MD11G1189800.v1.1

Exosome complex

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0003830
Physical Location & Seq
Reverse (-)
26783366 .. 26788702
5337 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1189800.v1.1.491

Sequence Viewer

Length: 1326 bp
ATGGAGCATAGATTAGCGAACACATCGCATCTCACGCTGAACCAGAAGAAGTTCATCGAGACCGCTCTACTCGCCGACCTCCGAGCCGACGGCCGCCGGCCCTTCGACTACCGTAACCTCACCATCAAGTTCGGCAAAGAAGAGGGCTCGGCGGAGGTCCAGCTGGGCCAAACTCACGTAATGGCCATCATCACTGCCCAGCTTGTCCAGCCCTACCGCGACAGGCCCAATGACGGCACTCTCTCCATCTTCACTGAGTTCTCCCCAATGGCCGACCCTTCCTTTGAGCCAGGCCGCCCCGGCGAGTCTGCCGTCGAGCTCGGCCGCGTAATCGACCGCGGTCTTAGGGAAAGCCGAGCGGTTGATACAGAATCACTTTTTGTTCTTTCAGGGAAGTTAGTTTGGGCTATTCGTGTTGATCTCCATATTTTAGATAATGGAGGAAACCTTATTGATGCTGCTAACATTGCAGCATTGGCTGCTTTGTTGACGTTCCGGAGGCCTGAAATCTCCTTGGGGGGAGAGGATAGTCAGGAAGTGACTGTACATCCACCTGAGGAGAGGGAGCCACTTCATCTGATCATACATCATCTCCCAATAGCAGTAACCTTTGCATTCTTCAATTATGAGAGTAGTGTGGTGATAGATCCAACCCATGAGGAAGAGGCTTTTATGGGGGGGCGAATGACTGCGACAATTAATGCAAATGGAGATGTTTGTGCTATTCAAAAAGCTGGAGGGGAGGGTGTCTTGCAGAGTGTTATAATGCAATGTTTGCGAATTGCTTCTGTTAAGGCTGGTTCTATGACAGAGAAGATCAAGAAGGCGGTTGATTCATACAACACAGAAAGAGCATTTCGGAAGATCAAGCGCCATACGTCTTCTGTCCCCATGGATGTTGATAGAGGTGCTTCTAATATAGGTGTGCAGCAAAACTCTTCTTCTGTTAATCATATGGAGAGATTAAAGCGGATGTCTGAGGAAGGAGTTGCAAATCAAAGTGAGGGTGCTGCAGGTGAAACTGAATTATCAGAAAAAAGACAAACTAATAAGGGTAATGAAGATGCGAAGAATTTTACTGGAGGCCCCTCAAGTTGGTATGGGATGTCGATGCCTAATCAGAAACCAGAGGACTCAAAAGGTGAGGAAACAACCAGTGAAGCCATGCCAGAGGAACCTCCTGAAGATATTAATCCAATGCCTTCATCCATTGAGGGAGCTGAAACCGCAGAGCGAACAAATGGAGAGAAAACCTTGAAGGATGCTGTGAAGCCCAAGAACAAGAGACCTAGGAAAAAGAACGGCTCCTCTACTGGTCCAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000176 GO:0000177 GO:0000178 GO:0000184 GO:0000288 GO:0000291 GO:0000459 GO:0000460 GO:0000466 GO:0000467 GO:0000469 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016075 GO:0016078 GO:0016180 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0017091 GO:0019222 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031974 GO:0031981 GO:0032991 GO:0034427 GO:0034470 GO:0034472 GO:0034473 GO:0034475 GO:0034476 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0043632 GO:0043633 GO:0043634 GO:0043928 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0070478 GO:0070481 GO:0070651 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071035 GO:0071038 GO:0071042 GO:0071046 GO:0071047 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1905354
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RNase_PH RNase_PH_C

Protein Analysis

442

Amino Acids

48.29

Weight (kDa)

5.61

Isoelectric Point (pI)

50.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNase_PH PF01138 37 - 168 4.1e-29 3' exoribonuclease family, domain 1
RNase_PH_C PF03725 197 - 263 8.6e-15 3' exoribonuclease family, domain 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 764
AarI CACCTGC 1 cut(s) 1004
Acc36I ACCTGC 1 cut(s) 1004
AccBSI CCGCTC 2 cut(s) 65, 359
AccII CGCG 3 cut(s) 219, 327, 339
AccIII TCCGGA 1 cut(s) 495
AclWI GGATC 1 cut(s) 641
AcoI YGGCCR 4 cut(s) 91, 183, 270, 322
AcsI RAATTY 1 cut(s) 1072
AcuI CTGAAG 1 cut(s) 1203
AfaI GTAC 1 cut(s) 546
AfiI CCNNNNNNNGG 2 cut(s) 233, 1095
AgsI TTSAA 3 cut(s) 622, 728, 1258
AjnI CCWGG 1 cut(s) 289
AluBI AGCT 6 cut(s) 163, 202, 319, 734, 1220, 1323
AluI AGCT 6 cut(s) 163, 202, 319, 734, 1220, 1323
Alw21I GWGCWC 1 cut(s) 321
Alw26I GTCTC 2 cut(s) 53, 1279
AlwI GGATC 1 cut(s) 641
Aor13HI TCCGGA 1 cut(s) 495
ApeKI GCWGC 5 cut(s) 458, 470, 479, 928, 1010
ApoI RAATTY 1 cut(s) 1072
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AseI ATTAAT 2 cut(s) 699, 1191
Asp700I GAANNNNTTC 2 cut(s) 50, 784
AspA2I CCTAGG 1 cut(s) 1289
AspLEI GCGC 1 cut(s) 873
AspS9I GGNCC 6 cut(s) 99, 157, 166, 225, 1085, 1316
AsuC2I CCSGG 1 cut(s) 300
AsuHPI GGTGA 4 cut(s) 112, 652, 1028, 1154
AvaII GGWCC 2 cut(s) 157, 1316
AvrII CCTAGG 1 cut(s) 1289
AxyI CCTNAGG 1 cut(s) 555
BalI TGGCCA 1 cut(s) 185
BanII GRGCYC 2 cut(s) 149, 321
BarI GAAGNNNNNNTAC 2 cut(s) 528, 560
BbsI GAAGAC 1 cut(s) 873
Bbv12I GWGCWC 1 cut(s) 321
BbvI GCAGC 5 cut(s) 445, 466, 482, 940, 997
BccI CCATC 3 cut(s) 131, 194, 254
BceAI ACGGC 4 cut(s) 106, 250, 296, 1318
BciT130I CCWGG 1 cut(s) 291
BclI TGATCA 1 cut(s) 579
BcnI CCSGG 1 cut(s) 300
BcoDI GTCTC 2 cut(s) 53, 1279
BfaI CTAG 2 cut(s) 1290, 1324
BfmI CTRYAG 1 cut(s) 1011
BfoI RGCGCY 1 cut(s) 874
BfuAI ACCTGC 1 cut(s) 1004
BglI GCCNNNNNGGC 1 cut(s) 300
BisI GCNGC 8 cut(s) 94, 295, 325, 459, 471, 480, 929, 1011
BlnI CCTAGG 1 cut(s) 1289
BlsI GCNGC 8 cut(s) 95, 296, 326, 460, 472, 481, 930, 1012
Bme1390I CCNGG 2 cut(s) 291, 300
Bme18I GGWCC 2 cut(s) 157, 1316
BmgT120I GGNCC 6 cut(s) 99, 157, 166, 225, 1085, 1316
BmiI GGNNCC 4 cut(s) 567, 1087, 1176, 1306
BmrFI CCNGG 2 cut(s) 291, 300
BmsI GCATC 5 cut(s) 37, 445, 1054, 1101, 1252
BoxI GACNNNNGTC 1 cut(s) 339
BpiI GAAGAC 1 cut(s) 873
BpmI CTGGAG 2 cut(s) 756, 1101
BpuEI CTTGAG 1 cut(s) 1075
BpuMI CCSGG 1 cut(s) 300
BsaAI YACGTR 1 cut(s) 178
BsaBI GATNNNNATC 1 cut(s) 1191
BsaI GGTCTC 2 cut(s) 53, 1279
BsaJI CCNNGG 5 cut(s) 298, 337, 513, 891, 1289
BsaWI WCCGGW 1 cut(s) 495
BsaXI ACNNNNNCTCC 2 cut(s) 576, 606
Bsc4I CCNNNNNNNGG 2 cut(s) 233, 1095
Bse118I RCCGGY 1 cut(s) 96
Bse1I ACTGG 3 cut(s) 1084, 1155, 1318
Bse21I CCTNAGG 1 cut(s) 555
Bse3DI GCAATG 2 cut(s) 465, 776
Bse8I GATNNNNATC 1 cut(s) 1191
BseAI TCCGGA 1 cut(s) 495
BseBI CCWGG 1 cut(s) 291
BseDI CCNNGG 5 cut(s) 298, 337, 513, 891, 1289
BseGI GGATG 6 cut(s) 547, 901, 978, 1110, 1205, 1267
BseJI GATNNNNATC 1 cut(s) 1191
BseLI CCNNNNNNNGG 2 cut(s) 233, 1095
BseMI GCAATG 2 cut(s) 465, 776
BseMII CTCAG 3 cut(s) 246, 546, 969
BseNI ACTGG 3 cut(s) 1084, 1155, 1318
BseRI GAGGAG 2 cut(s) 572, 1297
BseX3I CGGCCG 2 cut(s) 91, 322
BseXI GCAGC 5 cut(s) 445, 466, 482, 940, 997
BseYI CCCAGC 2 cut(s) 163, 198
BsgI GTGCAG 1 cut(s) 947
Bsh1236I CGCG 3 cut(s) 219, 327, 339
Bsh1285I CGRYCG 3 cut(s) 94, 325, 337
BsiEI CGRYCG 3 cut(s) 94, 325, 337
BsiHKAI GWGCWC 1 cut(s) 321
BsiSI CCGG 3 cut(s) 97, 300, 496
BslFI GGGAC 1 cut(s) 872
BslI CCNNNNNNNGG 2 cut(s) 233, 1095
BsmAI GTCTC 2 cut(s) 53, 1279
BsmFI GGGAC 1 cut(s) 872
BsmI GAATGC 1 cut(s) 614
Bso31I GGTCTC 2 cut(s) 53, 1279
Bsp1286I GDGCHC 2 cut(s) 149, 321
Bsp13I TCCGGA 1 cut(s) 495
Bsp1407I TGTACA 1 cut(s) 544
Bsp143I GATC 5 cut(s) 418, 579, 646, 816, 864
Bsp19I CCATGG 1 cut(s) 891
BspCNI CTCAG 3 cut(s) 247, 547, 970
BspEI TCCGGA 1 cut(s) 495
BspFNI CGCG 3 cut(s) 219, 327, 339
BspLI GGNNCC 4 cut(s) 567, 1087, 1176, 1306
BspMAI CTGCAG 1 cut(s) 1015
BspMI ACCTGC 1 cut(s) 1004
BspPI GGATC 1 cut(s) 641
BspTNI GGTCTC 2 cut(s) 53, 1279
BsrBI CCGCTC 2 cut(s) 65, 359
BsrDI GCAATG 2 cut(s) 465, 776
BsrFI RCCGGY 1 cut(s) 96
BsrGI TGTACA 1 cut(s) 544
BsrI ACTGG 3 cut(s) 1084, 1155, 1318
BssAI RCCGGY 1 cut(s) 96
BssECI CCNNGG 5 cut(s) 298, 337, 513, 891, 1289
BssMI GATC 5 cut(s) 418, 579, 646, 816, 864
BssT1I CCWWGG 3 cut(s) 513, 891, 1289
Bst2UI CCWGG 1 cut(s) 291
Bst4CI ACNGT 2 cut(s) 113, 544
Bst6I CTCTTC 3 cut(s) 135, 657, 943
BstAPI GCANNNNNTGC 2 cut(s) 479, 775
BstAUI TGTACA 1 cut(s) 544
BstBAI YACGTR 1 cut(s) 178
BstC8I GCNNGC 1 cut(s) 98
BstDEI CTNAG 4 cut(s) 255, 344, 555, 978
BstDSI CCRYGG 2 cut(s) 337, 891
BstF5I GGATG 6 cut(s) 547, 901, 978, 1110, 1205, 1267
BstFNI CGCG 3 cut(s) 219, 327, 339
BstH2I RGCGCY 1 cut(s) 874
BstHHI GCGC 1 cut(s) 873
BstKTI GATC 5 cut(s) 421, 582, 649, 819, 867
BstMAI GTCTC 2 cut(s) 53, 1279
BstMBI GATC 5 cut(s) 418, 579, 646, 816, 864
BstMCI CGRYCG 3 cut(s) 94, 325, 337
BstMWI GCNNNNNNNGC 9 cut(s) 34, 71, 208, 300, 467, 476, 479, 775, 1226
BstNI CCWGG 1 cut(s) 291
BstPAI GACNNNNGTC 1 cut(s) 339
BstSCI CCNGG 2 cut(s) 289, 298
BstSFI CTRYAG 1 cut(s) 1011
BstUI CGCG 3 cut(s) 219, 327, 339
BstV1I GCAGC 5 cut(s) 445, 466, 482, 940, 997
BstV2I GAAGAC 1 cut(s) 873
BstX2I RGATCY 1 cut(s) 646
BstYI RGATCY 1 cut(s) 646
BstZI CGGCCG 2 cut(s) 91, 322
Bsu36I CCTNAGG 1 cut(s) 555
BtgI CCRYGG 2 cut(s) 337, 891
BtgZI GCGATG 1 cut(s) 9
BtsCI GGATG 6 cut(s) 547, 901, 978, 1110, 1205, 1267
BtsI GCAGTG 1 cut(s) 192
BtsIMutI CAGTG 3 cut(s) 192, 252, 1162
BveI ACCTGC 1 cut(s) 1004
Cac8I GCNNGC 1 cut(s) 98
CfoI GCGC 1 cut(s) 873
Cfr10I RCCGGY 1 cut(s) 96
Cfr13I GGNCC 6 cut(s) 99, 157, 166, 225, 1085, 1316
Cfr42I CCGCGG 1 cut(s) 340
Csp6I GTAC 1 cut(s) 545
CviAII CATG 3 cut(s) 656, 892, 1165
CviQI GTAC 1 cut(s) 545
DdeI CTNAG 4 cut(s) 255, 344, 555, 978
DpnI GATC 5 cut(s) 420, 581, 648, 818, 866
DpnII GATC 5 cut(s) 418, 579, 646, 816, 864
EaeI YGGCCR 4 cut(s) 91, 183, 270, 322
EagI CGGCCG 2 cut(s) 91, 322
Eam1104I CTCTTC 3 cut(s) 135, 657, 943
EarI CTCTTC 3 cut(s) 135, 657, 943
EciI GGCGGA 1 cut(s) 167
Ecl136II GAGCTC 1 cut(s) 319
EclXI CGGCCG 2 cut(s) 91, 322
Eco130I CCWWGG 3 cut(s) 513, 891, 1289
Eco147I AGGCCT 1 cut(s) 502
Eco24I GRGCYC 2 cut(s) 149, 321
Eco31I GGTCTC 2 cut(s) 53, 1279
Eco47I GGWCC 2 cut(s) 157, 1316
Eco52I CGGCCG 2 cut(s) 91, 322
Eco53kI GAGCTC 1 cut(s) 319
Eco57I CTGAAG 1 cut(s) 1203
Eco81I CCTNAGG 1 cut(s) 555
EcoICRI GAGCTC 1 cut(s) 319
EcoO109I RGGNCCY 1 cut(s) 1085
EcoRII CCWGG 1 cut(s) 289
EcoT14I CCWWGG 3 cut(s) 513, 891, 1289
EcoT38I GRGCYC 2 cut(s) 149, 321
ErhI CCWWGG 3 cut(s) 513, 891, 1289
FaeI CATG 3 cut(s) 659, 895, 1168
FaqI GGGAC 1 cut(s) 872
FatI CATG 3 cut(s) 655, 891, 1164
FauNDI CATATG 1 cut(s) 954
FbaI TGATCA 1 cut(s) 579
Fnu4HI GCNGC 8 cut(s) 94, 295, 325, 459, 471, 480, 929, 1011
FokI GGATG 6 cut(s) 534, 908, 985, 1117, 1192, 1274
FriOI GRGCYC 2 cut(s) 149, 321
Fsp4HI GCNGC 8 cut(s) 94, 295, 325, 459, 471, 480, 929, 1011
FspBI CTAG 2 cut(s) 1290, 1324
GlaI GCGC 1 cut(s) 872
GluI GCNGC 8 cut(s) 94, 295, 325, 459, 471, 480, 929, 1011
GsaI CCCAGC 2 cut(s) 167, 202
GsuI CTGGAG 2 cut(s) 756, 1101
HaeII RGCGCY 1 cut(s) 874
HapII CCGG 3 cut(s) 97, 300, 496
HhaI GCGC 1 cut(s) 873
Hin1II CATG 3 cut(s) 659, 895, 1168
Hin6I GCGC 1 cut(s) 871
HinP1I GCGC 1 cut(s) 871
HincII GTYRAC 1 cut(s) 489
HindII GTYRAC 1 cut(s) 489
HinfI GANTC 4 cut(s) 305, 371, 833, 1133
HpaII CCGG 3 cut(s) 97, 300, 496
HphI GGTGA 4 cut(s) 112, 652, 1028, 1154
Hpy166II GTNNAC 1 cut(s) 489
Hpy188I TCNGA 6 cut(s) 83, 579, 861, 979, 1033, 1122
Hpy188III TCNNGA 5 cut(s) 58, 496, 533, 820, 1181
Hpy8I GTNNAC 1 cut(s) 489
Hpy99I CGWCG 2 cut(s) 92, 317
HpyAV CCTTC 6 cut(s) 112, 288, 817, 977, 1212, 1252
HpyCH4III ACNGT 2 cut(s) 113, 544
HpyCH4IV ACGT 3 cut(s) 177, 491, 878
HpyCH4V TGCA 8 cut(s) 470, 614, 704, 754, 769, 928, 992, 1013
HpyF10VI GCNNNNNNNGC 9 cut(s) 34, 71, 208, 300, 467, 476, 479, 775, 1226
HpyF3I CTNAG 4 cut(s) 255, 344, 555, 978
HpySE526I ACGT 3 cut(s) 177, 491, 878
Hsp92II CATG 3 cut(s) 659, 895, 1168
HspAI GCGC 1 cut(s) 871
Kpn2I TCCGGA 1 cut(s) 495
KroI GCCGGC 1 cut(s) 96
KroNI GCCGGC 1 cut(s) 98
Ksp22I TGATCA 1 cut(s) 579
KspI CCGCGG 1 cut(s) 340
Kzo9I GATC 5 cut(s) 418, 579, 646, 816, 864
LmnI GCTCC 4 cut(s) 4, 565, 1217, 1310
Lsp1109I GCAGC 5 cut(s) 445, 466, 482, 940, 997
LweI GCATC 5 cut(s) 37, 445, 1054, 1101, 1252
MaeI CTAG 2 cut(s) 1290, 1324
MaeII ACGT 3 cut(s) 177, 491, 878
MaeIII GTNAC 3 cut(s) 113, 538, 604
MalI GATC 5 cut(s) 420, 581, 648, 818, 866
MbiI CCGCTC 2 cut(s) 65, 359
MboI GATC 5 cut(s) 418, 579, 646, 816, 864
MflI RGATCY 1 cut(s) 646
MhlI GDGCHC 2 cut(s) 149, 321
MlsI TGGCCA 1 cut(s) 185
MluCI AATT 5 cut(s) 622, 696, 780, 1025, 1072
MluNI TGGCCA 1 cut(s) 185
MlyI GAGTC 2 cut(s) 314, 1127
MmeI TCCRAC 1 cut(s) 674
Mox20I TGGCCA 1 cut(s) 185
MroI TCCGGA 1 cut(s) 495
MroNI GCCGGC 1 cut(s) 96
MroXI GAANNNNTTC 2 cut(s) 50, 784
MscI TGGCCA 1 cut(s) 185
MseI TTAA 5 cut(s) 699, 792, 948, 965, 1191
Msp20I TGGCCA 1 cut(s) 185
MspA1I CMGCKG 2 cut(s) 163, 339
MspI CCGG 3 cut(s) 97, 300, 496
MspR9I CCNGG 2 cut(s) 291, 300
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 1 cut(s) 291
MvnI CGCG 3 cut(s) 219, 327, 339
MwoI GCNNNNNNNGC 9 cut(s) 34, 71, 208, 300, 467, 476, 479, 775, 1226
NaeI GCCGGC 1 cut(s) 98
NciI CCSGG 1 cut(s) 300
NcoI CCATGG 1 cut(s) 891
NdeI CATATG 1 cut(s) 954
NdeII GATC 5 cut(s) 418, 579, 646, 816, 864
NgoMIV GCCGGC 1 cut(s) 96
NlaIII CATG 3 cut(s) 659, 895, 1168
NlaIV GGNNCC 4 cut(s) 567, 1087, 1176, 1306
NmeAIII GCCGAG 3 cut(s) 128, 300, 380
NmuCI GTSAC 1 cut(s) 538
PaqCI CACCTGC 1 cut(s) 1004
PceI AGGCCT 1 cut(s) 502
PctI GAATGC 1 cut(s) 614
PdiI GCCGGC 1 cut(s) 98
PdmI GAANNNNTTC 2 cut(s) 50, 784
PfeI GAWTC 2 cut(s) 371, 833
PkrI GCNGC 8 cut(s) 95, 296, 326, 460, 472, 481, 930, 1012
PleI GAGTC 2 cut(s) 313, 1127
PpsI GAGTC 2 cut(s) 313, 1127
Ppu21I YACGTR 1 cut(s) 178
PshAI GACNNNNGTC 1 cut(s) 339
PshBI ATTAAT 2 cut(s) 699, 1191
PsiI TTATAA 1 cut(s) 764
Psp124BI GAGCTC 1 cut(s) 321
Psp6I CCWGG 1 cut(s) 289
PspFI CCCAGC 2 cut(s) 163, 198
PspGI CCWGG 1 cut(s) 289
PspN4I GGNNCC 4 cut(s) 567, 1087, 1176, 1306
PspPI GGNCC 6 cut(s) 99, 157, 166, 225, 1085, 1316
PstI CTGCAG 1 cut(s) 1015
PsuI RGATCY 1 cut(s) 646
PvuII CAGCTG 1 cut(s) 163
RsaI GTAC 1 cut(s) 546
RsaNI GTAC 1 cut(s) 545
SacI GAGCTC 1 cut(s) 321
SacII CCGCGG 1 cut(s) 340
SaqAI TTAA 5 cut(s) 699, 792, 948, 965, 1191
SatI GCNGC 8 cut(s) 94, 295, 325, 459, 471, 480, 929, 1011
Sau3AI GATC 5 cut(s) 418, 579, 646, 816, 864
Sau96I GGNCC 6 cut(s) 99, 157, 166, 225, 1085, 1316
SchI GAGTC 2 cut(s) 314, 1127
ScrFI CCNGG 2 cut(s) 291, 300
SduI GDGCHC 2 cut(s) 149, 321
SfaNI GCATC 5 cut(s) 37, 445, 1054, 1101, 1252
SfcI CTRYAG 1 cut(s) 1011
Sfr303I CCGCGG 1 cut(s) 340
SgrBI CCGCGG 1 cut(s) 340
SinI GGWCC 2 cut(s) 157, 1316
SmlI CTYRAG 1 cut(s) 1090
SmoI CTYRAG 1 cut(s) 1090
Sse9I AATT 5 cut(s) 622, 696, 780, 1025, 1072
SseBI AGGCCT 1 cut(s) 502
SspMI CTAG 2 cut(s) 1290, 1324
SstI GAGCTC 1 cut(s) 321
StuI AGGCCT 1 cut(s) 502
StyD4I CCNGG 2 cut(s) 289, 298
StyI CCWWGG 3 cut(s) 513, 891, 1289
TaaI ACNGT 2 cut(s) 113, 544
TaiI ACGT 3 cut(s) 180, 494, 881
TaqI TCGA 5 cut(s) 57, 105, 315, 333, 1109
TasI AATT 5 cut(s) 622, 696, 780, 1025, 1072
TatI WGTACW 1 cut(s) 544
TauI GCSGC 3 cut(s) 96, 297, 327
TfiI GAWTC 2 cut(s) 371, 833
Tru1I TTAA 5 cut(s) 699, 792, 948, 965, 1191
Tru9I TTAA 5 cut(s) 699, 792, 948, 965, 1191
TscAI CASTG 3 cut(s) 199, 259, 1162
TseFI GTSAC 1 cut(s) 538
TseI GCWGC 5 cut(s) 458, 470, 479, 928, 1010
Tsp45I GTSAC 1 cut(s) 538
TspDTI ATGAA 5 cut(s) 43, 563, 825, 1074, 1194
TspRI CASTG 3 cut(s) 199, 259, 1162
VpaK11BI GGWCC 2 cut(s) 157, 1316
VspI ATTAAT 2 cut(s) 699, 1191
XapI RAATTY 1 cut(s) 1072
XmaJI CCTAGG 1 cut(s) 1289
XmnI GAANNNNTTC 2 cut(s) 50, 784
XspI CTAG 2 cut(s) 1290, 1324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.