Rh6CG316200

lysine-specific demethylase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0006341
Physical Location & Seq
Forward (+)
50146643 .. 50152418
5776 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG316200.1

Sequence Viewer

Length: 2118 bp
ATGGATGGCTCTGATGAGAGCACAAAAAAGAAGAGAAGAATCTCGACAGTGGGTTTGGACTCTGGATTTGAATCTACCTCAAGTCTGGGTGAAACAGGACAGTCTGATGTCAATTGCTTTGAATCGGAACCTGGTCCAGAATTCACTCTTGACAGTTTTAAGAGGTATGCAGATGATTTCAAGCATCAGTATTTCTGCAAAAGTGACGTCATAGGTAATCAAGAGCAGTGGGAGCCGTCAGTGGAGAATATTGAAGCTGAATATAAACGTATCATTGAAAACCCAACTGAAGGAATCGAGGTGCTTTGTGGAAATTATTTGGAGACTAAAGCGTTTGGCAGTGGATTTCCAACAGTATCACATGATTCCAATCCTTTGGAAACATCAGATTACCCTGATTGCTTGCCATCTGGCTGGAATTTAAATAATCTACCCAGACTCCCTGGTTCTCTTCTTTCTTTTGAAAGCCATGACACATGTCATATTTTAGTGCCTCAGACTCGTGTAGGAATGTGTTTTTCATCTAGTCTTTGGAGAGTTGAAGAGCACCACTTATACTCATTGTGTTACAATCATCTGGGTGCTCCTAAAGTTTGGTATGGTGTCCCTGGGAAATCCCGCATAAATTTTGAGGCAGCCATGAGGAAGTCCTTTCCAGATTTATTAAAACAGCATAGGCTGGTTAAGCAAGTATCCCCCTCCACATTGAAATCAGAGGACATTCCTGTCTTTCGTTGCATTCAGCGTCCTGGAGAGTTTGTTCTTGTCTTCCCTGGAGCTTATCATTCAGAATTCGATTGTGGCTTTAATTTTTCTGAGAGGGCATGTTTTGCTCCTCTAGACTGGTTGCCTCATGGACAGAATGCTGTTGAACTTTACTCTGAACAGGGGAGGAAAACAGCTATATCCTATGATAAGGTGTTGCTTGGAGCAGCTAGGGAAGCTGTAAGGGCACAATGGGAAATTTCACTGTTGAAGAAGAACAAAAACTCAGAGAATTTACGCTGGAAAAATGCCTGCTTAAAGGATGGGATCTTAACAGAAGCACTCAAGTTGCGTCTCAAGTCTGAAGAGATTCGAAGGAAATATTTTTGCACCTCTTTGAAGTCACAGAGGATGAATTCAGATTTTGATGCTACCATGAAAAGGGAATGCAGCATTTGTTTCTGCGATCTTCATTTCTCTGCAGTAGGTTGTCCTTGTTCTGTAGACAGATACTCATGTCTGTTTCATGCAAAGCAGTTCTGTTTTTGTGCTTGGAGTAACAAGTTTTTCCTCTACCGTCATGAAATCAGCGAGCTAAATCTACTTGTTGAAGCTTTGGAAGGAAAATTAAGTGCAGTCATCAAATGGGCGAAAGATGATCTTGGCCTGTATTTGCATGAACATCTTCCCAAAAGCAATGCACAATCACCTGGGCAGGTGGATAATCCCATCTCTCCCACTGATAAAATAAAGCCGAAACAGTACACATCGGAAGATATAACGCCACCGATTTTGAGTTGTGGCACTGGTCCCATTTATCTCACTGATAAAAGAAAGCTGAAACAGTACACATTGGAAGATATATCGCCACCGATTTTGGGTTTTGGCTCTGCTTCTAGCATAAAGGCGGAATTGAAGGCACGTATGCTGCAATCCACAATTTCAAACATGTTGAAAGCAAACGGTAATCCAATAGCTTCCCTTGATGCTGCAACCAGTGCTGCTTCTAGCATCAGGGCTGAATTGAAGGCACGTCTCCTGCAATCCTCAATCTCCAACACATTGAAAGGAAATGATAATCCAACAGGATCACTCAATGCTGCAACAGCCAATGGCAATGGTAGAAATCCTGCTTCTAGCATCGAGGTAGAGATGAAGGCACATGAATTCCAATCAACAATCCCAAATGAATATAAAGGCGTGTGCACTCCGCAACAGCCAATGGCAGCGGTAGAAACTCCTATTCTGCCTATAGAGGTGGCCTCTGATGTTTCATCTGTAACTTCAAGTGAATCATCCTCGGAATCTGATGATATAATACCAGATCTTGGCAAGCTTTCAGAAGCTAGTCATCAAGCAGAAAGTACGGCACCTCAGAACATTCATATTCTTAGTGATGACAGTGATGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006325 GO:0006355 GO:0006464 GO:0006479 GO:0006482 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008213 GO:0008214 GO:0008276 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0009987 GO:0010216 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016569 GO:0016570 GO:0016571 GO:0016577 GO:0016740 GO:0016741 GO:0019219 GO:0019222 GO:0019538 GO:0022414 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032259 GO:0032451 GO:0032452 GO:0032453 GO:0032501 GO:0032502 GO:0034641 GO:0034720 GO:0036211 GO:0042054 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043414 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0046483 GO:0048519 GO:0048523 GO:0048573 GO:0048579 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048586 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0070076 GO:0070988 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:0140096 GO:0140110 GO:1901360 GO:1901363 GO:1901564 GO:1902679 GO:1903506 GO:1903507 GO:1990837 GO:2000026 GO:2000028 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
JmjC JmjN zf-C5HC2

Protein Analysis

705

Amino Acids

78.2

Weight (kDa)

5.72

Isoelectric Point (pI)

49.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
JmjC PF02373 169 - 275 6.7e-32 JmjC domain, hydroxylase
zf-C5HC2 PF02928 385 - 435 2.9e-13 C5HC2 zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1411
AasI GACNNNNNNGTC 1 cut(s) 725
AatII GACGTC 1 cut(s) 210
Acc36I ACCTGC 1 cut(s) 1411
AccB1I GGYRCC 1 cut(s) 2074
AccB7I CCANNNNNTGG 1 cut(s) 2033
AccI GTMKAC 1 cut(s) 1209
AciI CCGC 4 cut(s) 619, 1613, 1916, 1934
AclWI GGATC 2 cut(s) 1040, 1801
AcsI RAATTY 8 cut(s) 140, 418, 625, 791, 963, 997, 1120, 1871
AcuI CTGAAG 2 cut(s) 309, 1089
AcyI GRCGYC 1 cut(s) 207
AfaI GTAC 3 cut(s) 1469, 1553, 2071
AfiI CCNNNNNNNGG 4 cut(s) 290, 1146, 1583, 2033
AflIII ACRYGT 2 cut(s) 476, 1653
AjiI CACGTC 1 cut(s) 1739
AjnI CCWGG 6 cut(s) 130, 442, 607, 748, 772, 1414
AloI GAACNNNNNNTCC 2 cut(s) 744, 776
Alw21I GWGCWC 4 cut(s) 23, 549, 586, 1913
Alw26I GTCTC 3 cut(s) 317, 1064, 1745
Alw44I GTGCAC 1 cut(s) 1909
AlwI GGATC 2 cut(s) 1040, 1801
AoxI GGCC 2 cut(s) 1369, 1965
ApaLI GTGCAC 1 cut(s) 1909
ApeKI GCWGC 8 cut(s) 635, 932, 1155, 1633, 1694, 1706, 1805, 1931
ApoI RAATTY 8 cut(s) 140, 418, 625, 791, 963, 997, 1120, 1871
ArsI GACNNNNNNTTYG 6 cut(s) 37, 50, 69, 82, 192, 224
Asp700I GAANNNNTTC 2 cut(s) 1074, 1389
AspS9I GGNCC 2 cut(s) 134, 1514
AsuHPI GGTGA 2 cut(s) 101, 1404
AsuII TTCGAA 1 cut(s) 1078
AvaII GGWCC 2 cut(s) 134, 1514
BaeGI GKGCMC 2 cut(s) 955, 1913
BaeI ACNNNNGTAYC 2 cut(s) 1207, 1240
BanI GGYRCC 1 cut(s) 2074
BauI CACGAG 1 cut(s) 501
BbsI GAAGAC 1 cut(s) 760
Bbv12I GWGCWC 4 cut(s) 23, 549, 586, 1913
BbvI GCAGC 8 cut(s) 647, 944, 1167, 1620, 1681, 1693, 1792, 1943
BccI CCATC 4 cut(s) 415, 1022, 1442, 2105
BceAI ACGGC 2 cut(s) 220, 2088
BciT130I CCWGG 6 cut(s) 132, 444, 609, 750, 774, 1416
BciVI GTATCC 1 cut(s) 703
BcoDI GTCTC 3 cut(s) 317, 1064, 1745
BfaI CTAG 7 cut(s) 525, 839, 936, 1602, 1713, 1842, 2052
BfmI CTRYAG 3 cut(s) 1185, 1206, 1956
BfuAI ACCTGC 1 cut(s) 1411
BfuI GTATCC 1 cut(s) 703
BglII AGATCT 1 cut(s) 2029
BisI GCNGC 8 cut(s) 636, 933, 1156, 1634, 1695, 1707, 1806, 1932
BlsI GCNGC 8 cut(s) 637, 934, 1157, 1635, 1696, 1708, 1807, 1933
Bme1390I CCNGG 6 cut(s) 132, 444, 609, 750, 774, 1416
Bme18I GGWCC 2 cut(s) 134, 1514
BmgBI CACGTC 1 cut(s) 1739
BmgT120I GGNCC 2 cut(s) 134, 1514
BmiI GGNNCC 4 cut(s) 129, 234, 1516, 2076
BmrFI CCNGG 6 cut(s) 132, 444, 609, 750, 774, 1416
BmsI GCATC 5 cut(s) 193, 1123, 1681, 1725, 1854
BoxI GACNNNNGTC 1 cut(s) 477
BpiI GAAGAC 1 cut(s) 760
BplI GAGNNNNNCTC 2 cut(s) 1952, 1984
BpmI CTGGAG 2 cut(s) 771, 795
Bpu14I TTCGAA 1 cut(s) 1078
BpuEI CTTGAG 3 cut(s) 64, 1034, 1046
BsaAI YACGTR 1 cut(s) 1628
BsaBI GATNNNNATC 2 cut(s) 70, 369
BsaHI GRCGYC 1 cut(s) 207
BsaJI CCNNGG 6 cut(s) 442, 607, 608, 772, 1415, 2004
BsaXI ACNNNNNCTCC 4 cut(s) 423, 453, 744, 774
Bsc4I CCNNNNNNNGG 4 cut(s) 290, 1146, 1583, 2033
Bse1I ACTGG 3 cut(s) 848, 1516, 1701
Bse3DI GCAATG 2 cut(s) 1408, 1828
Bse8I GATNNNNATC 2 cut(s) 70, 369
BseBI CCWGG 6 cut(s) 132, 444, 609, 750, 774, 1416
BseDI CCNNGG 6 cut(s) 442, 607, 608, 772, 1415, 2004
BseGI GGATG 4 cut(s) 10, 1033, 1122, 2000
BseJI GATNNNNATC 2 cut(s) 70, 369
BseLI CCNNNNNNNGG 4 cut(s) 290, 1146, 1583, 2033
BseMI GCAATG 2 cut(s) 1408, 1828
BseMII CTCAG 4 cut(s) 509, 807, 1005, 2093
BseNI ACTGG 3 cut(s) 848, 1516, 1701
BseRI GAGGAG 1 cut(s) 825
BseSI GKGCMC 2 cut(s) 955, 1913
BseXI GCAGC 8 cut(s) 647, 944, 1167, 1620, 1681, 1693, 1792, 1943
BsgI GTGCAG 1 cut(s) 1359
BshFI GGCC 2 cut(s) 1371, 1967
BshNI GGYRCC 1 cut(s) 2074
BsiHKAI GWGCWC 4 cut(s) 23, 549, 586, 1913
BslFI GGGAC 2 cut(s) 590, 1500
BslI CCNNNNNNNGG 4 cut(s) 290, 1146, 1583, 2033
BsmAI GTCTC 3 cut(s) 317, 1064, 1745
BsmBI CGTCTC 2 cut(s) 1064, 1745
BsmFI GGGAC 2 cut(s) 590, 1500
BsmI GAATGC 3 cut(s) 738, 868, 1157
BsnI GGCC 2 cut(s) 1371, 1967
Bsp119I TTCGAA 1 cut(s) 1078
Bsp1286I GDGCHC 5 cut(s) 23, 549, 586, 955, 1913
Bsp143I GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
BspACI CCGC 4 cut(s) 619, 1613, 1916, 1934
BspANI GGCC 2 cut(s) 1371, 1967
BspCNI CTCAG 4 cut(s) 508, 808, 1004, 2092
BspHI TCATGA 1 cut(s) 1285
BspLI GGNNCC 4 cut(s) 129, 234, 1516, 2076
BspMAI CTGCAG 1 cut(s) 1189
BspMI ACCTGC 1 cut(s) 1411
BspPI GGATC 2 cut(s) 1040, 1801
BspQI GCTCTTC 1 cut(s) 537
BspT104I TTCGAA 1 cut(s) 1078
BspT107I GGYRCC 1 cut(s) 2074
BsrDI GCAATG 2 cut(s) 1408, 1828
BsrI ACTGG 3 cut(s) 848, 1516, 1701
BssECI CCNNGG 6 cut(s) 442, 607, 608, 772, 1415, 2004
BssMI GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
BssNI GRCGYC 1 cut(s) 207
BssSI CACGAG 1 cut(s) 501
Bst2BI CACGAG 1 cut(s) 501
Bst2UI CCWGG 6 cut(s) 132, 444, 609, 750, 774, 1416
Bst6I CTCTTC 4 cut(s) 26, 456, 537, 1065
BstACI GRCGYC 1 cut(s) 207
BstAPI GCANNNNNTGC 2 cut(s) 830, 1703
BstBAI YACGTR 1 cut(s) 1628
BstBI TTCGAA 1 cut(s) 1078
BstC8I GCNNGC 4 cut(s) 404, 1018, 1298, 2039
BstDEI CTNAG 5 cut(s) 495, 816, 991, 2079, 2096
BstF5I GGATG 4 cut(s) 10, 1033, 1122, 2000
BstKTI GATC 5 cut(s) 1035, 1174, 1366, 1796, 2032
BstMAI GTCTC 3 cut(s) 317, 1064, 1745
BstMBI GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
BstMWI GCNNNNNNNGC 7 cut(s) 232, 685, 830, 941, 950, 1703, 1811
BstNI CCWGG 6 cut(s) 132, 444, 609, 750, 774, 1416
BstNSI RCATGY 3 cut(s) 480, 828, 1657
BstPAI GACNNNNGTC 1 cut(s) 477
BstSCI CCNGG 6 cut(s) 130, 442, 607, 748, 772, 1414
BstSFI CTRYAG 3 cut(s) 1185, 1206, 1956
BstSLI GKGCMC 2 cut(s) 955, 1913
BstV1I GCAGC 8 cut(s) 647, 944, 1167, 1620, 1681, 1693, 1792, 1943
BstV2I GAAGAC 1 cut(s) 760
BstX2I RGATCY 2 cut(s) 1032, 2029
BstXI CCANNNNNNTGG 2 cut(s) 376, 414
BstYI RGATCY 2 cut(s) 1032, 2029
BsuI GTATCC 1 cut(s) 703
BsuRI GGCC 2 cut(s) 1371, 1967
BtrI CACGTC 1 cut(s) 1739
BtsCI GGATG 4 cut(s) 10, 1033, 1122, 2000
BtsI GCAGTG 2 cut(s) 233, 346
BveI ACCTGC 1 cut(s) 1411
Cac8I GCNNGC 4 cut(s) 404, 1018, 1298, 2039
CciI TCATGA 1 cut(s) 1285
Cfr13I GGNCC 2 cut(s) 134, 1514
CseI GACGC 2 cut(s) 734, 1046
CsiI ACCWGGT 1 cut(s) 130
Csp6I GTAC 3 cut(s) 1468, 1552, 2070
CspCI CAANNNNNGTGG 6 cut(s) 209, 244, 1479, 1514, 1563, 1598
CviQI GTAC 3 cut(s) 1468, 1552, 2070
DdeI CTNAG 5 cut(s) 495, 816, 991, 2079, 2096
DpnI GATC 5 cut(s) 1034, 1173, 1365, 1795, 2031
DpnII GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
DraI TTTAAA 1 cut(s) 423
DrdI GACNNNNNNGTC 1 cut(s) 725
DseDI GACNNNNNNGTC 1 cut(s) 725
Eam1104I CTCTTC 4 cut(s) 26, 456, 537, 1065
EarI CTCTTC 4 cut(s) 26, 456, 537, 1065
EciI GGCGGA 1 cut(s) 1628
Eco47I GGWCC 2 cut(s) 134, 1514
Eco57I CTGAAG 2 cut(s) 309, 1089
EcoRI GAATTC 4 cut(s) 140, 791, 1120, 1871
EcoRII CCWGG 6 cut(s) 130, 442, 607, 748, 772, 1414
Esp3I CGTCTC 2 cut(s) 1064, 1745
FalI AAGNNNNNCTT 2 cut(s) 1350, 1382
FaqI GGGAC 2 cut(s) 590, 1500
FauI CCCGC 1 cut(s) 626
FblI GTMKAC 1 cut(s) 1209
Fnu4HI GCNGC 8 cut(s) 636, 933, 1156, 1634, 1695, 1707, 1806, 1932
FokI GGATG 4 cut(s) 17, 1040, 1129, 1987
Fsp4HI GCNGC 8 cut(s) 636, 933, 1156, 1634, 1695, 1707, 1806, 1932
FspBI CTAG 7 cut(s) 525, 839, 936, 1602, 1713, 1842, 2052
GluI GCNGC 8 cut(s) 636, 933, 1156, 1634, 1695, 1707, 1806, 1932
GsuI CTGGAG 2 cut(s) 771, 795
HaeIII GGCC 2 cut(s) 1371, 1967
HgaI GACGC 2 cut(s) 734, 1046
Hin1I GRCGYC 1 cut(s) 207
HindIII AAGCTT 2 cut(s) 1317, 2039
HphI GGTGA 2 cut(s) 101, 1404
Hpy166II GTNNAC 4 cut(s) 1210, 1470, 1554, 1911
Hpy188III TCNNGA 8 cut(s) 43, 63, 137, 149, 221, 656, 839, 1286
Hpy8I GTNNAC 4 cut(s) 1210, 1470, 1554, 1911
HpyAV CCTTC 6 cut(s) 284, 1074, 1319, 1615, 1726, 1855
HpyCH4IV ACGT 4 cut(s) 207, 268, 1627, 1738
HpyF10VI GCNNNNNNNGC 7 cut(s) 232, 685, 830, 941, 950, 1703, 1811
HpyF3I CTNAG 5 cut(s) 495, 816, 991, 2079, 2096
HpySE526I ACGT 4 cut(s) 207, 268, 1627, 1738
Hsp92I GRCGYC 1 cut(s) 207
Kzo9I GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
LguI GCTCTTC 1 cut(s) 537
LmnI GCTCC 5 cut(s) 232, 589, 776, 838, 929
Lsp1109I GCAGC 8 cut(s) 647, 944, 1167, 1620, 1681, 1693, 1792, 1943
LweI GCATC 5 cut(s) 193, 1123, 1681, 1725, 1854
MabI ACCWGGT 1 cut(s) 130
MaeI CTAG 7 cut(s) 525, 839, 936, 1602, 1713, 1842, 2052
MaeII ACGT 4 cut(s) 207, 268, 1627, 1738
MaeIII GTNAC 5 cut(s) 203, 566, 1107, 1262, 1984
MalI GATC 5 cut(s) 1034, 1173, 1365, 1795, 2031
MboI GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
MfeI CAATTG 1 cut(s) 112
MflI RGATCY 2 cut(s) 1032, 2029
MhlI GDGCHC 5 cut(s) 23, 549, 586, 955, 1913
MlyI GAGTC 3 cut(s) 53, 432, 493
MmeI TCCRAC 3 cut(s) 374, 1785, 1811
MroXI GAANNNNTTC 2 cut(s) 1074, 1389
MseI TTAA 9 cut(s) 159, 422, 665, 684, 807, 1022, 1037, 1334, 2116
MslI CAYNNNNRTG 1 cut(s) 579
MspA1I CMGCKG 1 cut(s) 1934
MspR9I CCNGG 6 cut(s) 132, 444, 609, 750, 774, 1416
MunI CAATTG 1 cut(s) 112
Mva1269I GAATGC 3 cut(s) 738, 868, 1157
MvaI CCWGG 6 cut(s) 132, 444, 609, 750, 774, 1416
MwoI GCNNNNNNNGC 7 cut(s) 232, 685, 830, 941, 950, 1703, 1811
NdeII GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
NlaIV GGNNCC 4 cut(s) 129, 234, 1516, 2076
NmuCI GTSAC 2 cut(s) 203, 1107
NspI RCATGY 3 cut(s) 480, 828, 1657
NspV TTCGAA 1 cut(s) 1078
PagI TCATGA 1 cut(s) 1285
PaqCI CACCTGC 1 cut(s) 1411
PasI CCCWGGG 1 cut(s) 608
PciI ACATGT 2 cut(s) 476, 1653
PciSI GCTCTTC 1 cut(s) 537
PctI GAATGC 3 cut(s) 738, 868, 1157
PdmI GAANNNNTTC 2 cut(s) 1074, 1389
PfeI GAWTC 8 cut(s) 39, 71, 122, 294, 365, 1075, 1997, 2009
PflMI CCANNNNNTGG 1 cut(s) 2033
PfoI TCCNGGA 1 cut(s) 748
PkrI GCNGC 8 cut(s) 637, 934, 1157, 1635, 1696, 1708, 1807, 1933
PleI GAGTC 3 cut(s) 53, 432, 493
PpsI GAGTC 3 cut(s) 53, 432, 493
Ppu21I YACGTR 1 cut(s) 1628
PscI ACATGT 2 cut(s) 476, 1653
PshAI GACNNNNGTC 1 cut(s) 477
Psp6I CCWGG 6 cut(s) 130, 442, 607, 748, 772, 1414
PspGI CCWGG 6 cut(s) 130, 442, 607, 748, 772, 1414
PspN4I GGNNCC 4 cut(s) 129, 234, 1516, 2076
PspPI GGNCC 2 cut(s) 134, 1514
PstI CTGCAG 1 cut(s) 1189
PsuI RGATCY 2 cut(s) 1032, 2029
RsaI GTAC 3 cut(s) 1469, 1553, 2071
RsaNI GTAC 3 cut(s) 1468, 1552, 2070
RseI CAYNNNNRTG 1 cut(s) 579
SapI GCTCTTC 1 cut(s) 537
SaqAI TTAA 9 cut(s) 159, 422, 665, 684, 807, 1022, 1037, 1334, 2116
SatI GCNGC 8 cut(s) 636, 933, 1156, 1634, 1695, 1707, 1806, 1932
Sau3AI GATC 5 cut(s) 1032, 1171, 1363, 1793, 2029
Sau96I GGNCC 2 cut(s) 134, 1514
SchI GAGTC 3 cut(s) 53, 432, 493
ScrFI CCNGG 6 cut(s) 132, 444, 609, 750, 774, 1416
SduI GDGCHC 5 cut(s) 23, 549, 586, 955, 1913
SexAI ACCWGGT 1 cut(s) 130
SfaNI GCATC 5 cut(s) 193, 1123, 1681, 1725, 1854
SfcI CTRYAG 3 cut(s) 1185, 1206, 1956
SfuI TTCGAA 1 cut(s) 1078
SinI GGWCC 2 cut(s) 134, 1514
SmiI ATTTAAAT 1 cut(s) 423
SmiMI CAYNNNNRTG 1 cut(s) 579
SmlI CTYRAG 3 cut(s) 79, 1049, 1061
SmoI CTYRAG 3 cut(s) 79, 1049, 1061
SsiI CCGC 4 cut(s) 619, 1613, 1916, 1934
SspI AATATT 2 cut(s) 250, 1088
SspMI CTAG 7 cut(s) 525, 839, 936, 1602, 1713, 1842, 2052
StyD4I CCNGG 6 cut(s) 130, 442, 607, 748, 772, 1414
SwaI ATTTAAAT 1 cut(s) 423
TaiI ACGT 4 cut(s) 210, 271, 1630, 1741
TaqI TCGA 5 cut(s) 44, 297, 795, 1078, 1848
TatI WGTACW 2 cut(s) 1467, 1551
TfiI GAWTC 8 cut(s) 39, 71, 122, 294, 365, 1075, 1997, 2009
Tru1I TTAA 9 cut(s) 159, 422, 665, 684, 807, 1022, 1037, 1334, 2116
Tru9I TTAA 9 cut(s) 159, 422, 665, 684, 807, 1022, 1037, 1334, 2116
TseFI GTSAC 2 cut(s) 203, 1107
TseI GCWGC 8 cut(s) 635, 932, 1155, 1633, 1694, 1706, 1805, 1931
Tsp45I GTSAC 2 cut(s) 203, 1107
Van91I CCANNNNNTGG 1 cut(s) 2033
VneI GTGCAC 1 cut(s) 1909
VpaK11BI GGWCC 2 cut(s) 134, 1514
XapI RAATTY 8 cut(s) 140, 418, 625, 791, 963, 997, 1120, 1871
XbaI TCTAGA 1 cut(s) 838
XceI RCATGY 3 cut(s) 480, 828, 1657
XmiI GTMKAC 1 cut(s) 1209
XmnI GAANNNNTTC 2 cut(s) 1074, 1389
XspI CTAG 7 cut(s) 525, 839, 936, 1602, 1713, 1842, 2052
ZraI GACGTC 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.