Prupe.4G254800_v2.0.a1

Exosome complex

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
17612343 .. 17617131
4789 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G254800.3

Sequence Viewer

Length: 1374 bp
ATGGAGCAGAGATTAGCAAACACATGGCGCATGTCAGTGAACGAGAAGAAGTTCATCGAGACCGCTTTACTCTCCGACCTCCGAATCGATGGCCGTCGCCCCTTCGACTACCGTAACCTCACCATCAAGTTTGGCAAAGACGAGGGCTCGGCGGAGGTCCAGCTTGGCCAAACCCATGTAATGGCCTTCGTCACCGCCCAGCTTATCCAGCCTTACCGGGATAGGCCAAATGACGGCTCTCTCTCCATCTTCACCGAGTTCTCTCCAATGGCCGACCCCTCCTTTGAGCCTGGCCGCCCCGGTGAGTCTGCTGTTGAGCTGGGCCGCGTAATTGACCGAGGTCTTCGGGAAAGCAGGGCGGTTGATACAGAATCGCTTTGTGTTCTTTCGGGGAAGTTAGCATGGGCTATCCGTGTTGACCTCCATATTTTAGATAATGGAGGAAACCTTATTGATGCTGCTAATATTGCGGCATTGGCTGCTTTGTTGACTTTTCGGAGGCCTGAGTGCTCCGTGGGGGGAGAAGATGGTCAGGAAGTGATTGTTCATCCACCTGAGGAGAGGGAGCCACTTCATCTAATCATACACCATCTACCTATAGCAGTAACCTTTGCATTCTTCAGTTTCGAGAGCAGAGTGGTGATTGATCCAACCCATCATGAAGAGGCTGTTATGGGGGGACGAATGACTGCAACACTTAATGCAAATGGAGATGTTTGTGCCATTCAAAAAGCTGGAGGGGAGGGTGTCTTGCAGAGTGTTATAATGCAATGTTTGCGAATTGCCTCTGTCAAGGCTGGTGCTATGACAGAAAAGATAAAGAAGGCGGTTGATTCATACAACACAGAAAGAGCATTACGCAAGATCAAGCGCCATACTTCTTCTGACCCCATGGATGTTGATAGAGGTGCTTCTAATACAGGGGTGACACAAAACTCTTCTGTTTATCATATGGAGAGATTAAAGCCGGTTTCTGAGGAAGGCATTGCCAATCAAAGTGAGGATGTTGAAGGTGAAACTCAATTATCAGACAAAAGGCAAACTAACAAGGTTAATGATGCGAAGAATTTTATTGGGGGGCCCTCAAGTTGGGATCCATACTCAAAGGGTGTTGATTCGGATTTCTTAAAAGCTTCTCTAGCTTCCCATGGAATGTCAATGACTACTAAGAAACAAAACGACTCAAAAGGTGAGGAAACAACCAGCGGAGCCAAGCCAGAAGAACCTCCTGAAGATATTAATCCAAAACCTTCACCCATTAGGGCAGCTGAAACTGCAGAACAAACAAATGGAGAGAAAACCTTGAAGGATGCTGTGAAGCCCAAAAACAAAAGACCCAGGAGAAAGAATCGCTCCTCTACAGGTCCAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

458

Amino Acids

50.13

Weight (kDa)

6.18

Isoelectric Point (pI)

42.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 764
AccB7I CCANNNNNTGG 1 cut(s) 181
AccII CGCG 1 cut(s) 327
AciI CCGC 9 cut(s) 63, 152, 195, 295, 325, 359, 470, 827, 1206
AclWI GGATC 3 cut(s) 641, 1088, 1101
AcoI YGGCCR 4 cut(s) 91, 166, 270, 292
AcsI RAATTY 1 cut(s) 1066
AcuI CTGAAG 2 cut(s) 604, 1251
AfiI CCNNNNNNNGG 3 cut(s) 181, 233, 1089
AgsI TTSAA 3 cut(s) 728, 1010, 1306
AjnI CCWGG 2 cut(s) 289, 1337
AluBI AGCT 8 cut(s) 163, 202, 319, 734, 1133, 1142, 1268, 1371
AluI AGCT 8 cut(s) 163, 202, 319, 734, 1133, 1142, 1268, 1371
Alw21I GWGCWC 1 cut(s) 512
Alw26I GTCTC 1 cut(s) 53
AlwI GGATC 3 cut(s) 641, 1088, 1101
AoxI GGCC 9 cut(s) 91, 166, 183, 224, 270, 292, 322, 500, 1079
ApaI GGGCCC 1 cut(s) 1083
ApeKI GCWGC 3 cut(s) 458, 479, 1265
ApoI RAATTY 1 cut(s) 1066
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AseI ATTAAT 1 cut(s) 1239
Asp700I GAANNNNTTC 1 cut(s) 50
AspLEI GCGC 2 cut(s) 30, 873
AspS9I GGNCC 5 cut(s) 157, 322, 1079, 1080, 1364
AsuC2I CCSGG 2 cut(s) 218, 300
AsuHPI GGTGA 9 cut(s) 112, 184, 244, 314, 652, 937, 1025, 1202, 1245
AvaII GGWCC 2 cut(s) 157, 1364
AxyI CCTNAGG 1 cut(s) 555
BaeGI GKGCMC 1 cut(s) 1083
BalI TGGCCA 1 cut(s) 168
BamHI GGATCC 1 cut(s) 1093
BanII GRGCYC 2 cut(s) 149, 1083
BbsI GAAGAC 1 cut(s) 335
Bbv12I GWGCWC 1 cut(s) 512
BbvI GCAGC 3 cut(s) 445, 466, 1277
BccI CCATC 6 cut(s) 83, 131, 254, 521, 597, 663
BceAI ACGGC 2 cut(s) 78, 250
BciT130I CCWGG 2 cut(s) 291, 1339
BcnI CCSGG 2 cut(s) 218, 300
BcoDI GTCTC 1 cut(s) 53
BfaI CTAG 2 cut(s) 1139, 1372
BfmI CTRYAG 3 cut(s) 597, 1275, 1359
BfoI RGCGCY 1 cut(s) 874
BisI GCNGC 6 cut(s) 295, 325, 459, 471, 480, 1266
BlsI GCNGC 6 cut(s) 296, 326, 460, 472, 481, 1267
Bme1390I CCNGG 4 cut(s) 218, 291, 300, 1339
Bme18I GGWCC 2 cut(s) 157, 1364
BmgT120I GGNCC 5 cut(s) 157, 322, 1079, 1080, 1364
BmiI GGNNCC 5 cut(s) 567, 1080, 1081, 1095, 1210
BmrFI CCNGG 4 cut(s) 218, 291, 300, 1339
BmsI GCATC 3 cut(s) 445, 1048, 1300
BoxI GACNNNNGTC 1 cut(s) 339
BpiI GAAGAC 1 cut(s) 335
BpmI CTGGAG 1 cut(s) 756
BpuEI CTTGAG 1 cut(s) 1069
BpuMI CCSGG 2 cut(s) 218, 300
Bsa29I ATCGAT 1 cut(s) 87
BsaBI GATNNNNATC 1 cut(s) 1239
BsaI GGTCTC 1 cut(s) 53
BsaJI CCNNGG 6 cut(s) 298, 337, 513, 891, 1147, 1337
Bsc4I CCNNNNNNNGG 3 cut(s) 181, 233, 1089
Bse118I RCCGGY 1 cut(s) 967
Bse21I CCTNAGG 1 cut(s) 555
Bse3DI GCAATG 2 cut(s) 776, 984
Bse8I GATNNNNATC 1 cut(s) 1239
BseBI CCWGG 2 cut(s) 291, 1339
BseCI ATCGAT 1 cut(s) 87
BseDI CCNNGG 6 cut(s) 298, 337, 513, 891, 1147, 1337
BseGI GGATG 4 cut(s) 547, 901, 1009, 1315
BseJI GATNNNNATC 1 cut(s) 1239
BseLI CCNNNNNNNGG 3 cut(s) 181, 233, 1089
BseMI GCAATG 2 cut(s) 776, 984
BseMII CTCAG 3 cut(s) 495, 546, 966
BseRI GAGGAG 2 cut(s) 572, 1345
BseSI GKGCMC 1 cut(s) 1083
BseXI GCAGC 3 cut(s) 445, 466, 1277
BseYI CCCAGC 2 cut(s) 198, 319
Bsh1236I CGCG 1 cut(s) 327
BshFI GGCC 9 cut(s) 93, 168, 185, 226, 272, 294, 324, 502, 1081
BshVI ATCGAT 1 cut(s) 87
BsiHKAI GWGCWC 1 cut(s) 512
BsiSI CCGG 3 cut(s) 217, 300, 968
BslFI GGGAC 1 cut(s) 693
BslI CCNNNNNNNGG 3 cut(s) 181, 233, 1089
BsmAI GTCTC 1 cut(s) 53
BsmFI GGGAC 1 cut(s) 693
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 9 cut(s) 93, 168, 185, 226, 272, 294, 324, 502, 1081
Bso31I GGTCTC 1 cut(s) 53
Bsp120I GGGCCC 1 cut(s) 1079
Bsp1286I GDGCHC 3 cut(s) 149, 512, 1083
Bsp143I GATC 3 cut(s) 646, 864, 1093
Bsp19I CCATGG 2 cut(s) 891, 1147
BspACI CCGC 9 cut(s) 63, 152, 195, 295, 325, 359, 470, 827, 1206
BspANI GGCC 9 cut(s) 93, 168, 185, 226, 272, 294, 324, 502, 1081
BspCNI CTCAG 3 cut(s) 496, 547, 967
BspDI ATCGAT 1 cut(s) 87
BspFNI CGCG 1 cut(s) 327
BspHI TCATGA 1 cut(s) 658
BspLI GGNNCC 5 cut(s) 567, 1080, 1081, 1095, 1210
BspMAI CTGCAG 1 cut(s) 1279
BspPI GGATC 3 cut(s) 641, 1088, 1101
BspTNI GGTCTC 1 cut(s) 53
BsrDI GCAATG 2 cut(s) 776, 984
BsrFI RCCGGY 1 cut(s) 967
BssAI RCCGGY 1 cut(s) 967
BssECI CCNNGG 6 cut(s) 298, 337, 513, 891, 1147, 1337
BssMI GATC 3 cut(s) 646, 864, 1093
BssT1I CCWWGG 2 cut(s) 891, 1147
Bst2UI CCWGG 2 cut(s) 291, 1339
Bst4CI ACNGT 1 cut(s) 113
Bst6I CTCTTC 2 cut(s) 657, 943
BstAPI GCANNNNNTGC 2 cut(s) 479, 775
BstDEI CTNAG 4 cut(s) 504, 555, 975, 1167
BstDSI CCRYGG 3 cut(s) 513, 891, 1147
BstF5I GGATG 4 cut(s) 547, 901, 1009, 1315
BstFNI CGCG 1 cut(s) 327
BstH2I RGCGCY 1 cut(s) 874
BstHHI GCGC 2 cut(s) 30, 873
BstKTI GATC 3 cut(s) 649, 867, 1096
BstMAI GTCTC 1 cut(s) 53
BstMBI GATC 3 cut(s) 646, 864, 1093
BstMWI GCNNNNNNNGC 7 cut(s) 208, 467, 476, 479, 775, 1139, 1274
BstNI CCWGG 2 cut(s) 291, 1339
BstNSI RCATGY 1 cut(s) 34
BstPAI GACNNNNGTC 1 cut(s) 339
BstSCI CCNGG 4 cut(s) 216, 289, 298, 1337
BstSFI CTRYAG 3 cut(s) 597, 1275, 1359
BstSLI GKGCMC 1 cut(s) 1083
BstUI CGCG 1 cut(s) 327
BstV1I GCAGC 3 cut(s) 445, 466, 1277
BstV2I GAAGAC 1 cut(s) 335
BstX2I RGATCY 1 cut(s) 1093
BstYI RGATCY 1 cut(s) 1093
Bsu15I ATCGAT 1 cut(s) 87
Bsu36I CCTNAGG 1 cut(s) 555
BsuRI GGCC 9 cut(s) 93, 168, 185, 226, 272, 294, 324, 502, 1081
BsuTUI ATCGAT 1 cut(s) 87
BtgI CCRYGG 3 cut(s) 513, 891, 1147
BtsCI GGATG 4 cut(s) 547, 901, 1009, 1315
BtsIMutI CAGTG 1 cut(s) 42
CciI TCATGA 1 cut(s) 658
CfoI GCGC 2 cut(s) 30, 873
Cfr10I RCCGGY 1 cut(s) 967
Cfr13I GGNCC 5 cut(s) 157, 322, 1079, 1080, 1364
ClaI ATCGAT 1 cut(s) 87
CviAII CATG 7 cut(s) 24, 31, 176, 402, 659, 892, 1148
DdeI CTNAG 4 cut(s) 504, 555, 975, 1167
DpnI GATC 3 cut(s) 648, 866, 1095
DpnII GATC 3 cut(s) 646, 864, 1093
EaeI YGGCCR 4 cut(s) 91, 166, 270, 292
Eam1104I CTCTTC 2 cut(s) 657, 943
EarI CTCTTC 2 cut(s) 657, 943
EciI GGCGGA 1 cut(s) 167
Eco130I CCWWGG 2 cut(s) 891, 1147
Eco147I AGGCCT 1 cut(s) 502
Eco24I GRGCYC 2 cut(s) 149, 1083
Eco31I GGTCTC 1 cut(s) 53
Eco47I GGWCC 2 cut(s) 157, 1364
Eco57I CTGAAG 2 cut(s) 604, 1251
Eco81I CCTNAGG 1 cut(s) 555
EcoO109I RGGNCCY 2 cut(s) 1079, 1080
EcoRII CCWGG 2 cut(s) 289, 1337
EcoT14I CCWWGG 2 cut(s) 891, 1147
EcoT38I GRGCYC 2 cut(s) 149, 1083
ErhI CCWWGG 2 cut(s) 891, 1147
FaeI CATG 7 cut(s) 27, 34, 179, 405, 662, 895, 1151
FaqI GGGAC 1 cut(s) 693
FatI CATG 7 cut(s) 23, 30, 175, 401, 658, 891, 1147
FauNDI CATATG 1 cut(s) 951
Fnu4HI GCNGC 6 cut(s) 295, 325, 459, 471, 480, 1266
FokI GGATG 4 cut(s) 534, 908, 1016, 1322
FriOI GRGCYC 2 cut(s) 149, 1083
Fsp4HI GCNGC 6 cut(s) 295, 325, 459, 471, 480, 1266
FspBI CTAG 2 cut(s) 1139, 1372
GlaI GCGC 2 cut(s) 29, 872
GluI GCNGC 6 cut(s) 295, 325, 459, 471, 480, 1266
GsaI CCCAGC 2 cut(s) 202, 323
GsuI CTGGAG 1 cut(s) 756
HaeII RGCGCY 1 cut(s) 874
HaeIII GGCC 9 cut(s) 93, 168, 185, 226, 272, 294, 324, 502, 1081
HapII CCGG 3 cut(s) 217, 300, 968
HhaI GCGC 2 cut(s) 30, 873
Hin1II CATG 7 cut(s) 27, 34, 179, 405, 662, 895, 1151
Hin6I GCGC 2 cut(s) 28, 871
HinP1I GCGC 2 cut(s) 28, 871
HincII GTYRAC 2 cut(s) 418, 489
HindII GTYRAC 2 cut(s) 418, 489
HindIII AAGCTT 1 cut(s) 1131
HinfI GANTC 7 cut(s) 84, 305, 371, 833, 1115, 1181, 1348
HpaII CCGG 3 cut(s) 217, 300, 968
HphI GGTGA 9 cut(s) 112, 184, 244, 314, 652, 937, 1025, 1202, 1245
Hpy166II GTNNAC 3 cut(s) 40, 418, 489
Hpy188I TCNGA 7 cut(s) 76, 83, 498, 886, 976, 1030, 1120
Hpy188III TCNNGA 6 cut(s) 58, 347, 533, 628, 659, 1229
Hpy8I GTNNAC 3 cut(s) 40, 418, 489
Hpy99I CGWCG 1 cut(s) 99
HpyAV CCTTC 7 cut(s) 112, 196, 817, 974, 1004, 1260, 1300
HpyCH4III ACNGT 1 cut(s) 113
HpyCH4V TGCA 6 cut(s) 614, 692, 704, 754, 769, 1277
HpyF10VI GCNNNNNNNGC 7 cut(s) 208, 467, 476, 479, 775, 1139, 1274
HpyF3I CTNAG 4 cut(s) 504, 555, 975, 1167
Hsp92II CATG 7 cut(s) 27, 34, 179, 405, 662, 895, 1151
HspAI GCGC 2 cut(s) 28, 871
Kzo9I GATC 3 cut(s) 646, 864, 1093
LmnI GCTCC 5 cut(s) 4, 515, 565, 1208, 1358
Lsp1109I GCAGC 3 cut(s) 445, 466, 1277
LweI GCATC 3 cut(s) 445, 1048, 1300
MaeI CTAG 2 cut(s) 1139, 1372
MaeIII GTNAC 4 cut(s) 113, 190, 604, 925
MalI GATC 3 cut(s) 648, 866, 1095
MboI GATC 3 cut(s) 646, 864, 1093
MflI RGATCY 1 cut(s) 1093
MhlI GDGCHC 3 cut(s) 149, 512, 1083
MlsI TGGCCA 1 cut(s) 168
MluCI AATT 4 cut(s) 330, 780, 1022, 1066
MluNI TGGCCA 1 cut(s) 168
MlyI GAGTC 2 cut(s) 314, 1175
MmeI TCCRAC 2 cut(s) 99, 674
Mox20I TGGCCA 1 cut(s) 168
MroXI GAANNNNTTC 1 cut(s) 50
MscI TGGCCA 1 cut(s) 168
MseI TTAA 5 cut(s) 699, 962, 1053, 1127, 1239
MslI CAYNNNNRTG 1 cut(s) 35
Msp20I TGGCCA 1 cut(s) 168
MspA1I CMGCKG 2 cut(s) 1206, 1268
MspI CCGG 3 cut(s) 217, 300, 968
MspR9I CCNGG 4 cut(s) 218, 291, 300, 1339
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 2 cut(s) 291, 1339
MvnI CGCG 1 cut(s) 327
MwoI GCNNNNNNNGC 7 cut(s) 208, 467, 476, 479, 775, 1139, 1274
NciI CCSGG 2 cut(s) 218, 300
NcoI CCATGG 2 cut(s) 891, 1147
NdeI CATATG 1 cut(s) 951
NdeII GATC 3 cut(s) 646, 864, 1093
NlaIII CATG 7 cut(s) 27, 34, 179, 405, 662, 895, 1151
NlaIV GGNNCC 5 cut(s) 567, 1080, 1081, 1095, 1210
NmeAIII GCCGAG 1 cut(s) 128
NmuCI GTSAC 2 cut(s) 190, 925
NspI RCATGY 1 cut(s) 34
PagI TCATGA 1 cut(s) 658
PceI AGGCCT 1 cut(s) 502
PctI GAATGC 1 cut(s) 614
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 5 cut(s) 84, 371, 833, 1115, 1348
PflMI CCANNNNNTGG 1 cut(s) 181
PkrI GCNGC 6 cut(s) 296, 326, 460, 472, 481, 1267
PleI GAGTC 2 cut(s) 313, 1175
PpsI GAGTC 2 cut(s) 313, 1175
PshAI GACNNNNGTC 1 cut(s) 339
PshBI ATTAAT 1 cut(s) 1239
PsiI TTATAA 1 cut(s) 764
Psp6I CCWGG 2 cut(s) 289, 1337
PspFI CCCAGC 2 cut(s) 198, 319
PspGI CCWGG 2 cut(s) 289, 1337
PspN4I GGNNCC 5 cut(s) 567, 1080, 1081, 1095, 1210
PspOMI GGGCCC 1 cut(s) 1079
PspPI GGNCC 5 cut(s) 157, 322, 1079, 1080, 1364
PstI CTGCAG 1 cut(s) 1279
PsuI RGATCY 1 cut(s) 1093
PvuII CAGCTG 1 cut(s) 1268
RseI CAYNNNNRTG 1 cut(s) 35
SaqAI TTAA 5 cut(s) 699, 962, 1053, 1127, 1239
SatI GCNGC 6 cut(s) 295, 325, 459, 471, 480, 1266
Sau3AI GATC 3 cut(s) 646, 864, 1093
Sau96I GGNCC 5 cut(s) 157, 322, 1079, 1080, 1364
SchI GAGTC 2 cut(s) 314, 1175
ScrFI CCNGG 4 cut(s) 218, 291, 300, 1339
SduI GDGCHC 3 cut(s) 149, 512, 1083
SfaNI GCATC 3 cut(s) 445, 1048, 1300
SfcI CTRYAG 3 cut(s) 597, 1275, 1359
SinI GGWCC 2 cut(s) 157, 1364
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 1 cut(s) 1084
SmoI CTYRAG 1 cut(s) 1084
Sse9I AATT 4 cut(s) 330, 780, 1022, 1066
SseBI AGGCCT 1 cut(s) 502
SsiI CCGC 9 cut(s) 63, 152, 195, 295, 325, 359, 470, 827, 1206
SspI AATATT 1 cut(s) 466
SspMI CTAG 2 cut(s) 1139, 1372
StuI AGGCCT 1 cut(s) 502
StyD4I CCNGG 4 cut(s) 216, 289, 298, 1337
StyI CCWWGG 2 cut(s) 891, 1147
TaaI ACNGT 1 cut(s) 113
TaqI TCGA 4 cut(s) 57, 87, 105, 627
TaqII GACCGA 1 cut(s) 351
TasI AATT 4 cut(s) 330, 780, 1022, 1066
TauI GCSGC 3 cut(s) 297, 327, 473
TfiI GAWTC 5 cut(s) 84, 371, 833, 1115, 1348
Tru1I TTAA 5 cut(s) 699, 962, 1053, 1127, 1239
Tru9I TTAA 5 cut(s) 699, 962, 1053, 1127, 1239
TscAI CASTG 1 cut(s) 42
TseFI GTSAC 2 cut(s) 190, 925
TseI GCWGC 3 cut(s) 458, 479, 1265
Tsp45I GTSAC 2 cut(s) 190, 925
TspDTI ATGAA 5 cut(s) 43, 536, 563, 675, 825
TspGWI ACGGA 2 cut(s) 401, 502
TspRI CASTG 1 cut(s) 42
Van91I CCANNNNNTGG 1 cut(s) 181
VpaK11BI GGWCC 2 cut(s) 157, 1364
VspI ATTAAT 1 cut(s) 1239
XapI RAATTY 1 cut(s) 1066
XceI RCATGY 1 cut(s) 34
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 2 cut(s) 1139, 1372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.