MD10G1134600.v1.1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
Physical Location & Seq
Reverse (-)
21664825 .. 21669192
4368 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1134600.v1.1.491

Sequence Viewer

Length: 1512 bp
ATGGGTTGCTGTGAATCCAAAGTTTCAGAGAAACAACCACCAGAGAAAATTCAAACCCAGCAACTAGCTCACAACAGCAGGAACCCGACCCACCACCCGAATCCCACCTCAGGATCCGACCCGGAAACCGGCGGAGCCCCACCCTTCTCCGAATTCTCCTTCGCCGACCTCAAAGCCGCCACCAACAACTTCAGCTCTGACTACATAGTCTCTGAGAGCGGCGAGAAGGCCCCAAATCTTGTTTACAAGGGTCGGCTGCAGAACCGCCGTTGGATCGCCGTCAAGAAGTTCACCAAGATGGCGTGGCCTGATCCCAAGCAGTTTGCGGAGGAAGCTTGGGGTGTTGGGAAGCTGCGGCATCGGCGGCTTGCGAATTTGATTGGGTATTGCTGTGATGGGGATGAGAGGCTGCTAGTTGCCGAGTACATGCCTACTGATACTTTAGCTAAGCATTTGTTCCACTGGGAGAATCAAACCATTGAGTGGGCCATGCGTTTAAGAGTGGCTCTTTATATTGCTGAAGCTTTAGATTATTGTAGTACTGAGGGCCGTCCGTTATACCACGATTTGAATGCTTATAGGGTTCTCTTTGACGAGGATGGTGATCCTCGCCTTTCATGTTTTGGCTTGATGAGAAATAGTAGGGATGGGAAGAGTTACAGCACAAATCTCGCTTACACGCCGCCTGAATATTTAAGAAATGGAAGAGTCACTCCAGAAAGTGTTGTTTATAGCTTTGGCACTGTCCTTCTAGATCTGCTAAGTGGGAAGCACATCCCTCCAAGTCATGCTCTTGATATGATACGAGGGAAAAATATCATTCTGTTAATGGATTCACATTTGGAGGGGAAATTTTCTACAGAGGAAGCAACAGTAGTTGTTAATCTTGCTTCTCAATGTCTCCAATATGAACCTAGAGAGCGGCCTAATACGAAGGACCTTGTTGCAACACTTTCTCCACTGCAGACCAAACCTGATGTTCCATCTTATGTGATGCTTGGGATTCCAAAGCATGAGGAAGCCCCTTCAACCCCACAACGTCCCCTATCTGCTATGGGTGACGCCTGCTCTCGGATGGACCTCACAGCAATCCATCAGATCTTGGTTATGACGCACTACAGAGATGATGAAGGAACCAATGAGTTATCTTTCCAAGAGTGGACTCAACAGATGAGAGACATGTTGGAGGCAAGGAAGCGAGGGGATTATGCATTCCGGGACAAAGATTTTAAAGCTGCCATTGACTGTTACTCCCAGTTCATAGATGTTGGAACTATGGTGTCGCCAACCGTTTTTGCGCGACGCAGTTTATGCTACCTGTTAAATGAGCAACCAGATGCTGCCCTACGAGATGCAATGCAAGCGCAATGTGTTTATCCAGACTGGCCCACGGCCTTCTACATGCAATCAGTTGCTCTAGCCAAGCTAGACATGCACAAGGACGCTGCTGACATGTTAAACGAAGCAACTGCGCTAGAAGAAAAGAGGCAACGAGGAGGCCGGGGATCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

504

Amino Acids

56.9

Weight (kDa)

5.91

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 81 - 318 5.1e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 81 - 316 3.8e-23 Protein kinase domain
TPR_BSK1_C PF25575 354 - 470 5.3e-61 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 206
AccB7I CCANNNNNTGG 1 cut(s) 483
AccBSI CCGCTC 2 cut(s) 219, 922
AccII CGCG 1 cut(s) 1300
AciI CCGC 9 cut(s) 132, 177, 219, 265, 326, 355, 364, 683, 922
AclWI GGATC 5 cut(s) 108, 121, 281, 305, 599
AcsI RAATTY 4 cut(s) 48, 152, 373, 851
AcuI CTGAAG 2 cut(s) 175, 540
AcyI GRCGYC 1 cut(s) 1062
AfaI GTAC 2 cut(s) 425, 541
AfiI CCNNNNNNNGG 4 cut(s) 110, 128, 483, 1071
AflIII ACRYGT 2 cut(s) 1179, 1452
AgsI TTSAA 3 cut(s) 53, 571, 1029
AluBI AGCT 9 cut(s) 68, 195, 335, 352, 446, 524, 735, 1235, 1426
AluI AGCT 9 cut(s) 68, 195, 335, 352, 446, 524, 735, 1235, 1426
Alw26I GTCTC 3 cut(s) 214, 905, 1170
AlwI GGATC 5 cut(s) 108, 121, 281, 305, 599
AlwNI CAGNNNCTG 1 cut(s) 1340
AoxI GGCC 8 cut(s) 228, 305, 486, 547, 923, 1385, 1392, 1498
ApeKI GCWGC 6 cut(s) 256, 352, 409, 1235, 1340, 1445
ApoI RAATTY 4 cut(s) 48, 152, 373, 851
AspLEI GCGC 3 cut(s) 1300, 1366, 1474
AspS9I GGNCC 6 cut(s) 229, 486, 547, 937, 1078, 1386
AsuC2I CCSGG 3 cut(s) 122, 1217, 1502
AsuHPI GGTGA 3 cut(s) 283, 614, 1070
AvaII GGWCC 2 cut(s) 937, 1078
AxyI CCTNAGG 1 cut(s) 109
BamHI GGATCC 1 cut(s) 113
BanII GRGCYC 1 cut(s) 139
BbvI GCAGC 6 cut(s) 243, 339, 396, 1222, 1327, 1432
BccI CCATC 7 cut(s) 292, 389, 593, 641, 991, 1069, 1101
BceAI ACGGC 4 cut(s) 252, 263, 534, 1407
BcgI CGANNNNNNTGC 6 cut(s) 554, 588, 652, 686, 1451, 1485
BcnI CCSGG 3 cut(s) 122, 1217, 1502
BcoDI GTCTC 3 cut(s) 214, 905, 1170
BfaI CTAG 7 cut(s) 65, 413, 752, 915, 1418, 1427, 1475
BfmI CTRYAG 4 cut(s) 257, 858, 962, 1117
BglII AGATCT 2 cut(s) 754, 1098
BlpI GCTNAGC 1 cut(s) 447
BmcAI AGTACT 1 cut(s) 541
Bme1390I CCNGG 3 cut(s) 122, 1217, 1502
Bme18I GGWCC 2 cut(s) 937, 1078
BmgT120I GGNCC 6 cut(s) 229, 486, 547, 937, 1078, 1386
BmiI GGNNCC 5 cut(s) 83, 115, 136, 231, 1135
BmrFI CCNGG 3 cut(s) 122, 1217, 1502
BmrI ACTGGG 2 cut(s) 472, 1249
BmsI GCATC 4 cut(s) 367, 984, 1327, 1342
BmuI ACTGGG 2 cut(s) 472, 1249
BpmI CTGGAG 1 cut(s) 699
Bpu1102I GCTNAGC 1 cut(s) 447
BpuMI CCSGG 3 cut(s) 122, 1217, 1502
BsaBI GATNNNNATC 1 cut(s) 603
BsaHI GRCGYC 1 cut(s) 1062
BsaJI CCNNGG 2 cut(s) 1389, 1501
BsaXI ACNNNNNCTCC 4 cut(s) 940, 970, 1235, 1265
Bsc4I CCNNNNNNNGG 4 cut(s) 110, 128, 483, 1071
Bse118I RCCGGY 1 cut(s) 128
Bse1I ACTGG 3 cut(s) 467, 1255, 1388
Bse21I CCTNAGG 1 cut(s) 109
Bse3DI GCAATG 2 cut(s) 1362, 1373
Bse8I GATNNNNATC 1 cut(s) 603
BseDI CCNNGG 2 cut(s) 1389, 1501
BseGI GGATG 5 cut(s) 406, 604, 652, 774, 1080
BseJI GATNNNNATC 1 cut(s) 603
BseLI CCNNNNNNNGG 4 cut(s) 110, 128, 483, 1071
BseMI GCAATG 2 cut(s) 1362, 1373
BseMII CTCAG 3 cut(s) 123, 204, 534
BseNI ACTGG 3 cut(s) 467, 1255, 1388
BseRI GAGGAG 1 cut(s) 1509
BseXI GCAGC 6 cut(s) 243, 339, 396, 1222, 1327, 1432
BseYI CCCAGC 1 cut(s) 57
Bsh1236I CGCG 1 cut(s) 1300
BshFI GGCC 8 cut(s) 230, 307, 488, 549, 925, 1387, 1394, 1500
BsiSI CCGG 4 cut(s) 122, 129, 1216, 1501
BslFI GGGAC 2 cut(s) 1026, 1232
BslI CCNNNNNNNGG 4 cut(s) 110, 128, 483, 1071
BsmAI GTCTC 3 cut(s) 214, 905, 1170
BsmFI GGGAC 2 cut(s) 1026, 1232
BsmI GAATGC 2 cut(s) 577, 1211
BsnI GGCC 8 cut(s) 230, 307, 488, 549, 925, 1387, 1394, 1500
Bsp1286I GDGCHC 1 cut(s) 139
Bsp143I GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
Bsp1720I GCTNAGC 1 cut(s) 447
BspACI CCGC 9 cut(s) 132, 177, 219, 265, 326, 355, 364, 683, 922
BspANI GGCC 8 cut(s) 230, 307, 488, 549, 925, 1387, 1394, 1500
BspCNI CTCAG 3 cut(s) 122, 205, 535
BspFNI CGCG 1 cut(s) 1300
BspLI GGNNCC 5 cut(s) 83, 115, 136, 231, 1135
BspMAI CTGCAG 2 cut(s) 261, 966
BspPI GGATC 5 cut(s) 108, 121, 281, 305, 599
BsrBI CCGCTC 2 cut(s) 219, 922
BsrDI GCAATG 2 cut(s) 1362, 1373
BsrFI RCCGGY 1 cut(s) 128
BsrI ACTGG 3 cut(s) 467, 1255, 1388
BssAI RCCGGY 1 cut(s) 128
BssECI CCNNGG 2 cut(s) 1389, 1501
BssMI GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
BssNI GRCGYC 1 cut(s) 1062
Bst4CI ACNGT 4 cut(s) 745, 874, 1247, 1291
Bst6I CTCTTC 2 cut(s) 647, 700
BstACI GRCGYC 1 cut(s) 1062
BstAPI GCANNNNNTGC 1 cut(s) 1311
BstC8I GCNNGC 3 cut(s) 369, 1066, 1362
BstDEI CTNAG 5 cut(s) 109, 213, 447, 543, 761
BstDSI CCRYGG 1 cut(s) 1389
BstF5I GGATG 5 cut(s) 406, 604, 652, 774, 1080
BstFNI CGCG 1 cut(s) 1300
BstHHI GCGC 3 cut(s) 1300, 1366, 1474
BstKTI GATC 7 cut(s) 116, 276, 313, 607, 757, 1101, 1508
BstMAI GTCTC 3 cut(s) 214, 905, 1170
BstMBI GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
BstMWI GCNNNNNNNGC 6 cut(s) 332, 361, 364, 1311, 1361, 1432
BstNSI RCATGY 5 cut(s) 430, 1183, 1405, 1435, 1456
BstSCI CCNGG 3 cut(s) 120, 1215, 1500
BstSFI CTRYAG 4 cut(s) 257, 858, 962, 1117
BstUI CGCG 1 cut(s) 1300
BstV1I GCAGC 6 cut(s) 243, 339, 396, 1222, 1327, 1432
BstX2I RGATCY 3 cut(s) 113, 754, 1098
BstYI RGATCY 3 cut(s) 113, 754, 1098
Bsu36I CCTNAGG 1 cut(s) 109
BsuRI GGCC 8 cut(s) 230, 307, 488, 549, 925, 1387, 1394, 1500
BtgI CCRYGG 1 cut(s) 1389
BtsCI GGATG 5 cut(s) 406, 604, 652, 774, 1080
BtsI GCAGTG 1 cut(s) 959
BtsIMutI CAGTG 3 cut(s) 460, 741, 959
Cac8I GCNNGC 3 cut(s) 369, 1066, 1362
CaiI CAGNNNCTG 1 cut(s) 1340
CfoI GCGC 3 cut(s) 1300, 1366, 1474
Cfr10I RCCGGY 1 cut(s) 128
Cfr13I GGNCC 6 cut(s) 229, 486, 547, 937, 1078, 1386
CseI GACGC 4 cut(s) 1070, 1120, 1311, 1451
Csp6I GTAC 2 cut(s) 424, 540
CviAII CATG 9 cut(s) 427, 490, 618, 788, 1013, 1180, 1402, 1432, 1453
CviQI GTAC 2 cut(s) 424, 540
DdeI CTNAG 5 cut(s) 109, 213, 447, 543, 761
DpnI GATC 7 cut(s) 115, 275, 312, 606, 756, 1100, 1507
DpnII GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
DraI TTTAAA 1 cut(s) 1231
DrdI GACNNNNNNGTC 1 cut(s) 206
DseDI GACNNNNNNGTC 1 cut(s) 206
Eam1104I CTCTTC 2 cut(s) 647, 700
EarI CTCTTC 2 cut(s) 647, 700
EciI GGCGGA 1 cut(s) 147
Eco24I GRGCYC 1 cut(s) 139
Eco47I GGWCC 2 cut(s) 937, 1078
Eco57I CTGAAG 2 cut(s) 175, 540
Eco81I CCTNAGG 1 cut(s) 109
EcoO109I RGGNCCY 2 cut(s) 229, 937
EcoRI GAATTC 1 cut(s) 152
EcoT22I ATGCAT 1 cut(s) 1213
EcoT38I GRGCYC 1 cut(s) 139
FaeI CATG 9 cut(s) 430, 493, 621, 791, 1016, 1183, 1405, 1435, 1456
FaqI GGGAC 2 cut(s) 1026, 1232
FatI CATG 9 cut(s) 426, 489, 617, 787, 1012, 1179, 1401, 1431, 1452
FokI GGATG 5 cut(s) 413, 611, 659, 761, 1087
FriOI GRGCYC 1 cut(s) 139
FspBI CTAG 7 cut(s) 65, 413, 752, 915, 1418, 1427, 1475
GlaI GCGC 3 cut(s) 1299, 1365, 1473
GsaI CCCAGC 1 cut(s) 61
GsuI CTGGAG 1 cut(s) 699
HaeIII GGCC 8 cut(s) 230, 307, 488, 549, 925, 1387, 1394, 1500
HapII CCGG 4 cut(s) 122, 129, 1216, 1501
HgaI GACGC 4 cut(s) 1070, 1120, 1311, 1451
HhaI GCGC 3 cut(s) 1300, 1366, 1474
Hin1I GRCGYC 1 cut(s) 1062
Hin1II CATG 9 cut(s) 430, 493, 621, 791, 1016, 1183, 1405, 1435, 1456
Hin6I GCGC 3 cut(s) 1298, 1364, 1472
HinP1I GCGC 3 cut(s) 1298, 1364, 1472
HindIII AAGCTT 2 cut(s) 333, 522
HinfI GANTC 7 cut(s) 14, 100, 469, 708, 833, 1003, 1162
HpaII CCGG 4 cut(s) 122, 129, 1216, 1501
HphI GGTGA 3 cut(s) 283, 614, 1070
Hpy166II GTNNAC 3 cut(s) 244, 291, 1161
Hpy188I TCNGA 7 cut(s) 28, 118, 151, 199, 214, 1074, 1098
Hpy188III TCNNGA 7 cut(s) 111, 283, 716, 752, 794, 1379, 1509
Hpy8I GTNNAC 3 cut(s) 244, 291, 1161
Hpy99I CGWCG 1 cut(s) 1305
HpyAV CCTTC 8 cut(s) 154, 169, 220, 758, 928, 1035, 1124, 1405
HpyCH4III ACNGT 4 cut(s) 745, 874, 1247, 1291
HpyCH4IV ACGT 1 cut(s) 1039
HpyCH4V TGCA 8 cut(s) 259, 947, 964, 1211, 1355, 1360, 1405, 1435
HpyF10VI GCNNNNNNNGC 6 cut(s) 332, 361, 364, 1311, 1361, 1432
HpyF3I CTNAG 5 cut(s) 109, 213, 447, 543, 761
HpySE526I ACGT 1 cut(s) 1039
Hsp92I GRCGYC 1 cut(s) 1062
Hsp92II CATG 9 cut(s) 430, 493, 621, 791, 1016, 1183, 1405, 1435, 1456
HspAI GCGC 3 cut(s) 1298, 1364, 1472
Kzo9I GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
LmnI GCTCC 1 cut(s) 134
Lsp1109I GCAGC 6 cut(s) 243, 339, 396, 1222, 1327, 1432
LweI GCATC 4 cut(s) 367, 984, 1327, 1342
MaeI CTAG 7 cut(s) 65, 413, 752, 915, 1418, 1427, 1475
MaeII ACGT 1 cut(s) 1039
MaeIII GTNAC 4 cut(s) 656, 709, 1058, 1247
MalI GATC 7 cut(s) 115, 275, 312, 606, 756, 1100, 1507
MbiI CCGCTC 2 cut(s) 219, 922
MboI GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
MboII GAAGA 3 cut(s) 664, 717, 1490
MflI RGATCY 3 cut(s) 113, 754, 1098
MhlI GDGCHC 1 cut(s) 139
MluCI AATT 4 cut(s) 48, 152, 373, 851
MlyI GAGTC 2 cut(s) 717, 1156
MmeI TCCRAC 4 cut(s) 141, 251, 1164, 1249
Mph1103I ATGCAT 1 cut(s) 1213
MseI TTAA 7 cut(s) 497, 695, 827, 882, 1230, 1322, 1457
MslI CAYNNNNRTG 1 cut(s) 296
MspI CCGG 4 cut(s) 122, 129, 1216, 1501
MspR9I CCNGG 3 cut(s) 122, 1217, 1502
Mva1269I GAATGC 2 cut(s) 577, 1211
MvnI CGCG 1 cut(s) 1300
MwoI GCNNNNNNNGC 6 cut(s) 332, 361, 364, 1311, 1361, 1432
NciI CCSGG 3 cut(s) 122, 1217, 1502
NdeII GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
NlaIII CATG 9 cut(s) 430, 493, 621, 791, 1016, 1183, 1405, 1435, 1456
NlaIV GGNNCC 5 cut(s) 83, 115, 136, 231, 1135
NmeAIII GCCGAG 1 cut(s) 445
NmuCI GTSAC 2 cut(s) 709, 1058
NsiI ATGCAT 1 cut(s) 1213
NspI RCATGY 5 cut(s) 430, 1183, 1405, 1435, 1456
PciI ACATGT 2 cut(s) 1179, 1452
PctI GAATGC 2 cut(s) 577, 1211
PfeI GAWTC 5 cut(s) 14, 100, 469, 833, 1003
PflMI CCANNNNNTGG 1 cut(s) 483
PfoI TCCNGGA 1 cut(s) 1215
PleI GAGTC 2 cut(s) 716, 1156
PpsI GAGTC 2 cut(s) 716, 1156
PpuMI RGGWCCY 1 cut(s) 937
PscI ACATGT 2 cut(s) 1179, 1452
Psp5II RGGWCCY 1 cut(s) 937
PspFI CCCAGC 1 cut(s) 57
PspN4I GGNNCC 5 cut(s) 83, 115, 136, 231, 1135
PspPI GGNCC 6 cut(s) 229, 486, 547, 937, 1078, 1386
PspPPI RGGWCCY 1 cut(s) 937
PstI CTGCAG 2 cut(s) 261, 966
PstNI CAGNNNCTG 1 cut(s) 1340
PsuI RGATCY 3 cut(s) 113, 754, 1098
RsaI GTAC 2 cut(s) 425, 541
RsaNI GTAC 2 cut(s) 424, 540
RseI CAYNNNNRTG 1 cut(s) 296
SaqAI TTAA 7 cut(s) 497, 695, 827, 882, 1230, 1322, 1457
Sau3AI GATC 7 cut(s) 113, 273, 310, 604, 754, 1098, 1505
Sau96I GGNCC 6 cut(s) 229, 486, 547, 937, 1078, 1386
ScaI AGTACT 1 cut(s) 541
SchI GAGTC 2 cut(s) 717, 1156
ScrFI CCNGG 3 cut(s) 122, 1217, 1502
SduI GDGCHC 1 cut(s) 139
SfaNI GCATC 4 cut(s) 367, 984, 1327, 1342
SfcI CTRYAG 4 cut(s) 257, 858, 962, 1117
SinI GGWCC 2 cut(s) 937, 1078
SmiMI CAYNNNNRTG 1 cut(s) 296
Sse9I AATT 4 cut(s) 48, 152, 373, 851
SsiI CCGC 9 cut(s) 132, 177, 219, 265, 326, 355, 364, 683, 922
SspI AATATT 1 cut(s) 692
SspMI CTAG 7 cut(s) 65, 413, 752, 915, 1418, 1427, 1475
StyD4I CCNGG 3 cut(s) 120, 1215, 1500
TaaI ACNGT 4 cut(s) 745, 874, 1247, 1291
TaiI ACGT 1 cut(s) 1042
TasI AATT 4 cut(s) 48, 152, 373, 851
TatI WGTACW 2 cut(s) 423, 539
TauI GCSGC 6 cut(s) 179, 222, 358, 367, 685, 925
TfiI GAWTC 5 cut(s) 14, 100, 469, 833, 1003
Tru1I TTAA 7 cut(s) 497, 695, 827, 882, 1230, 1322, 1457
Tru9I TTAA 7 cut(s) 497, 695, 827, 882, 1230, 1322, 1457
TscAI CASTG 3 cut(s) 467, 748, 966
TseFI GTSAC 2 cut(s) 709, 1058
TseI GCWGC 6 cut(s) 256, 352, 409, 1235, 1340, 1445
Tsp45I GTSAC 2 cut(s) 709, 1058
TspDTI ATGAA 4 cut(s) 606, 924, 1143, 1249
TspGWI ACGGA 1 cut(s) 543
TspRI CASTG 3 cut(s) 467, 748, 966
Van91I CCANNNNNTGG 1 cut(s) 483
VpaK11BI GGWCC 2 cut(s) 937, 1078
XapI RAATTY 4 cut(s) 48, 152, 373, 851
XbaI TCTAGA 1 cut(s) 751
XceI RCATGY 5 cut(s) 430, 1183, 1405, 1435, 1456
XspI CTAG 7 cut(s) 65, 413, 752, 915, 1418, 1427, 1475
ZrmI AGTACT 1 cut(s) 541
Zsp2I ATGCAT 1 cut(s) 1213
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.