Prupe.3G141500_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0005548
Physical Location & Seq
Reverse (-)
15146104 .. 15150712
4609 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G141500.1

Sequence Viewer

Length: 4107 bp
ATGGGGACACAGAGTGGTTGTTTGACCTACTGTGATCCTAACATAGAAGATCTTAAAGATGAGCTTACAAAATTAATTGTGAAGAGAGATGCGTTGCAGAGGTTGGTCAATGAAGCCGAAAGGGAAGGGGAAGTGATCAACTATGATGTTTTGATTTGGCTACGCACGGTGGACGTGATGATCGGCAAAGTCTCGCGTTTTGAAGATGAAGTCAACAGGAGAAGACGATGCTTGTATTGGCTGAGTTTGAGTAGGCAAGCGCAGAAGATTAAACAACATGTTGTTCATCTCCTTGAAGAAGGAAAATTCCAAAATGTAGCCCATCCAGGAGCTCCACAGATCCAAAATGTAGCCCATCCAGCAGCTCTACAGACGATACTGCCAACATTAACAGCAGGCGTTAGAGGCCCTAAATCCAGAATAACAGTCATGAATCATGTCTTGGAGGCTTTGAAGAATGAAAAAATAACAATGGTTGGGATTTGCGGGATGGACGGTGTGGGTAAAACCCTAATGGCAGAAGAAATCATTAAAATAGTACAAGGAAAGATGTTTGATGAGGTTGTGATGATAGTTGTGTCCCCAAACCCAAACATTAGAAAAATACAAGCTGAAATTGCAGATAAACTAGGTCTTACAATTGACCTAGAAACTGAAAAGGGAAGAGAACTAATCCTAAGTGAAAGGATCCTCATCGTATTAGATGATGTATGGTCAGTACTTGATTTTGAGGCAATAGGACTTCCGTTTGGACCTTCACATAAAGGTTGCAAAGTTTTGGTGACATCATCGAATTTGGATGTGTGCTATGAGATGGGGAGTCAAAAGAACTTTACCCTGCCGATGTTAACTGCAGAAGAAGCATGGGAGCTATTCCAGGAGACAATAGGTGAACCCTTGGATGCTGATCCTGATTTATGTGGTATTGCAAAAGCGCTAACAAATGAATGTGGAGGTTTACCGTATAGTGTCGTAACTATTGCGAAAGCGCTACAAAATAATAAGAGTAAGTATGAATGGGCTAATGCCCTTCAGCAACTAAAAGCGCATGAAATTCCTCCCCAAGCTTATTATTCTAGTATAAAACTCAGTTATGAACGATTGGAGAACGATGAACTCAAGTCATGCTTTTTACTATGTTGTTTATTTCCACAAGGTTACGATATTCCAATTGATTATTTGGTTAGATATGCGTGGGGCCAAGGAATAATTTCTGACAGGTTTGATTCAGTGGAGGCAGCAAGAATGCGAGTACATTTTTTAGTTGTCAAACTAAAAAGGAGGTTTTTGCTGCTAGGTAGCAGCAAGGAAGGCTGTACCAAAATGCATGGCGTAGTTCATGGCGTTGCCATATCAATTGCTTCCCAAGATATGGATGTTTTTATGGTACAAGATCAAGCTGGATATAGAAGTTGGCAAATAAATCCTCCATACAAACAGTACACAACAGTTTCACTGAATGATGTTCATATTGACGACCCCATTGTGACAGGTTTGGGGTATCAAGAACTTAAACTTCTACAACTAAAAAATAGCGAAGTTTCAGAATCTGCCCTGGAAAGCATGTTGAAAGGGATGAAGCTCCAGGTATTATCTTTCATACATACAGGTTCAACATCAATTAGAGTGCTGCTAAGACACCTTCGGACCTTGTCTCTAGATGATTGTACACTGGGAGACATATCTAGTGTTGGGAAATTGGAGAATCTCGAGATCCTCAGTTTTGCGCGTTCCAACATCAAAGTGTTACCGAGAGAACTTGCAGATCTTCAACAATTAAGGTTGTTAGATACGACAGATTGTTCTTATCTAAAGGAAATTCCTCATGGTATCCTATCCGGATTAAGTAAACTAGAAGAGCTGTACATGACACGCAGCTTTAATAAATGGGAGCCTGCAGAGGAAGTCGATCAAAGCAAAGAAGGTGAGATCCGGATGGCAAGCCTAGCTGAGGTGATGTCTCTACCCTCTAAAAATTTGACAGTTTTAGCCATAGATATACCGGATTTCAAGTTGTTGCCGGAAGATGAAGTGCTCTTGGAAAAGGAAACAACAAGATTTCATATATCTATATGCAAGGCTAATACTTTTCCTATGCCACAACCCCTGGATTACGGATTTAAAAATACTGTTAAGCTTGCTGGTGATGCAAAGGAGTTCATGCAAAATGGAGATATTAGATTTCTGTTGAAGTACTCTAGAGCTTTGTACTTCAGAGAAACTAAAAATCTGAACTGTGTCCTCAATGACCAAGTAAGTTTTGAAGGCTTGGAAGCTTTATCGATTCAAAATAGTAAGCACGGCACAGAGTCTCTTCTAAGTGATCAAACGGGTGAGACTGCCTTCCTTCAGTTGAAGTCACTTGAGCTAAACGGGATATCGGATTTACTAGCAATATGTCATGGGCAGCTTCAAAATCAATCTTTTGGCAACCTAATATCCCTTCAGATCAGTTGTTGTTCTGAGTTAAGATATGCCTTTCCAGTGTCTATAGCAAGAAACTTGGTACAACTCCAGTCCTTAGTTGTTTATCTATGCGACAAAATGCAAGAAATTGTCTCAAATGAGGGGTTGGAAGATGAGATTGATGCATCTTCCAAGGTTGCTTTTCCTAATTTAACGGAGCTCAATCTGTATGGTGTATCAAACCTGGTTAGTTTCTACATAGCCAACCAGCCATGTAGCTCAAAACCTGAGATGGCAGAGACTTGGTCGTCAAATCAAGGAAATGAAGCTGGCGGGTCCTCTTCTAAGAAATCAAAAATACTACTTCCACCAAATTGCATTTCCTGGTTAAAAAATCTAGAAGAACTAGAAGTGAAGCTGTCATCAAAAATAGAAGTGCTATTTGATCTAGAGGGCCAGATGGTTCAGGGGAACACTGAAGAAATTCCGGTCTCCTTCACTCAACTACGAAAAGTGTCCCTTGCAAATGTAACTCTGCTTGCACACTTGTGGAAGAACGTTCCATGTCGAATCCGGTGCTTTGAAAATTTAAGGTTTTTAACAGTCCTAAGTTGTGACAGCTTGCAATACCTGTTCTCCTACTCAGTGGCCAGGCAACTTGTGGGTCTTGAAGAATTAAAAATCTCCTATTGCAGGACTATGAAAACCATAGTCGCACGTCAGTATAAAGAAGAGATAGGGTCCACAAGGATCTTGTTTCCCAAATTGAGTCTTAGACTACAAGACCTGTCAAGCCTTGTGAGCCTCAGTGATGGTCCCAAGACATTTAGCGACGATGCTGATAATACTTTTGTATGGCCATCCACAAGAGTAATGCACCTGAGAAGATGTCCCAAATTGGAGACATTGGGTTCATTGATTCCACGAAAACAAAAACAAAGAAAGAATATTCCACAAATCCAAAAGTTGGATGCAGGTCCTAGTGAACGCACTTCACAAAAAAAGAATATTCCACAACCATCAGTTTCCCCACCATTCTGGTCCAGTGAACACACTTCCAAAAAAGAGGTTACACCGTCGACAACTATTAATGAGTCAGATGACAGTGATAATCTAGAATGTCTTGAAATGGAAGACTGCGAGTCACTGCAAGTGATATTCCAACCTAAAGAAAGCAATTATGCACACAAATTTACCAAGATCAAACGATTGGTATTAAAAGCTTTGCCAATGTTAATTGACATTTGGGAAATGGGTTCACAACAAATCGACGGCTTTCGGAACTTGAGATGGCTAGAAGTACATGGTTGTGCGCAAATGAGATATTTGTTTTCACCTTCCATAGTTAAACTTCTTATCAGCCTAGAGCAGATAAAAGTTATAGACTGTTGGATGATGGAAGAAATTGTTGCAGAGACAGAAGCAGAACATGCAGAGGAAATGGAACTTCCTTTAGTGAATTCCATCATGCTTCGTAATCTACCAAACTTCAAGCGTGTGTGCACTGAAGCTTATACTTTAAAGTGCCCATCCCTGGCAGTGGCGGAATTGGTTTACATTGAATGCAATCCAAGACTGAAAATAAAAATTGATCTCGGGGTTCTACGCACAGTTCCTGCAGAGAATGCATCTGTCTTGAAGCAAAGGTATGTTGTACTGTCAACACCAACTCTCACTAAAAATATTTTGGGGTCTATATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

1369

Amino Acids

154.21

Weight (kDa)

5.74

Isoelectric Point (pI)

44.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2713
Acc16I TGCGCA 1 cut(s) 3720
Acc36I ACCTGC 1 cut(s) 3371
AccB7I CCANNNNNTGG 2 cut(s) 1372, 3373
AccI GTMKAC 1 cut(s) 3485
AccII CGCG 2 cut(s) 196, 1729
AccIII TCCGGA 2 cut(s) 1838, 1932
AciI CCGC 3 cut(s) 486, 2739, 3950
AclI AACGTT 1 cut(s) 2964
AclWI GGATC 8 cut(s) 29, 334, 682, 695, 902, 1708, 1924, 3164
AcoI YGGCCR 2 cut(s) 3054, 3263
AcsI RAATTY 9 cut(s) 305, 793, 1053, 1818, 1975, 2889, 2992, 3596, 3865
AcuI CTGAAG 6 cut(s) 1016, 2197, 2333, 2429, 2904, 3933
AdeI CACNNNGTG 1 cut(s) 14
AfeI AGCGCT 2 cut(s) 936, 990
AfiI CCNNNNNNNGG 6 cut(s) 1372, 1951, 3099, 3373, 3940, 3946
AflIII ACRYGT 1 cut(s) 277
AhdI GACNNNNNGTC 1 cut(s) 3547
AjiI CACGTC 2 cut(s) 175, 3125
AjnI CCWGG 9 cut(s) 325, 876, 1554, 1584, 2106, 2649, 2789, 3056, 3939
AjuI GAANNNNNNNTTGG 4 cut(s) 425, 457, 2770, 2802
AleI CACNNNNGTG 1 cut(s) 2953
Alw21I GWGCWC 4 cut(s) 334, 2037, 2628, 3911
Alw44I GTGCAC 1 cut(s) 3907
AlwI GGATC 8 cut(s) 29, 334, 682, 695, 902, 1708, 1924, 3164
AlwNI CAGNNNCTG 2 cut(s) 1550, 4022
Ama87I CYCGRG 2 cut(s) 1709, 4001
Aor13HI TCCGGA 2 cut(s) 1838, 1932
Aor51HI AGCGCT 2 cut(s) 936, 990
AoxI GGCC 5 cut(s) 406, 1198, 2860, 3054, 3263
ApaLI GTGCAC 1 cut(s) 3907
ApeKI GCWGC 7 cut(s) 362, 1238, 1291, 1302, 1630, 1875, 2407
ApoI RAATTY 9 cut(s) 305, 793, 1053, 1818, 1975, 2889, 2992, 3596, 3865
AseI ATTAAT 2 cut(s) 74, 3495
Asp700I GAANNNNTTC 2 cut(s) 1210, 2889
AspLEI GCGC 6 cut(s) 262, 937, 991, 1048, 1729, 3721
AsuHPI GGTGA 7 cut(s) 793, 902, 1937, 1966, 2156, 2345, 3732
AvaI CYCGRG 2 cut(s) 1709, 4001
AvaII GGWCC 7 cut(s) 752, 1647, 2742, 3147, 3221, 3383, 3447
BaeGI GKGCMC 2 cut(s) 3911, 3935
BalI TGGCCA 2 cut(s) 3056, 3265
BamHI GGATCC 1 cut(s) 687
BanII GRGCYC 2 cut(s) 334, 2628
BbsI GAAGAC 2 cut(s) 229, 3546
Bbv12I GWGCWC 4 cut(s) 334, 2037, 2628, 3911
BbvCI CCTCAGC 1 cut(s) 1950
BbvI GCAGC 7 cut(s) 374, 1250, 1278, 1314, 1617, 1887, 2419
BceAI ACGGC 2 cut(s) 2317, 3694
BcgI CGANNNNNNTGC 2 cut(s) 2964, 2998
BciT130I CCWGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
BciVI GTATCC 1 cut(s) 1841
BclI TGATCA 2 cut(s) 135, 2323
BfmI CTRYAG 5 cut(s) 368, 852, 1896, 2490, 4023
BfoI RGCGCY 2 cut(s) 938, 992
BfuAI ACCTGC 1 cut(s) 3371
BfuI GTATCC 1 cut(s) 1841
BglII AGATCT 2 cut(s) 49, 1765
BisI GCNGC 7 cut(s) 363, 1239, 1292, 1303, 1631, 1876, 2408
BlsI GCNGC 7 cut(s) 364, 1240, 1293, 1304, 1632, 1877, 2409
BmcAI AGTACT 2 cut(s) 720, 2195
Bme1390I CCNGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
Bme18I GGWCC 7 cut(s) 752, 1647, 2742, 3147, 3221, 3383, 3447
BmeRI GACNNNNNGTC 1 cut(s) 3547
BmeT110I CYCGRG 2 cut(s) 1709, 4001
BmgBI CACGTC 2 cut(s) 175, 3125
BmiI GGNNCC 6 cut(s) 689, 1199, 1893, 2743, 3148, 3223
BmrFI CCNGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
BmrI ACTGGG 1 cut(s) 1682
BmsI GCATC 9 cut(s) 79, 218, 892, 2137, 2578, 2600, 3232, 3367, 4043
BmuI ACTGGG 1 cut(s) 1682
BpiI GAAGAC 2 cut(s) 229, 3546
BpmI CTGGAG 2 cut(s) 1568, 2498
Bpu10I CCTNAGC 1 cut(s) 1950
BpuEI CTTGAG 3 cut(s) 1103, 2384, 3712
Bsa29I ATCGAT 1 cut(s) 2282
BsaBI GATNNNNATC 2 cut(s) 692, 906
BsaI GGTCTC 1 cut(s) 2902
BsaJI CCNNGG 6 cut(s) 897, 1201, 1554, 2106, 2598, 3939
BsaWI WCCGGW 5 cut(s) 1838, 1932, 2002, 2893, 2979
BsaXI ACNNNNNCTCC 2 cut(s) 3026, 3056
Bsc4I CCNNNNNNNGG 6 cut(s) 1372, 1951, 3099, 3373, 3940, 3946
Bse1I ACTGG 4 cut(s) 1677, 2483, 2515, 3450
Bse8I GATNNNNATC 2 cut(s) 692, 906
BseAI TCCGGA 2 cut(s) 1838, 1932
BseBI CCWGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
BseCI ATCGAT 1 cut(s) 2282
BseDI CCNNGG 6 cut(s) 897, 1201, 1554, 2106, 2598, 3939
BseJI GATNNNNATC 2 cut(s) 692, 906
BseLI CCNNNNNNNGG 6 cut(s) 1372, 1951, 3099, 3373, 3940, 3946
BseMII CTCAG 9 cut(s) 233, 1102, 1732, 1941, 2454, 2685, 3063, 3226, 3278
BseNI ACTGG 4 cut(s) 1677, 2483, 2515, 3450
BseSI GKGCMC 2 cut(s) 3911, 3935
BseXI GCAGC 7 cut(s) 374, 1250, 1278, 1314, 1617, 1887, 2419
Bsh1236I CGCG 2 cut(s) 196, 1729
BshFI GGCC 5 cut(s) 408, 1200, 2862, 3056, 3265
BshVI ATCGAT 1 cut(s) 2282
BsiHKAI GWGCWC 4 cut(s) 334, 2037, 2628, 3911
BsiHKCI CYCGRG 2 cut(s) 1709, 4001
BsiSI CCGG 6 cut(s) 1839, 1933, 2003, 2021, 2894, 2980
BslFI GGGAC 5 cut(s) 19, 565, 2908, 3207, 3282
BslI CCNNNNNNNGG 6 cut(s) 1372, 1951, 3099, 3373, 3940, 3946
BsmFI GGGAC 5 cut(s) 19, 565, 2908, 3207, 3282
BsmI GAATGC 3 cut(s) 1251, 3974, 4036
BsnI GGCC 5 cut(s) 408, 1200, 2862, 3056, 3265
Bso31I GGTCTC 1 cut(s) 2902
BsoBI CYCGRG 2 cut(s) 1709, 4001
Bsp1286I GDGCHC 5 cut(s) 334, 2037, 2628, 3911, 3935
Bsp13I TCCGGA 2 cut(s) 1838, 1932
Bsp1407I TGTACA 2 cut(s) 1667, 1863
BspACI CCGC 3 cut(s) 486, 2739, 3950
BspANI GGCC 5 cut(s) 408, 1200, 2862, 3056, 3265
BspCNI CTCAG 9 cut(s) 234, 1101, 1731, 1942, 2455, 2686, 3062, 3225, 3279
BspDI ATCGAT 1 cut(s) 2282
BspEI TCCGGA 2 cut(s) 1838, 1932
BspFNI CGCG 2 cut(s) 196, 1729
BspHI TCATGA 1 cut(s) 429
BspLI GGNNCC 6 cut(s) 689, 1199, 1893, 2743, 3148, 3223
BspMAI CTGCAG 3 cut(s) 856, 1900, 4027
BspMI ACCTGC 1 cut(s) 3371
BspPI GGATC 8 cut(s) 29, 334, 682, 695, 902, 1708, 1924, 3164
BspQI GCTCTTC 1 cut(s) 1851
BspTNI GGTCTC 1 cut(s) 2902
BsrGI TGTACA 2 cut(s) 1667, 1863
BsrI ACTGG 4 cut(s) 1677, 2483, 2515, 3450
BssECI CCNNGG 6 cut(s) 897, 1201, 1554, 2106, 2598, 3939
BssT1I CCWWGG 3 cut(s) 897, 1201, 2598
Bst2UI CCWGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
Bst6I CTCTTC 6 cut(s) 77, 658, 1851, 2319, 2752, 3132
BstAPI GCANNNNNTGC 2 cut(s) 3836, 4031
BstAUI TGTACA 2 cut(s) 1667, 1863
BstC8I GCNNGC 8 cut(s) 258, 397, 1896, 1942, 2139, 2737, 2946, 3029
BstENI CCTNNNNNAGG 2 cut(s) 1949, 3097
BstFNI CGCG 2 cut(s) 196, 1729
BstH2I RGCGCY 2 cut(s) 938, 992
BstHHI GCGC 6 cut(s) 262, 937, 991, 1048, 1729, 3721
BstNI CCWGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
BstNSI RCATGY 3 cut(s) 281, 1567, 3839
BstSCI CCNGG 9 cut(s) 325, 876, 1554, 1584, 2106, 2649, 2789, 3056, 3939
BstSFI CTRYAG 5 cut(s) 368, 852, 1896, 2490, 4023
BstSLI GKGCMC 2 cut(s) 3911, 3935
BstUI CGCG 2 cut(s) 196, 1729
BstV1I GCAGC 7 cut(s) 374, 1250, 1278, 1314, 1617, 1887, 2419
BstV2I GAAGAC 2 cut(s) 229, 3546
BstX2I RGATCY 7 cut(s) 49, 339, 687, 1713, 1765, 1929, 3156
BstXI CCANNNNNNTGG 1 cut(s) 3444
BstYI RGATCY 7 cut(s) 49, 339, 687, 1713, 1765, 1929, 3156
Bsu15I ATCGAT 1 cut(s) 2282
BsuI GTATCC 1 cut(s) 1841
BsuRI GGCC 5 cut(s) 408, 1200, 2862, 3056, 3265
BsuTUI ATCGAT 1 cut(s) 2282
BtrI CACGTC 2 cut(s) 175, 3125
BtsI GCAGTG 2 cut(s) 3551, 3951
BveI ACCTGC 1 cut(s) 3371
Cac8I GCNNGC 8 cut(s) 258, 397, 1896, 1942, 2139, 2737, 2946, 3029
CaiI CAGNNNCTG 2 cut(s) 1550, 4022
CciI TCATGA 1 cut(s) 429
CfoI GCGC 6 cut(s) 262, 937, 991, 1048, 1729, 3721
ClaI ATCGAT 1 cut(s) 2282
CsiI ACCWGGT 1 cut(s) 2649
DraI TTTAAA 2 cut(s) 2122, 3927
DraIII CACNNNGTG 1 cut(s) 14
DrdI GACNNNNNNGTC 1 cut(s) 2713
DriI GACNNNNNGTC 1 cut(s) 3547
DseDI GACNNNNNNGTC 1 cut(s) 2713
EaeI YGGCCR 2 cut(s) 3054, 3263
Eam1104I CTCTTC 6 cut(s) 77, 658, 1851, 2319, 2752, 3132
Eam1105I GACNNNNNGTC 1 cut(s) 3547
EarI CTCTTC 6 cut(s) 77, 658, 1851, 2319, 2752, 3132
EciI GGCGGA 1 cut(s) 3965
Ecl136II GAGCTC 2 cut(s) 332, 2626
Eco130I CCWWGG 3 cut(s) 897, 1201, 2598
Eco24I GRGCYC 2 cut(s) 334, 2628
Eco31I GGTCTC 1 cut(s) 2902
Eco32I GATATC 1 cut(s) 2379
Eco47I GGWCC 7 cut(s) 752, 1647, 2742, 3147, 3221, 3383, 3447
Eco47III AGCGCT 2 cut(s) 936, 990
Eco53kI GAGCTC 2 cut(s) 332, 2626
Eco57I CTGAAG 6 cut(s) 1016, 2197, 2333, 2429, 2904, 3933
Eco88I CYCGRG 2 cut(s) 1709, 4001
EcoICRI GAGCTC 2 cut(s) 332, 2626
EcoNI CCTNNNNNAGG 2 cut(s) 1949, 3097
EcoO109I RGGNCCY 3 cut(s) 407, 2742, 3383
EcoRI GAATTC 1 cut(s) 3865
EcoRII CCWGG 9 cut(s) 325, 876, 1554, 1584, 2106, 2649, 2789, 3056, 3939
EcoRV GATATC 1 cut(s) 2379
EcoT14I CCWWGG 3 cut(s) 897, 1201, 2598
EcoT22I ATGCAT 3 cut(s) 1329, 2593, 4036
EcoT38I GRGCYC 2 cut(s) 334, 2628
ErhI CCWWGG 3 cut(s) 897, 1201, 2598
FalI AAGNNNNNCTT 6 cut(s) 48, 80, 1112, 1144, 2910, 2942
FaqI GGGAC 5 cut(s) 19, 565, 2908, 3207, 3282
FauI CCCGC 2 cut(s) 479, 2732
FbaI TGATCA 2 cut(s) 135, 2323
FblI GTMKAC 1 cut(s) 3485
Fnu4HI GCNGC 7 cut(s) 363, 1239, 1292, 1303, 1631, 1876, 2408
FriOI GRGCYC 2 cut(s) 334, 2628
Fsp4HI GCNGC 7 cut(s) 363, 1239, 1292, 1303, 1631, 1876, 2408
FspI TGCGCA 1 cut(s) 3720
GlaI GCGC 6 cut(s) 261, 936, 990, 1047, 1728, 3720
GluI GCNGC 7 cut(s) 363, 1239, 1292, 1303, 1631, 1876, 2408
GsuI CTGGAG 2 cut(s) 1568, 2498
HaeII RGCGCY 2 cut(s) 938, 992
HaeIII GGCC 5 cut(s) 408, 1200, 2862, 3056, 3265
HapII CCGG 6 cut(s) 1839, 1933, 2003, 2021, 2894, 2980
HhaI GCGC 6 cut(s) 262, 937, 991, 1048, 1729, 3721
Hin6I GCGC 6 cut(s) 260, 935, 989, 1046, 1727, 3719
HinP1I GCGC 6 cut(s) 260, 935, 989, 1046, 1727, 3719
HincII GTYRAC 4 cut(s) 214, 849, 3486, 4068
HindII GTYRAC 4 cut(s) 214, 849, 3486, 4068
HindIII AAGCTT 5 cut(s) 1065, 2135, 2274, 3627, 3915
HpaI GTTAAC 1 cut(s) 849
HpaII CCGG 6 cut(s) 1839, 1933, 2003, 2021, 2894, 2980
HphI GGTGA 7 cut(s) 793, 902, 1937, 1966, 2156, 2345, 3732
Hpy99I CGWCG 3 cut(s) 3242, 3487, 3680
HpyCH4IV ACGT 3 cut(s) 174, 2964, 3124
HpySE526I ACGT 3 cut(s) 174, 2964, 3124
HspAI GCGC 6 cut(s) 260, 935, 989, 1046, 1727, 3719
Kpn2I TCCGGA 2 cut(s) 1838, 1932
Ksp22I TGATCA 2 cut(s) 135, 2323
KspAI GTTAAC 1 cut(s) 849
LguI GCTCTTC 1 cut(s) 1851
LmnI GCTCC 6 cut(s) 329, 337, 868, 1587, 1891, 2623
Lsp1109I GCAGC 7 cut(s) 374, 1250, 1278, 1314, 1617, 1887, 2419
LweI GCATC 9 cut(s) 79, 218, 892, 2137, 2578, 2600, 3232, 3367, 4043
MabI ACCWGGT 1 cut(s) 2649
MaeII ACGT 3 cut(s) 174, 2964, 3124
MfeI CAATTG 3 cut(s) 639, 1170, 1356
MflI RGATCY 7 cut(s) 49, 339, 687, 1713, 1765, 1929, 3156
MhlI GDGCHC 5 cut(s) 334, 2037, 2628, 3911, 3935
MlsI TGGCCA 2 cut(s) 3056, 3265
MluNI TGGCCA 2 cut(s) 3056, 3265
MlyI GAGTC 5 cut(s) 829, 2318, 3184, 3509, 3557
MmeI TCCRAC 5 cut(s) 1758, 2553, 3354, 3592, 3776
Mox20I TGGCCA 2 cut(s) 3056, 3265
Mph1103I ATGCAT 3 cut(s) 1329, 2593, 4036
MroI TCCGGA 2 cut(s) 1838, 1932
MroXI GAANNNNTTC 2 cut(s) 1210, 2889
MscI TGGCCA 2 cut(s) 3056, 3265
MslI CAYNNNNRTG 3 cut(s) 1742, 2953, 3714
Msp20I TGGCCA 2 cut(s) 3056, 3265
MspI CCGG 6 cut(s) 1839, 1933, 2003, 2021, 2894, 2980
MspR9I CCNGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
MunI CAATTG 3 cut(s) 639, 1170, 1356
Mva1269I GAATGC 3 cut(s) 1251, 3974, 4036
MvaI CCWGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
MvnI CGCG 2 cut(s) 196, 1729
NlaIV GGNNCC 6 cut(s) 689, 1199, 1893, 2743, 3148, 3223
NmuCI GTSAC 5 cut(s) 781, 1486, 2358, 3020, 3549
NsbI TGCGCA 1 cut(s) 3720
NsiI ATGCAT 3 cut(s) 1329, 2593, 4036
NspI RCATGY 3 cut(s) 281, 1567, 3839
OliI CACNNNNGTG 1 cut(s) 2953
PaeR7I CTCGAG 1 cut(s) 1709
PagI TCATGA 1 cut(s) 429
PciI ACATGT 1 cut(s) 277
PciSI GCTCTTC 1 cut(s) 1851
PctI GAATGC 3 cut(s) 1251, 3974, 4036
PdmI GAANNNNTTC 2 cut(s) 1210, 2889
PfeI GAWTC 7 cut(s) 433, 1226, 1547, 1705, 2284, 2976, 3325
PflFI GACNNNGTC 2 cut(s) 1651, 2710
PflMI CCANNNNNTGG 2 cut(s) 1372, 3373
PfoI TCCNGGA 2 cut(s) 325, 876
PkrI GCNGC 7 cut(s) 364, 1240, 1293, 1304, 1632, 1877, 2409
PleI GAGTC 5 cut(s) 828, 2317, 3183, 3508, 3556
PpsI GAGTC 5 cut(s) 828, 2317, 3183, 3508, 3556
PpuMI RGGWCCY 2 cut(s) 2742, 3383
PscI ACATGT 1 cut(s) 277
PshBI ATTAAT 2 cut(s) 74, 3495
Psp124BI GAGCTC 2 cut(s) 334, 2628
Psp1406I AACGTT 1 cut(s) 2964
Psp5II RGGWCCY 2 cut(s) 2742, 3383
Psp6I CCWGG 9 cut(s) 325, 876, 1554, 1584, 2106, 2649, 2789, 3056, 3939
PspGI CCWGG 9 cut(s) 325, 876, 1554, 1584, 2106, 2649, 2789, 3056, 3939
PspN4I GGNNCC 6 cut(s) 689, 1199, 1893, 2743, 3148, 3223
PspPPI RGGWCCY 2 cut(s) 2742, 3383
PstI CTGCAG 3 cut(s) 856, 1900, 4027
PstNI CAGNNNCTG 2 cut(s) 1550, 4022
PsuI RGATCY 7 cut(s) 49, 339, 687, 1713, 1765, 1929, 3156
PsyI GACNNNGTC 2 cut(s) 1651, 2710
RseI CAYNNNNRTG 3 cut(s) 1742, 2953, 3714
SacI GAGCTC 2 cut(s) 334, 2628
SalI GTCGAC 1 cut(s) 3484
SapI GCTCTTC 1 cut(s) 1851
SatI GCNGC 7 cut(s) 363, 1239, 1292, 1303, 1631, 1876, 2408
ScaI AGTACT 2 cut(s) 720, 2195
SchI GAGTC 5 cut(s) 829, 2318, 3184, 3509, 3557
ScrFI CCNGG 9 cut(s) 327, 878, 1556, 1586, 2108, 2651, 2791, 3058, 3941
SduI GDGCHC 5 cut(s) 334, 2037, 2628, 3911, 3935
SexAI ACCWGGT 1 cut(s) 2649
SfaNI GCATC 9 cut(s) 79, 218, 892, 2137, 2578, 2600, 3232, 3367, 4043
SfcI CTRYAG 5 cut(s) 368, 852, 1896, 2490, 4023
Sfr274I CTCGAG 1 cut(s) 1709
SinI GGWCC 7 cut(s) 752, 1647, 2742, 3147, 3221, 3383, 3447
SlaI CTCGAG 1 cut(s) 1709
SmiMI CAYNNNNRTG 3 cut(s) 1742, 2953, 3714
SmlI CTYRAG 4 cut(s) 1118, 1709, 2363, 3691
SmoI CTYRAG 4 cut(s) 1118, 1709, 2363, 3691
SsiI CCGC 3 cut(s) 486, 2739, 3950
SspI AATATT 3 cut(s) 3355, 3415, 4090
SstI GAGCTC 2 cut(s) 334, 2628
StyD4I CCNGG 9 cut(s) 325, 876, 1554, 1584, 2106, 2649, 2789, 3056, 3939
StyI CCWWGG 3 cut(s) 897, 1201, 2598
TaiI ACGT 3 cut(s) 177, 2967, 3127
TaqI TCGA 7 cut(s) 791, 1710, 1908, 2282, 2974, 3485, 3675
TfiI GAWTC 7 cut(s) 433, 1226, 1547, 1705, 2284, 2976, 3325
TseFI GTSAC 5 cut(s) 781, 1486, 2358, 3020, 3549
TseI GCWGC 7 cut(s) 362, 1238, 1291, 1302, 1630, 1875, 2407
Tsp45I GTSAC 5 cut(s) 781, 1486, 2358, 3020, 3549
TspGWI ACGGA 3 cut(s) 735, 2130, 2636
Tth111I GACNNNGTC 2 cut(s) 1651, 2710
Van91I CCANNNNNTGG 2 cut(s) 1372, 3373
VneI GTGCAC 1 cut(s) 3907
VpaK11BI GGWCC 7 cut(s) 752, 1647, 2742, 3147, 3221, 3383, 3447
VspI ATTAAT 2 cut(s) 74, 3495
XagI CCTNNNNNAGG 2 cut(s) 1949, 3097
XapI RAATTY 9 cut(s) 305, 793, 1053, 1818, 1975, 2889, 2992, 3596, 3865
XbaI TCTAGA 5 cut(s) 1657, 2198, 2803, 2854, 3520
XceI RCATGY 3 cut(s) 281, 1567, 3839
XcmI CCANNNNNNNNNTGG 1 cut(s) 3064
XhoI CTCGAG 1 cut(s) 1709
XmiI GTMKAC 1 cut(s) 3485
XmnI GAANNNNTTC 2 cut(s) 1210, 2889
ZrmI AGTACT 2 cut(s) 720, 2195
Zsp2I ATGCAT 3 cut(s) 1329, 2593, 4036
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.