Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0005291

Physical Location & Seq

Genomic Coordinates Reverse (-)

18432624 .. 18434660

Gene Structure 2037 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG118900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

ATGCAGTCTCTGAAAGAGGCTCTCATCTCTCACGTTCAGTCCATAAAATCTGGTTTAACACTGGGCATTTTCACCTCCAACCAACTCATCCACCGTTACTCCAGACATGGCCTCATTCAAGACGCCCAGAAGCTGTTCGACGAAATGCCCCACCGGAACGTCTACTCTTGGAACGCCATAATCTCCACCCACATCAGATCACGCAACTTGCAACAAGCCCGGCAGCTATTCGACACCGCTTCTTTCAAAGATTTGGTCACTTACAACTCCATGCTCTCTGGCTACGCAAGCACAGAAGGTTACGAGGATTGTGCGATTGGGTTGTTTGCCGAAATGCAGTCGCTGGATGATCGGATTAGAGTTGATGAGGTTACTCTAACTACCATGCTTAACTTGAGTGCCAAGTTAGAGGTGGTTTGTTATGGAAAGCAGTTGCATTCGTGTACGGTGAGAACTGCCAATGATCTGAGTGGGTTTGCGGTGAGCTCTTTAATTGATATGTACTCTAAGTGCGGGTGTTTTCGTTATGCTTGGCGCGTGTTTAGTGGATATAGAGGGATGGTTGACTCGGTTTCGAAGAATGCAATGGTGGCAGCTTGTTGTAGAGAAGGAAAATTGGATATGGCGGTTGATCTTTTTTGGAGAGAACCGGAGATTAACGATACTGTTTCTTGGAACACAATGATTTCAGGGTATGTGCAGACTGGTTTTGTAGAGGAGGCATTGAATTTGTTTGTTCGCATGGCGGAAGATGGATTTCGATGGAATGAGCATACTTTTGCTAGTGTTTTGAGTGCTTGCTCTGGTTTGAGGAACTTCAAACTAGGAAAGGAAGTCCATGGTTGGGTGTTGAAGAATGGGATGAGTTCTAATCCGTTTATAAGTAGCGGCATTGTTGATGTCTATTGCAAGTGTGGAAATATGAGTTATGCAAAGTCAGTTCATGCAGCAATGGGAATTAGAAATTCGTTTTCAATCACTTCATTGATCTCGGGTCATACCTCTCAAGGTAACCTAGTAGAAGCAAGGTTACTTTTTGATTCATTGGCTGAAAGGAGTATGGTTGTATGGACAGCTTTGTTTTCTGGATATCTCAAATCACAACAATTTGAAGCTGTATTTAAGCTTTTGAGCGAATTCAGGGAAAAGGAAGTAATTGTTCCCGATGCATTGATTCTCATTAGTGTGCTTGGTGCCTGTGCAATTCAAGCTGCCCTGGACCCTGGGAAGCAGATTCATGCTTACATCTTGAGGAATAACATTGAAGGAGACAAGAAATTGTTCAGTGCTTTGATTGATATGTACTCAAAATCTGGGAATATTACTTATGCGGAAAAGATTTTTAAAAGTGTTTTTGACAGAGATATAATCATATACAATGTGATATTAGCTGGTTATGCTCACCATGGTTGTGAAACTAAAGCTATCCAAATCTTCAAAGAACTGTTGAAGAGAGGTATTACCCCTGATGCAGTCACATTTTTAGCACTTCTTTCAGCTTGTCGTCACTCTTGTTTGGTGGAATTGGGTGAGCAATTTTTCTGGTCCATGACAAAAGATTATAACATATTGCCTGAACTGGATCACTATGCATGTATGATTGACTTGTATGGCAGGGCTGATCAACTTGAGAAGGCAAAAGCATTGATAAGAAATATCCGTATAGAATTGGATACCAGTGTATGGGGGGCATTCCTGAATGCTTGTCGGGTAAATGGAAATACAATACTTGCTAGAGAGGCAGAGGAGAGACTTCTAGAACTTGGAGGAGGTACCGGTGATCGGTATGTGCAGTTGGCTAATTTCTATGCCGCTGAGGGAAACTGGAAGGAGGTTGGGAGATTGAGGAAGAAGATGAAAGGGAAAGAGGTCAAGAAGACTGCTGGTTGCAGTTGGTTATACGTGGATAATGGAGTTCATATATTTATTTCTGGTGATAAAAGTCACCCAAAAACAGATAATATATATTTTACCTTAGCATCCTTGACTGAAGAGCTATATCAGATATCTGGGGAATCTATTGAGGTCATATTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PfkB TB2_DP1_HVA22

Protein Analysis

678

Amino Acids

76.1

Weight (kDa)

6.79

Isoelectric Point (pI)

36.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	221 - 267	6.9e-11	PPR repeat family
PPR	PF01535	223 - 253	2.7e-09	PPR repeat
PPR_2	PF13041	455 - 501	2.2e-10	PPR repeat family
PPR_3	PF13812	455 - 501	3.7e-06	Pentatricopeptide repeat domain
E_motif	PF20431	577 - 633	1.2e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0005291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18840 AT3G18840
fragaria_vesca	FvH4_2g08350
malus_domestica	MD10G1080500.v1.1
prunus_persica	Prupe.8G101800_v2.0.a1
pyrus_communis	pycom10g06370
rosa_chinensis	RchiOBHm_Chr6g0263351
rosa_laevigata	RLG00000014350 RLG00000014352 RLG00000014358 RLG00000014361
rosa_multiflora	Rmu_sc0000565.1_g000003 Rmu_sc0000565.1_g000007 Rmu_sc0003785.1_g000002
rosa_roxburghii	Rroxscaffold_176G00431070 Rroxscaffold_7G00204480
rosa_rugosa	Rorug06G0004400 Rorug06G0004500 Rorug06G0004600 Rorug06G0004900
rosa_samantha	Rh6AG124100 Rh6BG118900 Rh6BG119400 Rh6CG116900 Rh6CG117400 Rh6DG105600 Rh6DG106100
rosa_wichuraiana	Rw6G010650 Rw6G010790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	881, 1563
Acc65I	GGTACC	1 cut(s)	1772
AccB1I	GGYRCC	2 cut(s)	1193, 1772
AccB7I	CCANNNNNTGG	1 cut(s)	1683
AccI	GTMKAC	1 cut(s)	162
AccII	CGCG	1 cut(s)	537
AciI	CCGC	8 cut(s)	237, 479, 513, 626, 746, 888, 1331, 1812
AclWI	GGATC	1 cut(s)	1590
AcsI	RAATTY	3 cut(s)	727, 964, 1136
AcuI	CTGAAG	1 cut(s)	2010
AcyI	GRCGYC	1 cut(s)	123
AfaI	GTAC	4 cut(s)	445, 503, 1304, 1774
AfiI	CCNNNNNNNGG	3 cut(s)	844, 1683, 1782
AgeI	ACCGGT	1 cut(s)	1775
AjnI	CCWGG	2 cut(s)	1215, 1222
Alw21I	GWGCWC	1 cut(s)	488
Alw26I	GTCTC	3 cut(s)	12, 1263, 1744
AlwI	GGATC	1 cut(s)	1590
AlwNI	CAGNNNCTG	3 cut(s)	10, 133, 343
Ama87I	CYCGRG	1 cut(s)	991
AoxI	GGCC	1 cut(s)	109
ApeKI	GCWGC	4 cut(s)	223, 593, 947, 1211
ApoI	RAATTY	3 cut(s)	727, 964, 1136
ArsI	GACNNNNNNTTYG	2 cut(s)	240, 272
AsiGI	ACCGGT	1 cut(s)	1775
Asp700I	GAANNNNTTC	2 cut(s)	134, 1280
Asp718I	GGTACC	1 cut(s)	1772
AspLEI	GCGC	1 cut(s)	537
AspS9I	GGNCC	2 cut(s)	1219, 1545
AsuC2I	CCSGG	1 cut(s)	220
AsuHPI	GGTGA	8 cut(s)	64, 460, 493, 1394, 1541, 1790, 1937, 1946
AsuII	TTCGAA	1 cut(s)	575
AvaI	CYCGRG	1 cut(s)	991
AvaII	GGWCC	2 cut(s)	1219, 1545
BaeI	ACNNNNGTAYC	2 cut(s)	1665, 1698
BanI	GGYRCC	2 cut(s)	1193, 1772
BanII	GRGCYC	1 cut(s)	488
BarI	GAAGNNNNNNTAC	2 cut(s)	1014, 1046
BbsI	GAAGAC	1 cut(s)	1883
Bbv12I	GWGCWC	1 cut(s)	488
BbvCI	CCTCAGC	1 cut(s)	1815
BbvI	GCAGC	4 cut(s)	235, 605, 959, 1198
BccI	CCATC	3 cut(s)	553, 746, 756
BcgI	CGANNNNNNTGC	2 cut(s)	293, 327
BciT130I	CCWGG	2 cut(s)	1217, 1224
BciVI	GTATCC	1 cut(s)	1666
BclI	TGATCA	1 cut(s)	1621
BcnI	CCSGG	1 cut(s)	220
BcoDI	GTCTC	3 cut(s)	12, 1263, 1744
BfaI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
BfuI	GTATCC	1 cut(s)	1666
BisI	GCNGC	6 cut(s)	224, 594, 889, 948, 1212, 1812
BlsI	GCNGC	6 cut(s)	225, 595, 890, 949, 1213, 1813
Bme1390I	CCNGG	3 cut(s)	220, 1217, 1224
Bme18I	GGWCC	2 cut(s)	1219, 1545
BmeT110I	CYCGRG	1 cut(s)	991
BmgT120I	GGNCC	2 cut(s)	1219, 1545
BmiI	GGNNCC	3 cut(s)	1195, 1221, 1774
BmrFI	CCNGG	3 cut(s)	220, 1217, 1224
BmrI	ACTGGG	1 cut(s)	71
BmsI	GCATC	3 cut(s)	1156, 1459, 1988
BmuI	ACTGGG	1 cut(s)	71
BpiI	GAAGAC	1 cut(s)	1883
BpmI	CTGGAG	1 cut(s)	85
Bpu10I	CCTNAGC	2 cut(s)	1815, 1975
Bpu14I	TTCGAA	1 cut(s)	575
BpuEI	CTTGAG	4 cut(s)	415, 990, 1270, 1649
BpuMI	CCSGG	1 cut(s)	220
BsaAI	YACGTR	1 cut(s)	1903
BsaHI	GRCGYC	1 cut(s)	123
BsaJI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BsaWI	WCCGGW	3 cut(s)	153, 649, 1775
BsaXI	ACNNNNNCTCC	2 cut(s)	83, 113
Bsc4I	CCNNNNNNNGG	3 cut(s)	844, 1683, 1782
Bse118I	RCCGGY	1 cut(s)	1775
Bse1I	ACTGG	5 cut(s)	66, 709, 1584, 1677, 1829
Bse3DI	GCAATG	2 cut(s)	591, 957
BseBI	CCWGG	2 cut(s)	1217, 1224
BseDI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BseGI	GGATG	5 cut(s)	87, 352, 564, 867, 1979
BseLI	CCNNNNNNNGG	3 cut(s)	844, 1683, 1782
BseMI	GCAATG	2 cut(s)	591, 957
BseMII	CTCAG	2 cut(s)	458, 1806
BseNI	ACTGG	5 cut(s)	66, 709, 1584, 1677, 1829
BseRI	GAGGAG	3 cut(s)	731, 1760, 1782
BseXI	GCAGC	4 cut(s)	235, 605, 959, 1198
BsgI	GTGCAG	2 cut(s)	719, 1811
Bsh1236I	CGCG	1 cut(s)	537
BshFI	GGCC	1 cut(s)	111
BshNI	GGYRCC	2 cut(s)	1193, 1772
BshTI	ACCGGT	1 cut(s)	1775
BsiHKAI	GWGCWC	1 cut(s)	488
BsiHKCI	CYCGRG	1 cut(s)	991
BsiSI	CCGG	4 cut(s)	154, 220, 650, 1776
BslI	CCNNNNNNNGG	3 cut(s)	844, 1683, 1782
BsmAI	GTCTC	3 cut(s)	12, 1263, 1744
BsmI	GAATGC	4 cut(s)	436, 586, 1691, 1705
BsnI	GGCC	1 cut(s)	111
BsoBI	CYCGRG	1 cut(s)	991
Bsp119I	TTCGAA	1 cut(s)	575
Bsp1286I	GDGCHC	1 cut(s)	488
Bsp143I	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
Bsp19I	CCATGG	2 cut(s)	838, 1405
BspACI	CCGC	8 cut(s)	237, 479, 513, 626, 746, 888, 1331, 1812
BspANI	GGCC	1 cut(s)	111
BspCNI	CTCAG	2 cut(s)	459, 1807
BspFNI	CGCG	1 cut(s)	537
BspLI	GGNNCC	3 cut(s)	1195, 1221, 1774
BspPI	GGATC	1 cut(s)	1590
BspQI	GCTCTTC	1 cut(s)	1986
BspT104I	TTCGAA	1 cut(s)	575
BspT107I	GGYRCC	2 cut(s)	1193, 1772
BsrDI	GCAATG	2 cut(s)	591, 957
BsrFI	RCCGGY	1 cut(s)	1775
BsrI	ACTGG	5 cut(s)	66, 709, 1584, 1677, 1829
BssAI	RCCGGY	1 cut(s)	1775
BssECI	CCNNGG	5 cut(s)	838, 1215, 1222, 1223, 1405
BssMI	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
BssNI	GRCGYC	1 cut(s)	123
BssT1I	CCWWGG	2 cut(s)	838, 1405
Bst2UI	CCWGG	2 cut(s)	1217, 1224
Bst4CI	ACNGT	4 cut(s)	95, 448, 667, 1446
Bst6I	CTCTTC	2 cut(s)	1445, 1986
BstACI	GRCGYC	1 cut(s)	123
BstBAI	YACGTR	1 cut(s)	1903
BstBI	TTCGAA	1 cut(s)	575
BstC8I	GCNNGC	2 cut(s)	289, 799
BstDEI	CTNAG	4 cut(s)	467, 507, 1815, 1975
BstDSI	CCRYGG	2 cut(s)	838, 1405
BstEII	GGTNACC	1 cut(s)	1010
BstF5I	GGATG	5 cut(s)	87, 352, 564, 867, 1979
BstFNI	CGCG	1 cut(s)	537
BstHHI	GCGC	1 cut(s)	537
BstKTI	GATC	8 cut(s)	200, 352, 466, 634, 990, 1585, 1624, 1783
BstMAI	GTCTC	3 cut(s)	12, 1263, 1744
BstMBI	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
BstMWI	GCNNNNNNNGC	5 cut(s)	288, 590, 1208, 1397, 1739
BstNI	CCWGG	2 cut(s)	1217, 1224
BstNSI	RCATGY	1 cut(s)	1596
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	3 cut(s)	218, 1215, 1222
BstUI	CGCG	1 cut(s)	537
BstV1I	GCAGC	4 cut(s)	235, 605, 959, 1198
BstV2I	GAAGAC	1 cut(s)	1883
BsuI	GTATCC	1 cut(s)	1666
BsuRI	GGCC	1 cut(s)	111
BtgI	CCRYGG	2 cut(s)	838, 1405
BtsCI	GGATG	5 cut(s)	87, 352, 564, 867, 1979
BtsIMutI	CAGTG	3 cut(s)	59, 1291, 1684
Cac8I	GCNNGC	2 cut(s)	289, 799
CaiI	CAGNNNCTG	3 cut(s)	10, 133, 343
CfoI	GCGC	1 cut(s)	537
Cfr10I	RCCGGY	1 cut(s)	1775
Cfr13I	GGNCC	2 cut(s)	1219, 1545
CseI	GACGC	1 cut(s)	131
Csp6I	GTAC	4 cut(s)	444, 502, 1303, 1773
CspAI	ACCGGT	1 cut(s)	1775
CviQI	GTAC	4 cut(s)	444, 502, 1303, 1773
DdeI	CTNAG	4 cut(s)	467, 507, 1815, 1975
DpnI	GATC	8 cut(s)	199, 351, 465, 633, 989, 1584, 1623, 1782
DpnII	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
DraI	TTTAAA	1 cut(s)	1345
Eam1104I	CTCTTC	2 cut(s)	1445, 1986
EarI	CTCTTC	2 cut(s)	1445, 1986
EciI	GGCGGA	1 cut(s)	761
Ecl136II	GAGCTC	1 cut(s)	486
Eco130I	CCWWGG	2 cut(s)	838, 1405
Eco24I	GRGCYC	1 cut(s)	488
Eco32I	GATATC	2 cut(s)	1091, 2007
Eco47I	GGWCC	2 cut(s)	1219, 1545
Eco53kI	GAGCTC	1 cut(s)	486
Eco57I	CTGAAG	1 cut(s)	2010
Eco88I	CYCGRG	1 cut(s)	991
Eco91I	GGTNACC	1 cut(s)	1010
EcoICRI	GAGCTC	1 cut(s)	486
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRI	GAATTC	1 cut(s)	1136
EcoRII	CCWGG	2 cut(s)	1215, 1222
EcoRV	GATATC	2 cut(s)	1091, 2007
EcoT14I	CCWWGG	2 cut(s)	838, 1405
EcoT22I	ATGCAT	2 cut(s)	1171, 1594
EcoT38I	GRGCYC	1 cut(s)	488
ErhI	CCWWGG	2 cut(s)	838, 1405
FauI	CCCGC	1 cut(s)	506
FbaI	TGATCA	1 cut(s)	1621
FblI	GTMKAC	1 cut(s)	162
Fnu4HI	GCNGC	6 cut(s)	224, 594, 889, 948, 1212, 1812
FokI	GGATG	5 cut(s)	74, 359, 571, 874, 1966
FriOI	GRGCYC	1 cut(s)	488
Fsp4HI	GCNGC	6 cut(s)	224, 594, 889, 948, 1212, 1812
FspBI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
GlaI	GCGC	1 cut(s)	536
GluI	GCNGC	6 cut(s)	224, 594, 889, 948, 1212, 1812
GsuI	CTGGAG	1 cut(s)	85
HaeIII	GGCC	1 cut(s)	111
HapII	CCGG	4 cut(s)	154, 220, 650, 1776
HgaI	GACGC	1 cut(s)	131
HhaI	GCGC	1 cut(s)	537
Hin1I	GRCGYC	1 cut(s)	123
Hin6I	GCGC	1 cut(s)	535
HinP1I	GCGC	1 cut(s)	535
HincII	GTYRAC	1 cut(s)	565
HindII	GTYRAC	1 cut(s)	565
HindIII	AAGCTT	1 cut(s)	1124
HinfI	GANTC	5 cut(s)	566, 1040, 1174, 1234, 2015
HpaII	CCGG	4 cut(s)	154, 220, 650, 1776
HphI	GGTGA	8 cut(s)	64, 460, 493, 1394, 1541, 1790, 1937, 1946
Hpy166II	GTNNAC	3 cut(s)	163, 444, 565
Hpy188I	TCNGA	5 cut(s)	12, 197, 354, 468, 2004
Hpy188III	TCNNGA	8 cut(s)	102, 119, 1086, 1163, 1249, 1696, 1757, 1873
Hpy8I	GTNNAC	3 cut(s)	163, 444, 565
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	5 cut(s)	290, 602, 1259, 1627, 1822
HpyCH4III	ACNGT	4 cut(s)	95, 448, 667, 1446
HpyCH4IV	ACGT	3 cut(s)	33, 159, 1902
HpyF10VI	GCNNNNNNNGC	5 cut(s)	288, 590, 1208, 1397, 1739
HpyF3I	CTNAG	4 cut(s)	467, 507, 1815, 1975
HpySE526I	ACGT	3 cut(s)	33, 159, 1902
Hsp92I	GRCGYC	1 cut(s)	123
HspAI	GCGC	1 cut(s)	535
KpnI	GGTACC	1 cut(s)	1776
Ksp22I	TGATCA	1 cut(s)	1621
Kzo9I	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
LguI	GCTCTTC	1 cut(s)	1986
Lsp1109I	GCAGC	4 cut(s)	235, 605, 959, 1198
LweI	GCATC	3 cut(s)	1156, 1459, 1988
MaeI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
MaeII	ACGT	3 cut(s)	33, 159, 1902
MaeIII	GTNAC	9 cut(s)	95, 256, 299, 370, 1010, 1029, 1474, 1505, 1943
MalI	GATC	8 cut(s)	199, 351, 465, 633, 989, 1584, 1623, 1782
MboI	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
MboII	GAAGA	9 cut(s)	589, 761, 865, 1426, 1462, 1861, 1864, 1888, 2003
MhlI	GDGCHC	1 cut(s)	488
MlyI	GAGTC	1 cut(s)	560
MmeI	TCCRAC	1 cut(s)	102
Mph1103I	ATGCAT	2 cut(s)	1171, 1594
MroXI	GAANNNNTTC	2 cut(s)	134, 1280
MseI	TTAA	6 cut(s)	56, 390, 491, 657, 1122, 1344
MslI	CAYNNNNRTG	2 cut(s)	1184, 1410
MspA1I	CMGCKG	1 cut(s)	1814
MspI	CCGG	4 cut(s)	154, 220, 650, 1776
MspR9I	CCNGG	3 cut(s)	220, 1217, 1224
Mva1269I	GAATGC	4 cut(s)	436, 586, 1691, 1705
MvaI	CCWGG	2 cut(s)	1217, 1224
MvnI	CGCG	1 cut(s)	537
MwoI	GCNNNNNNNGC	5 cut(s)	288, 590, 1208, 1397, 1739
NciI	CCSGG	1 cut(s)	220
NcoI	CCATGG	2 cut(s)	838, 1405
NdeII	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
NlaIV	GGNNCC	3 cut(s)	1195, 1221, 1774
NmuCI	GTSAC	4 cut(s)	256, 1474, 1505, 1943
NsiI	ATGCAT	2 cut(s)	1171, 1594
NspI	RCATGY	1 cut(s)	1596
NspV	TTCGAA	1 cut(s)	575
PasI	CCCWGGG	1 cut(s)	1223
PciSI	GCTCTTC	1 cut(s)	1986
PctI	GAATGC	4 cut(s)	436, 586, 1691, 1705
PdmI	GAANNNNTTC	2 cut(s)	134, 1280
PfeI	GAWTC	4 cut(s)	1040, 1174, 1234, 2015
PflMI	CCANNNNNTGG	1 cut(s)	1683
PinAI	ACCGGT	1 cut(s)	1775
PkrI	GCNGC	6 cut(s)	225, 595, 890, 949, 1213, 1813
PleI	GAGTC	1 cut(s)	560
PpsI	GAGTC	1 cut(s)	560
Ppu21I	YACGTR	1 cut(s)	1903
PsiI	TTATAA	2 cut(s)	881, 1563
Psp124BI	GAGCTC	1 cut(s)	488
Psp6I	CCWGG	2 cut(s)	1215, 1222
PspEI	GGTNACC	1 cut(s)	1010
PspGI	CCWGG	2 cut(s)	1215, 1222
PspN4I	GGNNCC	3 cut(s)	1195, 1221, 1774
PspPI	GGNCC	2 cut(s)	1219, 1545
PstNI	CAGNNNCTG	3 cut(s)	10, 133, 343
RsaI	GTAC	4 cut(s)	445, 503, 1304, 1774
RsaNI	GTAC	4 cut(s)	444, 502, 1303, 1773
RseI	CAYNNNNRTG	2 cut(s)	1184, 1410
SacI	GAGCTC	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	1986
SaqAI	TTAA	6 cut(s)	56, 390, 491, 657, 1122, 1344
SatI	GCNGC	6 cut(s)	224, 594, 889, 948, 1212, 1812
Sau3AI	GATC	8 cut(s)	197, 349, 463, 631, 987, 1582, 1621, 1780
Sau96I	GGNCC	2 cut(s)	1219, 1545
SchI	GAGTC	1 cut(s)	560
ScrFI	CCNGG	3 cut(s)	220, 1217, 1224
SduI	GDGCHC	1 cut(s)	488
SfaNI	GCATC	3 cut(s)	1156, 1459, 1988
SfuI	TTCGAA	1 cut(s)	575
SinI	GGWCC	2 cut(s)	1219, 1545
SmiMI	CAYNNNNRTG	2 cut(s)	1184, 1410
SmlI	CTYRAG	4 cut(s)	394, 1005, 1249, 1628
SmoI	CTYRAG	4 cut(s)	394, 1005, 1249, 1628
SsiI	CCGC	8 cut(s)	237, 479, 513, 626, 746, 888, 1331, 1812
SspI	AATATT	1 cut(s)	1321
SspMI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
SstI	GAGCTC	1 cut(s)	488
StyD4I	CCNGG	3 cut(s)	218, 1215, 1222
StyI	CCWWGG	2 cut(s)	838, 1405
TaaI	ACNGT	4 cut(s)	95, 448, 667, 1446
TaiI	ACGT	3 cut(s)	36, 162, 1905
TaqI	TCGA	4 cut(s)	138, 231, 575, 760
TatI	WGTACW	2 cut(s)	501, 1302
TauI	GCSGC	2 cut(s)	891, 1814
TfiI	GAWTC	4 cut(s)	1040, 1174, 1234, 2015
Tru1I	TTAA	6 cut(s)	56, 390, 491, 657, 1122, 1344
Tru9I	TTAA	6 cut(s)	56, 390, 491, 657, 1122, 1344
TscAI	CASTG	3 cut(s)	66, 1291, 1684
TseFI	GTSAC	4 cut(s)	256, 1474, 1505, 1943
TseI	GCWGC	4 cut(s)	223, 593, 947, 1211
Tsp45I	GTSAC	4 cut(s)	256, 1474, 1505, 1943
TspDTI	ATGAA	6 cut(s)	932, 972, 1032, 1226, 1871, 1907
TspGWI	ACGGA	2 cut(s)	864, 1649
TspRI	CASTG	3 cut(s)	66, 1291, 1684
Van91I	CCANNNNNTGG	1 cut(s)	1683
VpaK11BI	GGWCC	2 cut(s)	1219, 1545
XapI	RAATTY	3 cut(s)	727, 964, 1136
XbaI	TCTAGA	1 cut(s)	1756
XceI	RCATGY	1 cut(s)	1596
XcmI	CCANNNNNNNNNTGG	1 cut(s)	409
XmiI	GTMKAC	1 cut(s)	162
XmnI	GAANNNNTTC	2 cut(s)	134, 1280
XspI	CTAG	5 cut(s)	783, 824, 1016, 1734, 1757
Zsp2I	ATGCAT	2 cut(s)	1171, 1594

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.