 1794, 1998
TaiI ACGT 5 cut(s) 36, 162, 263, 948, 1905
TaqI TCGA 7 cut(s) 118, 138, 495, 575, 1269, 1307, 1504
TatI WGTACW 5 cut(s) 96, 1302, 1374, 1789, 1970
TauI GCSGC 1 cut(s) 596
TfiI GAWTC 5 cut(s) 355, 756, 1151, 1174, 1667
Tru1I TTAA 4 cut(s) 467, 1344, 1757, 1800
Tru9I TTAA 4 cut(s) 467, 1344, 1757, 1800
TscAI CASTG 6 cut(s) 486, 687, 729, 892, 1189, 1494
TseFI GTSAC 2 cut(s) 256, 339
TseI GCWGC 4 cut(s) 236, 700, 1211, 1811
Tsp45I GTSAC 2 cut(s) 256, 339
TspDTI ATGAA 8 cut(s) 350, 1428, 1455, 1636, 1684, 1712, 1871, 1907
TspGWI ACGGA 1 cut(s) 864
TspRI CASTG 6 cut(s) 486, 687, 729, 892, 1189, 1494
Van91I CCANNNNNTGG 1 cut(s) 1683
VpaK11BI GGWCC 1 cut(s) 1463
XagI CCTNNNNNAGG 1 cut(s) 244
XapI RAATTY 1 cut(s) 964
XmiI GTMKAC 2 cut(s) 903, 1504
XmnI GAANNNNTTC 1 cut(s) 134
XspI CTAG 2 cut(s) 783, 1734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.