RLG00000022789

Exosome complex

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0003830
Physical Location & Seq
Forward (+)
12230254 .. 12235465
5212 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022789

Sequence Viewer

Length: 1401 bp
ATGGAGCAGAGAATGGCGAACACGTGGCGGATGACGGTGAACGAGAAGAAGTTCATCGAGACGGCATTGGAGTCGGGGCTCCGAATCGACGGCCGGCGTCCCTTCGACTACCGTAAGCTCGAAATCAAGTTCGGGAAAGACGAGGGATCCGCGGAGGTCCACCTCGGCCAAACTCATGTGATGGCCTTCGTCACAGCCCAGCTCGTCCAACCCTACCGGGACAGACCCAATGACGGCACCCTCTCCATCTTCACCGAGTTCTCTCCCATGGCCGACCCTTCCTTTGAGCCTGGCCGCCCTGGCGAGTCCGCCGTCGAGCTTGGCCGCGTTATTGACCGCGGTCTCAGGGAGAGCCGGGCAGTTGATACAGAGTCGCTTTGTATTCTCTCTGGGAAATTAGTATGGGCTATACGTGTTGATCTCCACATTCTAGATAATGGAGGGAATCTTATTGATGCTGCTAATATTGCTGCACTGGCTGGTTTGTTGACGTTCCGGAGGCCTGAGTGCTCATTAGGGGGAGAAACCGGTCAGGAAGTCATTATACATCCACCCGAGGAGAGAGAGCCACTTCATCTAATAGTACATCATCTCCCTATTGCAGTAACTTTTGCATTCTTCAGTTATGAGAGCAGTGTGGTTATAGATCCAACCCACCATGAAGAGGCTGTTATGGGGGGACGAATGACCGCTACACTTAATTCTAATGGTGATGTTTGTGCCATTCAGAAGGCTGGGGGGGAGGCCATCTTGCAGAGTGTTATAATGCAATGTTTGCGAATTGCTGCTGCCAAGGCTGGTGCCATCTCAGATATGATAAAGAAAGAGGTTGATTCATATAACACAAAAAGAGCATTACTGAAGATCAAGCGTCATTCTACTCCCATGGATGTAGATAGAGGTGCTTCTGACATAGGACTGAAACAGAACTCCTCTGTTGACCAGATGAGAGTTGATGAATTTTCAGGGCATCATGGTCAGAGAATAAAGCAGGAGTGTGCGGAAGGCATTGCCAAGCAAAGCGGGGATGTTGAAAGTGAAACTAAATTGTCAGACAAAACGCAAACTAACAGGAGTAATGAGGATACAAAGAATTTCATTGGGGGCCCCTCAAGTTGGGATCCTTACTCTGTGGGTGTTGATTCAGATTCCTTGAAAGCTTCTCTAGTTTCCCAAGGTATGCCAATGCCTATTGAGAAACAAAAGGACTCAAAAGGTGAGGAAACAAGAAGTGAAGCCAAGCCAGAGGATGCTCCTGAAAATAACAATCCAAAGACTTCACCCCTTAGGGAAGTTGAATCTGCCGAACGAGCAAATGGAGAGAAAACCCTGAAGGATGCTGTAAAGGCGAAGAACAGGAAATCCAGGAGAAAGAGTCACTCCTCTTCTGGTCCTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000175 GO:0000176 GO:0000177 GO:0000178 GO:0000184 GO:0000288 GO:0000291 GO:0000459 GO:0000460 GO:0000466 GO:0000467 GO:0000469 GO:0000956 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004527 GO:0004532 GO:0004540 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006364 GO:0006396 GO:0006399 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008408 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010467 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016075 GO:0016078 GO:0016180 GO:0016787 GO:0016788 GO:0016796 GO:0016896 GO:0017091 GO:0019222 GO:0019439 GO:0022613 GO:0031123 GO:0031125 GO:0031974 GO:0031981 GO:0032991 GO:0034427 GO:0034470 GO:0034472 GO:0034473 GO:0034475 GO:0034476 GO:0034641 GO:0034655 GO:0034660 GO:0034661 GO:0042254 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043628 GO:0043632 GO:0043633 GO:0043634 GO:0043928 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0070013 GO:0070478 GO:0070481 GO:0070651 GO:0071025 GO:0071027 GO:0071028 GO:0071029 GO:0071035 GO:0071038 GO:0071042 GO:0071046 GO:0071047 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0090501 GO:0090503 GO:0097159 GO:0140098 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1902494 GO:1905354
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RNase_PH RNase_PH_C

Protein Analysis

467

Amino Acids

51.17

Weight (kDa)

6.06

Isoelectric Point (pI)

44.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNase_PH PF01138 37 - 168 4.6e-27 3' exoribonuclease family, domain 1
RNase_PH_C PF03725 197 - 263 4.1e-14 3' exoribonuclease family, domain 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 764
AccB1I GGYRCC 2 cut(s) 236, 800
AccII CGCG 3 cut(s) 152, 327, 339
AccIII TCCGGA 1 cut(s) 495
AclWI GGATC 5 cut(s) 141, 154, 641, 1115, 1128
AcoI YGGCCR 5 cut(s) 91, 166, 270, 292, 322
AcsI RAATTY 2 cut(s) 959, 1093
AcuI CTGAAG 3 cut(s) 604, 881, 1352
AcvI CACGTG 1 cut(s) 24
AcyI GRCGYC 1 cut(s) 97
AfaI GTAC 1 cut(s) 585
AfiI CCNNNNNNNGG 3 cut(s) 233, 664, 1116
AflIII ACRYGT 2 cut(s) 21, 412
AgeI ACCGGT 1 cut(s) 527
AgsI TTSAA 3 cut(s) 1034, 1156, 1298
AjnI CCWGG 3 cut(s) 289, 298, 1364
AloI GAACNNNNNNTCC 2 cut(s) 1346, 1378
AluBI AGCT 5 cut(s) 118, 202, 319, 1160, 1398
AluI AGCT 5 cut(s) 118, 202, 319, 1160, 1398
Alw21I GWGCWC 1 cut(s) 512
Alw26I GTCTC 2 cut(s) 53, 347
AlwI GGATC 5 cut(s) 141, 154, 641, 1115, 1128
Ama87I CYCGRG 1 cut(s) 554
Aor13HI TCCGGA 1 cut(s) 495
AoxI GGCC 9 cut(s) 91, 166, 183, 270, 292, 322, 500, 744, 1105
ApaI GGGCCC 1 cut(s) 1109
ApeKI GCWGC 4 cut(s) 458, 470, 785, 788
ApoI RAATTY 2 cut(s) 959, 1093
ArsI GACNNNNNNTTYG 2 cut(s) 266, 298
AsiGI ACCGGT 1 cut(s) 527
Asp700I GAANNNNTTC 1 cut(s) 50
AspS9I GGNCC 4 cut(s) 157, 1105, 1106, 1391
AsuC2I CCSGG 2 cut(s) 218, 356
AsuHPI GGTGA 5 cut(s) 49, 244, 722, 1229, 1272
AvaI CYCGRG 1 cut(s) 554
AvaII GGWCC 2 cut(s) 157, 1391
AxyI CCTNAGG 1 cut(s) 1286
BaeGI GKGCMC 1 cut(s) 1109
BamHI GGATCC 2 cut(s) 146, 1120
BanI GGYRCC 2 cut(s) 236, 800
BanII GRGCYC 2 cut(s) 81, 1109
BarI GAAGNNNNNNTAC 2 cut(s) 528, 560
BbrPI CACGTG 1 cut(s) 24
Bbv12I GWGCWC 1 cut(s) 512
BbvI GCAGC 4 cut(s) 445, 457, 772, 775
BccI CCATC 4 cut(s) 175, 254, 755, 812
BceAI ACGGC 4 cut(s) 78, 106, 250, 296
BcgI CGANNNNNNTGC 2 cut(s) 54, 88
BciT130I CCWGG 3 cut(s) 291, 300, 1366
BciVI GTATCC 1 cut(s) 1078
BcnI CCSGG 2 cut(s) 218, 356
BcoDI GTCTC 2 cut(s) 53, 347
BfaI CTAG 4 cut(s) 431, 1166, 1395, 1399
BfuI GTATCC 1 cut(s) 1078
BglI GCCNNNNNGGC 1 cut(s) 300
BisI GCNGC 6 cut(s) 295, 325, 459, 471, 786, 789
BlsI GCNGC 6 cut(s) 296, 326, 460, 472, 787, 790
Bme1390I CCNGG 5 cut(s) 218, 291, 300, 356, 1366
Bme18I GGWCC 2 cut(s) 157, 1391
BmeT110I CYCGRG 1 cut(s) 554
BmgT120I GGNCC 4 cut(s) 157, 1105, 1106, 1391
BmiI GGNNCC 8 cut(s) 80, 148, 238, 802, 1106, 1107, 1108, 1122
BmrFI CCNGG 5 cut(s) 218, 291, 300, 356, 1366
BmsI GCATC 4 cut(s) 445, 979, 1240, 1327
BoxI GACNNNNGTC 1 cut(s) 339
BpuEI CTTGAG 1 cut(s) 1096
BpuMI CCSGG 2 cut(s) 218, 356
BsaAI YACGTR 2 cut(s) 24, 413
BsaHI GRCGYC 1 cut(s) 97
BsaI GGTCTC 1 cut(s) 347
BsaJI CCNNGG 9 cut(s) 150, 163, 267, 298, 337, 555, 792, 885, 1174
BsaWI WCCGGW 2 cut(s) 495, 527
BsaXI ACNNNNNCTCC 4 cut(s) 576, 606, 1360, 1390
Bsc4I CCNNNNNNNGG 3 cut(s) 233, 664, 1116
Bse118I RCCGGY 2 cut(s) 93, 527
Bse1I ACTGG 1 cut(s) 480
Bse21I CCTNAGG 1 cut(s) 1286
Bse3DI GCAATG 2 cut(s) 776, 1008
BseAI TCCGGA 1 cut(s) 495
BseBI CCWGG 3 cut(s) 291, 300, 1366
BseDI CCNNGG 9 cut(s) 150, 163, 267, 298, 337, 555, 792, 885, 1174
BseGI GGATG 6 cut(s) 36, 547, 895, 1033, 1255, 1342
BseLI CCNNNNNNNGG 3 cut(s) 233, 664, 1116
BseMI GCAATG 2 cut(s) 776, 1008
BseMII CTCAG 3 cut(s) 358, 495, 822
BseNI ACTGG 1 cut(s) 480
BseRI GAGGAG 3 cut(s) 572, 922, 1372
BseSI GKGCMC 1 cut(s) 1109
BseX3I CGGCCG 1 cut(s) 91
BseXI GCAGC 4 cut(s) 445, 457, 772, 775
BseYI CCCAGC 2 cut(s) 198, 734
BsgI GTGCAG 1 cut(s) 456
Bsh1236I CGCG 3 cut(s) 152, 327, 339
Bsh1285I CGRYCG 1 cut(s) 94
BshFI GGCC 9 cut(s) 93, 168, 185, 272, 294, 324, 502, 746, 1107
BshNI GGYRCC 2 cut(s) 236, 800
BshTI ACCGGT 1 cut(s) 527
BsiEI CGRYCG 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 512
BsiHKCI CYCGRG 1 cut(s) 554
BsiSI CCGG 5 cut(s) 94, 217, 355, 496, 528
BslFI GGGAC 3 cut(s) 84, 233, 693
BslI CCNNNNNNNGG 3 cut(s) 233, 664, 1116
BsmAI GTCTC 2 cut(s) 53, 347
BsmBI CGTCTC 1 cut(s) 53
BsmFI GGGAC 3 cut(s) 84, 233, 693
BsmI GAATGC 1 cut(s) 614
BsnI GGCC 9 cut(s) 93, 168, 185, 272, 294, 324, 502, 746, 1107
Bso31I GGTCTC 1 cut(s) 347
BsoBI CYCGRG 1 cut(s) 554
Bsp120I GGGCCC 1 cut(s) 1105
Bsp1286I GDGCHC 3 cut(s) 81, 512, 1109
Bsp13I TCCGGA 1 cut(s) 495
Bsp143I GATC 5 cut(s) 146, 418, 646, 864, 1120
Bsp19I CCATGG 2 cut(s) 267, 885
BspANI GGCC 9 cut(s) 93, 168, 185, 272, 294, 324, 502, 746, 1107
BspCNI CTCAG 3 cut(s) 357, 496, 821
BspEI TCCGGA 1 cut(s) 495
BspFNI CGCG 3 cut(s) 152, 327, 339
BspLI GGNNCC 8 cut(s) 80, 148, 238, 802, 1106, 1107, 1108, 1122
BspPI GGATC 5 cut(s) 141, 154, 641, 1115, 1128
BspT107I GGYRCC 2 cut(s) 236, 800
BspTNI GGTCTC 1 cut(s) 347
BsrDI GCAATG 2 cut(s) 776, 1008
BsrFI RCCGGY 2 cut(s) 93, 527
BsrI ACTGG 1 cut(s) 480
BssAI RCCGGY 2 cut(s) 93, 527
BssECI CCNNGG 9 cut(s) 150, 163, 267, 298, 337, 555, 792, 885, 1174
BssMI GATC 5 cut(s) 146, 418, 646, 864, 1120
BssNI GRCGYC 1 cut(s) 97
BssT1I CCWWGG 4 cut(s) 267, 792, 885, 1174
Bst2UI CCWGG 3 cut(s) 291, 300, 1366
Bst4CI ACNGT 2 cut(s) 37, 113
Bst6I CTCTTC 2 cut(s) 657, 1390
BstACI GRCGYC 1 cut(s) 97
BstAPI GCANNNNNTGC 1 cut(s) 775
BstBAI YACGTR 2 cut(s) 24, 413
BstC8I GCNNGC 1 cut(s) 95
BstDEI CTNAG 4 cut(s) 344, 504, 808, 1286
BstDSI CCRYGG 4 cut(s) 150, 267, 337, 885
BstF5I GGATG 6 cut(s) 36, 547, 895, 1033, 1255, 1342
BstFNI CGCG 3 cut(s) 152, 327, 339
BstKTI GATC 5 cut(s) 149, 421, 649, 867, 1123
BstMAI GTCTC 2 cut(s) 53, 347
BstMBI GATC 5 cut(s) 146, 418, 646, 864, 1120
BstMCI CGRYCG 1 cut(s) 94
BstMWI GCNNNNNNNGC 7 cut(s) 300, 467, 476, 775, 794, 1310, 1346
BstNI CCWGG 3 cut(s) 291, 300, 1366
BstPAI GACNNNNGTC 1 cut(s) 339
BstSCI CCNGG 5 cut(s) 216, 289, 298, 354, 1364
BstSLI GKGCMC 1 cut(s) 1109
BstUI CGCG 3 cut(s) 152, 327, 339
BstV1I GCAGC 4 cut(s) 445, 457, 772, 775
BstX2I RGATCY 3 cut(s) 146, 646, 1120
BstYI RGATCY 3 cut(s) 146, 646, 1120
BstZI CGGCCG 1 cut(s) 91
Bsu36I CCTNAGG 1 cut(s) 1286
BsuI GTATCC 1 cut(s) 1078
BsuRI GGCC 9 cut(s) 93, 168, 185, 272, 294, 324, 502, 746, 1107
BtgI CCRYGG 4 cut(s) 150, 267, 337, 885
BtsCI GGATG 6 cut(s) 36, 547, 895, 1033, 1255, 1342
BtsI GCAGTG 1 cut(s) 640
BtsIMutI CAGTG 2 cut(s) 473, 640
Cac8I GCNNGC 1 cut(s) 95
Cfr10I RCCGGY 2 cut(s) 93, 527
Cfr13I GGNCC 4 cut(s) 157, 1105, 1106, 1391
Cfr42I CCGCGG 2 cut(s) 153, 340
CseI GACGC 2 cut(s) 86, 860
Csp6I GTAC 1 cut(s) 584
CspAI ACCGGT 1 cut(s) 527
CviAII CATG 5 cut(s) 176, 268, 659, 886, 974
CviQI GTAC 1 cut(s) 584
DdeI CTNAG 4 cut(s) 344, 504, 808, 1286
DpnI GATC 5 cut(s) 148, 420, 648, 866, 1122
DpnII GATC 5 cut(s) 146, 418, 646, 864, 1120
EaeI YGGCCR 5 cut(s) 91, 166, 270, 292, 322
EagI CGGCCG 1 cut(s) 91
Eam1104I CTCTTC 2 cut(s) 657, 1390
EarI CTCTTC 2 cut(s) 657, 1390
EciI GGCGGA 2 cut(s) 43, 298
EclXI CGGCCG 1 cut(s) 91
Eco130I CCWWGG 4 cut(s) 267, 792, 885, 1174
Eco147I AGGCCT 1 cut(s) 502
Eco24I GRGCYC 2 cut(s) 81, 1109
Eco31I GGTCTC 1 cut(s) 347
Eco47I GGWCC 2 cut(s) 157, 1391
Eco52I CGGCCG 1 cut(s) 91
Eco57I CTGAAG 3 cut(s) 604, 881, 1352
Eco72I CACGTG 1 cut(s) 24
Eco81I CCTNAGG 1 cut(s) 1286
Eco88I CYCGRG 1 cut(s) 554
EcoO109I RGGNCCY 2 cut(s) 1105, 1106
EcoRII CCWGG 3 cut(s) 289, 298, 1364
EcoT14I CCWWGG 4 cut(s) 267, 792, 885, 1174
EcoT38I GRGCYC 2 cut(s) 81, 1109
ErhI CCWWGG 4 cut(s) 267, 792, 885, 1174
Esp3I CGTCTC 1 cut(s) 53
FaeI CATG 5 cut(s) 179, 271, 662, 889, 977
FaqI GGGAC 3 cut(s) 84, 233, 693
FatI CATG 5 cut(s) 175, 267, 658, 885, 973
FauI CCCGC 1 cut(s) 1016
Fnu4HI GCNGC 6 cut(s) 295, 325, 459, 471, 786, 789
FokI GGATG 6 cut(s) 43, 534, 902, 1040, 1262, 1349
FriOI GRGCYC 2 cut(s) 81, 1109
Fsp4HI GCNGC 6 cut(s) 295, 325, 459, 471, 786, 789
FspBI CTAG 4 cut(s) 431, 1166, 1395, 1399
GluI GCNGC 6 cut(s) 295, 325, 459, 471, 786, 789
GsaI CCCAGC 2 cut(s) 202, 738
HaeIII GGCC 9 cut(s) 93, 168, 185, 272, 294, 324, 502, 746, 1107
HapII CCGG 5 cut(s) 94, 217, 355, 496, 528
HgaI GACGC 2 cut(s) 86, 860
Hin1I GRCGYC 1 cut(s) 97
Hin1II CATG 5 cut(s) 179, 271, 662, 889, 977
HincII GTYRAC 2 cut(s) 489, 940
HindII GTYRAC 2 cut(s) 489, 940
HindIII AAGCTT 1 cut(s) 1158
HpaII CCGG 5 cut(s) 94, 217, 355, 496, 528
HphI GGTGA 5 cut(s) 49, 244, 722, 1229, 1272
Hpy166II GTNNAC 4 cut(s) 40, 160, 489, 940
Hpy188I TCNGA 7 cut(s) 83, 729, 811, 910, 981, 1054, 1147
Hpy188III TCNNGA 6 cut(s) 58, 133, 431, 496, 533, 1256
Hpy8I GTNNAC 4 cut(s) 40, 160, 489, 940
Hpy99I CGWCG 2 cut(s) 92, 317
HpyAV CCTTC 6 cut(s) 112, 196, 288, 724, 998, 1327
HpyCH4III ACNGT 2 cut(s) 37, 113
HpyCH4IV ACGT 3 cut(s) 23, 412, 491
HpyCH4V TGCA 5 cut(s) 473, 602, 614, 754, 769
HpyF10VI GCNNNNNNNGC 7 cut(s) 300, 467, 476, 775, 794, 1310, 1346
HpyF3I CTNAG 4 cut(s) 344, 504, 808, 1286
HpySE526I ACGT 3 cut(s) 23, 412, 491
Hsp92I GRCGYC 1 cut(s) 97
Hsp92II CATG 5 cut(s) 179, 271, 662, 889, 977
Kpn2I TCCGGA 1 cut(s) 495
KroI GCCGGC 1 cut(s) 93
KroNI GCCGGC 1 cut(s) 95
KspI CCGCGG 2 cut(s) 153, 340
Kzo9I GATC 5 cut(s) 146, 418, 646, 864, 1120
LmnI GCTCC 3 cut(s) 4, 84, 1258
Lsp1109I GCAGC 4 cut(s) 445, 457, 772, 775
LweI GCATC 4 cut(s) 445, 979, 1240, 1327
MaeI CTAG 4 cut(s) 431, 1166, 1395, 1399
MaeII ACGT 3 cut(s) 23, 412, 491
MaeIII GTNAC 3 cut(s) 190, 604, 1376
MalI GATC 5 cut(s) 148, 420, 648, 866, 1122
MboI GATC 5 cut(s) 146, 418, 646, 864, 1120
MboII GAAGA 7 cut(s) 58, 241, 610, 674, 874, 1363, 1377
MflI RGATCY 3 cut(s) 146, 646, 1120
MhlI GDGCHC 3 cut(s) 81, 512, 1109
MluCI AATT 6 cut(s) 395, 700, 780, 959, 1046, 1093
MlyI GAGTC 5 cut(s) 80, 314, 380, 1202, 1384
MmeI TCCRAC 2 cut(s) 232, 674
MroI TCCGGA 1 cut(s) 495
MroNI GCCGGC 1 cut(s) 93
MroXI GAANNNNTTC 1 cut(s) 50
MseI TTAA 1 cut(s) 699
MspA1I CMGCKG 2 cut(s) 152, 339
MspI CCGG 5 cut(s) 94, 217, 355, 496, 528
MspR9I CCNGG 5 cut(s) 218, 291, 300, 356, 1366
Mva1269I GAATGC 1 cut(s) 614
MvaI CCWGG 3 cut(s) 291, 300, 1366
MvnI CGCG 3 cut(s) 152, 327, 339
MwoI GCNNNNNNNGC 7 cut(s) 300, 467, 476, 775, 794, 1310, 1346
NaeI GCCGGC 1 cut(s) 95
NciI CCSGG 2 cut(s) 218, 356
NcoI CCATGG 2 cut(s) 267, 885
NdeII GATC 5 cut(s) 146, 418, 646, 864, 1120
NgoMIV GCCGGC 1 cut(s) 93
NlaIII CATG 5 cut(s) 179, 271, 662, 889, 977
NlaIV GGNNCC 8 cut(s) 80, 148, 238, 802, 1106, 1107, 1108, 1122
NmeAIII GCCGAG 1 cut(s) 144
NmuCI GTSAC 2 cut(s) 190, 1376
PceI AGGCCT 1 cut(s) 502
PcsI WCGNNNNNNNCGW 1 cut(s) 138
PctI GAATGC 1 cut(s) 614
PdiI GCCGGC 1 cut(s) 95
PdmI GAANNNNTTC 1 cut(s) 50
PfeI GAWTC 6 cut(s) 84, 445, 833, 1142, 1148, 1298
PfoI TCCNGGA 1 cut(s) 1364
PinAI ACCGGT 1 cut(s) 527
PkrI GCNGC 6 cut(s) 296, 326, 460, 472, 787, 790
PleI GAGTC 5 cut(s) 79, 313, 379, 1202, 1383
PmaCI CACGTG 1 cut(s) 24
PmlI CACGTG 1 cut(s) 24
PpsI GAGTC 5 cut(s) 79, 313, 379, 1202, 1383
Ppu21I YACGTR 2 cut(s) 24, 413
PshAI GACNNNNGTC 1 cut(s) 339
PsiI TTATAA 1 cut(s) 764
Psp6I CCWGG 3 cut(s) 289, 298, 1364
PspCI CACGTG 1 cut(s) 24
PspFI CCCAGC 2 cut(s) 198, 734
PspGI CCWGG 3 cut(s) 289, 298, 1364
PspN4I GGNNCC 8 cut(s) 80, 148, 238, 802, 1106, 1107, 1108, 1122
PspOMI GGGCCC 1 cut(s) 1105
PspPI GGNCC 4 cut(s) 157, 1105, 1106, 1391
PsuI RGATCY 3 cut(s) 146, 646, 1120
RsaI GTAC 1 cut(s) 585
RsaNI GTAC 1 cut(s) 584
SacII CCGCGG 2 cut(s) 153, 340
SaqAI TTAA 1 cut(s) 699
SatI GCNGC 6 cut(s) 295, 325, 459, 471, 786, 789
Sau3AI GATC 5 cut(s) 146, 418, 646, 864, 1120
Sau96I GGNCC 4 cut(s) 157, 1105, 1106, 1391
SchI GAGTC 5 cut(s) 80, 314, 380, 1202, 1384
ScrFI CCNGG 5 cut(s) 218, 291, 300, 356, 1366
SduI GDGCHC 3 cut(s) 81, 512, 1109
SfaNI GCATC 4 cut(s) 445, 979, 1240, 1327
Sfr303I CCGCGG 2 cut(s) 153, 340
SgrBI CCGCGG 2 cut(s) 153, 340
SinI GGWCC 2 cut(s) 157, 1391
SmlI CTYRAG 1 cut(s) 1111
SmoI CTYRAG 1 cut(s) 1111
Sse9I AATT 6 cut(s) 395, 700, 780, 959, 1046, 1093
SseBI AGGCCT 1 cut(s) 502
SspI AATATT 1 cut(s) 466
SspMI CTAG 4 cut(s) 431, 1166, 1395, 1399
StuI AGGCCT 1 cut(s) 502
StyD4I CCNGG 5 cut(s) 216, 289, 298, 354, 1364
StyI CCWWGG 4 cut(s) 267, 792, 885, 1174
TaaI ACNGT 2 cut(s) 37, 113
TaiI ACGT 3 cut(s) 26, 415, 494
TaqI TCGA 5 cut(s) 57, 87, 105, 120, 315
TasI AATT 6 cut(s) 395, 700, 780, 959, 1046, 1093
TatI WGTACW 1 cut(s) 583
TauI GCSGC 2 cut(s) 297, 327
TfiI GAWTC 6 cut(s) 84, 445, 833, 1142, 1148, 1298
Tru1I TTAA 1 cut(s) 699
Tru9I TTAA 1 cut(s) 699
TscAI CASTG 2 cut(s) 480, 640
TseFI GTSAC 2 cut(s) 190, 1376
TseI GCWGC 4 cut(s) 458, 470, 785, 788
Tsp45I GTSAC 2 cut(s) 190, 1376
TspDTI ATGAA 6 cut(s) 43, 563, 675, 825, 972, 1087
TspRI CASTG 2 cut(s) 480, 640
VpaK11BI GGWCC 2 cut(s) 157, 1391
XapI RAATTY 2 cut(s) 959, 1093
XbaI TCTAGA 1 cut(s) 430
XmnI GAANNNNTTC 1 cut(s) 50
XspI CTAG 4 cut(s) 431, 1166, 1395, 1399
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.