Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003579.1

Orthogroup ID

OG0003830

Physical Location & Seq

Genomic Coordinates Reverse (-)

52919 .. 58094

Gene Structure 5176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003579.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1401 bp

atggagcagagaatggcgaacacgtggcggatgacggtgaacgagaagaagttcatcgagacggcattggagtcggggctccgaatcgacggccggcgtcccttcgactaccgtaagctcgaaatcaagttcgggaaagacgagggctccgcggaggtccacctcggccaaactcatgtgatggccttcgtcacggcccagctcgtccagccctaccgggacaggcccaacgacggcaccctctccatcttcaccgagttctctcccatggccgacccttcctttgagcctggccgccccggcgagtccgccgtcgagctcggccgcgttattgaccgcggtctcagggagagccgggcagttgatacagagtcgctttgtattctctctgggaaattagtatgggctatacgtgttgatctccacattctagataatggagggaatcttattgatgctgctaatattgctgcactggctggtttgttgacgttccggaggcctgagtgctcattagggggagaaaatggtcaggaagtcatcatacatccacccgaggagagagagccacttcatctaatagtacatcatctccctattgcagtaacttttgcattcttcagttatgagagcagtgtggttatagatccaacccaccatgaagaggctgttatggggggacgaatgaccgctacacttaattctaatggtgatgtttgtgccattcagaaggctggaggggaggccatcttgcagggtgttataatgcaatgtttgcgaattgctgctgccaaggctggtgccatctcagatatgataaagaaagaggttgattcatataacacaaaaagagcattactgaagatcaagcgtcattctactcccagggatgtagatagaggtgcttctgacatagggctgaaacagaactcctctgttgaccagatgagactcgatgaatttccagggcatcatgtgcagagaataaagcaggagtgtgaggaaggcattgccaagcaaagcggggatgttgaaagtgaaactaaattgtcagacaaaacgcaaactaacaggagtaatgaggatacaaagaatttcattgggggcccctcaagttgggatccttactctgtgggtgttgattcagattccttgaaagcttctctagcttcccaaggtatgccaatgcctattgagaaacaaaaggactcaaaaggtgaggaaacaagaagtgaagccaagccagaggatgctcctgaaaataacaatccaaagacttcaccccttagggaagctgaatctgccgaacgagcaaatggagagaaaaccctgaaggatgctgtaaaggcgaagaacaggaaatccaggagaaagagtcactcctcttctggtcctagctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000175 GO:0000176 GO:0000177 GO:0000178 GO:0000184 GO:0000288 GO:0000291 GO:0000459 GO:0000460 GO:0000466 GO:0000467 GO:0000469 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016075 GO:0016078 GO:0016180 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0017091 GO:0019222 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031974 GO:0031981 GO:0032991 GO:0034427 GO:0034470 GO:0034472 GO:0034473 GO:0034475 GO:0034476 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0043632 GO:0043633 GO:0043634 GO:0043928 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0070478 GO:0070481 GO:0070651 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071035 GO:0071038 GO:0071042 GO:0071046 GO:0071047 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1905354

KEGG Pathways

Metabolic & Signaling

ko03018 map03018

Pfam Domains

Protein Families

RNase_PH RNase_PH_C

Protein Analysis

466

Amino Acids

51.25

Weight (kDa)

6.07

Isoelectric Point (pI)

45.01

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003830)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12990 AT3G12990 AT3G12990 AT3G12990 AT3G60500 AT3G60500 AT3G60500 AT3G60500
fragaria_vesca	FvH4_1g30010 FvH4_1g30010
malus_domestica	MD03G1172100.v1.1 MD11G1189800.v1.1
prunus_persica	Prupe.4G254800_v2.0.a1 Prupe.4G254800_v2.0.a1 Prupe.4G254800_v2.0.a1
pyrus_communis	pycom03g12920
rosa_chinensis	RchiOBHm_Chr2g0134251 RchiOBHm_Chr3g0492251
rosa_laevigata	RLG00000022789
rosa_multiflora	Rmu_sc0000418.1_g000008 Rmu_sc0002530.1_g000013 Rmu_sc0003579.1_g000006
rosa_roxburghii	Rroxscaffold_6G00392470
rosa_rugosa	Rorug02G0315300 Rorug03G0252700
rosa_samantha	Rh2AG367900 Rh2BG374300 Rh2CG351900 Rh2DG391500 Rh3AG302700 Rh3BG338700 Rh3CG335800 Rh3DG337900
rosa_wichuraiana	Rw3G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	764
AccB1I	GGYRCC	2 cut(s)	236, 800
AccII	CGCG	3 cut(s)	152, 327, 339
AccIII	TCCGGA	1 cut(s)	495
AclWI	GGATC	3 cut(s)	641, 1115, 1128
AcoI	YGGCCR	5 cut(s)	91, 166, 270, 292, 322
AcsI	RAATTY	2 cut(s)	959, 1093
AcuI	CTGAAG	3 cut(s)	604, 881, 1352
AcvI	CACGTG	1 cut(s)	24
AcyI	GRCGYC	1 cut(s)	97
AfaI	GTAC	1 cut(s)	585
AfiI	CCNNNNNNNGG	3 cut(s)	233, 664, 1116
AflIII	ACRYGT	2 cut(s)	21, 412
AgsI	TTSAA	2 cut(s)	1034, 1156
AjnI	CCWGG	4 cut(s)	289, 884, 964, 1364
AloI	GAACNNNNNNTCC	2 cut(s)	1346, 1378
AluBI	AGCT	7 cut(s)	118, 202, 319, 1160, 1169, 1295, 1398
AluI	AGCT	7 cut(s)	118, 202, 319, 1160, 1169, 1295, 1398
Alw21I	GWGCWC	2 cut(s)	321, 512
Alw26I	GTCTC	3 cut(s)	53, 347, 943
AlwI	GGATC	3 cut(s)	641, 1115, 1128
Ama87I	CYCGRG	1 cut(s)	554
Aor13HI	TCCGGA	1 cut(s)	495
ApaI	GGGCCC	1 cut(s)	1109
ApeKI	GCWGC	4 cut(s)	458, 470, 785, 788
ApoI	RAATTY	2 cut(s)	959, 1093
ArsI	GACNNNNNNTTYG	2 cut(s)	266, 298
Asp700I	GAANNNNTTC	1 cut(s)	50
AspS9I	GGNCC	6 cut(s)	157, 196, 225, 1105, 1106, 1391
AsuC2I	CCSGG	3 cut(s)	218, 300, 356
AsuHPI	GGTGA	5 cut(s)	49, 244, 722, 1229, 1272
AvaI	CYCGRG	1 cut(s)	554
AvaII	GGWCC	2 cut(s)	157, 1391
AxyI	CCTNAGG	1 cut(s)	1286
BaeGI	GKGCMC	1 cut(s)	1109
BamHI	GGATCC	1 cut(s)	1120
BanI	GGYRCC	2 cut(s)	236, 800
BanII	GRGCYC	4 cut(s)	81, 149, 321, 1109
BarI	GAAGNNNNNNTAC	2 cut(s)	528, 560
BbrPI	CACGTG	1 cut(s)	24
Bbv12I	GWGCWC	2 cut(s)	321, 512
BbvI	GCAGC	4 cut(s)	445, 457, 772, 775
BccI	CCATC	4 cut(s)	175, 254, 755, 812
BceAI	ACGGC	5 cut(s)	78, 106, 210, 250, 296
BcgI	CGANNNNNNTGC	2 cut(s)	54, 88
BciT130I	CCWGG	4 cut(s)	291, 886, 966, 1366
BciVI	GTATCC	1 cut(s)	1078
BcnI	CCSGG	3 cut(s)	218, 300, 356
BcoDI	GTCTC	3 cut(s)	53, 347, 943
BfaI	CTAG	4 cut(s)	431, 1166, 1395, 1399
BfuI	GTATCC	1 cut(s)	1078
BglI	GCCNNNNNGGC	1 cut(s)	300
BisI	GCNGC	6 cut(s)	295, 325, 459, 471, 786, 789
BlsI	GCNGC	6 cut(s)	296, 326, 460, 472, 787, 790
Bme1390I	CCNGG	7 cut(s)	218, 291, 300, 356, 886, 966, 1366
Bme18I	GGWCC	2 cut(s)	157, 1391
BmeT110I	CYCGRG	1 cut(s)	554
BmgT120I	GGNCC	6 cut(s)	157, 196, 225, 1105, 1106, 1391
BmiI	GGNNCC	8 cut(s)	80, 148, 238, 802, 1106, 1107, 1108, 1122
BmrFI	CCNGG	7 cut(s)	218, 291, 300, 356, 886, 966, 1366
BmsI	GCATC	4 cut(s)	445, 979, 1240, 1327
BoxI	GACNNNNGTC	1 cut(s)	339
BpmI	CTGGAG	1 cut(s)	756
BpuEI	CTTGAG	1 cut(s)	1096
BpuMI	CCSGG	3 cut(s)	218, 300, 356
BsaAI	YACGTR	2 cut(s)	24, 413
BsaHI	GRCGYC	1 cut(s)	97
BsaI	GGTCTC	1 cut(s)	347
BsaWI	WCCGGW	1 cut(s)	495
BsaXI	ACNNNNNCTCC	6 cut(s)	131, 161, 576, 606, 1360, 1390
Bsc4I	CCNNNNNNNGG	3 cut(s)	233, 664, 1116
Bse118I	RCCGGY	1 cut(s)	93
Bse1I	ACTGG	1 cut(s)	480
Bse21I	CCTNAGG	1 cut(s)	1286
Bse3DI	GCAATG	2 cut(s)	776, 1008
BseAI	TCCGGA	1 cut(s)	495
BseBI	CCWGG	4 cut(s)	291, 886, 966, 1366
BseGI	GGATG	6 cut(s)	36, 547, 895, 1033, 1255, 1342
BseLI	CCNNNNNNNGG	3 cut(s)	233, 664, 1116
BseMI	GCAATG	2 cut(s)	776, 1008
BseMII	CTCAG	3 cut(s)	358, 495, 822
BseNI	ACTGG	1 cut(s)	480
BseRI	GAGGAG	3 cut(s)	572, 922, 1372
BseSI	GKGCMC	1 cut(s)	1109
BseX3I	CGGCCG	2 cut(s)	91, 322
BseXI	GCAGC	4 cut(s)	445, 457, 772, 775
BseYI	CCCAGC	1 cut(s)	198
BsgI	GTGCAG	2 cut(s)	456, 998
Bsh1236I	CGCG	3 cut(s)	152, 327, 339
Bsh1285I	CGRYCG	2 cut(s)	94, 325
BshNI	GGYRCC	2 cut(s)	236, 800
BsiEI	CGRYCG	2 cut(s)	94, 325
BsiHKAI	GWGCWC	2 cut(s)	321, 512
BsiHKCI	CYCGRG	1 cut(s)	554
BsiSI	CCGG	5 cut(s)	94, 217, 300, 355, 496
BslFI	GGGAC	3 cut(s)	84, 233, 693
BslI	CCNNNNNNNGG	3 cut(s)	233, 664, 1116
BsmAI	GTCTC	3 cut(s)	53, 347, 943
BsmBI	CGTCTC	1 cut(s)	53
BsmFI	GGGAC	3 cut(s)	84, 233, 693
BsmI	GAATGC	1 cut(s)	614
Bso31I	GGTCTC	1 cut(s)	347
BsoBI	CYCGRG	1 cut(s)	554
Bsp120I	GGGCCC	1 cut(s)	1105
Bsp1286I	GDGCHC	5 cut(s)	81, 149, 321, 512, 1109
Bsp13I	TCCGGA	1 cut(s)	495
Bsp143I	GATC	4 cut(s)	418, 646, 864, 1120
Bsp19I	CCATGG	1 cut(s)	267
BspCNI	CTCAG	3 cut(s)	357, 496, 821
BspEI	TCCGGA	1 cut(s)	495
BspFNI	CGCG	3 cut(s)	152, 327, 339
BspLI	GGNNCC	8 cut(s)	80, 148, 238, 802, 1106, 1107, 1108, 1122
BspPI	GGATC	3 cut(s)	641, 1115, 1128
BspT107I	GGYRCC	2 cut(s)	236, 800
BspTNI	GGTCTC	1 cut(s)	347
BsrDI	GCAATG	2 cut(s)	776, 1008
BsrFI	RCCGGY	1 cut(s)	93
BsrI	ACTGG	1 cut(s)	480
BssAI	RCCGGY	1 cut(s)	93
BssMI	GATC	4 cut(s)	418, 646, 864, 1120
BssNI	GRCGYC	1 cut(s)	97
BssT1I	CCWWGG	3 cut(s)	267, 792, 1174
Bst2UI	CCWGG	4 cut(s)	291, 886, 966, 1366
Bst4CI	ACNGT	2 cut(s)	37, 113
Bst6I	CTCTTC	2 cut(s)	657, 1390
BstACI	GRCGYC	1 cut(s)	97
BstAPI	GCANNNNNTGC	2 cut(s)	775, 976
BstBAI	YACGTR	2 cut(s)	24, 413
BstC8I	GCNNGC	1 cut(s)	95
BstDEI	CTNAG	4 cut(s)	344, 504, 808, 1286
BstDSI	CCRYGG	3 cut(s)	150, 267, 337
BstF5I	GGATG	6 cut(s)	36, 547, 895, 1033, 1255, 1342
BstFNI	CGCG	3 cut(s)	152, 327, 339
BstKTI	GATC	4 cut(s)	421, 649, 867, 1123
BstMAI	GTCTC	3 cut(s)	53, 347, 943
BstMBI	GATC	4 cut(s)	418, 646, 864, 1120
BstMCI	CGRYCG	2 cut(s)	94, 325
BstNI	CCWGG	4 cut(s)	291, 886, 966, 1366
BstPAI	GACNNNNGTC	1 cut(s)	339
BstSCI	CCNGG	7 cut(s)	216, 289, 298, 354, 884, 964, 1364
BstSLI	GKGCMC	1 cut(s)	1109
BstUI	CGCG	3 cut(s)	152, 327, 339
BstV1I	GCAGC	4 cut(s)	445, 457, 772, 775
BstX2I	RGATCY	2 cut(s)	646, 1120
BstYI	RGATCY	2 cut(s)	646, 1120
BstZI	CGGCCG	2 cut(s)	91, 322
Bsu36I	CCTNAGG	1 cut(s)	1286
BsuI	GTATCC	1 cut(s)	1078
BtgI	CCRYGG	3 cut(s)	150, 267, 337
BtsCI	GGATG	6 cut(s)	36, 547, 895, 1033, 1255, 1342
BtsI	GCAGTG	1 cut(s)	640
BtsIMutI	CAGTG	2 cut(s)	473, 640
Cac8I	GCNNGC	1 cut(s)	95
Cfr10I	RCCGGY	1 cut(s)	93
Cfr13I	GGNCC	6 cut(s)	157, 196, 225, 1105, 1106, 1391
Cfr42I	CCGCGG	2 cut(s)	153, 340
CseI	GACGC	2 cut(s)	86, 860
Csp6I	GTAC	1 cut(s)	584
CviAII	CATG	4 cut(s)	176, 268, 659, 974
CviQI	GTAC	1 cut(s)	584
DdeI	CTNAG	4 cut(s)	344, 504, 808, 1286
DpnI	GATC	4 cut(s)	420, 648, 866, 1122
DpnII	GATC	4 cut(s)	418, 646, 864, 1120
EaeI	YGGCCR	5 cut(s)	91, 166, 270, 292, 322
EagI	CGGCCG	2 cut(s)	91, 322
Eam1104I	CTCTTC	2 cut(s)	657, 1390
EarI	CTCTTC	2 cut(s)	657, 1390
EciI	GGCGGA	2 cut(s)	43, 298
Ecl136II	GAGCTC	1 cut(s)	319
EclXI	CGGCCG	2 cut(s)	91, 322
Eco130I	CCWWGG	3 cut(s)	267, 792, 1174
Eco147I	AGGCCT	1 cut(s)	502
Eco24I	GRGCYC	4 cut(s)	81, 149, 321, 1109
Eco31I	GGTCTC	1 cut(s)	347
Eco47I	GGWCC	2 cut(s)	157, 1391
Eco52I	CGGCCG	2 cut(s)	91, 322
Eco53kI	GAGCTC	1 cut(s)	319
Eco57I	CTGAAG	3 cut(s)	604, 881, 1352
Eco72I	CACGTG	1 cut(s)	24
Eco81I	CCTNAGG	1 cut(s)	1286
Eco88I	CYCGRG	1 cut(s)	554
EcoICRI	GAGCTC	1 cut(s)	319
EcoO109I	RGGNCCY	2 cut(s)	1105, 1106
EcoRII	CCWGG	4 cut(s)	289, 884, 964, 1364
EcoT14I	CCWWGG	3 cut(s)	267, 792, 1174
EcoT38I	GRGCYC	4 cut(s)	81, 149, 321, 1109
ErhI	CCWWGG	3 cut(s)	267, 792, 1174
Esp3I	CGTCTC	1 cut(s)	53
FaeI	CATG	4 cut(s)	179, 271, 662, 977
FaqI	GGGAC	3 cut(s)	84, 233, 693
FatI	CATG	4 cut(s)	175, 267, 658, 973
FauI	CCCGC	1 cut(s)	1016
Fnu4HI	GCNGC	6 cut(s)	295, 325, 459, 471, 786, 789
FokI	GGATG	6 cut(s)	43, 534, 902, 1040, 1262, 1349
FriOI	GRGCYC	4 cut(s)	81, 149, 321, 1109
Fsp4HI	GCNGC	6 cut(s)	295, 325, 459, 471, 786, 789
FspBI	CTAG	4 cut(s)	431, 1166, 1395, 1399
GluI	GCNGC	6 cut(s)	295, 325, 459, 471, 786, 789
GsaI	CCCAGC	1 cut(s)	202
GsuI	CTGGAG	1 cut(s)	756
HapII	CCGG	5 cut(s)	94, 217, 300, 355, 496
HgaI	GACGC	2 cut(s)	86, 860
Hin1I	GRCGYC	1 cut(s)	97
Hin1II	CATG	4 cut(s)	179, 271, 662, 977
HincII	GTYRAC	2 cut(s)	489, 940
HindII	GTYRAC	2 cut(s)	489, 940
HindIII	AAGCTT	1 cut(s)	1158
HpaII	CCGG	5 cut(s)	94, 217, 300, 355, 496
HphI	GGTGA	5 cut(s)	49, 244, 722, 1229, 1272
Hpy166II	GTNNAC	4 cut(s)	40, 160, 489, 940
Hpy188I	TCNGA	6 cut(s)	83, 729, 811, 910, 1054, 1147
Hpy188III	TCNNGA	6 cut(s)	58, 133, 431, 496, 533, 1256
Hpy8I	GTNNAC	4 cut(s)	40, 160, 489, 940
Hpy99I	CGWCG	3 cut(s)	92, 236, 317
HpyAV	CCTTC	6 cut(s)	112, 196, 288, 724, 998, 1327
HpyCH4III	ACNGT	2 cut(s)	37, 113
HpyCH4IV	ACGT	3 cut(s)	23, 412, 491
HpyCH4V	TGCA	6 cut(s)	473, 602, 614, 754, 769, 979
HpyF3I	CTNAG	4 cut(s)	344, 504, 808, 1286
HpySE526I	ACGT	3 cut(s)	23, 412, 491
Hsp92I	GRCGYC	1 cut(s)	97
Hsp92II	CATG	4 cut(s)	179, 271, 662, 977
Kpn2I	TCCGGA	1 cut(s)	495
KroI	GCCGGC	1 cut(s)	93
KroNI	GCCGGC	1 cut(s)	95
KspI	CCGCGG	2 cut(s)	153, 340
Kzo9I	GATC	4 cut(s)	418, 646, 864, 1120
LmnI	GCTCC	4 cut(s)	4, 84, 152, 1258
Lsp1109I	GCAGC	4 cut(s)	445, 457, 772, 775
LweI	GCATC	4 cut(s)	445, 979, 1240, 1327
MaeI	CTAG	4 cut(s)	431, 1166, 1395, 1399
MaeII	ACGT	3 cut(s)	23, 412, 491
MaeIII	GTNAC	3 cut(s)	190, 604, 1376
MalI	GATC	4 cut(s)	420, 648, 866, 1122
MboI	GATC	4 cut(s)	418, 646, 864, 1120
MboII	GAAGA	7 cut(s)	58, 241, 610, 674, 874, 1363, 1377
MflI	RGATCY	2 cut(s)	646, 1120
MhlI	GDGCHC	5 cut(s)	81, 149, 321, 512, 1109
MluCI	AATT	6 cut(s)	395, 700, 780, 959, 1046, 1093
MlyI	GAGTC	6 cut(s)	80, 314, 380, 945, 1202, 1384
MmeI	TCCRAC	1 cut(s)	674
MroI	TCCGGA	1 cut(s)	495
MroNI	GCCGGC	1 cut(s)	93
MroXI	GAANNNNTTC	1 cut(s)	50
MseI	TTAA	1 cut(s)	699
MspA1I	CMGCKG	2 cut(s)	152, 339
MspI	CCGG	5 cut(s)	94, 217, 300, 355, 496
MspR9I	CCNGG	7 cut(s)	218, 291, 300, 356, 886, 966, 1366
Mva1269I	GAATGC	1 cut(s)	614
MvaI	CCWGG	4 cut(s)	291, 886, 966, 1366
MvnI	CGCG	3 cut(s)	152, 327, 339
NaeI	GCCGGC	1 cut(s)	95
NciI	CCSGG	3 cut(s)	218, 300, 356
NcoI	CCATGG	1 cut(s)	267
NdeII	GATC	4 cut(s)	418, 646, 864, 1120
NgoMIV	GCCGGC	1 cut(s)	93
NlaIII	CATG	4 cut(s)	179, 271, 662, 977
NlaIV	GGNNCC	8 cut(s)	80, 148, 238, 802, 1106, 1107, 1108, 1122
NmeAIII	GCCGAG	2 cut(s)	144, 300
NmuCI	GTSAC	2 cut(s)	190, 1376
PasI	CCCWGGG	1 cut(s)	885
PceI	AGGCCT	1 cut(s)	502
PcsI	WCGNNNNNNNCGW	1 cut(s)	138
PctI	GAATGC	1 cut(s)	614
PdiI	GCCGGC	1 cut(s)	95
PdmI	GAANNNNTTC	1 cut(s)	50
PfeI	GAWTC	6 cut(s)	84, 445, 833, 1142, 1148, 1298
PfoI	TCCNGGA	1 cut(s)	1364
PkrI	GCNGC	6 cut(s)	296, 326, 460, 472, 787, 790
PleI	GAGTC	6 cut(s)	79, 313, 379, 945, 1202, 1383
PmaCI	CACGTG	1 cut(s)	24
PmlI	CACGTG	1 cut(s)	24
PpsI	GAGTC	6 cut(s)	79, 313, 379, 945, 1202, 1383
Ppu21I	YACGTR	2 cut(s)	24, 413
PshAI	GACNNNNGTC	1 cut(s)	339
PsiI	TTATAA	1 cut(s)	764
Psp124BI	GAGCTC	1 cut(s)	321
Psp6I	CCWGG	4 cut(s)	289, 884, 964, 1364
PspCI	CACGTG	1 cut(s)	24
PspFI	CCCAGC	1 cut(s)	198
PspGI	CCWGG	4 cut(s)	289, 884, 964, 1364
PspN4I	GGNNCC	8 cut(s)	80, 148, 238, 802, 1106, 1107, 1108, 1122
PspOMI	GGGCCC	1 cut(s)	1105
PspPI	GGNCC	6 cut(s)	157, 196, 225, 1105, 1106, 1391
PsuI	RGATCY	2 cut(s)	646, 1120
RsaI	GTAC	1 cut(s)	585
RsaNI	GTAC	1 cut(s)	584
SacI	GAGCTC	1 cut(s)	321
SacII	CCGCGG	2 cut(s)	153, 340
SaqAI	TTAA	1 cut(s)	699
SatI	GCNGC	6 cut(s)	295, 325, 459, 471, 786, 789
Sau3AI	GATC	4 cut(s)	418, 646, 864, 1120
Sau96I	GGNCC	6 cut(s)	157, 196, 225, 1105, 1106, 1391
SchI	GAGTC	6 cut(s)	80, 314, 380, 945, 1202, 1384
ScrFI	CCNGG	7 cut(s)	218, 291, 300, 356, 886, 966, 1366
SduI	GDGCHC	5 cut(s)	81, 149, 321, 512, 1109
SfaNI	GCATC	4 cut(s)	445, 979, 1240, 1327
Sfr303I	CCGCGG	2 cut(s)	153, 340
SgrBI	CCGCGG	2 cut(s)	153, 340
SinI	GGWCC	2 cut(s)	157, 1391
SmlI	CTYRAG	1 cut(s)	1111
SmoI	CTYRAG	1 cut(s)	1111
Sse9I	AATT	6 cut(s)	395, 700, 780, 959, 1046, 1093
SseBI	AGGCCT	1 cut(s)	502
SspI	AATATT	1 cut(s)	466
SspMI	CTAG	4 cut(s)	431, 1166, 1395, 1399
SstI	GAGCTC	1 cut(s)	321
StuI	AGGCCT	1 cut(s)	502
StyD4I	CCNGG	7 cut(s)	216, 289, 298, 354, 884, 964, 1364
StyI	CCWWGG	3 cut(s)	267, 792, 1174
TaaI	ACNGT	2 cut(s)	37, 113
TaiI	ACGT	3 cut(s)	26, 415, 494
TaqI	TCGA	6 cut(s)	57, 87, 105, 120, 315, 954
TasI	AATT	6 cut(s)	395, 700, 780, 959, 1046, 1093
TatI	WGTACW	1 cut(s)	583
TauI	GCSGC	2 cut(s)	297, 327
TfiI	GAWTC	6 cut(s)	84, 445, 833, 1142, 1148, 1298
Tru1I	TTAA	1 cut(s)	699
Tru9I	TTAA	1 cut(s)	699
TscAI	CASTG	2 cut(s)	480, 640
TseFI	GTSAC	2 cut(s)	190, 1376
TseI	GCWGC	4 cut(s)	458, 470, 785, 788
Tsp45I	GTSAC	2 cut(s)	190, 1376
TspDTI	ATGAA	6 cut(s)	43, 563, 675, 825, 972, 1087
TspRI	CASTG	2 cut(s)	480, 640
VpaK11BI	GGWCC	2 cut(s)	157, 1391
XapI	RAATTY	2 cut(s)	959, 1093
XbaI	TCTAGA	1 cut(s)	430
XmnI	GAANNNNTTC	1 cut(s)	50
XspI	CTAG	4 cut(s)	431, 1166, 1395, 1399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.