Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0005291

Physical Location & Seq

Genomic Coordinates Reverse (-)

18537927 .. 18539693

Gene Structure 1767 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG119400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGCTCTCTGGCTACGCAAGCACAGAAGGTTACGAGGATTGTGCGATTGGGTTGTTTGCCGAAATGCAGTCGCTGGATGATCGGATTAGAGTTGATGAGGTTACTCTAACTACCATGCTTAACTTGAGTGCCAAGTTAGAGGTGGTTTGTTATGGAAAGCAGTTGCATTCGTGTACGGTGAGAACTGCCAATGATCTGAGTGGGTTTGCGGTGAGCTCTTTAATTGATATGTACTCTAAGTGCGGGTGTTTTTGTTATGCTTGGCGCGTGTTTAGTGGATATAGAGGGATGGTTGACTCGGTTTCGAAGAATGCAATGGTGGCAGCTTGTTGTAGAGAAGGAAAATTGGATATGGCGGTTGATCTTTTTTGGAGAGAACCGGAGATTAACGATACTGTGTCTTGGAACACAATGATTTCAGGGTATGTGCAGAATGGTTTTTTAGACGAGACACTGAATTTGTTTGTTCGCATGGCGGAAGATGGATTTCAATGGAATGAGCATACTTTTGCTAGTGTTTTGAGTGCTTGCTCTGGTTTGAGGAGCTTTAAACTTGGAAAGGAAGTCCATGGTTTTGTGTTGAAGAATGGGATGAGTTCTAATCCGTTTATAAGTAGTGGGATTGTTGATGTCTATTGTAAGTGTGGAAATATGAGTTATGCAAAGTCAGTTCATGCAGCAGTGGGAATTAGAAATTCGTTTTCAATCACTTCATTGATCTCGGGTCATGCCTCTCAAGGTAACCTAGTAGAAGCAAGGTTACTTTTTGATTCATTGGCTGAAAGGAGTATGGTTGTATGGACAGCTTTGTTTTCTGGATATCTCAAATCACAACAATTTGAAGCTGTATTTAAGCTTTTGAGTGAGTTCAGGGAAAAGGAAGTAATTGTTCTTGATGCTTTGATTCTCATTAGTGTGCTTGGTGCCTGTGCAATTCAAGCTGCCCTGGACCCTGGGAAGCAGATTCATGCTTACATCTTCAGGAATAACATTGAAGGAGACAAGAAATTGTTCAGTGCTTTGATTGATATGTACTCAAAATCTGGGAATATTACTTATGCGGAAAAGATTTTTAAAAGTGTTTTTGACACAGATATAATCGTTTACAATGTGATATTAGCTGGTTATGCTCACCATGGTTGTGAAACTAAAGCTATCCAAATCTTCAAAGAACTGTTGAAGAGAGGTATTAGGCCTGATGCAGTCACATTTTTAGCACTTCTTTCAGCTTGTCGTCACTCTTGTTTGGTGGAATTGGGTGAGCAATTTTTCTGGTCCATGACAAAAGATTATAACCTATTGCTTGAACTGGATCACTATGCATGTATGATTGACTTGTATGGCAGGGCTGATCAACTTGAGAAGGCAAAAGCACTGATAAGAAATATCCGTATAGAATTGGATACCAGTGTATGGGGGGCATTCCTGAATGCTTGTCGGGTAAATGGAAATACAATACTTGCTAGAGAGGCAGAGGAGAGACTTCTAGAACTTGGAGGAGGTGCCGGTGATCGGTATGTGCAGTTGGCTAATTTCTATGCCGCTGAGGGAAACTGGAAGGAGGTTGGGAGATTAAGGAAGAAGATGAAAGGGAAAGAGGTCAAGAAGACTGCTGGTTGCAGTTGGTTATACGTGGATAATGGAGTTCATATATTTATTTCTGGTGATAAAAGTCACCCAAAAACAGAGAATATATATTTTAACTTAGCATCCTTGACTGAAGAGCTATATCTGATATCTGGGGAATCTATTGAGGTCATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PfkB TB2_DP1_HVA22

Protein Analysis

588

Amino Acids

65.57

Weight (kDa)

5.92

Isoelectric Point (pI)

31.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	131 - 177	4.6e-10	PPR repeat family
PPR	PF01535	133 - 163	3.9e-08	PPR repeat
PPR_3	PF13812	364 - 411	1.5e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	365 - 411	2.8e-10	PPR repeat family
E_motif	PF20431	487 - 543	1.1e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18840 AT3G18840
fragaria_vesca	FvH4_2g08350
malus_domestica	MD10G1080500.v1.1
prunus_persica	Prupe.8G101800_v2.0.a1
pyrus_communis	pycom10g06370
rosa_chinensis	RchiOBHm_Chr6g0263351
rosa_laevigata	RLG00000014350 RLG00000014352 RLG00000014358 RLG00000014361
rosa_multiflora	Rmu_sc0000565.1_g000003 Rmu_sc0000565.1_g000007 Rmu_sc0003785.1_g000002
rosa_roxburghii	Rroxscaffold_176G00431070 Rroxscaffold_7G00204480
rosa_rugosa	Rorug06G0004400 Rorug06G0004500 Rorug06G0004600 Rorug06G0004900
rosa_samantha	Rh6AG124100 Rh6BG118900 Rh6BG119400 Rh6CG116900 Rh6CG117400 Rh6DG105600 Rh6DG106100
rosa_wichuraiana	Rw6G010650 Rw6G010790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	611, 1293
AccB1I	GGYRCC	2 cut(s)	923, 1502
AccB7I	CCANNNNNTGG	1 cut(s)	1413
AccII	CGCG	1 cut(s)	267
AciI	CCGC	6 cut(s)	209, 243, 356, 476, 1061, 1542
AclWI	GGATC	1 cut(s)	1320
AcsI	RAATTY	2 cut(s)	457, 694
AcuI	CTGAAG	2 cut(s)	964, 1740
AfaI	GTAC	3 cut(s)	175, 233, 1034
AfiI	CCNNNNNNNGG	2 cut(s)	1413, 1512
AgsI	TTSAA	9 cut(s)	491, 583, 705, 842, 938, 995, 1168, 1180, 1307
AjnI	CCWGG	2 cut(s)	945, 952
Alw21I	GWGCWC	1 cut(s)	218
Alw26I	GTCTC	3 cut(s)	443, 993, 1474
AlwI	GGATC	1 cut(s)	1320
AlwNI	CAGNNNCTG	1 cut(s)	73
Ama87I	CYCGRG	1 cut(s)	721
AoxI	GGCC	1 cut(s)	1193
ApeKI	GCWGC	3 cut(s)	323, 677, 941
ApoI	RAATTY	2 cut(s)	457, 694
ArsI	GACNNNNNNTTYG	2 cut(s)	442, 474
Asp700I	GAANNNNTTC	1 cut(s)	1010
AspLEI	GCGC	1 cut(s)	267
AspS9I	GGNCC	2 cut(s)	949, 1275
AsuHPI	GGTGA	7 cut(s)	190, 223, 1124, 1271, 1520, 1667, 1676
AsuII	TTCGAA	1 cut(s)	305
AvaI	CYCGRG	1 cut(s)	721
AvaII	GGWCC	2 cut(s)	949, 1275
BaeI	ACNNNNGTAYC	2 cut(s)	1395, 1428
BanI	GGYRCC	2 cut(s)	923, 1502
BanII	GRGCYC	1 cut(s)	218
BarI	GAAGNNNNNNTAC	2 cut(s)	744, 776
BbsI	GAAGAC	1 cut(s)	1613
Bbv12I	GWGCWC	1 cut(s)	218
BbvCI	CCTCAGC	1 cut(s)	1545
BbvI	GCAGC	3 cut(s)	335, 689, 928
BccI	CCATC	2 cut(s)	283, 476
BcgI	CGANNNNNNTGC	2 cut(s)	23, 57
BciT130I	CCWGG	2 cut(s)	947, 954
BciVI	GTATCC	1 cut(s)	1396
BclI	TGATCA	1 cut(s)	1351
BcoDI	GTCTC	3 cut(s)	443, 993, 1474
BfaI	CTAG	4 cut(s)	513, 746, 1464, 1487
BfuI	GTATCC	1 cut(s)	1396
BisI	GCNGC	4 cut(s)	324, 678, 942, 1542
BlsI	GCNGC	4 cut(s)	325, 679, 943, 1543
Bme1390I	CCNGG	2 cut(s)	947, 954
Bme18I	GGWCC	2 cut(s)	949, 1275
BmeT110I	CYCGRG	1 cut(s)	721
BmgT120I	GGNCC	2 cut(s)	949, 1275
BmiI	GGNNCC	3 cut(s)	925, 951, 1504
BmrFI	CCNGG	2 cut(s)	947, 954
BmsI	GCATC	3 cut(s)	886, 1189, 1718
BpiI	GAAGAC	1 cut(s)	1613
Bpu10I	CCTNAGC	1 cut(s)	1545
Bpu14I	TTCGAA	1 cut(s)	305
BpuEI	CTTGAG	3 cut(s)	145, 720, 1379
BsaAI	YACGTR	1 cut(s)	1633
BsaJI	CCNNGG	5 cut(s)	568, 945, 952, 953, 1135
BsaWI	WCCGGW	1 cut(s)	379
Bsc4I	CCNNNNNNNGG	2 cut(s)	1413, 1512
Bse118I	RCCGGY	1 cut(s)	1505
Bse1I	ACTGG	3 cut(s)	1314, 1407, 1559
Bse3DI	GCAATG	1 cut(s)	321
BseBI	CCWGG	2 cut(s)	947, 954
BseDI	CCNNGG	5 cut(s)	568, 945, 952, 953, 1135
BseGI	GGATG	4 cut(s)	82, 294, 597, 1709
BseLI	CCNNNNNNNGG	2 cut(s)	1413, 1512
BseMI	GCAATG	1 cut(s)	321
BseMII	CTCAG	2 cut(s)	188, 1536
BseNI	ACTGG	3 cut(s)	1314, 1407, 1559
BseRI	GAGGAG	3 cut(s)	556, 1490, 1512
BseXI	GCAGC	3 cut(s)	335, 689, 928
BsgI	GTGCAG	2 cut(s)	449, 1541
Bsh1236I	CGCG	1 cut(s)	267
BshFI	GGCC	1 cut(s)	1195
BshNI	GGYRCC	2 cut(s)	923, 1502
BsiHKAI	GWGCWC	1 cut(s)	218
BsiHKCI	CYCGRG	1 cut(s)	721
BsiSI	CCGG	2 cut(s)	380, 1506
BslI	CCNNNNNNNGG	2 cut(s)	1413, 1512
BsmAI	GTCTC	3 cut(s)	443, 993, 1474
BsmI	GAATGC	4 cut(s)	166, 316, 1421, 1435
BsnI	GGCC	1 cut(s)	1195
BsoBI	CYCGRG	1 cut(s)	721
Bsp119I	TTCGAA	1 cut(s)	305
Bsp1286I	GDGCHC	1 cut(s)	218
Bsp143I	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
Bsp19I	CCATGG	2 cut(s)	568, 1135
BspACI	CCGC	6 cut(s)	209, 243, 356, 476, 1061, 1542
BspANI	GGCC	1 cut(s)	1195
BspCNI	CTCAG	2 cut(s)	189, 1537
BspFNI	CGCG	1 cut(s)	267
BspLI	GGNNCC	3 cut(s)	925, 951, 1504
BspPI	GGATC	1 cut(s)	1320
BspQI	GCTCTTC	1 cut(s)	1716
BspT104I	TTCGAA	1 cut(s)	305
BspT107I	GGYRCC	2 cut(s)	923, 1502
BsrDI	GCAATG	1 cut(s)	321
BsrFI	RCCGGY	1 cut(s)	1505
BsrI	ACTGG	3 cut(s)	1314, 1407, 1559
BssAI	RCCGGY	1 cut(s)	1505
BssECI	CCNNGG	5 cut(s)	568, 945, 952, 953, 1135
BssMI	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
BssT1I	CCWWGG	2 cut(s)	568, 1135
Bst2UI	CCWGG	2 cut(s)	947, 954
Bst4CI	ACNGT	3 cut(s)	178, 397, 1176
Bst6I	CTCTTC	2 cut(s)	1175, 1716
BstBAI	YACGTR	1 cut(s)	1633
BstBI	TTCGAA	1 cut(s)	305
BstC8I	GCNNGC	2 cut(s)	19, 529
BstDEI	CTNAG	4 cut(s)	197, 237, 1545, 1705
BstDSI	CCRYGG	2 cut(s)	568, 1135
BstEII	GGTNACC	1 cut(s)	740
BstF5I	GGATG	4 cut(s)	82, 294, 597, 1709
BstFNI	CGCG	1 cut(s)	267
BstHHI	GCGC	1 cut(s)	267
BstKTI	GATC	7 cut(s)	82, 196, 364, 720, 1315, 1354, 1513
BstMAI	GTCTC	3 cut(s)	443, 993, 1474
BstMBI	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
BstMWI	GCNNNNNNNGC	5 cut(s)	18, 320, 938, 1127, 1469
BstNI	CCWGG	2 cut(s)	947, 954
BstNSI	RCATGY	1 cut(s)	1326
BstPI	GGTNACC	1 cut(s)	740
BstSCI	CCNGG	2 cut(s)	945, 952
BstUI	CGCG	1 cut(s)	267
BstV1I	GCAGC	3 cut(s)	335, 689, 928
BstV2I	GAAGAC	1 cut(s)	1613
BsuI	GTATCC	1 cut(s)	1396
BsuRI	GGCC	1 cut(s)	1195
BtgI	CCRYGG	2 cut(s)	568, 1135
BtsCI	GGATG	4 cut(s)	82, 294, 597, 1709
BtsI	GCAGTG	1 cut(s)	687
BtsIMutI	CAGTG	5 cut(s)	452, 687, 1021, 1373, 1414
Cac8I	GCNNGC	2 cut(s)	19, 529
CaiI	CAGNNNCTG	1 cut(s)	73
CfoI	GCGC	1 cut(s)	267
Cfr10I	RCCGGY	1 cut(s)	1505
Cfr13I	GGNCC	2 cut(s)	949, 1275
Csp6I	GTAC	3 cut(s)	174, 232, 1033
CviAII	CATG	9 cut(s)	115, 472, 569, 674, 728, 968, 1136, 1279, 1323
CviQI	GTAC	3 cut(s)	174, 232, 1033
DdeI	CTNAG	4 cut(s)	197, 237, 1545, 1705
DpnI	GATC	7 cut(s)	81, 195, 363, 719, 1314, 1353, 1512
DpnII	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
DraI	TTTAAA	2 cut(s)	550, 1075
Eam1104I	CTCTTC	2 cut(s)	1175, 1716
EarI	CTCTTC	2 cut(s)	1175, 1716
EciI	GGCGGA	1 cut(s)	491
Ecl136II	GAGCTC	1 cut(s)	216
Eco130I	CCWWGG	2 cut(s)	568, 1135
Eco147I	AGGCCT	1 cut(s)	1195
Eco24I	GRGCYC	1 cut(s)	218
Eco32I	GATATC	2 cut(s)	821, 1737
Eco47I	GGWCC	2 cut(s)	949, 1275
Eco53kI	GAGCTC	1 cut(s)	216
Eco57I	CTGAAG	2 cut(s)	964, 1740
Eco88I	CYCGRG	1 cut(s)	721
Eco91I	GGTNACC	1 cut(s)	740
EcoICRI	GAGCTC	1 cut(s)	216
EcoO65I	GGTNACC	1 cut(s)	740
EcoRII	CCWGG	2 cut(s)	945, 952
EcoRV	GATATC	2 cut(s)	821, 1737
EcoT14I	CCWWGG	2 cut(s)	568, 1135
EcoT22I	ATGCAT	1 cut(s)	1324
EcoT38I	GRGCYC	1 cut(s)	218
ErhI	CCWWGG	2 cut(s)	568, 1135
FaeI	CATG	9 cut(s)	118, 475, 572, 677, 731, 971, 1139, 1282, 1326
FatI	CATG	9 cut(s)	114, 471, 568, 673, 727, 967, 1135, 1278, 1322
FauI	CCCGC	1 cut(s)	236
FbaI	TGATCA	1 cut(s)	1351
Fnu4HI	GCNGC	4 cut(s)	324, 678, 942, 1542
FokI	GGATG	4 cut(s)	89, 301, 604, 1696
FriOI	GRGCYC	1 cut(s)	218
Fsp4HI	GCNGC	4 cut(s)	324, 678, 942, 1542
FspBI	CTAG	4 cut(s)	513, 746, 1464, 1487
GlaI	GCGC	1 cut(s)	266
GluI	GCNGC	4 cut(s)	324, 678, 942, 1542
HaeIII	GGCC	1 cut(s)	1195
HapII	CCGG	2 cut(s)	380, 1506
HhaI	GCGC	1 cut(s)	267
Hin1II	CATG	9 cut(s)	118, 475, 572, 677, 731, 971, 1139, 1282, 1326
Hin6I	GCGC	1 cut(s)	265
HinP1I	GCGC	1 cut(s)	265
HincII	GTYRAC	1 cut(s)	295
HindII	GTYRAC	1 cut(s)	295
HindIII	AAGCTT	1 cut(s)	854
HinfI	GANTC	5 cut(s)	296, 770, 904, 964, 1745
HpaII	CCGG	2 cut(s)	380, 1506
HphI	GGTGA	7 cut(s)	190, 223, 1124, 1271, 1520, 1667, 1676
Hpy166II	GTNNAC	3 cut(s)	174, 295, 1105
Hpy188I	TCNGA	3 cut(s)	84, 198, 1734
Hpy188III	TCNNGA	6 cut(s)	816, 893, 982, 1426, 1487, 1603
Hpy8I	GTNNAC	3 cut(s)	174, 295, 1105
HpyAV	CCTTC	5 cut(s)	20, 332, 989, 1357, 1552
HpyCH4III	ACNGT	3 cut(s)	178, 397, 1176
HpyCH4IV	ACGT	1 cut(s)	1632
HpyF10VI	GCNNNNNNNGC	5 cut(s)	18, 320, 938, 1127, 1469
HpyF3I	CTNAG	4 cut(s)	197, 237, 1545, 1705
HpySE526I	ACGT	1 cut(s)	1632
Hsp92II	CATG	9 cut(s)	118, 475, 572, 677, 731, 971, 1139, 1282, 1326
HspAI	GCGC	1 cut(s)	265
Ksp22I	TGATCA	1 cut(s)	1351
Kzo9I	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
LguI	GCTCTTC	1 cut(s)	1716
LmnI	GCTCC	1 cut(s)	543
Lsp1109I	GCAGC	3 cut(s)	335, 689, 928
LweI	GCATC	3 cut(s)	886, 1189, 1718
MaeI	CTAG	4 cut(s)	513, 746, 1464, 1487
MaeII	ACGT	1 cut(s)	1632
MaeIII	GTNAC	7 cut(s)	29, 100, 740, 759, 1204, 1235, 1673
MalI	GATC	7 cut(s)	81, 195, 363, 719, 1314, 1353, 1512
MboI	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
MhlI	GDGCHC	1 cut(s)	218
MlyI	GAGTC	1 cut(s)	290
Mph1103I	ATGCAT	1 cut(s)	1324
MroXI	GAANNNNTTC	1 cut(s)	1010
MseI	TTAA	8 cut(s)	120, 221, 387, 549, 852, 1074, 1574, 1701
MslI	CAYNNNNRTG	2 cut(s)	914, 1140
MspA1I	CMGCKG	1 cut(s)	1544
MspI	CCGG	2 cut(s)	380, 1506
MspR9I	CCNGG	2 cut(s)	947, 954
Mva1269I	GAATGC	4 cut(s)	166, 316, 1421, 1435
MvaI	CCWGG	2 cut(s)	947, 954
MvnI	CGCG	1 cut(s)	267
MwoI	GCNNNNNNNGC	5 cut(s)	18, 320, 938, 1127, 1469
NcoI	CCATGG	2 cut(s)	568, 1135
NdeII	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
NlaIII	CATG	9 cut(s)	118, 475, 572, 677, 731, 971, 1139, 1282, 1326
NlaIV	GGNNCC	3 cut(s)	925, 951, 1504
NmuCI	GTSAC	3 cut(s)	1204, 1235, 1673
NsiI	ATGCAT	1 cut(s)	1324
NspI	RCATGY	1 cut(s)	1326
NspV	TTCGAA	1 cut(s)	305
PasI	CCCWGGG	1 cut(s)	953
PceI	AGGCCT	1 cut(s)	1195
PciSI	GCTCTTC	1 cut(s)	1716
PctI	GAATGC	4 cut(s)	166, 316, 1421, 1435
PdmI	GAANNNNTTC	1 cut(s)	1010
PfeI	GAWTC	4 cut(s)	770, 904, 964, 1745
PflMI	CCANNNNNTGG	1 cut(s)	1413
PkrI	GCNGC	4 cut(s)	325, 679, 943, 1543
PleI	GAGTC	1 cut(s)	290
PpsI	GAGTC	1 cut(s)	290
Ppu21I	YACGTR	1 cut(s)	1633
PsiI	TTATAA	2 cut(s)	611, 1293
Psp124BI	GAGCTC	1 cut(s)	218
Psp6I	CCWGG	2 cut(s)	945, 952
PspEI	GGTNACC	1 cut(s)	740
PspGI	CCWGG	2 cut(s)	945, 952
PspN4I	GGNNCC	3 cut(s)	925, 951, 1504
PspPI	GGNCC	2 cut(s)	949, 1275
PstNI	CAGNNNCTG	1 cut(s)	73
RsaI	GTAC	3 cut(s)	175, 233, 1034
RsaNI	GTAC	3 cut(s)	174, 232, 1033
RseI	CAYNNNNRTG	2 cut(s)	914, 1140
SacI	GAGCTC	1 cut(s)	218
SapI	GCTCTTC	1 cut(s)	1716
SaqAI	TTAA	8 cut(s)	120, 221, 387, 549, 852, 1074, 1574, 1701
SatI	GCNGC	4 cut(s)	324, 678, 942, 1542
Sau3AI	GATC	7 cut(s)	79, 193, 361, 717, 1312, 1351, 1510
Sau96I	GGNCC	2 cut(s)	949, 1275
SchI	GAGTC	1 cut(s)	290
ScrFI	CCNGG	2 cut(s)	947, 954
SduI	GDGCHC	1 cut(s)	218
SfaNI	GCATC	3 cut(s)	886, 1189, 1718
SfuI	TTCGAA	1 cut(s)	305
SinI	GGWCC	2 cut(s)	949, 1275
SmiMI	CAYNNNNRTG	2 cut(s)	914, 1140
SmlI	CTYRAG	3 cut(s)	124, 735, 1358
SmoI	CTYRAG	3 cut(s)	124, 735, 1358
SseBI	AGGCCT	1 cut(s)	1195
SsiI	CCGC	6 cut(s)	209, 243, 356, 476, 1061, 1542
SspI	AATATT	1 cut(s)	1051
SspMI	CTAG	4 cut(s)	513, 746, 1464, 1487
SstI	GAGCTC	1 cut(s)	218
StuI	AGGCCT	1 cut(s)	1195
StyD4I	CCNGG	2 cut(s)	945, 952
StyI	CCWWGG	2 cut(s)	568, 1135
TaaI	ACNGT	3 cut(s)	178, 397, 1176
TaiI	ACGT	1 cut(s)	1635
TaqI	TCGA	1 cut(s)	305
TatI	WGTACW	2 cut(s)	231, 1032
TauI	GCSGC	1 cut(s)	1544
TfiI	GAWTC	4 cut(s)	770, 904, 964, 1745
Tru1I	TTAA	8 cut(s)	120, 221, 387, 549, 852, 1074, 1574, 1701
Tru9I	TTAA	8 cut(s)	120, 221, 387, 549, 852, 1074, 1574, 1701
TscAI	CASTG	5 cut(s)	459, 687, 1021, 1380, 1414
TseFI	GTSAC	3 cut(s)	1204, 1235, 1673
TseI	GCWGC	3 cut(s)	323, 677, 941
Tsp45I	GTSAC	3 cut(s)	1204, 1235, 1673
TspDTI	ATGAA	6 cut(s)	662, 702, 762, 956, 1601, 1637
TspGWI	ACGGA	2 cut(s)	594, 1379
TspRI	CASTG	5 cut(s)	459, 687, 1021, 1380, 1414
Van91I	CCANNNNNTGG	1 cut(s)	1413
VpaK11BI	GGWCC	2 cut(s)	949, 1275
XapI	RAATTY	2 cut(s)	457, 694
XbaI	TCTAGA	1 cut(s)	1486
XceI	RCATGY	1 cut(s)	1326
XcmI	CCANNNNNNNNNTGG	1 cut(s)	139
XmnI	GAANNNNTTC	1 cut(s)	1010
XspI	CTAG	4 cut(s)	513, 746, 1464, 1487
Zsp2I	ATGCAT	1 cut(s)	1324

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.