MD11G1085800.v1.1

disease resistance

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Forward (+)
7235933 .. 7239883
3951 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1085800.v1.1.491

Sequence Viewer

Length: 3690 bp
ATGGCATACATGAATGAGGTGATAGAGGGTTTGAAGAGGGAACGAGTACGAATGATCGGGATTTGTGGAATGGGGGGTGTGGGTAAAACCACAATGGTGAAAGAAATCATCGAAAGATTGGCAAAACTAGACTTGTTTGATAAAATTGTAATGGCAACTGTGTCTCAAAGTCCAAGTATTAGGATGATCCAGTCGGAAATTGCAGACAAAATAGGTTTGAAATTTGAGGAGGAATCCGAGCCCGGAAGAGCACTAAAGCTACGTGGGAGACTCATGGAAATAAAGAGGATCCTGATTGTATTAGATGATGTCTGGACAGAGCCTGATTTTGAGGCTATAGGACTCCCTTGTGGAGATGATCATGAAGGGTGCAAAGTTTTGTTGACATCACGAGATTCGGAAGTCTGCAACAGGATGGGAAGTCAACAAATTATTGCTGTCCCGATTTTAACAACAGAAGAATCACAGGAGCTCTTTAGAGAAATGGTAGGTGAATCCTTCGATGAGCCTGATTTACGTTCCATTACAAAAGAGGTCGTGCATGAATGTGGAGGTTTACCTATTGCAATTGTAACTGTTGGAAAAGCCCTAGAAAAGAAAAACAAGCGTGAATGGGATGATGCCCTTAATCAGCTGCGAAATTCTACCCCAGTGAACATCCCTGGAGTGAATGACAAAGTTTATTCTTGCATAAAATGGAGTTATGATAGATTGGACAGTGATGAAGCCAGATCATGTCTTTTACTTTGTTGTTTATTTCCAGAAGATCATGATATTTCAATTGAGTATTTGGTTCGATATGGGTGGGGTCGAGGATATTTTAGCAACAGCTTTACTTTGGAAGATGCAAGAAATAGAGTGCATTCTTTGGTTGACCAACTAAAAAGAAGGTTTTTGTTGCTAGATAGTGGCGAGGATAAGTTTACCAAAAAGGTTGACATGGTTCAGTTTACAAAAATGCATGACATTGTTCGCGATGTTGCCATATCAATTGCTTCAAGAGATCCACATCGATTTCTGGTAAGATGTCATGCTGAAAATAAGGGGTGGCCGAATTTAGCTACATATGACAATTACACTACAATCTCACTTGTTGGCGAATTGGAGATTCCCGTTGGTTTGAAATGCCCAAAACTTGAGCTTCTACAGACGATAAAAGGAAGTTTTTCAGAAGATGGCATGGACATCATTTGTGATGCGATGAAAGAACTGAAGGTTTTAGCTTTGGTGGAAATGGAAGGCCTAGACTCATTAAGTTCACTAGGAGTACCGAAGAACCTGCGGACATTGTGCTTAGATGGGTCTAAATTTGATGGCATGTATACTGATGTTATTGGGAGTTTGGAGAATTTAGAAATCCTCAGCTTTCGGGATTGTCGTTCCATGCATGAGTTGCCGAGGGAAATTGGTCGACTTAAACAGTTAAGGTTGTTAGATACGACAAACTGCAGGAAACTTAAGGTGATTCCACATGGTATCTTCTCCAGCTTATGTAGACTTGAAGAGTTGTATATGCTTGATAGCTTTGGTGAATGGGAAATTGGAACAGGAAGAGAAGAGAAGGGGATGGCAAGCATTTCTGAGGTGATGTCTCTGTCTGATCATTTGAAGGTTCTAGCCATAGAGATACCCAGTGTCATCCACTTGTTGCCAAAAGACATAGTCTTGAAAAGCCCAACAATAAAATTCTATATACACTTAGGATGTGACAATGTAGTTCCTGAGAAGATGACACTGGAAAATTGTTTGGCGATTTATGGAAGTGATGCAATGGAGTTGAAGGAGAGTCAAGCAGTTAGACTTCTGTTGAAAAAATCTAAAATTTTGATTTTGGACAGTGTTAAGAATTTCTCTGTCCTCATTGATTCAGACCAAGATGGATTTCAAGATTTGAAACTTTTGCATCTTAATAATTGTCCAAATACCAAGTATCTTGCAAATAGAACAAGTGCGACCCAGCAGACACTCTTTCCTCGCATACAGTCAGTTAGTCAGTTCCCGGATAACTTTTTGTCCAACCTAAGATTCCTTTATTTGGGAAATTGTGATGTCTTAAAATATGTCTTTTCACTATCAATAGCGAGAAACTTGGTACAACTCAAGGAATTAAGTATTGATGAATGTGATGAAATGGAAGAAATTGTGTCGAAGCAGGGGAGGGAACATGAGGAGGAAGCCAATATGATATCTTTCCATAATTTAACCAATTTGACTCTTAAGGGTCTAGAGAGTTTGGTCGGTTTCTTCCGAGCCAACACGCTATGCTCCAACCCAAAGGAAACAACGCCAAGGCTTGGGCATCAATCTGCAGGAATATTTGAAAAAGCAATATTTCCATCAAAGTGCATTTCATGGTTCCCAAGTTTGGAAAAGGTAAAATTGGAGGATATGAAGTTTGACGGCGTGCTATTTGATCTGAAAATCCATATAGTTATGGATGGGCAGACAACTCCAACATTTCCCCATTTACGTAAGTTGAAGATACTCAATTGTACGTATACACACTTGTGGAAAAACATTCCGTCTAGATTTCAAGGCTTCCAAAATTTGAGACATTTGGGATTGAGAAAATGTTCTGGTCTAAAATATGTGTTCTCGCATTTAATTGCCCGAGAACTTTTGAATCTTGAAGAGATAGAGATATCAACATGTCCGGACATGGAAACTATAGTCAGAATCCCAAAGGAAAATGAAGATGAGGCAACAAAAGACATGATTTTGTTTCCGAAACTGTCCACATTTGAACTAGTAGACCTGCCTCTTCTCACAAGTCTTTGTTCCGAAGGATCTACATTTCTATGGTCATCCACAAAAAATATGCACGTGGAAAAATGTGAAAAATTGAAGACATTGTGTGCTGTAATTCCACAAAGAAAGAAGTTGGAGAATAAGTCTGAGAAGGATTCAACAAGTCACGATTTCAGCACTTCTCCATCAAATTGGTGTCCTGCTGGATGTGGATGCACACCATATTCAAGACCAAACGCCCACCGCTCCATTGAAATATTGCCACGTCCAATTAATCTGGAGGTTACACCAACCAATCTTGAGGACTCAAATGATTATGATAATCTCGAAATTCTTACTGTACGTGATTGTAATTCAATGGAAGTGATTTTCCACCTAAAGGGACCGAAGCATGATAAAAGTAGTCACTCCTTTGAAGGATTCAATAAATTGAGGTCCTTGTGGTTATATAAGTTGCCAAGTTTAACACGTGTTTGGGAAACGGGTAGTTCACAACAGATGTTCACAGGAAGCAGCTTCGGAAACTTGAAATCATTGAAGGTCAATTGTTGCAACCAGTTGAAATACTTGTTTTCTTCGTCCATAGTCAAACTTCTTGTGAGTGTAGAGGACATAAAAGTTGAGAAGTGTGAGCAGATGGAAGAAATCGTTGCCGCAGAAGAAGAAACAGCTGAAATAATTACATTACCTAAAGTGAAGTCCATCAAGCTTAAAAGGCTGCCAAAACTCAAGTATTTTTGTGGTGAAGCTTATACTTTGAAGTTGCCGTCTTTGGAGTTATTGAAGGTTATTAAGGTCCAAAACTTAAAGCTATTTGCTCCTAAGCTTGTTGACACACATCCCCGATTGCAAGTACGCACCGCGTTGGGAGTAGCTGAATGGATGGAGGACCTCAATGCCACTTTAAGGAACAGTTACGTTCTGGTTGATAATTTACAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1230

Amino Acids

139.64

Weight (kDa)

6.05

Isoelectric Point (pI)

43.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 4 - 165 1.2e-34 NB-ARC domain
LRR_14 PF23598 401 - 508 2.4e-08 Leucine-rich repeat region
LRR_RPS2 PF23247 662 - 746 6.1e-11 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 774 - 884 6.1e-16 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 873 - 951 1.3e-06 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1022 - 1127 1.5e-21 Plant disease resistance protein RPS2-like, leucine-rich repeats
LRR_RPS2 PF23247 1082 - 1186 1.9e-13 Plant disease resistance protein RPS2-like, leucine-rich repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1287, 2763
AccB7I CCANNNNNTGG 1 cut(s) 2294
AccBSI CCGCTC 1 cut(s) 2994
AccI GTMKAC 5 cut(s) 1322, 1411, 1495, 2498, 2751
AccII CGCG 2 cut(s) 975, 3611
AccIII TCCGGA 1 cut(s) 2653
AciI CCGC 4 cut(s) 1282, 2992, 3402, 3609
AclWI GGATC 5 cut(s) 181, 283, 296, 998, 2794
AcoI YGGCCR 1 cut(s) 1049
AcuI CTGAAG 1 cut(s) 1232
AcvI CACGTG 2 cut(s) 2824, 3218
AfaI GTAC 6 cut(s) 48, 1269, 2094, 2494, 3090, 3603
AfiI CCNNNNNNNGG 5 cut(s) 2035, 2294, 2365, 3127, 3654
AflII CTTAAG 2 cut(s) 1457, 2216
AflIII ACRYGT 3 cut(s) 2648, 3215, 3217
AhlI ACTAGT 1 cut(s) 2746
AjiI CACGTC 1 cut(s) 3014
AjnI CCWGG 1 cut(s) 661
AjuI GAANNNNNNNTTGG 6 cut(s) 1524, 1556, 1866, 1898, 2009, 2041
AleI CACNNNNGTG 2 cut(s) 95, 2506
Alw21I GWGCWC 2 cut(s) 253, 474
Alw26I GTCTC 4 cut(s) 168, 262, 1596, 2545
AlwI GGATC 5 cut(s) 181, 283, 296, 998, 2794
AlwNI CAGNNNCTG 1 cut(s) 323
Ama87I CYCGRG 1 cut(s) 2610
Aor13HI TCCGGA 1 cut(s) 2653
AoxI GGCC 2 cut(s) 1049, 1240
ApeKI GCWGC 3 cut(s) 634, 3261, 3466
AseI ATTAAT 1 cut(s) 3021
Asp700I GAANNNNTTC 2 cut(s) 1165, 2572
AspS9I GGNCC 4 cut(s) 3131, 3183, 3544, 3637
AsuC2I CCSGG 2 cut(s) 243, 2000
AsuHPI GGTGA 7 cut(s) 31, 109, 503, 1474, 1541, 1597, 3503
AvaI CYCGRG 1 cut(s) 2610
AvaII GGWCC 4 cut(s) 3131, 3183, 3544, 3637
BamHI GGATCC 1 cut(s) 288
BanII GRGCYC 2 cut(s) 243, 474
BauI CACGAG 1 cut(s) 390
BbrPI CACGTG 2 cut(s) 2824, 3218
BbsI GAAGAC 1 cut(s) 2852
Bbv12I GWGCWC 2 cut(s) 253, 474
BbvCI CCTCAGC 1 cut(s) 1361
BbvI GCAGC 3 cut(s) 621, 3273, 3453
BceAI ACGGC 2 cut(s) 2416, 3499
BcgI CGANNNNNNTGC 2 cut(s) 1261, 1295
BciT130I CCWGG 1 cut(s) 663
BclI TGATCA 2 cut(s) 358, 1600
BcnI CCSGG 2 cut(s) 243, 2000
BcoDI GTCTC 4 cut(s) 168, 262, 1596, 2545
BcuI ACTAGT 1 cut(s) 2746
BfaI CTAG 9 cut(s) 128, 590, 902, 1244, 1262, 1616, 2225, 2526, 2747
BfmI CTRYAG 5 cut(s) 336, 1145, 1447, 2307, 2667
BfrI CTTAAG 2 cut(s) 1457, 2216
BfuAI ACCTGC 2 cut(s) 1287, 2763
BisI GCNGC 4 cut(s) 635, 3262, 3402, 3467
BlsI GCNGC 4 cut(s) 636, 3263, 3403, 3468
Bme1390I CCNGG 3 cut(s) 243, 663, 2000
Bme18I GGWCC 4 cut(s) 3131, 3183, 3544, 3637
BmeT110I CYCGRG 1 cut(s) 2610
BmgBI CACGTC 1 cut(s) 3014
BmgT120I GGNCC 4 cut(s) 3131, 3183, 3544, 3637
BmiI GGNNCC 3 cut(s) 290, 2357, 3132
BmrFI CCNGG 3 cut(s) 243, 663, 2000
BmrI ACTGGG 2 cut(s) 644, 1626
BmsI GCATC 7 cut(s) 610, 835, 1186, 1756, 1912, 2308, 2951
BmuI ACTGGG 2 cut(s) 644, 1626
BpiI GAAGAC 1 cut(s) 2852
BpmI CTGGAG 3 cut(s) 684, 1468, 3047
Bpu10I CCTNAGC 2 cut(s) 1361, 3570
BpuEI CTTGAG 4 cut(s) 1157, 2084, 3068, 3461
BpuMI CCSGG 2 cut(s) 243, 2000
Bsa29I ATCGAT 1 cut(s) 1012
BsaAI YACGTR 6 cut(s) 263, 2471, 2496, 2824, 3092, 3218
BsaBI GATNNNNATC 1 cut(s) 1008
BsaJI CCNNGG 3 cut(s) 661, 1397, 2288
BsaWI WCCGGW 1 cut(s) 2653
BsaXI ACNNNNNCTCC 2 cut(s) 2876, 2906
Bsc4I CCNNNNNNNGG 5 cut(s) 2035, 2294, 2365, 3127, 3654
Bse1I ACTGG 5 cut(s) 190, 650, 1632, 1740, 3304
Bse3DI GCAATG 1 cut(s) 1776
Bse8I GATNNNNATC 1 cut(s) 1008
BseAI TCCGGA 1 cut(s) 2653
BseBI CCWGG 1 cut(s) 663
BseCI ATCGAT 1 cut(s) 1012
BseDI CCNNGG 3 cut(s) 661, 1397, 2288
BseJI GATNNNNATC 1 cut(s) 1008
BseLI CCNNNNNNNGG 5 cut(s) 2035, 2294, 2365, 3127, 3654
BseMI GCAATG 1 cut(s) 1776
BseMII CTCAG 4 cut(s) 1375, 1572, 1713, 2886
BseNI ACTGG 5 cut(s) 190, 650, 1632, 1740, 3304
BseRI GAGGAG 2 cut(s) 242, 2183
BseXI GCAGC 3 cut(s) 621, 3273, 3453
BseYI CCCAGC 1 cut(s) 1956
Bsh1236I CGCG 2 cut(s) 975, 3611
BshFI GGCC 2 cut(s) 1051, 1242
BshVI ATCGAT 1 cut(s) 1012
BsiHKAI GWGCWC 2 cut(s) 253, 474
BsiHKCI CYCGRG 1 cut(s) 2610
BsiSI CCGG 3 cut(s) 243, 2000, 2654
BslFI GGGAC 2 cut(s) 425, 3144
BslI CCNNNNNNNGG 5 cut(s) 2035, 2294, 2365, 3127, 3654
BsmAI GTCTC 4 cut(s) 168, 262, 1596, 2545
BsmFI GGGAC 2 cut(s) 425, 3144
BsmI GAATGC 1 cut(s) 862
BsnI GGCC 2 cut(s) 1051, 1242
BsoBI CYCGRG 1 cut(s) 2610
Bsp1286I GDGCHC 3 cut(s) 243, 253, 474
Bsp13I TCCGGA 1 cut(s) 2653
Bsp68I TCGCGA 1 cut(s) 975
BspACI CCGC 4 cut(s) 1282, 2992, 3402, 3609
BspANI GGCC 2 cut(s) 1051, 1242
BspCNI CTCAG 4 cut(s) 1374, 1573, 1714, 2887
BspDI ATCGAT 1 cut(s) 1012
BspEI TCCGGA 1 cut(s) 2653
BspFNI CGCG 2 cut(s) 975, 3611
BspHI TCATGA 2 cut(s) 361, 769
BspLI GGNNCC 3 cut(s) 290, 2357, 3132
BspMAI CTGCAG 2 cut(s) 1451, 2311
BspMI ACCTGC 2 cut(s) 1287, 2763
BspPI GGATC 5 cut(s) 181, 283, 296, 998, 2794
BspQI GCTCTTC 1 cut(s) 241
BspTI CTTAAG 2 cut(s) 1457, 2216
BsrBI CCGCTC 1 cut(s) 2994
BsrDI GCAATG 1 cut(s) 1776
BsrI ACTGG 5 cut(s) 190, 650, 1632, 1740, 3304
BssECI CCNNGG 3 cut(s) 661, 1397, 2288
BssNAI GTATAC 2 cut(s) 1323, 2499
BssSI CACGAG 1 cut(s) 390
BssT1I CCWWGG 1 cut(s) 2288
Bst1107I GTATAC 2 cut(s) 1323, 2499
Bst2BI CACGAG 1 cut(s) 390
Bst2UI CCWGG 1 cut(s) 663
Bst6I CTCTTC 7 cut(s) 29, 241, 1497, 1546, 1551, 2625, 2766
BstAFI CTTAAG 2 cut(s) 1457, 2216
BstAPI GCANNNNNTGC 1 cut(s) 1393
BstBAI YACGTR 6 cut(s) 263, 2471, 2496, 2824, 3092, 3218
BstC8I GCNNGC 2 cut(s) 1573, 2405
BstDEI CTNAG 8 cut(s) 1294, 1361, 1581, 1699, 1722, 2021, 2895, 3570
BstFNI CGCG 2 cut(s) 975, 3611
BstMAI GTCTC 4 cut(s) 168, 262, 1596, 2545
BstMWI GCNNNNNNNGC 2 cut(s) 1393, 3463
BstNI CCWGG 1 cut(s) 663
BstNSI RCATGY 2 cut(s) 1321, 2652
BstSCI CCNGG 3 cut(s) 241, 661, 1998
BstSFI CTRYAG 5 cut(s) 336, 1145, 1447, 2307, 2667
BstSNI TACGTA 2 cut(s) 2471, 2496
BstUI CGCG 2 cut(s) 975, 3611
BstV1I GCAGC 3 cut(s) 621, 3273, 3453
BstV2I GAAGAC 1 cut(s) 2852
BstX2I RGATCY 3 cut(s) 288, 1003, 2786
BstXI CCANNNNNNTGG 1 cut(s) 2940
BstYI RGATCY 3 cut(s) 288, 1003, 2786
BstZ17I GTATAC 2 cut(s) 1323, 2499
Bsu15I ATCGAT 1 cut(s) 1012
BsuRI GGCC 2 cut(s) 1051, 1242
BsuTUI ATCGAT 1 cut(s) 1012
BtgZI GCGATG 2 cut(s) 990, 1214
BtrI CACGTC 1 cut(s) 3014
BtsIMutI CAGTG 5 cut(s) 657, 724, 1639, 1733, 1843
BtuMI TCGCGA 1 cut(s) 975
BveI ACCTGC 2 cut(s) 1287, 2763
Cac8I GCNNGC 2 cut(s) 1573, 2405
CaiI CAGNNNCTG 1 cut(s) 323
CciI TCATGA 2 cut(s) 361, 769
Cfr13I GGNCC 4 cut(s) 3131, 3183, 3544, 3637
ClaI ATCGAT 1 cut(s) 1012
Csp6I GTAC 6 cut(s) 47, 1268, 2093, 2493, 3089, 3602
CviQI GTAC 6 cut(s) 47, 1268, 2093, 2493, 3089, 3602
DdeI CTNAG 8 cut(s) 1294, 1361, 1581, 1699, 1722, 2021, 2895, 3570
EaeI YGGCCR 1 cut(s) 1049
Eam1104I CTCTTC 7 cut(s) 29, 241, 1497, 1546, 1551, 2625, 2766
EarI CTCTTC 7 cut(s) 29, 241, 1497, 1546, 1551, 2625, 2766
Ecl136II GAGCTC 1 cut(s) 472
Eco105I TACGTA 2 cut(s) 2471, 2496
Eco130I CCWWGG 1 cut(s) 2288
Eco147I AGGCCT 1 cut(s) 1242
Eco24I GRGCYC 2 cut(s) 243, 474
Eco32I GATATC 2 cut(s) 2187, 2643
Eco47I GGWCC 4 cut(s) 3131, 3183, 3544, 3637
Eco53kI GAGCTC 1 cut(s) 472
Eco57I CTGAAG 1 cut(s) 1232
Eco72I CACGTG 2 cut(s) 2824, 3218
Eco88I CYCGRG 1 cut(s) 2610
EcoICRI GAGCTC 1 cut(s) 472
EcoO109I RGGNCCY 2 cut(s) 3183, 3637
EcoRII CCWGG 1 cut(s) 661
EcoRV GATATC 2 cut(s) 2187, 2643
EcoT14I CCWWGG 1 cut(s) 2288
EcoT22I ATGCAT 2 cut(s) 963, 1389
EcoT38I GRGCYC 2 cut(s) 243, 474
ErhI CCWWGG 1 cut(s) 2288
FaqI GGGAC 2 cut(s) 425, 3144
FauNDI CATATG 1 cut(s) 1066
FbaI TGATCA 2 cut(s) 358, 1600
FblI GTMKAC 5 cut(s) 1322, 1411, 1495, 2498, 2751
Fnu4HI GCNGC 4 cut(s) 635, 3262, 3402, 3467
FriOI GRGCYC 2 cut(s) 243, 474
Fsp4HI GCNGC 4 cut(s) 635, 3262, 3402, 3467
FspBI CTAG 9 cut(s) 128, 590, 902, 1244, 1262, 1616, 2225, 2526, 2747
GluI GCNGC 4 cut(s) 635, 3262, 3402, 3467
GsaI CCCAGC 1 cut(s) 1960
GsuI CTGGAG 3 cut(s) 684, 1468, 3047
HaeIII GGCC 2 cut(s) 1051, 1242
HapII CCGG 3 cut(s) 243, 2000, 2654
HincII GTYRAC 6 cut(s) 384, 425, 874, 937, 1412, 3580
HindII GTYRAC 6 cut(s) 384, 425, 874, 937, 1412, 3580
HindIII AAGCTT 3 cut(s) 3455, 3495, 3572
HpaII CCGG 3 cut(s) 243, 2000, 2654
HphI GGTGA 7 cut(s) 31, 109, 503, 1474, 1541, 1597, 3503
HpyCH4IV ACGT 9 cut(s) 262, 517, 2470, 2495, 2823, 3013, 3091, 3217, 3666
HpyF10VI GCNNNNNNNGC 2 cut(s) 1393, 3463
HpyF3I CTNAG 8 cut(s) 1294, 1361, 1581, 1699, 1722, 2021, 2895, 3570
HpySE526I ACGT 9 cut(s) 262, 517, 2470, 2495, 2823, 3013, 3091, 3217, 3666
Kpn2I TCCGGA 1 cut(s) 2653
Ksp22I TGATCA 2 cut(s) 358, 1600
LguI GCTCTTC 1 cut(s) 241
LmnI GCTCC 4 cut(s) 469, 2270, 2999, 3571
Lsp1109I GCAGC 3 cut(s) 621, 3273, 3453
LweI GCATC 7 cut(s) 610, 835, 1186, 1756, 1912, 2308, 2951
MaeI CTAG 9 cut(s) 128, 590, 902, 1244, 1262, 1616, 2225, 2526, 2747
MaeII ACGT 9 cut(s) 262, 517, 2470, 2495, 2823, 3013, 3091, 3217, 3666
MaeIII GTNAC 6 cut(s) 571, 1706, 2912, 3031, 3152, 3662
MbiI CCGCTC 1 cut(s) 2994
MfeI CAATTG 5 cut(s) 567, 780, 990, 2488, 3292
MflI RGATCY 3 cut(s) 288, 1003, 2786
MhlI GDGCHC 3 cut(s) 243, 253, 474
MlyI GAGTC 6 cut(s) 264, 336, 1241, 1795, 2206, 3047
MmeI TCCRAC 6 cut(s) 174, 559, 2040, 2292, 2477, 2862
Mph1103I ATGCAT 2 cut(s) 963, 1389
MroI TCCGGA 1 cut(s) 2653
MroXI GAANNNNTTC 2 cut(s) 1165, 2572
MslI CAYNNNNRTG 5 cut(s) 95, 546, 2341, 2506, 2797
MspA1I CMGCKG 2 cut(s) 634, 3419
MspCI CTTAAG 2 cut(s) 1457, 2216
MspI CCGG 3 cut(s) 243, 2000, 2654
MspR9I CCNGG 3 cut(s) 243, 663, 2000
MunI CAATTG 5 cut(s) 567, 780, 990, 2488, 3292
Mva1269I GAATGC 1 cut(s) 862
MvaI CCWGG 1 cut(s) 663
MvnI CGCG 2 cut(s) 975, 3611
MwoI GCNNNNNNNGC 2 cut(s) 1393, 3463
NciI CCSGG 2 cut(s) 243, 2000
NdeI CATATG 1 cut(s) 1066
NlaIV GGNNCC 3 cut(s) 290, 2357, 3132
NmeAIII GCCGAG 1 cut(s) 1422
NmuCI GTSAC 3 cut(s) 1706, 2912, 3152
NruI TCGCGA 1 cut(s) 975
NsiI ATGCAT 2 cut(s) 963, 1389
NspI RCATGY 2 cut(s) 1321, 2652
OliI CACNNNNGTG 2 cut(s) 95, 2506
PagI TCATGA 2 cut(s) 361, 769
PceI AGGCCT 1 cut(s) 1242
PciI ACATGT 1 cut(s) 2648
PciSI GCTCTTC 1 cut(s) 241
PcsI WCGNNNNNNNCGW 1 cut(s) 1375
PctI GAATGC 1 cut(s) 862
PdmI GAANNNNTTC 2 cut(s) 1165, 2572
PflFI GACNNNGTC 1 cut(s) 1661
PflMI CCANNNNNTGG 1 cut(s) 2294
PfoI TCCNGGA 1 cut(s) 1998
PkrI GCNGC 4 cut(s) 636, 3263, 3403, 3468
PleI GAGTC 6 cut(s) 264, 336, 1241, 1794, 2206, 3047
PmaCI CACGTG 2 cut(s) 2824, 3218
PmlI CACGTG 2 cut(s) 2824, 3218
PpsI GAGTC 6 cut(s) 264, 336, 1241, 1794, 2206, 3047
Ppu21I YACGTR 6 cut(s) 263, 2471, 2496, 2824, 3092, 3218
PpuMI RGGWCCY 2 cut(s) 3183, 3637
PscI ACATGT 1 cut(s) 2648
PshBI ATTAAT 1 cut(s) 3021
Psp124BI GAGCTC 1 cut(s) 474
Psp5II RGGWCCY 2 cut(s) 3183, 3637
Psp6I CCWGG 1 cut(s) 661
PspCI CACGTG 2 cut(s) 2824, 3218
PspFI CCCAGC 1 cut(s) 1956
PspGI CCWGG 1 cut(s) 661
PspN4I GGNNCC 3 cut(s) 290, 2357, 3132
PspPI GGNCC 4 cut(s) 3131, 3183, 3544, 3637
PspPPI RGGWCCY 2 cut(s) 3183, 3637
PstI CTGCAG 2 cut(s) 1451, 2311
PstNI CAGNNNCTG 1 cut(s) 323
PsuI RGATCY 3 cut(s) 288, 1003, 2786
PsyI GACNNNGTC 1 cut(s) 1661
PvuII CAGCTG 2 cut(s) 634, 3419
RruI TCGCGA 1 cut(s) 975
RsaI GTAC 6 cut(s) 48, 1269, 2094, 2494, 3090, 3603
RsaNI GTAC 6 cut(s) 47, 1268, 2093, 2493, 3089, 3602
RseI CAYNNNNRTG 5 cut(s) 95, 546, 2341, 2506, 2797
SacI GAGCTC 1 cut(s) 474
SalI GTCGAC 1 cut(s) 1410
SapI GCTCTTC 1 cut(s) 241
SatI GCNGC 4 cut(s) 635, 3262, 3402, 3467
Sau96I GGNCC 4 cut(s) 3131, 3183, 3544, 3637
SchI GAGTC 6 cut(s) 264, 336, 1241, 1795, 2206, 3047
ScrFI CCNGG 3 cut(s) 243, 663, 2000
SduI GDGCHC 3 cut(s) 243, 253, 474
SfaNI GCATC 7 cut(s) 610, 835, 1186, 1756, 1912, 2308, 2951
SfcI CTRYAG 5 cut(s) 336, 1145, 1447, 2307, 2667
SinI GGWCC 4 cut(s) 3131, 3183, 3544, 3637
SmiMI CAYNNNNRTG 5 cut(s) 95, 546, 2341, 2506, 2797
SmlI CTYRAG 6 cut(s) 1136, 1457, 2099, 2216, 3047, 3476
SmoI CTYRAG 6 cut(s) 1136, 1457, 2099, 2216, 3047, 3476
SnaBI TACGTA 2 cut(s) 2471, 2496
SpeI ACTAGT 1 cut(s) 2746
SseBI AGGCCT 1 cut(s) 1242
SsiI CCGC 4 cut(s) 1282, 2992, 3402, 3609
SspI AATATT 3 cut(s) 2316, 2331, 3006
SspMI CTAG 9 cut(s) 128, 590, 902, 1244, 1262, 1616, 2225, 2526, 2747
SstI GAGCTC 1 cut(s) 474
StuI AGGCCT 1 cut(s) 1242
StyD4I CCNGG 3 cut(s) 241, 661, 1998
StyI CCWWGG 1 cut(s) 2288
TaiI ACGT 9 cut(s) 265, 520, 2473, 2498, 2826, 3016, 3094, 3220, 3669
TaqI TCGA 8 cut(s) 111, 501, 796, 811, 1012, 1411, 2147, 3075
TaqII GACCGA 1 cut(s) 3148
TauI GCSGC 1 cut(s) 3404
TscAI CASTG 5 cut(s) 657, 724, 1639, 1740, 1843
TseFI GTSAC 3 cut(s) 1706, 2912, 3152
TseI GCWGC 3 cut(s) 634, 3261, 3466
Tsp45I GTSAC 3 cut(s) 1706, 2912, 3152
TspGWI ACGGA 1 cut(s) 2511
TspRI CASTG 5 cut(s) 657, 724, 1639, 1740, 1843
Tth111I GACNNNGTC 1 cut(s) 1661
Van91I CCANNNNNTGG 1 cut(s) 2294
Vha464I CTTAAG 2 cut(s) 1457, 2216
VpaK11BI GGWCC 4 cut(s) 3131, 3183, 3544, 3637
VspI ATTAAT 1 cut(s) 3021
XbaI TCTAGA 2 cut(s) 2224, 2525
XceI RCATGY 2 cut(s) 1321, 2652
XmiI GTMKAC 5 cut(s) 1322, 1411, 1495, 2498, 2751
XmnI GAANNNNTTC 2 cut(s) 1165, 2572
XspI CTAG 9 cut(s) 128, 590, 902, 1244, 1262, 1616, 2225, 2526, 2747
Zsp2I ATGCAT 2 cut(s) 963, 1389
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.