Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000176

Orthogroup ID

OG0005291

Physical Location & Seq

Genomic Coordinates Reverse (-)

242561 .. 244596

Gene Structure 2036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_176G00431070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

ATGCAGTCTCTGAAAGAGGCTCTCATCTCCCACGTTCAATCCATAAAATCTGGTTTAACACTGGGCATTTTCACCTCCAACCAACTCATCCACCATTACTCCAGACATGGCCTCATTCAAGACGCCCAGAAGCTGTTCGACGAAATGCCCCACCGAAACGTCTACTCTTGGAACGCCATAATCTCCACCCACATCAAATCACGCAACTTGGAACGTGCCCGGCACCTATTCGACGCTGCTTCTTTCAAAGATTTGGTCACTTACAACTCTATGCTGTCTGGCTACACAAGCACAGAAGGGTACGAGGCTTGTGCGCTTGGGTTGTTTGCCGAAATGCAGTCGCGGGATGATCGGATTAGAGTTGATGAAGTTACTCTAACTACCATGCTTAACTTGAGTGCCAAGTTAGAGGTGGTTTGTTATGGAAAGCAGTTGCATTCGTGTATGGTGAGAACTGCCAATGATCTGAGTGGGTTTGCGGTGAGCTCTTTAATTGATATGTACTCTAAGTGCGGGTGTTTTCGTTATGCTTGGCGCGTGTTTAGTGGATATAGAGGGATGGTTGACTCGGTTTCGAAGAATGCAATGGTGGCAGCTTGTTGTAGAGAAGGCAAATTGGATATGGCGGTTGATCTTTTTTGGAGAGAACCGGAGATGAACGATACTGTGTCTTGGAACACAATGATTTCAGGGTATGTGCAGAATGGTTTTGTAGAGGAGGCACTGAATTTGTTTGTTTGCATGGCGGAAGATGGATTTCGATGGAATGAGCATACTTTTGCTAGTGTTTTGAGTGCTTGCTCTGGTTTGAGGAACTTCAAACTAGGAAAGGAAGTCCATGGTTGGGTGTTGAAGAATGGGATGAGTTCTAATCCGTTTATAAGTAGTGGCATTGTTGATGTCTATTGTAAGTGTGGAAATATGAGTTATGCAAAGTCAGTTCATGCAGCAATGGGAATTAGAAATTCTTTTTCAATCACTTCATTGATCTCGGGTCATGCCTCTCAAGGTAACCTAGTAGAAGCAAGGTTACTTTTTGATTCATTGGCTGAAAGGAGTATGGTTGTATGGACAGCTTTGTTTTCTGGATATCTCAAATCACAACAATTTGAAGCTGTATTTAAGCTTTTGAGCGAATTCAGGGAAAAGGAAGTAATTGTTCCTGATGCTTTGATTCTCATTAGTGTGCTTGGTGCCTGTGCAATTCAAGCTGCCCTGGACCCTGGGAAGCAGATTCATGCTTACATCTTGAGGAATAACATTGAAGGAGACAAGAAATTGTTCAGTGCTTTGATTGATATGTACTCAAAATCTGGGAATATTTCTTATGCGGAAAAGATTTTTAAAAGTGTTTTTGACAGAGATATAATCGTTTACAATGTGATATTAGCTGGTTATGCTCACCATGGTTGTGAAGCTAAAGCTATCCAAATCTTCAAAGAACTGTTGAAGAGAGGTATTAGGCCTGATGCAGTCACATTTTTAGCACTTCTTTCAGCTTGTCGTCACTCTTGTTTGGTGGAATTGGAAGGCAAAAGCATTGATAAGAAATATCCGTATAGAATTGGATACCAGTGTATGGGGGCATTCCTGAATGCTTGTCGGGTAAATGGAAATACAATACTTGCTAGAGAGGCAGAGGAGAGACTTATAGAACTTGGAGGAGGTACTGGTGATCGGTATGTGCAGTTGGCAAATTTCTATGCTGCTGAGGGAAACTGGAAGGAGGTTGGGAGATTAAGGAAGAAGATGAAAGGGAAAGAGGTCAAGAAGGCTGCTGGTTGCAGTTGGTTATATGTGGATAATGGAGTTCATATATTTATTTCTGGTGATAAAAGTCACCCAAAAACAGAGAATATATATTTTACCTTAGCATCCTTGACTGAAGAGCTATATCAGATATCTGGGGAATCTATTGAGGTCATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PfkB TB2_DP1_HVA22

Protein Analysis

643

Amino Acids

71.91

Weight (kDa)

8.16

Isoelectric Point (pI)

33.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	221 - 267	1.1e-10	PPR repeat family
PPR	PF01535	223 - 253	1.6e-09	PPR repeat
PPR_2	PF13041	455 - 501	2.2e-10	PPR repeat family
PPR_3	PF13812	455 - 501	3e-06	Pentatricopeptide repeat domain
E_motif	PF20431	542 - 598	2.5e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18840 AT3G18840
fragaria_vesca	FvH4_2g08350
malus_domestica	MD10G1080500.v1.1
prunus_persica	Prupe.8G101800_v2.0.a1
pyrus_communis	pycom10g06370
rosa_chinensis	RchiOBHm_Chr6g0263351
rosa_laevigata	RLG00000014350 RLG00000014352 RLG00000014358 RLG00000014361
rosa_multiflora	Rmu_sc0000565.1_g000003 Rmu_sc0000565.1_g000007 Rmu_sc0003785.1_g000002
rosa_roxburghii	Rroxscaffold_176G00431070 Rroxscaffold_7G00204480
rosa_rugosa	Rorug06G0004400 Rorug06G0004500 Rorug06G0004600 Rorug06G0004900
rosa_samantha	Rh6AG124100 Rh6BG118900 Rh6BG119400 Rh6CG116900 Rh6CG117400 Rh6DG105600 Rh6DG106100
rosa_wichuraiana	Rw6G010650 Rw6G010790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	881
AccB1I	GGYRCC	2 cut(s)	222, 1193
AccB7I	CCANNNNNTGG	1 cut(s)	1579
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	2 cut(s)	343, 537
AciI	CCGC	6 cut(s)	343, 479, 513, 626, 746, 1331
AcsI	RAATTY	4 cut(s)	727, 964, 1136, 1696
AcuI	CTGAAG	1 cut(s)	1905
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	4 cut(s)	302, 503, 1304, 1669
AfiI	CCNNNNNNNGG	2 cut(s)	844, 1579
AjnI	CCWGG	2 cut(s)	1215, 1222
Alw21I	GWGCWC	1 cut(s)	488
Alw26I	GTCTC	3 cut(s)	12, 1263, 1639
AlwNI	CAGNNNCTG	2 cut(s)	10, 133
Ama87I	CYCGRG	1 cut(s)	991
AoxI	GGCC	2 cut(s)	109, 1463
ApeKI	GCWGC	6 cut(s)	236, 593, 947, 1211, 1706, 1775
ApoI	RAATTY	4 cut(s)	727, 964, 1136, 1696
ArsI	GACNNNNNNTTYG	2 cut(s)	240, 272
Asp700I	GAANNNNTTC	2 cut(s)	134, 1280
AspLEI	GCGC	2 cut(s)	316, 537
AspS9I	GGNCC	1 cut(s)	1219
AsuC2I	CCSGG	1 cut(s)	220
AsuHPI	GGTGA	7 cut(s)	64, 460, 493, 1394, 1685, 1832, 1841
AsuII	TTCGAA	1 cut(s)	575
AvaI	CYCGRG	1 cut(s)	991
AvaII	GGWCC	1 cut(s)	1219
BaeGI	GKGCMC	1 cut(s)	220
BaeI	ACNNNNGTAYC	2 cut(s)	1561, 1594
BanI	GGYRCC	2 cut(s)	222, 1193
BanII	GRGCYC	1 cut(s)	488
BarI	GAAGNNNNNNTAC	2 cut(s)	1014, 1046
Bbv12I	GWGCWC	1 cut(s)	488
BbvCI	CCTCAGC	1 cut(s)	1710
BbvI	GCAGC	6 cut(s)	223, 605, 959, 1198, 1693, 1762
BccI	CCATC	3 cut(s)	553, 746, 756
BcgI	CGANNNNNNTGC	2 cut(s)	293, 327
BciT130I	CCWGG	2 cut(s)	1217, 1224
BciVI	GTATCC	1 cut(s)	1562
BcnI	CCSGG	1 cut(s)	220
BcoDI	GTCTC	3 cut(s)	12, 1263, 1639
BfaI	CTAG	4 cut(s)	783, 824, 1016, 1629
BfuI	GTATCC	1 cut(s)	1562
BisI	GCNGC	6 cut(s)	237, 594, 948, 1212, 1707, 1776
BlsI	GCNGC	6 cut(s)	238, 595, 949, 1213, 1708, 1777
Bme1390I	CCNGG	3 cut(s)	220, 1217, 1224
Bme18I	GGWCC	1 cut(s)	1219
BmeT110I	CYCGRG	1 cut(s)	991
BmgT120I	GGNCC	1 cut(s)	1219
BmiI	GGNNCC	3 cut(s)	224, 1195, 1221
BmrFI	CCNGG	3 cut(s)	220, 1217, 1224
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	3 cut(s)	1156, 1459, 1883
BmuI	ACTGGG	1 cut(s)	71
BpmI	CTGGAG	1 cut(s)	85
Bpu10I	CCTNAGC	2 cut(s)	1710, 1870
Bpu14I	TTCGAA	1 cut(s)	575
BpuEI	CTTGAG	3 cut(s)	415, 990, 1270
BpuMI	CCSGG	1 cut(s)	220
BsaHI	GRCGYC	1 cut(s)	123
BsaJI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BsaWI	WCCGGW	1 cut(s)	649
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	2 cut(s)	844, 1579
Bse1I	ACTGG	4 cut(s)	66, 1573, 1675, 1724
Bse3DI	GCAATG	2 cut(s)	591, 957
BseBI	CCWGG	2 cut(s)	1217, 1224
BseDI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BseGI	GGATG	5 cut(s)	87, 352, 564, 867, 1874
BseLI	CCNNNNNNNGG	2 cut(s)	844, 1579
BseMI	GCAATG	2 cut(s)	591, 957
BseMII	CTCAG	2 cut(s)	458, 1701
BseNI	ACTGG	4 cut(s)	66, 1573, 1675, 1724
BseRI	GAGGAG	3 cut(s)	731, 1655, 1677
BseSI	GKGCMC	1 cut(s)	220
BseXI	GCAGC	6 cut(s)	223, 605, 959, 1198, 1693, 1762
BsgI	GTGCAG	2 cut(s)	719, 1706
Bsh1236I	CGCG	2 cut(s)	343, 537
BshFI	GGCC	2 cut(s)	111, 1465
BshNI	GGYRCC	2 cut(s)	222, 1193
BsiHKAI	GWGCWC	1 cut(s)	488
BsiHKCI	CYCGRG	1 cut(s)	991
BsiSI	CCGG	2 cut(s)	220, 650
BslI	CCNNNNNNNGG	2 cut(s)	844, 1579
BsmAI	GTCTC	3 cut(s)	12, 1263, 1639
BsmI	GAATGC	4 cut(s)	436, 586, 1586, 1600
BsnI	GGCC	2 cut(s)	111, 1465
BsoBI	CYCGRG	1 cut(s)	991
Bsp119I	TTCGAA	1 cut(s)	575
Bsp1286I	GDGCHC	2 cut(s)	220, 488
Bsp143I	GATC	5 cut(s)	349, 463, 631, 987, 1675
Bsp19I	CCATGG	2 cut(s)	838, 1405
BspACI	CCGC	6 cut(s)	343, 479, 513, 626, 746, 1331
BspANI	GGCC	2 cut(s)	111, 1465
BspCNI	CTCAG	2 cut(s)	459, 1702
BspFNI	CGCG	2 cut(s)	343, 537
BspLI	GGNNCC	3 cut(s)	224, 1195, 1221
BspQI	GCTCTTC	1 cut(s)	1881
BspT104I	TTCGAA	1 cut(s)	575
BspT107I	GGYRCC	2 cut(s)	222, 1193
BsrDI	GCAATG	2 cut(s)	591, 957
BsrI	ACTGG	4 cut(s)	66, 1573, 1675, 1724
BssECI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BssMI	GATC	5 cut(s)	349, 463, 631, 987, 1675
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	2 cut(s)	838, 1405
Bst2UI	CCWGG	2 cut(s)	1217, 1224
Bst4CI	ACNGT	2 cut(s)	667, 1446
Bst6I	CTCTTC	2 cut(s)	1445, 1881
BstACI	GRCGYC	1 cut(s)	123
BstBI	TTCGAA	1 cut(s)	575
BstC8I	GCNNGC	1 cut(s)	799
BstDEI	CTNAG	4 cut(s)	467, 507, 1710, 1870
BstDSI	CCRYGG	2 cut(s)	838, 1405
BstEII	GGTNACC	1 cut(s)	1010
BstF5I	GGATG	5 cut(s)	87, 352, 564, 867, 1874
BstFNI	CGCG	2 cut(s)	343, 537
BstHHI	GCGC	2 cut(s)	316, 537
BstKTI	GATC	5 cut(s)	352, 466, 634, 990, 1678
BstMAI	GTCTC	3 cut(s)	12, 1263, 1639
BstMBI	GATC	5 cut(s)	349, 463, 631, 987, 1675
BstMWI	GCNNNNNNNGC	5 cut(s)	288, 590, 1208, 1397, 1634
BstNI	CCWGG	2 cut(s)	1217, 1224
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	3 cut(s)	218, 1215, 1222
BstSLI	GKGCMC	1 cut(s)	220
BstUI	CGCG	2 cut(s)	343, 537
BstV1I	GCAGC	6 cut(s)	223, 605, 959, 1198, 1693, 1762
BsuI	GTATCC	1 cut(s)	1562
BsuRI	GGCC	2 cut(s)	111, 1465
BtgI	CCRYGG	2 cut(s)	838, 1405
BtsCI	GGATG	5 cut(s)	87, 352, 564, 867, 1874
BtsIMutI	CAGTG	4 cut(s)	59, 722, 1291, 1580
Cac8I	GCNNGC	1 cut(s)	799
CaiI	CAGNNNCTG	2 cut(s)	10, 133
CfoI	GCGC	2 cut(s)	316, 537
Cfr13I	GGNCC	1 cut(s)	1219
CseI	GACGC	2 cut(s)	131, 242
Csp6I	GTAC	4 cut(s)	301, 502, 1303, 1668
CviAII	CATG	8 cut(s)	107, 385, 742, 839, 944, 998, 1238, 1406
CviQI	GTAC	4 cut(s)	301, 502, 1303, 1668
DdeI	CTNAG	4 cut(s)	467, 507, 1710, 1870
DpnI	GATC	5 cut(s)	351, 465, 633, 989, 1677
DpnII	GATC	5 cut(s)	349, 463, 631, 987, 1675
DraI	TTTAAA	1 cut(s)	1345
Eam1104I	CTCTTC	2 cut(s)	1445, 1881
EarI	CTCTTC	2 cut(s)	1445, 1881
EciI	GGCGGA	1 cut(s)	761
Ecl136II	GAGCTC	1 cut(s)	486
Eco130I	CCWWGG	2 cut(s)	838, 1405
Eco147I	AGGCCT	1 cut(s)	1465
Eco24I	GRGCYC	1 cut(s)	488
Eco32I	GATATC	2 cut(s)	1091, 1902
Eco47I	GGWCC	1 cut(s)	1219
Eco53kI	GAGCTC	1 cut(s)	486
Eco57I	CTGAAG	1 cut(s)	1905
Eco88I	CYCGRG	1 cut(s)	991
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	486
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRI	GAATTC	1 cut(s)	1136
EcoRII	CCWGG	2 cut(s)	1215, 1222
EcoRV	GATATC	2 cut(s)	1091, 1902
EcoT14I	CCWWGG	2 cut(s)	838, 1405
EcoT38I	GRGCYC	1 cut(s)	488
ErhI	CCWWGG	2 cut(s)	838, 1405
FaeI	CATG	8 cut(s)	110, 388, 745, 842, 947, 1001, 1241, 1409
FatI	CATG	8 cut(s)	106, 384, 741, 838, 943, 997, 1237, 1405
FauI	CCCGC	2 cut(s)	336, 506
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	6 cut(s)	237, 594, 948, 1212, 1707, 1776
FokI	GGATG	5 cut(s)	74, 359, 571, 874, 1861
FriOI	GRGCYC	1 cut(s)	488
Fsp4HI	GCNGC	6 cut(s)	237, 594, 948, 1212, 1707, 1776
FspBI	CTAG	4 cut(s)	783, 824, 1016, 1629
GlaI	GCGC	2 cut(s)	315, 536
GluI	GCNGC	6 cut(s)	237, 594, 948, 1212, 1707, 1776
GsuI	CTGGAG	1 cut(s)	85
HaeIII	GGCC	2 cut(s)	111, 1465
HapII	CCGG	2 cut(s)	220, 650
HgaI	GACGC	2 cut(s)	131, 242
HhaI	GCGC	2 cut(s)	316, 537
Hin1I	GRCGYC	1 cut(s)	123
Hin1II	CATG	8 cut(s)	110, 388, 745, 842, 947, 1001, 1241, 1409
Hin6I	GCGC	2 cut(s)	314, 535
HinP1I	GCGC	2 cut(s)	314, 535
HincII	GTYRAC	1 cut(s)	565
HindII	GTYRAC	1 cut(s)	565
HindIII	AAGCTT	1 cut(s)	1124
HinfI	GANTC	5 cut(s)	566, 1040, 1174, 1234, 1910
HpaII	CCGG	2 cut(s)	220, 650
HphI	GGTGA	7 cut(s)	64, 460, 493, 1394, 1685, 1832, 1841
Hpy166II	GTNNAC	3 cut(s)	163, 565, 1375
Hpy188I	TCNGA	4 cut(s)	12, 354, 468, 1899
Hpy188III	TCNNGA	7 cut(s)	102, 119, 1086, 1163, 1249, 1591, 1768
Hpy8I	GTNNAC	3 cut(s)	163, 565, 1375
Hpy99I	CGWCG	2 cut(s)	143, 236
HpyAV	CCTTC	6 cut(s)	290, 602, 1259, 1523, 1717, 1765
HpyCH4III	ACNGT	2 cut(s)	667, 1446
HpyCH4IV	ACGT	3 cut(s)	33, 159, 214
HpyF10VI	GCNNNNNNNGC	5 cut(s)	288, 590, 1208, 1397, 1634
HpyF3I	CTNAG	4 cut(s)	467, 507, 1710, 1870
HpySE526I	ACGT	3 cut(s)	33, 159, 214
Hsp92I	GRCGYC	1 cut(s)	123
Hsp92II	CATG	8 cut(s)	110, 388, 745, 842, 947, 1001, 1241, 1409
HspAI	GCGC	2 cut(s)	314, 535
Kzo9I	GATC	5 cut(s)	349, 463, 631, 987, 1675
LguI	GCTCTTC	1 cut(s)	1881
Lsp1109I	GCAGC	6 cut(s)	223, 605, 959, 1198, 1693, 1762
LweI	GCATC	3 cut(s)	1156, 1459, 1883
MaeI	CTAG	4 cut(s)	783, 824, 1016, 1629
MaeII	ACGT	3 cut(s)	33, 159, 214
MaeIII	GTNAC	7 cut(s)	256, 370, 1010, 1029, 1474, 1505, 1838
MalI	GATC	5 cut(s)	351, 465, 633, 989, 1677
MboI	GATC	5 cut(s)	349, 463, 631, 987, 1675
MboII	GAAGA	8 cut(s)	589, 761, 865, 1426, 1462, 1756, 1759, 1898
MhlI	GDGCHC	2 cut(s)	220, 488
MlyI	GAGTC	1 cut(s)	560
MmeI	TCCRAC	1 cut(s)	102
MroXI	GAANNNNTTC	2 cut(s)	134, 1280
MseI	TTAA	6 cut(s)	56, 390, 491, 1122, 1344, 1739
MslI	CAYNNNNRTG	2 cut(s)	1184, 1410
MspI	CCGG	2 cut(s)	220, 650
MspR9I	CCNGG	3 cut(s)	220, 1217, 1224
Mva1269I	GAATGC	4 cut(s)	436, 586, 1586, 1600
MvaI	CCWGG	2 cut(s)	1217, 1224
MvnI	CGCG	2 cut(s)	343, 537
MwoI	GCNNNNNNNGC	5 cut(s)	288, 590, 1208, 1397, 1634
NciI	CCSGG	1 cut(s)	220
NcoI	CCATGG	2 cut(s)	838, 1405
NdeII	GATC	5 cut(s)	349, 463, 631, 987, 1675
NlaIII	CATG	8 cut(s)	110, 388, 745, 842, 947, 1001, 1241, 1409
NlaIV	GGNNCC	3 cut(s)	224, 1195, 1221
NmuCI	GTSAC	4 cut(s)	256, 1474, 1505, 1838
NspV	TTCGAA	1 cut(s)	575
PasI	CCCWGGG	1 cut(s)	1223
PceI	AGGCCT	1 cut(s)	1465
PciSI	GCTCTTC	1 cut(s)	1881
PctI	GAATGC	4 cut(s)	436, 586, 1586, 1600
PdmI	GAANNNNTTC	2 cut(s)	134, 1280
PfeI	GAWTC	4 cut(s)	1040, 1174, 1234, 1910
PflMI	CCANNNNNTGG	1 cut(s)	1579
PkrI	GCNGC	6 cut(s)	238, 595, 949, 1213, 1708, 1777
PleI	GAGTC	1 cut(s)	560
PpsI	GAGTC	1 cut(s)	560
PsiI	TTATAA	1 cut(s)	881
Psp124BI	GAGCTC	1 cut(s)	488
Psp6I	CCWGG	2 cut(s)	1215, 1222
PspEI	GGTNACC	1 cut(s)	1010
PspGI	CCWGG	2 cut(s)	1215, 1222
PspN4I	GGNNCC	3 cut(s)	224, 1195, 1221
PspPI	GGNCC	1 cut(s)	1219
PstNI	CAGNNNCTG	2 cut(s)	10, 133
RsaI	GTAC	4 cut(s)	302, 503, 1304, 1669
RsaNI	GTAC	4 cut(s)	301, 502, 1303, 1668
RseI	CAYNNNNRTG	2 cut(s)	1184, 1410
SacI	GAGCTC	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	1881
SaqAI	TTAA	6 cut(s)	56, 390, 491, 1122, 1344, 1739
SatI	GCNGC	6 cut(s)	237, 594, 948, 1212, 1707, 1776
Sau3AI	GATC	5 cut(s)	349, 463, 631, 987, 1675
Sau96I	GGNCC	1 cut(s)	1219
SchI	GAGTC	1 cut(s)	560
ScrFI	CCNGG	3 cut(s)	220, 1217, 1224
SduI	GDGCHC	2 cut(s)	220, 488
SfaNI	GCATC	3 cut(s)	1156, 1459, 1883
SfuI	TTCGAA	1 cut(s)	575
SinI	GGWCC	1 cut(s)	1219
SmiMI	CAYNNNNRTG	2 cut(s)	1184, 1410
SmlI	CTYRAG	3 cut(s)	394, 1005, 1249
SmoI	CTYRAG	3 cut(s)	394, 1005, 1249
SseBI	AGGCCT	1 cut(s)	1465
SsiI	CCGC	6 cut(s)	343, 479, 513, 626, 746, 1331
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	4 cut(s)	783, 824, 1016, 1629
SstI	GAGCTC	1 cut(s)	488
StuI	AGGCCT	1 cut(s)	1465
StyD4I	CCNGG	3 cut(s)	218, 1215, 1222
StyI	CCWWGG	2 cut(s)	838, 1405
TaaI	ACNGT	2 cut(s)	667, 1446
TaiI	ACGT	3 cut(s)	36, 162, 217
TaqI	TCGA	4 cut(s)	138, 231, 575, 760
TatI	WGTACW	2 cut(s)	501, 1302
TfiI	GAWTC	4 cut(s)	1040, 1174, 1234, 1910
Tru1I	TTAA	6 cut(s)	56, 390, 491, 1122, 1344, 1739
Tru9I	TTAA	6 cut(s)	56, 390, 491, 1122, 1344, 1739
TscAI	CASTG	4 cut(s)	66, 729, 1291, 1580
TseFI	GTSAC	4 cut(s)	256, 1474, 1505, 1838
TseI	GCWGC	6 cut(s)	236, 593, 947, 1211, 1706, 1775
Tsp45I	GTSAC	4 cut(s)	256, 1474, 1505, 1838
TspDTI	ATGAA	8 cut(s)	381, 671, 932, 972, 1032, 1226, 1766, 1802
TspGWI	ACGGA	2 cut(s)	864, 1545
TspRI	CASTG	4 cut(s)	66, 729, 1291, 1580
Van91I	CCANNNNNTGG	1 cut(s)	1579
VpaK11BI	GGWCC	1 cut(s)	1219
XapI	RAATTY	4 cut(s)	727, 964, 1136, 1696
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	2 cut(s)	134, 1280
XspI	CTAG	4 cut(s)	783, 824, 1016, 1629

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.