Rmu_sc0004617.1_g000013

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004617.1
Physical Location & Seq
Forward (+)
34688 .. 39315
4628 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004617.1_g000013.1.cds

Sequence Viewer

Length: 1518 bp
atgggttgctgtgattccaagttccttaccgccgagactcacccagagaaagtctcgacccaccaacaagcccacaacgccgcccgggcccagacccagcacccgactgtccccgccggatccgaccccgaaaccggcggcgccccgccgttctcggaattctccttcaacgacctcaaaaccgccaccaacaacttcagctccgactacatagtatccgagagtggcgagaaagcccccaacgttgtctacaagggccgcctcaacaaccgccgttggatcgccgtcaagaagttcaccaagctggcgtggcccgatcccaagcagtttgcggaggaagcttggggtgtggggaagctgaggcataggaggcttgcaaatctaattgggtattgctgtgatggtgatgagaggctgcttgttgctgagtacatgcctactgatactttagccaagcatttgtttcactgggagaatcaaaccattgaatgggccatgcgtttaagagtagctcttcatattgctgaagctttagattattgtagtactgagggccgtccattataccatgatttgaatgcttatagggttctctttgatgaggatggtgatccacgtctttcatgttttggcttgatgagaaatagtagggatgggaagagttatagcacaaatctggcctatacaccaccagagtacttaagaaatggaagggtcactccagaaagtgttatctacagttttggaactgtccttctagacttgctaagtggaaagcacatccctccaagtcatgctcttgatatgatacggggtaagaatatcattctcttgatggattcacatttggagggaaatttttctactgaggaagcgacagtggttgtcaatcttgcctctcaatgtttgcagtatgagcccagagagcggcctaatagaaaggaccttgttgcgacacttgctccactgcagaccaaacctgatgttccatcttatgtcatgcttggaattccgaagcatgaggaagccccaccaaccccacaacggcccctttcagcaatgggtgaggcctgctctcgaatggacctcacagcgatccatcagatcttggttatgacgcactacagagatgacgaaggaaccaatgagttatccttccaagagtggactcaacagatgagagacatgttggaagcaaggaagcgaggggactatgcgtttcgtgacaaagattttaaagctgccattgactgctactcccagttcatagatgttggaactatggtgtcccccactgtttttgcacgacgcagtttatgctatctgttaaacgagcaaccagatgctgcccttcgagatgcaatgcaagctcaatgtgtctatccagagtggccgacggccttctacatgcagtcagttgctcttgccaagctggacatgcacaaggacgctggtgacatgttaaatgaagcaactacactggaagaaaagaggcaaagaggtggcaggggatcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

505

Amino Acids

57.08

Weight (kDa)

5.92

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 140
AccB7I CCANNNNNTGG 1 cut(s) 489
AccBSI CCGCTC 1 cut(s) 928
AccI GTMKAC 1 cut(s) 249
AclI AACGTT 1 cut(s) 243
AclWI GGATC 6 cut(s) 114, 127, 287, 311, 605, 1090
AcoI YGGCCR 1 cut(s) 1391
AcsI RAATTY 3 cut(s) 158, 856, 1008
AcuI CTGAAG 2 cut(s) 181, 546
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 3 cut(s) 431, 547, 698
AfiI CCNNNNNNNGG 4 cut(s) 134, 489, 927, 1044
AflII CTTAAG 1 cut(s) 700
AflIII ACRYGT 2 cut(s) 1185, 1458
AgsI TTSAA 3 cut(s) 169, 488, 577
AjiI CACGTC 1 cut(s) 617
AluBI AGCT 9 cut(s) 201, 304, 341, 358, 512, 530, 1241, 1370, 1432
AluI AGCT 9 cut(s) 201, 304, 341, 358, 512, 530, 1241, 1370, 1432
Alw26I GTCTC 3 cut(s) 29, 58, 1176
AlwI GGATC 6 cut(s) 114, 127, 287, 311, 605, 1090
AlwNI CAGNNNCTG 1 cut(s) 1346
Ama87I CYCGRG 1 cut(s) 84
ApaI GGGCCC 1 cut(s) 91
ApeKI GCWGC 3 cut(s) 415, 1241, 1346
ApoI RAATTY 3 cut(s) 158, 856, 1008
Asp700I GAANNNNTTC 1 cut(s) 859
AspLEI GCGC 1 cut(s) 143
AspS9I GGNCC 9 cut(s) 87, 88, 256, 312, 492, 553, 943, 1047, 1084
AsuC2I CCSGG 2 cut(s) 85, 86
AsuHPI GGTGA 6 cut(s) 32, 289, 416, 620, 1076, 1466
AvaI CYCGRG 1 cut(s) 84
AvaII GGWCC 2 cut(s) 943, 1084
BaeGI GKGCMC 1 cut(s) 91
BamHI GGATCC 1 cut(s) 119
BanI GGYRCC 1 cut(s) 140
BanII GRGCYC 2 cut(s) 91, 921
BbvCI CCTCAGC 1 cut(s) 359
BbvI GCAGC 3 cut(s) 402, 1228, 1333
BccI CCATC 6 cut(s) 395, 599, 647, 829, 997, 1107
BceAI ACGGC 6 cut(s) 133, 258, 269, 540, 1061, 1413
BciVI GTATCC 1 cut(s) 226
BcnI CCSGG 2 cut(s) 85, 86
BcoDI GTCTC 3 cut(s) 29, 58, 1176
BfaI CTAG 1 cut(s) 758
BfmI CTRYAG 3 cut(s) 736, 968, 1123
BfoI RGCGCY 1 cut(s) 144
BfrI CTTAAG 1 cut(s) 700
BfuI GTATCC 1 cut(s) 226
BglI GCCNNNNNGGC 1 cut(s) 86
BglII AGATCT 1 cut(s) 1104
BisI GCNGC 7 cut(s) 81, 139, 259, 416, 929, 1242, 1347
BlsI GCNGC 7 cut(s) 82, 140, 260, 417, 930, 1243, 1348
BmcAI AGTACT 2 cut(s) 547, 698
Bme1390I CCNGG 2 cut(s) 85, 86
Bme18I GGWCC 2 cut(s) 943, 1084
BmeT110I CYCGRG 1 cut(s) 84
BmgBI CACGTC 1 cut(s) 617
BmgT120I GGNCC 9 cut(s) 87, 88, 256, 312, 492, 553, 943, 1047, 1084
BmiI GGNNCC 5 cut(s) 89, 121, 142, 1049, 1141
BmrFI CCNGG 2 cut(s) 85, 86
BmrI ACTGGG 2 cut(s) 478, 1255
BmsI GCATC 2 cut(s) 1333, 1348
BmuI ACTGGG 2 cut(s) 478, 1255
BplI GAGNNNNNCTC 4 cut(s) 38, 70, 1058, 1090
BpmI CTGGAG 1 cut(s) 705
Bpu10I CCTNAGC 1 cut(s) 359
BpuMI CCSGG 2 cut(s) 85, 86
BsaBI GATNNNNATC 1 cut(s) 609
BsaHI GRCGYC 1 cut(s) 141
BsaJI CCNNGG 1 cut(s) 84
BsaXI ACNNNNNCTCC 6 cut(s) 185, 215, 946, 976, 1241, 1271
Bsc4I CCNNNNNNNGG 4 cut(s) 134, 489, 927, 1044
Bse118I RCCGGY 1 cut(s) 134
Bse1I ACTGG 3 cut(s) 473, 1261, 1485
Bse3DI GCAATG 2 cut(s) 1065, 1368
Bse8I GATNNNNATC 1 cut(s) 609
BseDI CCNNGG 1 cut(s) 84
BseGI GGATG 3 cut(s) 610, 658, 780
BseJI GATNNNNATC 1 cut(s) 609
BseLI CCNNNNNNNGG 4 cut(s) 134, 489, 927, 1044
BseMI GCAATG 2 cut(s) 1065, 1368
BseMII CTCAG 4 cut(s) 350, 417, 540, 858
BseNI ACTGG 3 cut(s) 473, 1261, 1485
BseSI GKGCMC 1 cut(s) 91
BseXI GCAGC 3 cut(s) 402, 1228, 1333
BseYI CCCAGC 1 cut(s) 96
BshNI GGYRCC 1 cut(s) 140
BsiHKCI CYCGRG 1 cut(s) 84
BsiSI CCGG 3 cut(s) 85, 117, 135
BslFI GGGAC 3 cut(s) 95, 1223, 1273
BslI CCNNNNNNNGG 4 cut(s) 134, 489, 927, 1044
BsmAI GTCTC 3 cut(s) 29, 58, 1176
BsmFI GGGAC 3 cut(s) 95, 1223, 1273
BsmI GAATGC 1 cut(s) 583
BsoBI CYCGRG 1 cut(s) 84
Bsp120I GGGCCC 1 cut(s) 87
Bsp1286I GDGCHC 2 cut(s) 91, 921
Bsp143I GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
BspCNI CTCAG 4 cut(s) 351, 418, 541, 859
BspHI TCATGA 1 cut(s) 1514
BspLI GGNNCC 5 cut(s) 89, 121, 142, 1049, 1141
BspMAI CTGCAG 1 cut(s) 972
BspPI GGATC 6 cut(s) 114, 127, 287, 311, 605, 1090
BspQI GCTCTTC 1 cut(s) 519
BspT107I GGYRCC 1 cut(s) 140
BspTI CTTAAG 1 cut(s) 700
BsrBI CCGCTC 1 cut(s) 928
BsrDI GCAATG 2 cut(s) 1065, 1368
BsrFI RCCGGY 1 cut(s) 134
BsrI ACTGG 3 cut(s) 473, 1261, 1485
BssAI RCCGGY 1 cut(s) 134
BssECI CCNNGG 1 cut(s) 84
BssMI GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
BssNI GRCGYC 1 cut(s) 141
Bst4CI ACNGT 5 cut(s) 109, 740, 751, 880, 1297
Bst6I CTCTTC 2 cut(s) 519, 653
BstACI GRCGYC 1 cut(s) 141
BstAFI CTTAAG 1 cut(s) 700
BstAPI GCANNNNNTGC 1 cut(s) 1317
BstC8I GCNNGC 4 cut(s) 306, 375, 1072, 1368
BstDEI CTNAG 5 cut(s) 359, 426, 549, 767, 867
BstF5I GGATG 3 cut(s) 610, 658, 780
BstH2I RGCGCY 1 cut(s) 144
BstHHI GCGC 1 cut(s) 143
BstKTI GATC 7 cut(s) 122, 282, 319, 613, 1098, 1107, 1514
BstMAI GTCTC 3 cut(s) 29, 58, 1176
BstMBI GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
BstNSI RCATGY 5 cut(s) 436, 1189, 1411, 1441, 1462
BstSCI CCNGG 2 cut(s) 83, 84
BstSFI CTRYAG 3 cut(s) 736, 968, 1123
BstSLI GKGCMC 1 cut(s) 91
BstV1I GCAGC 3 cut(s) 402, 1228, 1333
BstX2I RGATCY 2 cut(s) 119, 1104
BstYI RGATCY 2 cut(s) 119, 1104
BsuI GTATCC 1 cut(s) 226
BtrI CACGTC 1 cut(s) 617
BtsCI GGATG 3 cut(s) 610, 658, 780
BtsI GCAGTG 1 cut(s) 965
BtsIMutI CAGTG 5 cut(s) 466, 885, 965, 1293, 1478
Cac8I GCNNGC 4 cut(s) 306, 375, 1072, 1368
CaiI CAGNNNCTG 1 cut(s) 1346
CciI TCATGA 1 cut(s) 1514
CfoI GCGC 1 cut(s) 143
Cfr10I RCCGGY 1 cut(s) 134
Cfr13I GGNCC 9 cut(s) 87, 88, 256, 312, 492, 553, 943, 1047, 1084
Cfr9I CCCGGG 1 cut(s) 84
CseI GACGC 3 cut(s) 1126, 1317, 1457
Csp6I GTAC 3 cut(s) 430, 546, 697
CspCI CAANNNNNGTGG 2 cut(s) 1282, 1317
CviQI GTAC 3 cut(s) 430, 546, 697
DdeI CTNAG 5 cut(s) 359, 426, 549, 767, 867
DinI GGCGCC 1 cut(s) 142
DpnI GATC 7 cut(s) 121, 281, 318, 612, 1097, 1106, 1513
DpnII GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
DraI TTTAAA 1 cut(s) 1237
EaeI YGGCCR 1 cut(s) 1391
Eam1104I CTCTTC 2 cut(s) 519, 653
EarI CTCTTC 2 cut(s) 519, 653
Eco147I AGGCCT 1 cut(s) 1070
Eco24I GRGCYC 2 cut(s) 91, 921
Eco47I GGWCC 2 cut(s) 943, 1084
Eco57I CTGAAG 2 cut(s) 181, 546
Eco88I CYCGRG 1 cut(s) 84
EcoO109I RGGNCCY 1 cut(s) 943
EcoRI GAATTC 2 cut(s) 158, 1008
EcoT38I GRGCYC 2 cut(s) 91, 921
EgeI GGCGCC 1 cut(s) 142
EheI GGCGCC 1 cut(s) 142
FaqI GGGAC 3 cut(s) 95, 1223, 1273
FauI CCCGC 2 cut(s) 121, 153
FblI GTMKAC 1 cut(s) 249
Fnu4HI GCNGC 7 cut(s) 81, 139, 259, 416, 929, 1242, 1347
FokI GGATG 3 cut(s) 617, 665, 767
FriOI GRGCYC 2 cut(s) 91, 921
Fsp4HI GCNGC 7 cut(s) 81, 139, 259, 416, 929, 1242, 1347
FspBI CTAG 1 cut(s) 758
GlaI GCGC 1 cut(s) 142
GluI GCNGC 7 cut(s) 81, 139, 259, 416, 929, 1242, 1347
GsaI CCCAGC 1 cut(s) 100
GsuI CTGGAG 1 cut(s) 705
HaeII RGCGCY 1 cut(s) 144
HapII CCGG 3 cut(s) 85, 117, 135
HgaI GACGC 3 cut(s) 1126, 1317, 1457
HhaI GCGC 1 cut(s) 143
Hin1I GRCGYC 1 cut(s) 141
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HindIII AAGCTT 2 cut(s) 339, 528
HinfI GANTC 5 cut(s) 14, 37, 475, 839, 1168
HpaII CCGG 3 cut(s) 85, 117, 135
HphI GGTGA 6 cut(s) 32, 289, 416, 620, 1076, 1466
Hpy166II GTNNAC 3 cut(s) 250, 297, 1167
Hpy188I TCNGA 6 cut(s) 124, 157, 205, 220, 1014, 1104
Hpy8I GTNNAC 3 cut(s) 250, 297, 1167
Hpy99I CGWCG 2 cut(s) 1311, 1399
HpyAV CCTTC 7 cut(s) 175, 705, 764, 1130, 1165, 1361, 1411
HpyCH4III ACNGT 5 cut(s) 109, 740, 751, 880, 1297
HpyCH4IV ACGT 2 cut(s) 243, 616
HpyCH4V TGCA 8 cut(s) 377, 910, 970, 1304, 1361, 1366, 1411, 1441
HpyF3I CTNAG 5 cut(s) 359, 426, 549, 767, 867
HpySE526I ACGT 2 cut(s) 243, 616
Hsp92I GRCGYC 1 cut(s) 141
HspAI GCGC 1 cut(s) 141
KasI GGCGCC 1 cut(s) 140
Kzo9I GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
LguI GCTCTTC 1 cut(s) 519
LmnI GCTCC 2 cut(s) 206, 967
Lsp1109I GCAGC 3 cut(s) 402, 1228, 1333
LweI GCATC 2 cut(s) 1333, 1348
MaeI CTAG 1 cut(s) 758
MaeII ACGT 2 cut(s) 243, 616
MaeIII GTNAC 3 cut(s) 715, 1223, 1454
MalI GATC 7 cut(s) 121, 281, 318, 612, 1097, 1106, 1513
MbiI CCGCTC 1 cut(s) 928
MboI GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
MboII GAAGA 3 cut(s) 506, 670, 1496
MflI RGATCY 2 cut(s) 119, 1104
MhlI GDGCHC 2 cut(s) 91, 921
MluCI AATT 4 cut(s) 158, 384, 856, 1008
Mly113I GGCGCC 1 cut(s) 141
MlyI GAGTC 2 cut(s) 31, 1162
MmeI TCCRAC 5 cut(s) 147, 228, 257, 1170, 1255
MroXI GAANNNNTTC 1 cut(s) 859
MseI TTAA 5 cut(s) 503, 701, 1236, 1328, 1463
MspCI CTTAAG 1 cut(s) 700
MspI CCGG 3 cut(s) 85, 117, 135
MspR9I CCNGG 2 cut(s) 85, 86
Mva1269I GAATGC 1 cut(s) 583
NarI GGCGCC 1 cut(s) 141
NciI CCSGG 2 cut(s) 85, 86
NdeII GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
NlaIV GGNNCC 5 cut(s) 89, 121, 142, 1049, 1141
NmeAIII GCCGAG 1 cut(s) 58
NmuCI GTSAC 3 cut(s) 715, 1223, 1454
NspI RCATGY 5 cut(s) 436, 1189, 1411, 1441, 1462
PagI TCATGA 1 cut(s) 1514
PceI AGGCCT 1 cut(s) 1070
PciI ACATGT 2 cut(s) 1185, 1458
PciSI GCTCTTC 1 cut(s) 519
PctI GAATGC 1 cut(s) 583
PdmI GAANNNNTTC 1 cut(s) 859
PfeI GAWTC 3 cut(s) 14, 475, 839
PflMI CCANNNNNTGG 1 cut(s) 489
PkrI GCNGC 7 cut(s) 82, 140, 260, 417, 930, 1243, 1348
PleI GAGTC 2 cut(s) 31, 1162
PluTI GGCGCC 1 cut(s) 144
PpsI GAGTC 2 cut(s) 31, 1162
PpuMI RGGWCCY 1 cut(s) 943
PscI ACATGT 2 cut(s) 1185, 1458
Psp1406I AACGTT 1 cut(s) 243
Psp5II RGGWCCY 1 cut(s) 943
PspFI CCCAGC 1 cut(s) 96
PspN4I GGNNCC 5 cut(s) 89, 121, 142, 1049, 1141
PspOMI GGGCCC 1 cut(s) 87
PspPI GGNCC 9 cut(s) 87, 88, 256, 312, 492, 553, 943, 1047, 1084
PspPPI RGGWCCY 1 cut(s) 943
PstI CTGCAG 1 cut(s) 972
PstNI CAGNNNCTG 1 cut(s) 1346
PsuI RGATCY 2 cut(s) 119, 1104
RsaI GTAC 3 cut(s) 431, 547, 698
RsaNI GTAC 3 cut(s) 430, 546, 697
SapI GCTCTTC 1 cut(s) 519
SaqAI TTAA 5 cut(s) 503, 701, 1236, 1328, 1463
SatI GCNGC 7 cut(s) 81, 139, 259, 416, 929, 1242, 1347
Sau3AI GATC 7 cut(s) 119, 279, 316, 610, 1095, 1104, 1511
Sau96I GGNCC 9 cut(s) 87, 88, 256, 312, 492, 553, 943, 1047, 1084
ScaI AGTACT 2 cut(s) 547, 698
SchI GAGTC 2 cut(s) 31, 1162
ScrFI CCNGG 2 cut(s) 85, 86
SduI GDGCHC 2 cut(s) 91, 921
SfaNI GCATC 2 cut(s) 1333, 1348
SfcI CTRYAG 3 cut(s) 736, 968, 1123
SfoI GGCGCC 1 cut(s) 142
SinI GGWCC 2 cut(s) 943, 1084
SmaI CCCGGG 1 cut(s) 86
SmlI CTYRAG 1 cut(s) 700
SmoI CTYRAG 1 cut(s) 700
SrfI GCCCGGGC 1 cut(s) 86
Sse9I AATT 4 cut(s) 158, 384, 856, 1008
SseBI AGGCCT 1 cut(s) 1070
SspDI GGCGCC 1 cut(s) 140
SspMI CTAG 1 cut(s) 758
StuI AGGCCT 1 cut(s) 1070
StyD4I CCNGG 2 cut(s) 83, 84
TaaI ACNGT 5 cut(s) 109, 740, 751, 880, 1297
TaiI ACGT 2 cut(s) 246, 619
TaqI TCGA 3 cut(s) 56, 1078, 1354
TasI AATT 4 cut(s) 158, 384, 856, 1008
TatI WGTACW 3 cut(s) 429, 545, 696
TauI GCSGC 4 cut(s) 83, 141, 261, 931
TfiI GAWTC 3 cut(s) 14, 475, 839
Tru1I TTAA 5 cut(s) 503, 701, 1236, 1328, 1463
Tru9I TTAA 5 cut(s) 503, 701, 1236, 1328, 1463
TscAI CASTG 5 cut(s) 473, 885, 972, 1300, 1485
TseFI GTSAC 3 cut(s) 715, 1223, 1454
TseI GCWGC 3 cut(s) 415, 1241, 1346
Tsp45I GTSAC 3 cut(s) 715, 1223, 1454
TspDTI ATGAA 4 cut(s) 506, 612, 1255, 1482
TspMI CCCGGG 1 cut(s) 84
TspRI CASTG 5 cut(s) 473, 885, 972, 1300, 1485
Van91I CCANNNNNTGG 1 cut(s) 489
Vha464I CTTAAG 1 cut(s) 700
VpaK11BI GGWCC 2 cut(s) 943, 1084
XapI RAATTY 3 cut(s) 158, 856, 1008
XbaI TCTAGA 1 cut(s) 757
XceI RCATGY 5 cut(s) 436, 1189, 1411, 1441, 1462
XmaI CCCGGG 1 cut(s) 84
XmiI GTMKAC 1 cut(s) 249
XmnI GAANNNNTTC 1 cut(s) 859
XspI CTAG 1 cut(s) 758
ZrmI AGTACT 2 cut(s) 547, 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.