Rmu_ssc0000218.1_g000005

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000218.1
Physical Location & Seq
Reverse (-)
11737 .. 15191
3455 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000218.1_g000005.1.cds

Sequence Viewer

Length: 1374 bp
atgggctgctgcgagtcctcgtttttaccacgacggctgcggcggcaaacgaaagaagagaagaacaaccgacagcagcagcagaacaagagcgcggcctcggcgtttaacgccacgtcgtttgcgaacggtccgccggaattgtccaacggaaacgacgccgtcgcggcgccgggattctcggagttctcgctggcggagctgaaaacggcgacgaacaacttcagctccgacttcatcgtctccgagagcggcgagaaagcccccaatgtcgtctacaagggccgcatccagaataacaacaaccgccgctggatcgccgtcaagaaatttaccaaactggcctggcctgaccccaaacaattcgccgatgaagcttggggagtagggaagctgaggcacaagaggcttgccaatttgattggatattgctgcgacggcgacgagaggctgctggtggccgagtacatgcccaacgacactcttgctaaacatctctttcactgggaaaatcagaccattgagtgggccatgcgattaagagttgctctatccattgctgaagcattggattattgcagtagtcaagtccgcccgttgtaccatgatttaaatgcgtacagggttctctttgatgagaatggtgatcctcggctttcttgttttgggttgatgaaaaacagcagggatggaaaaagttatagcactaatctcgcctatactcctcctgaatatcttaaaaatggaagggtgactccagaaagtgttaccttcagttttgggaccgtccttttagatcttctcagtgggaagcacatacctccaagtcatgctcttgatatgattcggggtagaaacattcttctcttaatggattcacatcttgagggtaatttttcaactgaagaggcaactgtggtttttgatcttgcttcacgatgtttgcaatatgaacctagggagcggccaaataccaaagaccttgcttcaacacttgccccactgcaaaataaatctgatgttccatcttatgtgatgctgggaattccaaagcacgaggaagcacctccgactccacaacaccctctttctgccatgggtgatgcctgttcaaggatggacctgacagctatccatcagattttggtaatgacacactacaaagatgatgaaggaaccaatgagttgtctttccaagaatggactcagcaaatgaaagatatgttggatgcaagaaagcgcggagacttggcatttcgtgacaaagattttaaatctgccatagacagttattctcaggtatgtatgctgaaacgtacgcagattgtagcatctcataaggagttagaggactccatttcttgccctgtttaa

Protein Analysis

457

Amino Acids

51.57

Weight (kDa)

6.48

Isoelectric Point (pI)

42.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 239
AccB1I GGYRCC 1 cut(s) 169
AccB7I CCANNNNNTGG 1 cut(s) 525
AccBSI CCGCTC 2 cut(s) 252, 964
AccI GTMKAC 1 cut(s) 276
AccII CGCG 3 cut(s) 95, 167, 1242
AclWI GGATC 2 cut(s) 323, 641
AcoI YGGCCR 2 cut(s) 459, 965
AcsI RAATTY 2 cut(s) 329, 1044
AcuI CTGAAG 4 cut(s) 208, 582, 757, 924
AcyI GRCGYC 2 cut(s) 159, 170
AfaI GTAC 4 cut(s) 467, 602, 620, 1318
AfiI CCNNNNNNNGG 2 cut(s) 525, 1113
AgsI TTSAA 3 cut(s) 900, 990, 1113
AjiI CACGTC 1 cut(s) 117
AjnI CCWGG 1 cut(s) 344
AjuI GAANNNNNNNTTGG 2 cut(s) 1208, 1240
AluBI AGCT 5 cut(s) 202, 228, 377, 394, 1130
AluI AGCT 5 cut(s) 202, 228, 377, 394, 1130
Alw26I GTCTC 2 cut(s) 247, 1239
AlwI GGATC 2 cut(s) 323, 641
AoxI GGCC 7 cut(s) 96, 283, 342, 347, 459, 528, 965
ApeKI GCWGC 7 cut(s) 6, 9, 37, 76, 79, 432, 451
ApoI RAATTY 2 cut(s) 329, 1044
Asp700I GAANNNNTTC 1 cut(s) 221
AspA2I CCTAGG 1 cut(s) 956
AspLEI GCGC 3 cut(s) 95, 172, 1242
AspS9I GGNCC 5 cut(s) 131, 283, 528, 783, 1120
AsuC2I CCSGG 1 cut(s) 174
AsuHPI GGTGA 3 cut(s) 656, 763, 1112
AvaII GGWCC 3 cut(s) 131, 783, 1120
AvrII CCTAGG 1 cut(s) 956
BanI GGYRCC 1 cut(s) 169
BauI CACGAG 1 cut(s) 1055
BbvCI CCTCAGC 1 cut(s) 395
BbvI GCAGC 5 cut(s) 24, 88, 91, 419, 438
BccI CCATC 4 cut(s) 683, 1033, 1111, 1143
BceAI ACGGC 5 cut(s) 50, 146, 225, 305, 454
BcgI CGANNNNNNTGC 4 cut(s) 467, 501, 694, 728
BciT130I CCWGG 1 cut(s) 346
BcnI CCSGG 1 cut(s) 174
BcoDI GTCTC 2 cut(s) 247, 1239
BfaI CTAG 1 cut(s) 957
BfoI RGCGCY 1 cut(s) 173
BglI GCCNNNNNGGC 1 cut(s) 167
BglII AGATCT 1 cut(s) 796
BlnI CCTAGG 1 cut(s) 956
Bme1390I CCNGG 2 cut(s) 174, 346
Bme18I GGWCC 3 cut(s) 131, 783, 1120
BmgBI CACGTC 1 cut(s) 117
BmgT120I GGNCC 5 cut(s) 131, 283, 528, 783, 1120
BmiI GGNNCC 3 cut(s) 171, 784, 1177
BmrFI CCNGG 2 cut(s) 174, 346
BmrI ACTGGG 1 cut(s) 514
BmsI GCATC 5 cut(s) 297, 1026, 1093, 1219, 1340
BmuI ACTGGG 1 cut(s) 514
BpmI CTGGAG 1 cut(s) 741
Bpu10I CCTNAGC 1 cut(s) 395
BpuEI CTTGAG 1 cut(s) 905
BpuMI CCSGG 1 cut(s) 174
BsaBI GATNNNNATC 1 cut(s) 879
BsaHI GRCGYC 2 cut(s) 159, 170
BsaJI CCNNGG 4 cut(s) 99, 650, 956, 1095
BsaXI ACNNNNNCTCC 2 cut(s) 212, 242
Bsc4I CCNNNNNNNGG 2 cut(s) 525, 1113
Bse1I ACTGG 2 cut(s) 345, 509
Bse3DI GCAATG 1 cut(s) 555
Bse8I GATNNNNATC 1 cut(s) 879
BseBI CCWGG 1 cut(s) 346
BseDI CCNNGG 4 cut(s) 99, 650, 956, 1095
BseGI GGATG 4 cut(s) 288, 694, 1122, 1234
BseJI GATNNNNATC 1 cut(s) 879
BseLI CCNNNNNNNGG 2 cut(s) 525, 1113
BseMI GCAATG 1 cut(s) 555
BseMII CTCAG 4 cut(s) 386, 817, 1220, 1310
BseNI ACTGG 2 cut(s) 345, 509
BseRI GAGGAG 1 cut(s) 714
BseXI GCAGC 5 cut(s) 24, 88, 91, 419, 438
BseYI CCCAGC 1 cut(s) 1039
Bsh1236I CGCG 3 cut(s) 95, 167, 1242
BshFI GGCC 7 cut(s) 98, 285, 344, 349, 461, 530, 967
BshNI GGYRCC 1 cut(s) 169
BsiSI CCGG 2 cut(s) 137, 173
BsiWI CGTACG 1 cut(s) 1316
BslFI GGGAC 1 cut(s) 796
BslI CCNNNNNNNGG 2 cut(s) 525, 1113
BsmAI GTCTC 2 cut(s) 247, 1239
BsmBI CGTCTC 1 cut(s) 247
BsmFI GGGAC 1 cut(s) 796
BsnI GGCC 7 cut(s) 98, 285, 344, 349, 461, 530, 967
Bsp143I GATC 4 cut(s) 315, 646, 796, 925
Bsp19I CCATGG 1 cut(s) 1095
BspANI GGCC 7 cut(s) 98, 285, 344, 349, 461, 530, 967
BspCNI CTCAG 4 cut(s) 387, 816, 1219, 1309
BspFNI CGCG 3 cut(s) 95, 167, 1242
BspLI GGNNCC 3 cut(s) 171, 784, 1177
BspPI GGATC 2 cut(s) 323, 641
BspT107I GGYRCC 1 cut(s) 169
BsrBI CCGCTC 2 cut(s) 252, 964
BsrDI GCAATG 1 cut(s) 555
BsrI ACTGG 2 cut(s) 345, 509
BssECI CCNNGG 4 cut(s) 99, 650, 956, 1095
BssMI GATC 4 cut(s) 315, 646, 796, 925
BssNI GRCGYC 2 cut(s) 159, 170
BssSI CACGAG 1 cut(s) 1055
BssT1I CCWWGG 2 cut(s) 956, 1095
Bst2BI CACGAG 1 cut(s) 1055
Bst2UI CCWGG 1 cut(s) 346
Bst4CI ACNGT 4 cut(s) 131, 787, 916, 1289
Bst6I CTCTTC 2 cut(s) 51, 900
BstACI GRCGYC 2 cut(s) 159, 170
BstC8I GCNNGC 2 cut(s) 195, 411
BstDEI CTNAG 4 cut(s) 395, 803, 1206, 1296
BstDSI CCRYGG 1 cut(s) 1095
BstENI CCTNNNNNAGG 1 cut(s) 1111
BstF5I GGATG 4 cut(s) 288, 694, 1122, 1234
BstFNI CGCG 3 cut(s) 95, 167, 1242
BstH2I RGCGCY 1 cut(s) 173
BstHHI GCGC 3 cut(s) 95, 172, 1242
BstKTI GATC 4 cut(s) 318, 649, 799, 928
BstMAI GTCTC 2 cut(s) 247, 1239
BstMBI GATC 4 cut(s) 315, 646, 796, 925
BstMWI GCNNNNNNNGC 8 cut(s) 43, 101, 110, 167, 199, 374, 406, 438
BstNI CCWGG 1 cut(s) 346
BstNSI RCATGY 1 cut(s) 472
BstSCI CCNGG 2 cut(s) 172, 344
BstUI CGCG 3 cut(s) 95, 167, 1242
BstV1I GCAGC 5 cut(s) 24, 88, 91, 419, 438
BstX2I RGATCY 1 cut(s) 796
BstYI RGATCY 1 cut(s) 796
BsuRI GGCC 7 cut(s) 98, 285, 344, 349, 461, 530, 967
BtgI CCRYGG 1 cut(s) 1095
BtrI CACGTC 1 cut(s) 117
BtsCI GGATG 4 cut(s) 288, 694, 1122, 1234
BtsI GCAGTG 1 cut(s) 1001
BtsIMutI CAGTG 3 cut(s) 502, 811, 1001
Cac8I GCNNGC 2 cut(s) 195, 411
CfoI GCGC 3 cut(s) 95, 172, 1242
Cfr13I GGNCC 5 cut(s) 131, 283, 528, 783, 1120
CpoI CGGWCCG 1 cut(s) 131
CseI GACGC 1 cut(s) 167
Csp6I GTAC 4 cut(s) 466, 601, 619, 1317
CspCI CAANNNNNGTGG 2 cut(s) 103, 138
CspI CGGWCCG 1 cut(s) 131
CviAII CATG 5 cut(s) 469, 532, 605, 830, 1096
CviQI GTAC 4 cut(s) 466, 601, 619, 1317
DdeI CTNAG 4 cut(s) 395, 803, 1206, 1296
DinI GGCGCC 1 cut(s) 171
DpnI GATC 4 cut(s) 317, 648, 798, 927
DpnII GATC 4 cut(s) 315, 646, 796, 925
DraI TTTAAA 2 cut(s) 612, 1273
DrdI GACNNNNNNGTC 1 cut(s) 239
DseDI GACNNNNNNGTC 1 cut(s) 239
EaeI YGGCCR 2 cut(s) 459, 965
Eam1104I CTCTTC 2 cut(s) 51, 900
EarI CTCTTC 2 cut(s) 51, 900
EciI GGCGGA 3 cut(s) 123, 212, 581
Eco130I CCWWGG 2 cut(s) 956, 1095
Eco47I GGWCC 3 cut(s) 131, 783, 1120
Eco57I CTGAAG 4 cut(s) 208, 582, 757, 924
EcoNI CCTNNNNNAGG 1 cut(s) 1111
EcoRI GAATTC 1 cut(s) 1044
EcoRII CCWGG 1 cut(s) 344
EcoT14I CCWWGG 2 cut(s) 956, 1095
EgeI GGCGCC 1 cut(s) 171
EheI GGCGCC 1 cut(s) 171
ErhI CCWWGG 2 cut(s) 956, 1095
Esp3I CGTCTC 1 cut(s) 247
FaeI CATG 5 cut(s) 472, 535, 608, 833, 1099
FaqI GGGAC 1 cut(s) 796
FatI CATG 5 cut(s) 468, 531, 604, 829, 1095
FblI GTMKAC 1 cut(s) 276
FokI GGATG 4 cut(s) 275, 701, 1129, 1241
FspBI CTAG 1 cut(s) 957
GlaI GCGC 3 cut(s) 94, 171, 1241
GsaI CCCAGC 1 cut(s) 1043
GsuI CTGGAG 1 cut(s) 741
HaeII RGCGCY 1 cut(s) 173
HaeIII GGCC 7 cut(s) 98, 285, 344, 349, 461, 530, 967
HapII CCGG 2 cut(s) 137, 173
HgaI GACGC 1 cut(s) 167
HhaI GCGC 3 cut(s) 95, 172, 1242
Hin1I GRCGYC 2 cut(s) 159, 170
Hin1II CATG 5 cut(s) 472, 535, 608, 833, 1099
Hin6I GCGC 3 cut(s) 93, 170, 1240
HinP1I GCGC 3 cut(s) 93, 170, 1240
HindIII AAGCTT 1 cut(s) 375
HinfI GANTC 8 cut(s) 14, 177, 754, 844, 875, 1072, 1204, 1352
HpaII CCGG 2 cut(s) 137, 173
HphI GGTGA 3 cut(s) 656, 763, 1112
Hpy166II GTNNAC 1 cut(s) 277
Hpy188I TCNGA 7 cut(s) 184, 232, 247, 516, 1018, 1071, 1140
Hpy188III TCNNGA 8 cut(s) 292, 325, 728, 758, 836, 884, 936, 1259
Hpy8I GTNNAC 1 cut(s) 277
Hpy99I CGWCG 7 cut(s) 36, 121, 161, 167, 217, 440, 446
HpyAV CCTTC 3 cut(s) 741, 781, 1166
HpyCH4III ACNGT 4 cut(s) 131, 787, 916, 1289
HpyCH4IV ACGT 2 cut(s) 116, 1315
HpyCH4V TGCA 4 cut(s) 579, 946, 1006, 1232
HpyF10VI GCNNNNNNNGC 8 cut(s) 43, 101, 110, 167, 199, 374, 406, 438
HpyF3I CTNAG 4 cut(s) 395, 803, 1206, 1296
HpySE526I ACGT 2 cut(s) 116, 1315
Hsp92I GRCGYC 2 cut(s) 159, 170
Hsp92II CATG 5 cut(s) 472, 535, 608, 833, 1099
HspAI GCGC 3 cut(s) 93, 170, 1240
KasI GGCGCC 1 cut(s) 169
Kzo9I GATC 4 cut(s) 315, 646, 796, 925
LmnI GCTCC 3 cut(s) 199, 233, 961
Lsp1109I GCAGC 5 cut(s) 24, 88, 91, 419, 438
LweI GCATC 5 cut(s) 297, 1026, 1093, 1219, 1340
MaeI CTAG 1 cut(s) 957
MaeII ACGT 2 cut(s) 116, 1315
MaeIII GTNAC 3 cut(s) 751, 766, 1259
MalI GATC 4 cut(s) 317, 648, 798, 927
MbiI CCGCTC 2 cut(s) 252, 964
MboI GATC 4 cut(s) 315, 646, 796, 925
MboII GAAGA 5 cut(s) 68, 73, 791, 854, 917
MflI RGATCY 1 cut(s) 796
MluCI AATT 6 cut(s) 140, 329, 362, 415, 892, 1044
Mly113I GGCGCC 1 cut(s) 170
MlyI GAGTC 5 cut(s) 23, 748, 1066, 1198, 1346
MmeI TCCRAC 4 cut(s) 171, 255, 1094, 1206
MroXI GAANNNNTTC 1 cut(s) 221
MseI TTAA 7 cut(s) 108, 539, 611, 738, 869, 1272, 1372
MspA1I CMGCKG 1 cut(s) 312
MspI CCGG 2 cut(s) 137, 173
MspR9I CCNGG 2 cut(s) 174, 346
MvaI CCWGG 1 cut(s) 346
MvnI CGCG 3 cut(s) 95, 167, 1242
MwoI GCNNNNNNNGC 8 cut(s) 43, 101, 110, 167, 199, 374, 406, 438
NarI GGCGCC 1 cut(s) 170
NciI CCSGG 1 cut(s) 174
NcoI CCATGG 1 cut(s) 1095
NdeII GATC 4 cut(s) 315, 646, 796, 925
NlaIII CATG 5 cut(s) 472, 535, 608, 833, 1099
NlaIV GGNNCC 3 cut(s) 171, 784, 1177
NmeAIII GCCGAG 3 cut(s) 80, 487, 631
NmuCI GTSAC 2 cut(s) 751, 1259
NspI RCATGY 1 cut(s) 472
PcsI WCGNNNNNNNCGW 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 221
PfeI GAWTC 3 cut(s) 177, 844, 875
Pfl23II CGTACG 1 cut(s) 1316
PflFI GACNNNGTC 1 cut(s) 161
PflMI CCANNNNNTGG 1 cut(s) 525
PleI GAGTC 5 cut(s) 22, 748, 1066, 1198, 1346
PluTI GGCGCC 1 cut(s) 173
PpsI GAGTC 5 cut(s) 22, 748, 1066, 1198, 1346
Psp6I CCWGG 1 cut(s) 344
PspFI CCCAGC 1 cut(s) 1039
PspGI CCWGG 1 cut(s) 344
PspLI CGTACG 1 cut(s) 1316
PspN4I GGNNCC 3 cut(s) 171, 784, 1177
PspPI GGNCC 5 cut(s) 131, 283, 528, 783, 1120
PsuI RGATCY 1 cut(s) 796
PsyI GACNNNGTC 1 cut(s) 161
RsaI GTAC 4 cut(s) 467, 602, 620, 1318
RsaNI GTAC 4 cut(s) 466, 601, 619, 1317
Rsr2I CGGWCCG 1 cut(s) 131
RsrII CGGWCCG 1 cut(s) 131
SaqAI TTAA 7 cut(s) 108, 539, 611, 738, 869, 1272, 1372
Sau3AI GATC 4 cut(s) 315, 646, 796, 925
Sau96I GGNCC 5 cut(s) 131, 283, 528, 783, 1120
SchI GAGTC 5 cut(s) 23, 748, 1066, 1198, 1346
ScrFI CCNGG 2 cut(s) 174, 346
SfaNI GCATC 5 cut(s) 297, 1026, 1093, 1219, 1340
SfoI GGCGCC 1 cut(s) 171
SinI GGWCC 3 cut(s) 131, 783, 1120
SmiI ATTTAAAT 1 cut(s) 612
SmlI CTYRAG 1 cut(s) 884
SmoI CTYRAG 1 cut(s) 884
Sse9I AATT 6 cut(s) 140, 329, 362, 415, 892, 1044
SspDI GGCGCC 1 cut(s) 169
SspMI CTAG 1 cut(s) 957
StyD4I CCNGG 2 cut(s) 172, 344
StyI CCWWGG 2 cut(s) 956, 1095
SwaI ATTTAAAT 1 cut(s) 612
TaaI ACNGT 4 cut(s) 131, 787, 916, 1289
TaiI ACGT 2 cut(s) 119, 1318
TasI AATT 6 cut(s) 140, 329, 362, 415, 892, 1044
TatI WGTACW 1 cut(s) 465
TauI GCSGC 8 cut(s) 43, 46, 98, 170, 255, 288, 312, 967
TfiI GAWTC 3 cut(s) 177, 844, 875
Tru1I TTAA 7 cut(s) 108, 539, 611, 738, 869, 1272, 1372
Tru9I TTAA 7 cut(s) 108, 539, 611, 738, 869, 1272, 1372
TscAI CASTG 3 cut(s) 509, 811, 1008
TseFI GTSAC 2 cut(s) 751, 1259
TseI GCWGC 7 cut(s) 6, 9, 37, 76, 79, 432, 451
Tsp45I GTSAC 2 cut(s) 751, 1259
TspDTI ATGAA 6 cut(s) 226, 387, 689, 966, 1185, 1229
TspGWI ACGGA 1 cut(s) 165
TspRI CASTG 3 cut(s) 509, 811, 1008
Tth111I GACNNNGTC 1 cut(s) 161
Van91I CCANNNNNTGG 1 cut(s) 525
VpaK11BI GGWCC 3 cut(s) 131, 783, 1120
XagI CCTNNNNNAGG 1 cut(s) 1111
XapI RAATTY 2 cut(s) 329, 1044
XceI RCATGY 1 cut(s) 472
XmaJI CCTAGG 1 cut(s) 956
XmiI GTMKAC 1 cut(s) 276
XmnI GAANNNNTTC 1 cut(s) 221
XspI CTAG 1 cut(s) 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.