MD10G1182700.v1.1

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0006341
Physical Location & Seq
Forward (+)
27556246 .. 27561506
5261 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1182700.v1.1.491

Sequence Viewer

Length: 2658 bp
ATGGCACATAATTCAGTTCCGCCTGGTTTTGTGTGTCGTACATCCTTCGTGCTGAAGAGAGTAAACACTGTTGAAGAAACCAAGAATGCCTTTGTTGATGCTTCTAGTGAAGAGCCAGTCCAGATGGATACCACGTCTGACCTGACTGACATGGATAAGTTGAAAAGACAGAGGCCATGGATACTTTTCGACCAAAGTGATCTCAACTCAGAGGAGTCTGACTGTGAACAGTTTAATACGGAACCCGCTACAAAACATTGCCTTCCGAAAGGTGTTACTCACGGATGTCCAGATTGCAGTGGTTGCCTGAAGGTGACTGGAAGGTGGCGTCCTGAAGATGCAAGAACAGATGTCCTTGAAGAAGCACCTCTTTTCTACCCTACAGAAGAGGAATTTAAAGACACTCTTAAGTATGTTGCAAAGATACGTGCAAGAGCAGAGCAATATGGTATCTGTCGTATTATTCCTCCTCCTTCCTGGAAACCTCCGTGTCTTATTGAAGGAAAAAAAATGTGGAAAAGTTCTACATTTTCTACCCATATTCAGCGAATTGATGGGATACGAAATCAGTATTCACCTAGTAAAATGGTTGGCTTAAATGAAAGCCCAAAAAGGAAGAGGAGAAGAATCTTGACAGTGGGATTGGACTGTGGATCTACCTCAAGTCCAGGTGAAACTGAACATTCTTATATCAAAGGTTTTGAAACAGAACCTGGACAAGAATTCACTCTTGAGAATTTTAGGAGTTATGCTGCTGATTTCAAGCGTCAGTATTTCCGCAAAAGTGAAGTCGCTGGTGGTCAAGAGAAGTGGGTGCCATCGCTGGAGAATATTGACGCTGAATATAAACGTATAGCTGAAAACCCAACTGAAGAAATTGAGGTGCTTTGTGGTGATAATTTGGAGACTAAAGCTCTTGGAAGCGGATTTCCAACAGTATCCAGTGATTCCAATCCTTTGGAAAAGTCAGATTACCCTGAATATTTAGCTTCAGGTTGGAACCTAAATAATCTACCCAGATTGCCCAGTTCTCTTCTTTCTTTTGAAAGCCATGACACTTGCCATATTTTGGCGCCTCGGACTCGTGTAGGAATGTGCTTTTCATCTTTTCATTGGAAAGTTGAAGAGCACCGCTTATACTCACTGTCTTACTTGCATCTGGGTGCTCCTAAAATTTGGTATGGTGTCCCTGGTAAATACTACGTTAATTTTGAGGCAGCCATGAGGAGTTCATTTCCAGATTCATGCAAACTAGAACACCCTGAATTGCATCATATGCTGGTTAAACAAATATCCCCGTCTGCATTGAAATCACAGGGTGTACCAGTCTTCCGTTGCATTCAGTCTCCTGGGGAGTTTGTTCTTGTCCTTCCAAGGGCTTATCATTCAGGATTTGATTCTGGTTTTAATTTTTCCGAGACAGCATGTGTTGCTCCCTTGGACTGGTTGCCTCATGGACAGGATGCCGTTGAACTTTACTGTGAACAGGGGAGGAGAACATCTATATCACATGATAAGCTGCTGCTCGGAGCAGCTAGAGAGGCTGTGAGGGCACAATGGGATTCACTGTTCAGGAAGAACGCTGCGGATAATATATTCTGGAAAGATGTCCATGGAAAGGATGGGATCTTAACACATGCATTCAAGTCGCGCCTCAAGTCTGAAGGCAGTAGAAGGAAATATCTCTTCAACTCTGCAAAATCAGAGAGGATGAAATCAAATTTTAATGTTACAAGCAAAAGGGAATGCAGCATTTGTCTCTGTGATCTGCATTTTTCTGCAGTAGTTTGTTCTTGTTGTGAAGACAGATATTCATGTCTGCTACACGCAAAGCAGCTCTGTTCTTGTGCTTGGAGTGACAAGATTTTCCTCTACCGTCACGAGATCTGTGATTTACAGCTACTTGTTGAAGCTTTGGAAGGAAAGTTCGACGCAGTCTACAAATGGGGCAAAGATGATCTTGGACTGACGCTGCATATTCCCAAGAACAGTCAAAATTCACCGGGGCATGTGGAGGGTGCCTCTGACGCCAATAAACAGAAAGAGTCCATTTCTCGAATTAGGGAAGAAGTGAAGGCACGGATTCTGCGATCTACAACCTCAAACAAATCAAATTCAAATGATTACCCAACAGGATCCCCCGACTCTGCGACAGCCACTGGGAACGGGAAGAGTTCAGTCTCTAGCATCATGGATAAGGTGAAGGCTCATGCACTCCTCCGATCAACAATCTTCAATGAACTGAAAACAAAGGAGAATATAGTAGGACCTGCCATCGGCACAAACACAACAGGAAGCAATGCTACTCTTACGCCGAAAGTGGCTGCAGAGGGGACAACGAATAATGCTTCTCTTCTGCCGAAAGAGGCGATAGACATGATGGAGGGGACATCCGATGTGTCATCTGCAAGTACAAGTGAAACAAGCTCCTCAGACTCTGACGATGTAATACCAGATCTTAACATTCTTCTGCGCGGAAGACAAAATGTTCGATCCCCTCCGGTGAAAAGCAATGTTCCTCAAAAGCTTCCCAAGGGTGGTCGTCCGGCCGACAATTATAAGGCATCTTCTTCGAGCCATTTGGCTTCCAAGAGTCAAACCCCAAGACAGCCTTGTCCTCAGAGTCCAATTCTTATTAGTGATGACAGCGATGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034720 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
JmjC JmjN zf-C5HC2

Protein Analysis

886

Amino Acids

98.57

Weight (kDa)

7.09

Isoelectric Point (pI)

55.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjN PF02375 123 - 156 2.2e-16 jmjN domain
JmjC PF02373 363 - 474 5.6e-31 JmjC domain, hydroxylase
zf-C5HC2 PF02928 583 - 633 2.4e-11 C5HC2 zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2559
AasI GACNNNNNNGTC 1 cut(s) 2613
Acc36I ACCTGC 1 cut(s) 2278
AccB1I GGYRCC 3 cut(s) 814, 1072, 2018
AccB7I CCANNNNNTGG 1 cut(s) 1069
AccI GTMKAC 1 cut(s) 1938
AccII CGCG 2 cut(s) 1651, 2475
AciI CCGC 7 cut(s) 20, 246, 778, 924, 1132, 1586, 2475
AclWI GGATC 5 cut(s) 661, 1634, 2130, 2143, 2487
AcoI YGGCCR 1 cut(s) 2547
AcsI RAATTY 7 cut(s) 392, 722, 736, 1173, 1720, 1996, 2113
AcuI CTGAAG 6 cut(s) 74, 329, 354, 891, 975, 1683
AcyI GRCGYC 3 cut(s) 328, 1073, 2028
AdeI CACNNNGTG 1 cut(s) 1319
AfaI GTAC 3 cut(s) 40, 1323, 2413
AfiI CCNNNNNNNGG 6 cut(s) 1069, 1375, 1443, 1618, 2276, 2537
AflII CTTAAG 1 cut(s) 407
AjiI CACGTC 1 cut(s) 135
AjnI CCWGG 6 cut(s) 22, 476, 667, 712, 1189, 1348
AloI GAACNNNNNNTCC 4 cut(s) 1553, 1585, 1910, 1942
Alw21I GWGCWC 2 cut(s) 1131, 1168
Alw26I GTCTC 5 cut(s) 899, 1350, 1412, 1763, 2185
AlwI GGATC 5 cut(s) 661, 1634, 2130, 2143, 2487
AlwNI CAGNNNCTG 3 cut(s) 713, 2159, 2438
AoxI GGCC 2 cut(s) 173, 2547
ApoI RAATTY 7 cut(s) 392, 722, 736, 1173, 1720, 1996, 2113
ArsI GACNNNNNNTTYG 4 cut(s) 774, 806, 2472, 2504
AspLEI GCGC 3 cut(s) 1075, 1653, 2475
AspS9I GGNCC 1 cut(s) 2267
AsuC2I CCSGG 1 cut(s) 2004
AsuHPI GGTGA 7 cut(s) 325, 567, 683, 905, 1992, 2212, 2515
AvaII GGWCC 1 cut(s) 2267
BaeGI GKGCMC 1 cut(s) 1555
BamHI GGATCC 1 cut(s) 2135
BanI GGYRCC 3 cut(s) 814, 1072, 2018
BarI GAAGNNNNNNTAC 2 cut(s) 2287, 2319
BauI CACGAG 2 cut(s) 1083, 1880
BbsI GAAGAC 3 cut(s) 1321, 1809, 2485
Bbv12I GWGCWC 2 cut(s) 1131, 1168
BccI CCATC 7 cut(s) 118, 548, 826, 1616, 2282, 2374, 2645
BceAI ACGGC 1 cut(s) 1451
BcgI CGANNNNNNTGC 4 cut(s) 1629, 1663, 2553, 2587
BciT130I CCWGG 6 cut(s) 24, 478, 669, 714, 1191, 1350
BciVI GTATCC 4 cut(s) 121, 174, 552, 949
BcnI CCSGG 1 cut(s) 2004
BcoDI GTCTC 5 cut(s) 899, 1350, 1412, 1763, 2185
BfaI CTAG 5 cut(s) 105, 579, 1253, 1536, 2184
BfmI CTRYAG 3 cut(s) 381, 1779, 2325
BfoI RGCGCY 1 cut(s) 1076
BfrI CTTAAG 1 cut(s) 407
BfuAI ACCTGC 1 cut(s) 2278
BfuI GTATCC 4 cut(s) 121, 174, 552, 949
BglII AGATCT 2 cut(s) 1884, 2455
Bme1390I CCNGG 7 cut(s) 24, 478, 669, 714, 1191, 1350, 2004
Bme18I GGWCC 1 cut(s) 2267
BmgBI CACGTC 1 cut(s) 135
BmgT120I GGNCC 1 cut(s) 2267
BmiI GGNNCC 6 cut(s) 243, 816, 1001, 1074, 2020, 2137
BmrFI CCNGG 7 cut(s) 24, 478, 669, 714, 1191, 1350, 2004
BmrI ACTGGG 2 cut(s) 1020, 2169
BmsI GCATC 7 cut(s) 88, 328, 1165, 1279, 1453, 2196, 2573
BmuI ACTGGG 2 cut(s) 1020, 2169
BpiI GAAGAC 3 cut(s) 1321, 1809, 2485
BplI GAGNNNNNCTC 2 cut(s) 2006, 2038
BpmI CTGGAG 1 cut(s) 845
BpuEI CTTGAG 3 cut(s) 646, 752, 1640
BpuMI CCSGG 1 cut(s) 2004
BsaAI YACGTR 1 cut(s) 428
BsaBI GATNNNNATC 1 cut(s) 951
BsaHI GRCGYC 3 cut(s) 328, 1073, 2028
BsaJI CCNNGG 9 cut(s) 176, 1076, 1189, 1349, 1373, 1437, 1612, 2003, 2532
BsaWI WCCGGW 1 cut(s) 2500
Bsc4I CCNNNNNNNGG 6 cut(s) 1069, 1375, 1443, 1618, 2276, 2537
Bse1I ACTGG 7 cut(s) 116, 322, 942, 1026, 1325, 1448, 2164
Bse3DI GCAATG 3 cut(s) 256, 2305, 2518
Bse8I GATNNNNATC 1 cut(s) 951
BseBI CCWGG 6 cut(s) 24, 478, 669, 714, 1191, 1350
BseDI CCNNGG 9 cut(s) 176, 1076, 1189, 1349, 1373, 1437, 1612, 2003, 2532
BseGI GGATG 6 cut(s) 41, 290, 1468, 1627, 1716, 2390
BseJI GATNNNNATC 1 cut(s) 951
BseLI CCNNNNNNNGG 6 cut(s) 1069, 1375, 1443, 1618, 2276, 2537
BseMI GCAATG 3 cut(s) 256, 2305, 2518
BseMII CTCAG 3 cut(s) 222, 2445, 2633
BseNI ACTGG 7 cut(s) 116, 322, 942, 1026, 1325, 1448, 2164
BseRI GAGGAG 7 cut(s) 227, 459, 634, 1240, 1507, 2207, 2419
BseSI GKGCMC 1 cut(s) 1555
BseX3I CGGCCG 1 cut(s) 2547
Bsh1236I CGCG 2 cut(s) 1651, 2475
Bsh1285I CGRYCG 1 cut(s) 2550
BshFI GGCC 2 cut(s) 175, 2549
BshNI GGYRCC 3 cut(s) 814, 1072, 2018
BsiEI CGRYCG 1 cut(s) 2550
BsiHKAI GWGCWC 2 cut(s) 1131, 1168
BsiSI CCGG 3 cut(s) 2003, 2501, 2546
BslFI GGGAC 3 cut(s) 1172, 2347, 2401
BslI CCNNNNNNNGG 6 cut(s) 1069, 1375, 1443, 1618, 2276, 2537
BsmAI GTCTC 5 cut(s) 899, 1350, 1412, 1763, 2185
BsmFI GGGAC 3 cut(s) 1172, 2347, 2401
BsmI GAATGC 4 cut(s) 91, 1338, 1640, 1751
BsnI GGCC 2 cut(s) 175, 2549
Bsp1286I GDGCHC 3 cut(s) 1131, 1168, 1555
Bsp19I CCATGG 2 cut(s) 176, 1612
BspACI CCGC 7 cut(s) 20, 246, 778, 924, 1132, 1586, 2475
BspANI GGCC 2 cut(s) 175, 2549
BspCNI CTCAG 3 cut(s) 221, 2444, 2632
BspFNI CGCG 2 cut(s) 1651, 2475
BspLI GGNNCC 6 cut(s) 243, 816, 1001, 1074, 2020, 2137
BspMAI CTGCAG 2 cut(s) 1783, 2329
BspMI ACCTGC 1 cut(s) 2278
BspPI GGATC 5 cut(s) 661, 1634, 2130, 2143, 2487
BspQI GCTCTTC 2 cut(s) 105, 1119
BspT107I GGYRCC 3 cut(s) 814, 1072, 2018
BspTI CTTAAG 1 cut(s) 407
BsrDI GCAATG 3 cut(s) 256, 2305, 2518
BsrI ACTGG 7 cut(s) 116, 322, 942, 1026, 1325, 1448, 2164
BssECI CCNNGG 9 cut(s) 176, 1076, 1189, 1349, 1373, 1437, 1612, 2003, 2532
BssNI GRCGYC 3 cut(s) 328, 1073, 2028
BssSI CACGAG 2 cut(s) 1083, 1880
BssT1I CCWWGG 5 cut(s) 176, 1373, 1437, 1612, 2532
Bst2BI CACGAG 2 cut(s) 1083, 1880
Bst2UI CCWGG 6 cut(s) 24, 478, 669, 714, 1191, 1350
Bst6I CTCTTC 9 cut(s) 50, 105, 381, 611, 1038, 1119, 1691, 2165, 2358
BstACI GRCGYC 3 cut(s) 328, 1073, 2028
BstAFI CTTAAG 1 cut(s) 407
BstAPI GCANNNNNTGC 3 cut(s) 303, 1276, 1430
BstBAI YACGTR 1 cut(s) 428
BstDEI CTNAG 3 cut(s) 208, 2431, 2619
BstDSI CCRYGG 2 cut(s) 176, 1612
BstF5I GGATG 6 cut(s) 41, 290, 1468, 1627, 1716, 2390
BstFNI CGCG 2 cut(s) 1651, 2475
BstH2I RGCGCY 1 cut(s) 1076
BstHHI GCGC 3 cut(s) 1075, 1653, 2475
BstMAI GTCTC 5 cut(s) 899, 1350, 1412, 1763, 2185
BstMCI CGRYCG 1 cut(s) 2550
BstMWI GCNNNNNNNGC 6 cut(s) 303, 1276, 1430, 1541, 1550, 2027
BstNI CCWGG 6 cut(s) 24, 478, 669, 714, 1191, 1350
BstNSI RCATGY 3 cut(s) 1428, 1640, 2012
BstSCI CCNGG 7 cut(s) 22, 476, 667, 712, 1189, 1348, 2002
BstSFI CTRYAG 3 cut(s) 381, 1779, 2325
BstSLI GKGCMC 1 cut(s) 1555
BstUI CGCG 2 cut(s) 1651, 2475
BstV2I GAAGAC 3 cut(s) 1321, 1809, 2485
BstX2I RGATCY 5 cut(s) 653, 1626, 1884, 2135, 2455
BstXI CCANNNNNNTGG 1 cut(s) 958
BstYI RGATCY 5 cut(s) 653, 1626, 1884, 2135, 2455
BstZI CGGCCG 1 cut(s) 2547
BsuI GTATCC 4 cut(s) 121, 174, 552, 949
BsuRI GGCC 2 cut(s) 175, 2549
BtgI CCRYGG 2 cut(s) 176, 1612
BtgZI GCGATG 1 cut(s) 804
BtrI CACGTC 1 cut(s) 135
BtsCI GGATG 6 cut(s) 41, 290, 1468, 1627, 1716, 2390
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 7 cut(s) 66, 304, 642, 949, 1142, 1565, 2157
BveI ACCTGC 1 cut(s) 2278
CaiI CAGNNNCTG 3 cut(s) 713, 2159, 2438
CfoI GCGC 3 cut(s) 1075, 1653, 2475
Cfr13I GGNCC 1 cut(s) 2267
CseI GACGC 6 cut(s) 317, 755, 845, 1940, 1978, 2036
Csp6I GTAC 3 cut(s) 39, 1322, 2412
CspCI CAANNNNNGTGG 2 cut(s) 791, 826
CviQI GTAC 3 cut(s) 39, 1322, 2412
DdeI CTNAG 3 cut(s) 208, 2431, 2619
DinI GGCGCC 1 cut(s) 1074
DraI TTTAAA 1 cut(s) 397
DraIII CACNNNGTG 1 cut(s) 1319
DrdI GACNNNNNNGTC 1 cut(s) 2613
DseDI GACNNNNNNGTC 1 cut(s) 2613
EaeI YGGCCR 1 cut(s) 2547
EagI CGGCCG 1 cut(s) 2547
Eam1104I CTCTTC 9 cut(s) 50, 105, 381, 611, 1038, 1119, 1691, 2165, 2358
EarI CTCTTC 9 cut(s) 50, 105, 381, 611, 1038, 1119, 1691, 2165, 2358
EciI GGCGGA 1 cut(s) 9
EclXI CGGCCG 1 cut(s) 2547
Eco130I CCWWGG 5 cut(s) 176, 1373, 1437, 1612, 2532
Eco47I GGWCC 1 cut(s) 2267
Eco52I CGGCCG 1 cut(s) 2547
Eco57I CTGAAG 6 cut(s) 74, 329, 354, 891, 975, 1683
EcoO109I RGGNCCY 1 cut(s) 2267
EcoRI GAATTC 1 cut(s) 722
EcoRII CCWGG 6 cut(s) 22, 476, 667, 712, 1189, 1348
EcoT14I CCWWGG 5 cut(s) 176, 1373, 1437, 1612, 2532
EcoT22I ATGCAT 1 cut(s) 1642
EgeI GGCGCC 1 cut(s) 1074
EheI GGCGCC 1 cut(s) 1074
ErhI CCWWGG 5 cut(s) 176, 1373, 1437, 1612, 2532
FaqI GGGAC 3 cut(s) 1172, 2347, 2401
FauI CCCGC 1 cut(s) 253
FauNDI CATATG 1 cut(s) 1275
FblI GTMKAC 1 cut(s) 1938
FokI GGATG 6 cut(s) 28, 297, 1475, 1634, 1723, 2377
FspBI CTAG 5 cut(s) 105, 579, 1253, 1536, 2184
GlaI GCGC 3 cut(s) 1074, 1652, 2474
GsuI CTGGAG 1 cut(s) 845
HaeII RGCGCY 1 cut(s) 1076
HaeIII GGCC 2 cut(s) 175, 2549
HapII CCGG 3 cut(s) 2003, 2501, 2546
HgaI GACGC 6 cut(s) 317, 755, 845, 1940, 1978, 2036
HhaI GCGC 3 cut(s) 1075, 1653, 2475
Hin1I GRCGYC 3 cut(s) 328, 1073, 2028
Hin6I GCGC 3 cut(s) 1073, 1651, 2473
HinP1I GCGC 3 cut(s) 1073, 1651, 2473
HindIII AAGCTT 2 cut(s) 1911, 2525
HpaII CCGG 3 cut(s) 2003, 2501, 2546
HphI GGTGA 7 cut(s) 325, 567, 683, 905, 1992, 2212, 2515
Hpy166II GTNNAC 5 cut(s) 64, 227, 1322, 1484, 1939
Hpy8I GTNNAC 5 cut(s) 64, 227, 1322, 1484, 1939
Hpy99I CGWCG 1 cut(s) 1934
HpyCH4IV ACGT 4 cut(s) 134, 427, 850, 1203
HpyF10VI GCNNNNNNNGC 6 cut(s) 303, 1276, 1430, 1541, 1550, 2027
HpyF3I CTNAG 3 cut(s) 208, 2431, 2619
HpySE526I ACGT 4 cut(s) 134, 427, 850, 1203
Hsp92I GRCGYC 3 cut(s) 328, 1073, 2028
HspAI GCGC 3 cut(s) 1073, 1651, 2473
KasI GGCGCC 1 cut(s) 1072
LguI GCTCTTC 2 cut(s) 105, 1119
LmnI GCTCC 4 cut(s) 1171, 1438, 1529, 2432
LweI GCATC 7 cut(s) 88, 328, 1165, 1279, 1453, 2196, 2573
MaeI CTAG 5 cut(s) 105, 579, 1253, 1536, 2184
MaeII ACGT 4 cut(s) 134, 427, 850, 1203
MaeIII GTNAC 5 cut(s) 274, 313, 1729, 1856, 1877
MflI RGATCY 5 cut(s) 653, 1626, 1884, 2135, 2455
MhlI GDGCHC 3 cut(s) 1131, 1168, 1555
Mly113I GGCGCC 1 cut(s) 1073
MlyI GAGTC 7 cut(s) 224, 1075, 2054, 2138, 2429, 2602, 2632
MmeI TCCRAC 2 cut(s) 956, 977
Mph1103I ATGCAT 1 cut(s) 1642
MslI CAYNNNNRTG 1 cut(s) 1161
MspCI CTTAAG 1 cut(s) 407
MspI CCGG 3 cut(s) 2003, 2501, 2546
MspR9I CCNGG 7 cut(s) 24, 478, 669, 714, 1191, 1350, 2004
Mva1269I GAATGC 4 cut(s) 91, 1338, 1640, 1751
MvaI CCWGG 6 cut(s) 24, 478, 669, 714, 1191, 1350
MvnI CGCG 2 cut(s) 1651, 2475
MwoI GCNNNNNNNGC 6 cut(s) 303, 1276, 1430, 1541, 1550, 2027
NarI GGCGCC 1 cut(s) 1073
NciI CCSGG 1 cut(s) 2004
NcoI CCATGG 2 cut(s) 176, 1612
NdeI CATATG 1 cut(s) 1275
NlaIV GGNNCC 6 cut(s) 243, 816, 1001, 1074, 2020, 2137
NmuCI GTSAC 3 cut(s) 313, 1856, 1877
NsiI ATGCAT 1 cut(s) 1642
NspI RCATGY 3 cut(s) 1428, 1640, 2012
PciSI GCTCTTC 2 cut(s) 105, 1119
PcsI WCGNNNNNNNCGW 1 cut(s) 2086
PctI GAATGC 4 cut(s) 91, 1338, 1640, 1751
PfeI GAWTC 6 cut(s) 627, 947, 1241, 1397, 1562, 2083
PflFI GACNNNGTC 1 cut(s) 1934
PflMI CCANNNNNTGG 1 cut(s) 1069
PfoI TCCNGGA 1 cut(s) 476
PleI GAGTC 7 cut(s) 223, 1075, 2053, 2138, 2429, 2601, 2631
PluTI GGCGCC 1 cut(s) 1076
PpsI GAGTC 7 cut(s) 223, 1075, 2053, 2138, 2429, 2601, 2631
Ppu21I YACGTR 1 cut(s) 428
PpuMI RGGWCCY 1 cut(s) 2267
PsiI TTATAA 1 cut(s) 2559
Psp5II RGGWCCY 1 cut(s) 2267
Psp6I CCWGG 6 cut(s) 22, 476, 667, 712, 1189, 1348
PspGI CCWGG 6 cut(s) 22, 476, 667, 712, 1189, 1348
PspN4I GGNNCC 6 cut(s) 243, 816, 1001, 1074, 2020, 2137
PspPI GGNCC 1 cut(s) 2267
PspPPI RGGWCCY 1 cut(s) 2267
PstI CTGCAG 2 cut(s) 1783, 2329
PstNI CAGNNNCTG 3 cut(s) 713, 2159, 2438
PsuI RGATCY 5 cut(s) 653, 1626, 1884, 2135, 2455
PsyI GACNNNGTC 1 cut(s) 1934
RsaI GTAC 3 cut(s) 40, 1323, 2413
RsaNI GTAC 3 cut(s) 39, 1322, 2412
RseI CAYNNNNRTG 1 cut(s) 1161
SapI GCTCTTC 2 cut(s) 105, 1119
Sau96I GGNCC 1 cut(s) 2267
SchI GAGTC 7 cut(s) 224, 1075, 2054, 2138, 2429, 2602, 2632
ScrFI CCNGG 7 cut(s) 24, 478, 669, 714, 1191, 1350, 2004
SduI GDGCHC 3 cut(s) 1131, 1168, 1555
SfaNI GCATC 7 cut(s) 88, 328, 1165, 1279, 1453, 2196, 2573
SfcI CTRYAG 3 cut(s) 381, 1779, 2325
SfoI GGCGCC 1 cut(s) 1074
SinI GGWCC 1 cut(s) 2267
SmiMI CAYNNNNRTG 1 cut(s) 1161
SmlI CTYRAG 4 cut(s) 407, 661, 731, 1655
SmoI CTYRAG 4 cut(s) 407, 661, 731, 1655
SsiI CCGC 7 cut(s) 20, 246, 778, 924, 1132, 1586, 2475
SspDI GGCGCC 1 cut(s) 1072
SspI AATATT 2 cut(s) 832, 983
SspMI CTAG 5 cut(s) 105, 579, 1253, 1536, 2184
StyD4I CCNGG 7 cut(s) 22, 476, 667, 712, 1189, 1348, 2002
StyI CCWWGG 5 cut(s) 176, 1373, 1437, 1612, 2532
TaiI ACGT 4 cut(s) 137, 430, 853, 1206
TaqI TCGA 5 cut(s) 189, 1929, 2056, 2491, 2573
TatI WGTACW 1 cut(s) 2411
TfiI GAWTC 6 cut(s) 627, 947, 1241, 1397, 1562, 2083
TscAI CASTG 7 cut(s) 73, 304, 642, 949, 1149, 1572, 2164
TseFI GTSAC 3 cut(s) 313, 1856, 1877
Tsp45I GTSAC 3 cut(s) 313, 1856, 1877
TspDTI ATGAA 8 cut(s) 615, 1092, 1100, 1221, 1233, 1727, 1803, 2253
TspGWI ACGGA 5 cut(s) 254, 297, 477, 1322, 2095
TspRI CASTG 7 cut(s) 73, 304, 642, 949, 1149, 1572, 2164
Tth111I GACNNNGTC 1 cut(s) 1934
Van91I CCANNNNNTGG 1 cut(s) 1069
Vha464I CTTAAG 1 cut(s) 407
VpaK11BI GGWCC 1 cut(s) 2267
XapI RAATTY 7 cut(s) 392, 722, 736, 1173, 1720, 1996, 2113
XceI RCATGY 3 cut(s) 1428, 1640, 2012
XcmI CCANNNNNNNNNTGG 1 cut(s) 1619
XmiI GTMKAC 1 cut(s) 1938
XspI CTAG 5 cut(s) 105, 579, 1253, 1536, 2184
Zsp2I ATGCAT 1 cut(s) 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.