MD11G1214500.v1.1

Rab3 GTPase-activating protein catalytic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0004994
Physical Location & Seq
Reverse (-)
31311528 .. 31318198
6671 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1214500.v1.1.491

Sequence Viewer

Length: 1995 bp
ATGGAGCCGCCCTCCTTTGTATCCAAAGCGAGGACCACCTTCCATTCCGCGGCGGCTAAAGCGGAGCGAGTTCTCTCTGACTTAAAGCCCGATCGAGATTCTGACAAGCAATCGCCGGGGAATTCGATCGATTACGCAGGTTACGAATCGCCGAGGGAGGAGGGAGAGTCAAAGGGCTCGAAAGAATTGAAGCATCTTGGGTGGAGACCACCGAACATAGGGACAAAGCAAGATTGGCAGGATAGATTTAGGAACATTGGAATAGGGAAGAAAGGAGGTGAAGATAACGAGAAGGCTGAGTATTCTTCCATGGCAGTTCCGTTTTATGATGAAAATTTGTATTTGCTGAACATGAAAAACGATACTGAAGCAAAGGGGGCAGAGATGATTCCATCAGTTGAAAGCTTGGTCTCAGACAACATTCTGATTCCTCCGTTTTCTGTTATGAGACAATTGGCTATAGCTGTTGAGGCTGGAAAGAAGTCCAAGTCATTGAAAGATTTTTTGGCGTCATCAGGGAGTTCCTCACCTGTCAGGGAGAGAGCGGGTCTGAGTCTATGTGCAGTGAAGTCATTAGTGCTTCGTGAAAAGGATGAAAAGCCATCTGATTTTTGTGATAACGAGAAGGTCCTACCGTTGATTCGGTCTCTATTTGATGCAGAGGGGAATTTTCTGAGAAGGAAGATTGATTCTGGTTCAGAGGCAGTTACTCCAACATCTTTGCCTAGAGTTATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAGTTAGCTGAAGTCATTGGGAGCTTCAGAACCCTCAAGAAAATGACTCTGTTTTGGTGCAGAGTTGTTGTTGAACTGAGAAGACTTTGGTCTGAAGAACAATATGTGCCTAGCATCCCCTTGGATGAGATTCCAGATCTGAATTCCTGTCTTTTGTATCAGCGGTTGCAAGTGATGAACTGTTGTGTTTCTAGGAAAAGGCGTCATGATATCGCCACTGAAAAATTAGACCTTGTAATAAGGGAAGCTAGTCCACATGCAGAAGAATCCGCTCTTTCCAAAGACAATCCTGCAGGCCCTATTTATGCTAGATTAAGCATGGGGGAACTTGTCCTCCGACTAGGTGCTAGTAGCCCATCCGGCGACCTAACAATGTTGGAAACTGGTGAACCTGTGTACTCCCCTGTGACCCAGGAAGGACCTTTGCTTACTGAAGATCTTATCAAGGAAAATGAGGAGTTTGTGCTTCGAACAGGAAGTGTTGGTGCTGGATGTTCTCAACTCCTCTCTGACATGCAGGCTTTCAAGGCTGCAAATCCTGGTTGTATTTTGGAAGACTTTGTGAGATGGCACTCTCCTCCTGACTGGACCGAGGCTGAGCCAAGTGATGAGGAAAATGACTCTTTTGTTGGTAGTGACGTATTGTCCACAAGAGGCTATCTCAGTAGCCGAATGCAAAAAGAAGGAAATTTGTGGCGTGAGTTTTGGGATACATCCAAACCAGTTCCAGCAGTTAAACAAGCACCCCTCTTTGATGAGGATTTAGCAGTGGAAGGTATCTTGGATGGTTTAGAGGACATATCACCTTCCGATCTTTTTCAGCAGCTGTTTGTTTCTTTGCTTGGTTTAGGATTTGTAATTGCTGAGGCTAAACTGTCCACGAGCAGTGATTTTTCGAAGCTGTTTTATGAATGCAAGGAATATGTTGTTTCCTCTTGTCAAAGCAACACCTGGACTGAGAAGGTTGAAGAGCTTTGCCAGGTATATGAAACAGTGGAGACTATGTTACTCAATCCAGAGGAAGCATTAAGAGCAATGAATCAGCCAGATGAATCGACAACCCCTTCTGGCGAACCAAAACGGCGGTTTAGGAGGCTTACCCTCAACTTTGGTGGCAAAGACAAGCAGTTGAGAAAAACAGCATCAAAGGACCAGAAAAACTCAACGAGCCCCAGTAGCCAACCGTTTTCGAGTTTCTTCGACAACAAGTCATCATTATTTTCCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BSD Rab3-GTPase_cat

Protein Analysis

665

Amino Acids

73.93

Weight (kDa)

5.09

Isoelectric Point (pI)

54.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rab3-GTPase_cat PF13890 368 - 520 3e-50 Rab3 GTPase-activating protein catalytic subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 128
AccBSI CCGCTC 2 cut(s) 545, 1037
AccII CGCG 1 cut(s) 50
AciI CCGC 9 cut(s) 8, 48, 50, 53, 62, 545, 928, 1035, 1849
AcsI RAATTY 5 cut(s) 121, 334, 667, 907, 1453
AcuI CTGAAG 5 cut(s) 387, 775, 795, 879, 1218
AcyI GRCGYC 2 cut(s) 509, 967
AfaI GTAC 1 cut(s) 1163
AfiI CCNNNNNNNGG 3 cut(s) 30, 49, 218
AgsI TTSAA 6 cut(s) 190, 401, 496, 839, 1291, 1733
AhdI GACNNNNNGTC 2 cut(s) 1408, 1972
AjnI CCWGG 4 cut(s) 1176, 1303, 1715, 1743
AjuI GAANNNNNNNTTGG 2 cut(s) 488, 520
AloI GAACNNNNNNTCC 2 cut(s) 1083, 1115
AluBI AGCT 8 cut(s) 405, 464, 773, 789, 1013, 1591, 1666, 1738
AluI AGCT 8 cut(s) 405, 464, 773, 789, 1013, 1591, 1666, 1738
Alw21I GWGCWC 1 cut(s) 745
Alw26I GTCTC 5 cut(s) 199, 415, 442, 651, 1757
AlwNI CAGNNNCTG 1 cut(s) 1591
AoxI GGCC 1 cut(s) 1060
ApeKI GCWGC 2 cut(s) 1295, 1588
ApoI RAATTY 5 cut(s) 121, 334, 667, 907, 1453
AspS9I GGNCC 6 cut(s) 33, 628, 1061, 1184, 1353, 1915
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 4 cut(s) 290, 519, 1163, 1560
AsuII TTCGAA 2 cut(s) 1234, 1661
AvaII GGWCC 5 cut(s) 33, 628, 1184, 1353, 1915
BanII GRGCYC 2 cut(s) 179, 1937
BauI CACGAG 1 cut(s) 1645
BbsI GAAGAC 2 cut(s) 853, 1326
Bbv12I GWGCWC 1 cut(s) 745
BbvCI CCTCAGC 1 cut(s) 1629
BbvI GCAGC 2 cut(s) 1282, 1600
BccI CCATC 5 cut(s) 400, 610, 1129, 1326, 1544
BceAI ACGGC 1 cut(s) 1862
BciT130I CCWGG 4 cut(s) 1178, 1305, 1717, 1745
BciVI GTATCC 2 cut(s) 31, 1468
BcnI CCSGG 1 cut(s) 117
BcoDI GTCTC 5 cut(s) 199, 415, 442, 651, 1757
BfaI CTAG 7 cut(s) 726, 876, 957, 1014, 1074, 1106, 1113
BfmI CTRYAG 2 cut(s) 459, 1056
BfuAI ACCTGC 1 cut(s) 128
BfuI GTATCC 2 cut(s) 31, 1468
BglI GCCNNNNNGGC 1 cut(s) 1125
BglII AGATCT 2 cut(s) 901, 1201
BisI GCNGC 5 cut(s) 8, 51, 54, 1296, 1589
BlpI GCTNAGC 1 cut(s) 1362
BlsI GCNGC 5 cut(s) 9, 52, 55, 1297, 1590
Bme1390I CCNGG 5 cut(s) 117, 1178, 1305, 1717, 1745
Bme18I GGWCC 5 cut(s) 33, 628, 1184, 1353, 1915
BmeRI GACNNNNNGTC 2 cut(s) 1408, 1972
BmgT120I GGNCC 6 cut(s) 33, 628, 1061, 1184, 1353, 1915
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 5 cut(s) 117, 1178, 1305, 1717, 1745
BmrI ACTGGG 1 cut(s) 1932
BmsI GCATC 4 cut(s) 202, 646, 888, 1916
BmuI ACTGGG 1 cut(s) 1932
BoxI GACNNNNGTC 1 cut(s) 853
BpiI GAAGAC 2 cut(s) 853, 1326
BplI GAGNNNNNCTC 3 cut(s) 28, 1410, 1442
Bpu10I CCTNAGC 1 cut(s) 1629
Bpu1102I GCTNAGC 1 cut(s) 1362
Bpu14I TTCGAA 2 cut(s) 1234, 1661
BpuEI CTTGAG 1 cut(s) 785
BpuMI CCSGG 1 cut(s) 117
Bsa29I ATCGAT 1 cut(s) 129
BsaHI GRCGYC 2 cut(s) 509, 967
BsaI GGTCTC 3 cut(s) 199, 415, 651
BsaJI CCNNGG 7 cut(s) 48, 116, 152, 309, 885, 1176, 1356
BsaXI ACNNNNNCTCC 6 cut(s) 152, 182, 1083, 1113, 1754, 1784
Bsc4I CCNNNNNNNGG 3 cut(s) 30, 49, 218
Bse1I ACTGG 4 cut(s) 1153, 1355, 1487, 1938
Bse3DI GCAATG 1 cut(s) 1806
BseBI CCWGG 4 cut(s) 1178, 1305, 1717, 1745
BseCI ATCGAT 1 cut(s) 129
BseDI CCNNGG 7 cut(s) 48, 116, 152, 309, 885, 1176, 1356
BseGI GGATG 7 cut(s) 598, 879, 895, 1121, 1262, 1478, 1555
BseLI CCNNNNNNNGG 3 cut(s) 30, 49, 218
BseMI GCAATG 1 cut(s) 1806
BseMII CTCAG 9 cut(s) 288, 426, 542, 665, 833, 1353, 1441, 1620, 1713
BseNI ACTGG 4 cut(s) 1153, 1355, 1487, 1938
BseRI GAGGAG 5 cut(s) 173, 735, 1235, 1259, 1332
BseXI GCAGC 2 cut(s) 1282, 1600
BsgI GTGCAG 2 cut(s) 582, 844
Bsh1236I CGCG 1 cut(s) 50
Bsh1285I CGRYCG 2 cut(s) 94, 129
BshFI GGCC 1 cut(s) 1062
BshVI ATCGAT 1 cut(s) 129
BsiEI CGRYCG 2 cut(s) 94, 129
BsiHKAI GWGCWC 1 cut(s) 745
BsiSI CCGG 2 cut(s) 116, 1125
BslFI GGGAC 1 cut(s) 235
BslI CCNNNNNNNGG 3 cut(s) 30, 49, 218
BsmAI GTCTC 5 cut(s) 199, 415, 442, 651, 1757
BsmFI GGGAC 1 cut(s) 235
BsmI GAATGC 2 cut(s) 1443, 1682
BsnI GGCC 1 cut(s) 1062
Bso31I GGTCTC 3 cut(s) 199, 415, 651
Bsp119I TTCGAA 2 cut(s) 1234, 1661
Bsp1286I GDGCHC 3 cut(s) 179, 745, 1937
Bsp143I GATC 5 cut(s) 91, 126, 901, 1201, 1576
Bsp1720I GCTNAGC 1 cut(s) 1362
Bsp19I CCATGG 1 cut(s) 309
BspACI CCGC 9 cut(s) 8, 48, 50, 53, 62, 545, 928, 1035, 1849
BspANI GGCC 1 cut(s) 1062
BspCNI CTCAG 9 cut(s) 289, 425, 543, 666, 834, 1354, 1440, 1621, 1714
BspDI ATCGAT 1 cut(s) 129
BspFNI CGCG 1 cut(s) 50
BspHI TCATGA 1 cut(s) 970
BspLI GGNNCC 1 cut(s) 6
BspMAI CTGCAG 1 cut(s) 1060
BspMI ACCTGC 1 cut(s) 128
BspQI GCTCTTC 1 cut(s) 1728
BspT104I TTCGAA 2 cut(s) 1234, 1661
BspTNI GGTCTC 3 cut(s) 199, 415, 651
BsrBI CCGCTC 2 cut(s) 545, 1037
BsrDI GCAATG 1 cut(s) 1806
BsrI ACTGG 4 cut(s) 1153, 1355, 1487, 1938
BssECI CCNNGG 7 cut(s) 48, 116, 152, 309, 885, 1176, 1356
BssMI GATC 5 cut(s) 91, 126, 901, 1201, 1576
BssNI GRCGYC 2 cut(s) 509, 967
BssSI CACGAG 1 cut(s) 1645
BssT1I CCWWGG 2 cut(s) 309, 885
Bst2BI CACGAG 1 cut(s) 1645
Bst2UI CCWGG 4 cut(s) 1178, 1305, 1717, 1745
Bst4CI ACNGT 5 cut(s) 636, 947, 1641, 1759, 1950
Bst6I CTCTTC 1 cut(s) 1728
BstACI GRCGYC 2 cut(s) 509, 967
BstBI TTCGAA 2 cut(s) 1234, 1661
BstC8I GCNNGC 2 cut(s) 1060, 1284
BstDEI CTNAG 9 cut(s) 297, 412, 551, 674, 842, 1362, 1427, 1629, 1722
BstDSI CCRYGG 2 cut(s) 48, 309
BstF5I GGATG 7 cut(s) 598, 879, 895, 1121, 1262, 1478, 1555
BstFNI CGCG 1 cut(s) 50
BstKTI GATC 5 cut(s) 94, 129, 904, 1204, 1579
BstMAI GTCTC 5 cut(s) 199, 415, 442, 651, 1757
BstMBI GATC 5 cut(s) 91, 126, 901, 1201, 1576
BstMCI CGRYCG 2 cut(s) 94, 129
BstMWI GCNNNNNNNGC 8 cut(s) 59, 235, 377, 470, 1125, 1292, 1796, 1941
BstNI CCWGG 4 cut(s) 1178, 1305, 1717, 1745
BstNSI RCATGY 2 cut(s) 1025, 1282
BstPAI GACNNNNGTC 1 cut(s) 853
BstSCI CCNGG 5 cut(s) 115, 1176, 1303, 1715, 1743
BstSFI CTRYAG 2 cut(s) 459, 1056
BstUI CGCG 1 cut(s) 50
BstV1I GCAGC 2 cut(s) 1282, 1600
BstV2I GAAGAC 2 cut(s) 853, 1326
BstX2I RGATCY 2 cut(s) 901, 1201
BstYI RGATCY 2 cut(s) 901, 1201
Bsu15I ATCGAT 1 cut(s) 129
BsuI GTATCC 2 cut(s) 31, 1468
BsuRI GGCC 1 cut(s) 1062
BsuTUI ATCGAT 1 cut(s) 129
BtgI CCRYGG 2 cut(s) 48, 309
BtsCI GGATG 7 cut(s) 598, 879, 895, 1121, 1262, 1478, 1555
BtsI GCAGTG 3 cut(s) 570, 1539, 1657
BtsIMutI CAGTG 5 cut(s) 570, 981, 1539, 1657, 1764
BveI ACCTGC 1 cut(s) 128
Cac8I GCNNGC 2 cut(s) 1060, 1284
CaiI CAGNNNCTG 1 cut(s) 1591
CciI TCATGA 1 cut(s) 970
Cfr13I GGNCC 6 cut(s) 33, 628, 1061, 1184, 1353, 1915
Cfr42I CCGCGG 1 cut(s) 51
ClaI ATCGAT 1 cut(s) 129
CseI GACGC 2 cut(s) 498, 956
Csp6I GTAC 1 cut(s) 1162
CspCI CAANNNNNGTGG 2 cut(s) 1858, 1893
CviAII CATG 7 cut(s) 310, 352, 737, 971, 1022, 1084, 1279
CviQI GTAC 1 cut(s) 1162
DdeI CTNAG 9 cut(s) 297, 412, 551, 674, 842, 1362, 1427, 1629, 1722
DpnI GATC 5 cut(s) 93, 128, 903, 1203, 1578
DpnII GATC 5 cut(s) 91, 126, 901, 1201, 1576
DriI GACNNNNNGTC 2 cut(s) 1408, 1972
Eam1104I CTCTTC 1 cut(s) 1728
Eam1105I GACNNNNNGTC 2 cut(s) 1408, 1972
EarI CTCTTC 1 cut(s) 1728
Eco130I CCWWGG 2 cut(s) 309, 885
Eco24I GRGCYC 2 cut(s) 179, 1937
Eco31I GGTCTC 3 cut(s) 199, 415, 651
Eco32I GATATC 1 cut(s) 976
Eco47I GGWCC 5 cut(s) 33, 628, 1184, 1353, 1915
Eco57I CTGAAG 5 cut(s) 387, 775, 795, 879, 1218
EcoO109I RGGNCCY 3 cut(s) 628, 1061, 1184
EcoRI GAATTC 2 cut(s) 121, 907
EcoRII CCWGG 4 cut(s) 1176, 1303, 1715, 1743
EcoRV GATATC 1 cut(s) 976
EcoT14I CCWWGG 2 cut(s) 309, 885
EcoT38I GRGCYC 2 cut(s) 179, 1937
ErhI CCWWGG 2 cut(s) 309, 885
FaeI CATG 7 cut(s) 313, 355, 740, 974, 1025, 1087, 1282
FaqI GGGAC 1 cut(s) 235
FatI CATG 7 cut(s) 309, 351, 736, 970, 1021, 1083, 1278
FauI CCCGC 1 cut(s) 538
Fnu4HI GCNGC 5 cut(s) 8, 51, 54, 1296, 1589
FokI GGATG 7 cut(s) 605, 866, 902, 1108, 1269, 1465, 1562
FriOI GRGCYC 2 cut(s) 179, 1937
Fsp4HI GCNGC 5 cut(s) 8, 51, 54, 1296, 1589
FspBI CTAG 7 cut(s) 726, 876, 957, 1014, 1074, 1106, 1113
GluI GCNGC 5 cut(s) 8, 51, 54, 1296, 1589
HaeIII GGCC 1 cut(s) 1062
HapII CCGG 2 cut(s) 116, 1125
HgaI GACGC 2 cut(s) 498, 956
Hin1I GRCGYC 2 cut(s) 509, 967
Hin1II CATG 7 cut(s) 313, 355, 740, 974, 1025, 1087, 1282
HindIII AAGCTT 1 cut(s) 403
HpaII CCGG 2 cut(s) 116, 1125
HphI GGTGA 4 cut(s) 290, 519, 1163, 1560
Hpy166II GTNNAC 5 cut(s) 1019, 1154, 1162, 1413, 1644
Hpy188III TCNNGA 8 cut(s) 95, 584, 749, 802, 899, 971, 1346, 1781
Hpy8I GTNNAC 5 cut(s) 1019, 1154, 1162, 1413, 1644
HpyCH4III ACNGT 5 cut(s) 636, 947, 1641, 1759, 1950
HpyCH4IV ACGT 1 cut(s) 1404
HpyF10VI GCNNNNNNNGC 8 cut(s) 59, 235, 377, 470, 1125, 1292, 1796, 1941
HpyF3I CTNAG 9 cut(s) 297, 412, 551, 674, 842, 1362, 1427, 1629, 1722
HpySE526I ACGT 1 cut(s) 1404
Hsp92I GRCGYC 2 cut(s) 509, 967
Hsp92II CATG 7 cut(s) 313, 355, 740, 974, 1025, 1087, 1282
KspI CCGCGG 1 cut(s) 51
Kzo9I GATC 5 cut(s) 91, 126, 901, 1201, 1576
LguI GCTCTTC 1 cut(s) 1728
LmnI GCTCC 4 cut(s) 4, 64, 748, 786
Lsp1109I GCAGC 2 cut(s) 1282, 1600
LweI GCATC 4 cut(s) 202, 646, 888, 1916
MaeI CTAG 7 cut(s) 726, 876, 957, 1014, 1074, 1106, 1113
MaeII ACGT 1 cut(s) 1404
MaeIII GTNAC 5 cut(s) 140, 706, 1171, 1400, 1770
MalI GATC 5 cut(s) 93, 128, 903, 1203, 1578
MbiI CCGCTC 2 cut(s) 545, 1037
MboI GATC 5 cut(s) 91, 126, 901, 1201, 1576
MfeI CAATTG 1 cut(s) 452
MflI RGATCY 2 cut(s) 901, 1201
MhlI GDGCHC 3 cut(s) 179, 745, 1937
MluCI AATT 9 cut(s) 121, 185, 334, 452, 667, 907, 989, 1453, 1623
MlyI GAGTC 4 cut(s) 176, 562, 805, 1379
MmeI TCCRAC 3 cut(s) 737, 1122, 1126
MseI TTAA 5 cut(s) 83, 765, 1079, 1500, 1793
MspA1I CMGCKG 3 cut(s) 50, 928, 1591
MspI CCGG 2 cut(s) 116, 1125
MspR9I CCNGG 5 cut(s) 117, 1178, 1305, 1717, 1745
MunI CAATTG 1 cut(s) 452
Mva1269I GAATGC 2 cut(s) 1443, 1682
MvaI CCWGG 4 cut(s) 1178, 1305, 1717, 1745
MvnI CGCG 1 cut(s) 50
MwoI GCNNNNNNNGC 8 cut(s) 59, 235, 377, 470, 1125, 1292, 1796, 1941
NciI CCSGG 1 cut(s) 117
NcoI CCATGG 1 cut(s) 309
NdeII GATC 5 cut(s) 91, 126, 901, 1201, 1576
NlaIII CATG 7 cut(s) 313, 355, 740, 974, 1025, 1087, 1282
NlaIV GGNNCC 1 cut(s) 6
NmeAIII GCCGAG 1 cut(s) 177
NmuCI GTSAC 2 cut(s) 1171, 1400
NspI RCATGY 2 cut(s) 1025, 1282
NspV TTCGAA 2 cut(s) 1234, 1661
PagI TCATGA 1 cut(s) 970
PciSI GCTCTTC 1 cut(s) 1728
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PctI GAATGC 2 cut(s) 1443, 1682
PkrI GCNGC 5 cut(s) 9, 52, 55, 1297, 1590
Ple19I CGATCG 2 cut(s) 94, 129
PleI GAGTC 4 cut(s) 175, 561, 805, 1379
PpsI GAGTC 4 cut(s) 175, 561, 805, 1379
PpuMI RGGWCCY 2 cut(s) 628, 1184
PshAI GACNNNNGTC 1 cut(s) 853
Psp5II RGGWCCY 2 cut(s) 628, 1184
Psp6I CCWGG 4 cut(s) 1176, 1303, 1715, 1743
PspGI CCWGG 4 cut(s) 1176, 1303, 1715, 1743
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 6 cut(s) 33, 628, 1061, 1184, 1353, 1915
PspPPI RGGWCCY 2 cut(s) 628, 1184
PstI CTGCAG 1 cut(s) 1060
PstNI CAGNNNCTG 1 cut(s) 1591
PsuI RGATCY 2 cut(s) 901, 1201
PvuI CGATCG 2 cut(s) 94, 129
PvuII CAGCTG 1 cut(s) 1591
RsaI GTAC 1 cut(s) 1163
RsaNI GTAC 1 cut(s) 1162
SacII CCGCGG 1 cut(s) 51
SapI GCTCTTC 1 cut(s) 1728
SaqAI TTAA 5 cut(s) 83, 765, 1079, 1500, 1793
SatI GCNGC 5 cut(s) 8, 51, 54, 1296, 1589
Sau3AI GATC 5 cut(s) 91, 126, 901, 1201, 1576
Sau96I GGNCC 6 cut(s) 33, 628, 1061, 1184, 1353, 1915
SbfI CCTGCAGG 1 cut(s) 1060
SchI GAGTC 4 cut(s) 176, 562, 805, 1379
ScrFI CCNGG 5 cut(s) 117, 1178, 1305, 1717, 1745
SdaI CCTGCAGG 1 cut(s) 1060
SduI GDGCHC 3 cut(s) 179, 745, 1937
SfaNI GCATC 4 cut(s) 202, 646, 888, 1916
SfcI CTRYAG 2 cut(s) 459, 1056
Sfr303I CCGCGG 1 cut(s) 51
SfuI TTCGAA 2 cut(s) 1234, 1661
SgrBI CCGCGG 1 cut(s) 51
SinI GGWCC 5 cut(s) 33, 628, 1184, 1353, 1915
SmlI CTYRAG 1 cut(s) 800
SmoI CTYRAG 1 cut(s) 800
Sse8387I CCTGCAGG 1 cut(s) 1060
Sse9I AATT 9 cut(s) 121, 185, 334, 452, 667, 907, 989, 1453, 1623
SsiI CCGC 9 cut(s) 8, 48, 50, 53, 62, 545, 928, 1035, 1849
SspMI CTAG 7 cut(s) 726, 876, 957, 1014, 1074, 1106, 1113
StyD4I CCNGG 5 cut(s) 115, 1176, 1303, 1715, 1743
StyI CCWWGG 2 cut(s) 309, 885
TaaI ACNGT 5 cut(s) 636, 947, 1641, 1759, 1950
TaiI ACGT 1 cut(s) 1407
TaqI TCGA 9 cut(s) 94, 125, 129, 179, 1234, 1661, 1820, 1955, 1965
TaqII GACCGA 2 cut(s) 633, 1370
TasI AATT 9 cut(s) 121, 185, 334, 452, 667, 907, 989, 1453, 1623
TatI WGTACW 1 cut(s) 1161
TauI GCSGC 3 cut(s) 10, 53, 56
Tru1I TTAA 5 cut(s) 83, 765, 1079, 1500, 1793
Tru9I TTAA 5 cut(s) 83, 765, 1079, 1500, 1793
TscAI CASTG 5 cut(s) 570, 988, 1539, 1657, 1764
TseFI GTSAC 2 cut(s) 1171, 1400
TseI GCWGC 2 cut(s) 1295, 1588
Tsp45I GTSAC 2 cut(s) 1171, 1400
TspDTI ATGAA 9 cut(s) 345, 368, 609, 725, 956, 1689, 1767, 1817, 1830
TspGWI ACGGA 2 cut(s) 309, 423
TspRI CASTG 5 cut(s) 570, 988, 1539, 1657, 1764
VpaK11BI GGWCC 5 cut(s) 33, 628, 1184, 1353, 1915
XapI RAATTY 5 cut(s) 121, 334, 667, 907, 1453
XceI RCATGY 2 cut(s) 1025, 1282
XspI CTAG 7 cut(s) 726, 876, 957, 1014, 1074, 1106, 1113
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.